CLUSTAL X (1.81) multiple sequence alignment input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GGCCGTGCATGATGTAGATGTGCAACTAATAACTAACTCTAAAAAGATAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GTTCGAATCAGAGTCATCGCAGTCAAAGGTGACATACCGCAAATTTTATG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CATGCATGGCCCACGATGATGCGATGCGTATGGTAGCAGCAGCTGCCTCT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------T reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 TGCTTCGCTTCCCTTCCATCCCCTTCCCTTCTTATACGCATGGAGAAGTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 TGCTTCGCTTCCCTTCCAT------------------------------- reverse_1283 -------------------------------------------------- forward_176 ------GCTTCCCTTCCATCCCCTTC------------------------ reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GAGTATGTGGTACTAGGGGTCCAACTTGATTGCTTCTTCCTAGCTCCTAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CTTCAGCTTTCACGACCGCCATGCCTGGCGGCTACTCCTCGATGATTCAC chr4A_267 ----------------CGCCATGCCCGGA---TACTCCTCGACAATTCAT chrUn_292 -----------------------------------------ATTATTCAT chr4A_295 --------------------------------------------ATTCAC chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSS---------S--SSSS-----------S------ forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GTTCTTCTTCTCCTTGCACTAT------TTCCACTCGCTGCAGCCCAGCT chr4A_267 GCTCTTGTGCTCCTCGCACTAA---TTATTCCGCTCGTCGTAGCACAGCC chrUn_292 GCTCTCCTGCTCCTCGTGCTAA---TT---CCGCTCGCCGCAGCACAGCC chr4A_295 GCTCTCCTGCTCCTCCTTGCGCTCGTT---CCGCTCGCCGCAGCACAGCC chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs -S------S-----S------S----------S-----S-----S----S forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 G---TGGCCGTTCTGCGGCAGCGGCCAAGGCACCTACTCGACAGGCAGCA chr4A_267 G---TGGCCGGTCTGCGGCAAAGACAGCT---ACTACTCGGCAGGCAGCA chrUn_292 G---TGGACCAACTGCGGCAGAGGCCAAGGCAACTACTCGGCAGGCAGCA chr4A_295 GACGTGGGCAAACTGCGGCAGAGGCCAAGGCAACTACTCGGCAGGCAGCA chr4A_356 --------------GCGGCAGAGGCCAAACCAACTACTCGGCTGGCAGCA chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs ----------S----------S----------S-------S--------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CATACCAGACCAACCTTCGAACA---CTCCTCGGCACGCTCCGCGGGAAC chr4A_267 CATACGAGAAGAACCTTGTGGA---CCTCCTCCGCATCCTCCGCCAGGAC chrUn_292 CATACGAGACCAATCTCCTAGACCTCCTCCTCGGCACCCTCTGCCATAAC chr4A_295 CATACGAGACCAACCTCGTATACCTCCTCC---GCATCCTCCGCTCGAAC chr4A_356 CATACGAGACCAACCTGCTAAACCTCCTCA---CCACCCTCCGCCAGAAC chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs -----S------------S--SS--------------S------SS---- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GCCTCCTCCTCGCCGTCTCGCTTTGCCTCGGGCAACTTCGGGGCCGTACC chr4A_267 GCCTACGACTCGCCCTACCTATTCGCCTCGGGCTCCCT-----------C chrUn_292 GCCTCCTCGTCGCCGACCCTATTCGCCAAAGGATCCCTCGGTGCCGCGCC chr4A_295 GCCTCCAACTCGCCCTCCCGATTCGCCTCCGGCGCCCACGGCGCCGCGCC chr4A_356 GCCTCCTCCTCGCCGTCCCTATTCGCCTCGGGCGCCCACGGCGCCGCGCC chr3B_487 ------------------------------------------------CC chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs -----------------S--S--S---------SS-S----S----SS-- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GGACACTGCCTGGGCTCTGGTTCTCTGCCGGGGCGACATCAGCGTCACCG chr4A_267 GGACACTGCCTGGGCCCTGGTTCTCTGCCGCGGCGACGTCAGCTCCTCCG chrUn_292 GGACACTGCCTGGGCCCTGATTCTCTGCCGAGGCGACGTCAGCGCCAAGA chr4A_295 GGACACTGCCTGGGCCCTGGTTCTCTGCCGTGGCGACGTCAGCGCCCCCG chr4A_356 GGACACTGCCTGGGCCCTGGTTCTCTGCCGCGGCGACGTCAGCGCCTCCG chr3B_487 GGCCACTGCCTGGGCCCTGGCTCTCTACCGCGTCGACGTCAGCGCCTCCG chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs ---------------S--------------S------S------S----- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 ACTGCTTCGACTGCGTCACCACGGCCAGTAGGGACGCGGAGAGAGCCTGC chr4A_267 ACTGCTACGACTGTGTCCACGGGGCCGATCGGGACGCGGCCACAGCCTGC chrUn_292 TGTGCTACGAATGCGTCACCTGGGCTGGTCACTACGCGGCCACAGCCTGC chr4A_295 ACTGCTACGACTGCGTCAGCACGGCCATTCGGGACGCGGCCACAGCCTGC chr4A_356 ACTGTTACGACTGCGTCACCTCCGCCCGTCGGGTGGCGGGAACAGCCTGC chr3B_487 ACTGCTACGACTGCGTCACCTCCCCGGGTCAGGACGCGGCCACAGCCTGC chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs ------S----------------------S---------SS-S------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 AACCGCAGCAGGGACGTGGGCCTCTTCTACAACGAGTGATACGTCCGCCT chr4A_267 AACCGCAGCAGGGACGTGGCCCTCTGCTACAACCACTGCTACGTTCACCT chrUn_292 AACCGCAGCAGGGACGTGGCCCTCTGCTGCGACCAGTGCTACGTCCGCCT chr4A_295 AACCGCAGCATGGACGTGGCCTTCTACTACAGCCCGTGCTACGTCCGCCT chr4A_356 AACAACAGCAGGGACGTGTCCCTCTGGTACGACCAGTGCTACGTCCGCCT chr3B_487 AACCGCAGCAGGGACGTTGGCCTCAGCTACGACCAGTGCTACGTCCGCCT chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs -------------------------S-------S----S----------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GG--------CCAACCACGACTTCCTGGACCCCACCGGCAACTCCGGCGA chr4A_267 AG--------CCAACCACGACTTCCTCGACCCCAGCAGCAGCTACTTGGA chrUn_292 AG--------CCGACCACAACTTCTTCGACCCCAACGGCAACGCCGGCGT chr4A_295 ATCCGACGT-----CCACGACTTTCTGGACCCCACCGGCAACTCCGGCGA chr4A_356 AACCAAGTAACCAACCACGACTTCC------------GCAACTCCGGCGA chr3B_487 AGCCAACC-----ACAACGACTTCCTCGACCCCAACGGCAACTCCGGCGA chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs S------------------------------------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GGTCCCTGTTAGCGACGGTCCCAACATAAGCAGCAAAGAAGTCGAC---- chr4A_267 GCTAAATGTCTTTAGTGGTCACAAAATCACCAGCAACGACGTCGACGGCT chrUn_292 GGTATCGTCCTTGAGCGCTCTAGGTATCACCAACGGGGACGTCGTCGGCT chr4A_295 GGTAGATCTCCTTACCGGCGCCGACATCATCAGCACCGACGTCCATGCCT chr4A_356 GGTACGTCTCGGCGACGGTATGGTCATAACCAGCAACGACGACGGCGGAT chr3B_487 GGTAAATCACTTTAGTGATCTCAAAATCACAAGCAACGACGTCGACGGCT chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs ---S-----SS------------------S------S--S---------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 -----CAGGCGGTCACCGCCCTTCTCAGCGCCACGGCGCAGTACGCGGTG chr4A_267 ACAACCGGGCGGTCACCGGCCTTCTCAGCGCCACGGTGCAGTATGCGGTG chrUn_292 ACGACTGGGCCCTCACTGGCCTGTTCAGCTCCACGGTGAAGTATGCGGTG chr4A_295 ACCAACAGGCGGTCACCGGCTTTCTCACCGCCACGGTGCAGTATGCTGTG chr4A_356 ACGACCAGGCGGTCACCAGCCTTCTCACCGCGACGGTGCAGTGTGCGGTG chr3B_487 ACAACCGCGCGGTCACCGGCCTTCTGAGCGCCACGGTGCAGTATGCCGTG chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs ------------------S-----------------S------S------ forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GACAACTCCTCAAGGCTAGTCGCCACGGGGCATTG----GGTAGGGCCCA chr4A_267 GACAACTCCGCCAGGCTCTTCGCCACGGGGCAATGCATGGGTAGGGCCCG chrUn_292 GACAACTCCTCCAGGATGTTCGCCATGGGGTATTC----GGCAGAGACCG chr4A_295 GACAACTCCTCCAGGCTCTTCGCCACGGGGCATTG----GGTAGGGCCCG chr4A_356 GACAACTCG---AGGCTGTTCGTGACAGGGC-------GGCTAGGGCCTG chr3B_487 GAAAACTCCACCAGGCTGTTCGCCACGGGGCAATG----GGTAGGGCCCG chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs -----------S-----SS------------------------------S forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 ACCCGGCGACCCAGAATATCTACTCGGCGGCGCAGTGCGCGGCGGACCTG chr4A_267 ACCCGGGGTTCCGCAATATCTACTCGGCGGCGCAGTGCGCGGCAGACCTG chrUn_292 AGCCGGGG---------ATCTACTCGGCGGCGCAGTGCGCGGCGGACCTG chr4A_295 A---------CCGCAATATGTACTCGGCGGCGCAGTGCGCACCGGACCTG chr4A_356 AACCAGGGTTCCGCAATATCTACTCGGCGGCGCAGTGCGCGGCCGACATG chr3B_487 ACCCGGGGTTCAGCAATATCTACTCGGCGGCGCAGTGCGCGGCGGATCTG chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs ------S-SS--SS------------------------------------ forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 TCGCCGCTGCAGTGCCGAAGCTGCCTCCAAGGCCTCCTGGGCAGGTGGTG chr4A_267 TCGCCGCCAGAGTGCCAGGGGTGCCTACAACGCCAACTGGCCATGTGGTC chrUn_292 TCGCGGCCGCAGTGCCGAAACTGCCTACAAGGCCTCATGGGCATGTGGCG chr4A_295 TCGCCGGCGCAGTGCCGAAACTGCCTGCAACGCCTCGTGGGCAAGTGGTG chr4A_356 TCGCCGCCGCGGTGCCGAAACTGCCTACAAAGCATCCTGGACAGGAGGTC chr3B_487 TCGCCGATGCAGTGCCGAAGCTGCCTCCAGGGCCTTGTGGGCAAGTGGTG chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs -------------------------------------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GACCACGTTCCCGCAGAGCGGGC---AGAGCGCCAGGATTGCTGGTCCGC chr4A_267 GACCAAGTTCCACGACGGGGTA---GAGGGCGGGAGGATGGCTGGTCCGC chrUn_292 GACCACGTTCCTGCGGAACACGC---GGGGCGCGAGGCTGGCTGGTCC-- chr4A_295 GACCACGTTCCCCCACTTGGATTTGGAGGGCGCCAGCATCGCTGGTCCAC chr4A_356 GACC---------------------------------------------- chr3B_487 GTCCACCTTCTCGCGGGACGTGAT---GGCCGCGAGGCTGGCTGGTCCGC chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs --------------------S-------S----------S---------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ------------------------------------ATGGCAGCGCCATG chr6B_1_TraesCS6B01G002500 GGTGCACCCTACGGTCCCAGCTGACCCCCTTCTACAATGGCAGCGCCATG chr4A_267 GCTGCACCTTGAGGTCCGAATTGAACCACTTCTACTATGGCGACGCGATG chrUn_292 -------------------------------------------------- chr4A_295 GCTGCACCTTGAGGTACCAAGTGTCCCCGTTCTACATTGGCAGCGCCATG chr4A_356 -------------------------------------------------- chr3B_487 GGTGTACCTTGAGGTCCGAATTGGACCAGTTCTACAATGGCGACGCGATG chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs --------S-SS-------SS----------------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTCCTGTTGCCCACGACGGCACCAACGGCTGCAACCAGAGGTCAGTTTTT chr6B_1_TraesCS6B01G002500 GTCCTGTTGCCCACGACGGCACCAACGGCTGCAACCAGAGGTCAGTTTTT chr4A_267 CTCCTGTTGCCCAC------------------------------------ chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 CTCCTGTTGCCGAC------------------------------------ chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTTTTTGTTTTTGTTTTTTGTTTTTTTGGGAAATAACCAGAGGTCAGTTG chr6B_1_TraesCS6B01G002500 GTTTTTGTTTTTGTTTTTTGTTTTTTTGGGAAATAACCAGAGGTCAGTTG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTTACCAACCATTAGATTATACATTGTTTTGGAAAGTAGAATCCCTTCAA chr6B_1_TraesCS6B01G002500 CTTACCAACCATTAGATTATACATTGTTTTGGAAAGTAGAATCCCTTCAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CGAATTAGATTATACATTGTTTTGGAAAGATTAATTTTGAATTTGGTTAT chr6B_1_TraesCS6B01G002500 CGAATTAGATTATACATTGTTTTGGAAAGATTAATTTTGAATTTGGTTAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAAATATTCTAATATTTTGTTATGGATAGGTGCCACACAAGCAAACGGAA chr6B_1_TraesCS6B01G002500 AAAATATTCTAATATTTTGTTATGGATAGGTGCCACACAAGCAAACGGAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 --------------------------------CCACACAAGCAAACGGAA forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 --------------------------------CCACACAAGCAAACGGAA reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GGGTAAAATTGGTTACTATTAGTAGTCATTCTAGCCTTTCGAAATAGAAA chr6B_1_TraesCS6B01G002500 GGGTAAAATTGGTTACTATTAGTAGTCATTCTAGCCTTTCGAAATAGAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 GG------------------------------------------------ forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 GG------------------------------------------------ reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GACAGTATTAACAAGAAAGAACTGAACTAAACAAATTAGATTATACATAT chr6B_1_TraesCS6B01G002500 GACAGTATTAACAAGAAAGAACTGAACTAAACAAATTAGATTATACATAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TCACTACAGGAAAATCCTGATTTCCCGTGTGCTAGCATATAAGCCGAGAG chr6B_1_TraesCS6B01G002500 TCACTACAGGAAAATCCTGATTTCCCGTGTGCTAGCATATAAGCCGAGAG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 TCACTACAGGAAAATCCTGATTTCCCGTGTGTTAACATATAAGCTGAGAG chr2D_1366 -CACTACAGGAAAATCCTGATTTCCCGTGTGCTAGCATATAAGCCGAGAG chr2B_1366 -CACTACAGGAAAATCCTGATTTCCCGTGTGTTAGTCTATAAGCCGAGAG chr3A_1918 -------------------------------------------------- SNPs -------------------------------------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTATTTTTCGGGCACTCGGCTTATGTTCCTATAAGCCGAGTCCTGGTAAA chr6B_1_TraesCS6B01G002500 CTATTTTTCGGGCACTCGGCTTATGTTCCTATAAGCCGAGTCCTGGTAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 CTATTTTTCGGGTACTCGGCTTATCTTACTC-AAGCCGAGTCTGGATAAA chr2D_1366 CTATTTTTCGGGTACTCGGCTTATGTTCCTCTAAGCCGAGTCCGGGTATA chr2B_1366 CTATTTTTCGGGCACTCGGCTTATGTTACTCTAAGCCGAGTCTGAATAAA chr3A_1918 -------------------------------------------------- SNPs ------------------------------S------------S------ forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAAACACCCGGCAAACCATAAGTACTCGGCTTCTGGCCATATATAAGCCG chr6B_1_TraesCS6B01G002500 AAAACACCCGGCAAACCATAAGTACTCGGCTTCTGGCCATATATAAGCCG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 AAAACACCCGGCAAATTCTAAGGACTCGGCTTATGGCCATATATAGGCCG chr2D_1366 AAAACACCCGGCAAATCCTAAGTACTCGGCTTATGGCCATATATAAGCCG chr2B_1366 AAAACACCCGGCAAATTCTAAGGACTCGACTTATGGCCATATATAGGCCG chr3A_1918 -------------------------------------------------- SNPs ---------------S-S--------------S----------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AGTGTAA-AACAAGGCTCTCGGCTTATATGAAACACACGGTATCTACGG- chr6B_1_TraesCS6B01G002500 AGTGTAA-AACAAGGCTCTCGGCTTATATGAAACACACGGTATCTACGG- chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 AGTGTTGCAAAAAGGCTCTCGGCTTATATAAAACACACGGTATCTACTG- chr2D_1366 AGTGTTGAAAAAAGGCTCTCGACTTATATGAAACACACGGTATCTACGGA chr2B_1366 ATTGTTACAAAAAGGCTCTCGGCTTATATAAAACACACGGTATATACTG- chr3A_1918 -------------------------------------------------- SNPs -----S----S--------------------------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAAAAGGCACCCGGCTTATAGTCCGCACTCGGCAAATAAAACTGCCACGT chr6B_1_TraesCS6B01G002500 AAAAAGGCACCCGGCTTATAGTCCGCACTCGGCAAATAAAACTGCCACGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 AAAAAGGCACCCGGCTTACAGCTCGCACTCGGCAAATACAACTGCCACGT chr2D_1366 AAAAAGGCACCCGGCTTATAGCCCGCACTCGGCAAATACAACTGCCACGT chr2B_1366 AAAAAGGCACCCGGCTTACAGCCCGCACTCGGCAAATAGAACTGCCACGT chr3A_1918 -------------------------------------------------- SNPs ---------------------S----------------S----------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTCTGCAACGAAGCGGGCTGACGGCACCGTCATGGAGCAGCCTATAAGCC chr6B_1_TraesCS6B01G002500 GTCTGCAACGAAGCGGGCTGACGGCACCGTCATGGAGCAGCCTATAAGCC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 GTCCACAACAGAGCGGACCGACGGCGCCATCACGGAGCAGCCTATAAGCC chr2D_1366 GTCTGCAACAAAGCGGACTGACGGCGCCATCTCGGAGCAGCCTATAAGCC chr2B_1366 GTCTACAACGGAGCGGACCGACGGCGCCGTCACGGAGCAGCCTATAAGCC chr3A_1918 -------------------------------------------------- SNPs ----------------S--------S------S----------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTGTGCCTTGCGATAGCACTCGGCTTACACGGGTATATAAGCCGTGTGCC chr6B_1_TraesCS6B01G002500 GTGTGCCTTGCGATAGCACTCGGCTTACACGGGTATATAAGCCGTGTGCC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 GTGTGCCCTGCGGTAGCACTCGGCGTATA-GGGTATATAAGCCGTGTGCC chr2D_1366 GTGTGCTCTGCGATAGCACTCGGCTTACAC-GGTATATAAGCCGTGTGCC chr2B_1366 GTGTGCCCTGCGGTAGCACTCGGCGTATA-GTGTATATAAGCCGTGTGCC chr3A_1918 -------------------------------------------------- SNPs -------S------------------------------------------ forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTGCTATAGTACTCGGCGTACATGGTATATAAGCCGAGAGCCCTGTTACA chr6B_1_TraesCS6B01G002500 CTGCTATAGTACTCGGCGTACATGGTATATAAGCCGAGAGCCCTGTTACA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 CTGCGATAGTACTCGGCGTATAGGGTGTTTAAGTCGTGTGCCATTTTACA chr2D_1366 CTGCTATAGTACTCGGCGTATATGGTATATAAGCCGAGAGCCCTGTTATA chr2B_1366 CTGCGATAGTACTCGGCGTATAGGGTGTATAAGTCGTGTGCCATGTTACA chr3A_1918 -------------------------------------------------- SNPs --------------------S----------------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GCACTCGGATTATGATGTATATAAGCCGTGTGCCCAATGAAAGAAGTGTG chr6B_1_TraesCS6B01G002500 GCACTCGGATTATGATGTATATAAGCCGTGTGCCCAATGAAAGAAGTGTG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 GCACTCGGCTTATAAGGTATATAAGCCGTGTGCCCAATGCAA-AAGTGTG chr2D_1366 GCACTCGGCTTAGGAGGTATATAAGCCATGTGCCCAGTGAAAGAAGTGTG chr2B_1366 GCACTCGGCTTATAAGGTATATAAGCCGTGTGCCCAATGCAA-AAGTGTG chr3A_1918 -------------------------------------------------- SNPs --------S------S---------------------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GCTTATATTTTTGCGACCCACGACATTTATATGAAATTGATTTAAAATGA chr6B_1_TraesCS6B01G002500 GCTTATATTTTTGCGACCCACGACATTTATATGAAATTGATTTAAAATGA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 GCTTTT-TTTTTGCGACCCACGACAATTATGTGAAATTGATTTAAAATGG chr2D_1366 GCTTATATTTTTGCGACCCACGACATTTATGTGAAATTGATTTAAAATGA chr2B_1366 GCTTTT-TTTTGCGA---CACGACATTTATGTGAAATTGATTTAAAATGA chr3A_1918 -------------------------------------------------- SNPs ------------------------------S------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTTTCATTGCATTTAT--TTACTACTTAATTTTTTTCTCA-TAATTTTCT chr6B_1_TraesCS6B01G002500 TTTTCATTGCATTTAT--TTACTACTTAATTTTTTTCTCA-TAATTTTCT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 TTTTCATTGCATTTATCTTTACTACTTAATTTTTTTCTCACTAATTTTCT chr2D_1366 TTTTCATTGCATTTATCTTTACTACTTATTT------------------- chr2B_1366 TTTTCATTGCATTTATCTTTACTATTTAATTTTTTTCTCACTAATTTTCT chr3A_1918 -------------------------------------------------- SNPs -------------------------------------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TCCGGCTAGTTTACTGAAAAAGGCTTTCGCCCCGCTTTATATATAACGCA chr6B_1_TraesCS6B01G002500 TCCGGCTAGTTTACTGAAAAAGGCTTTCGCCCCGCTTTATATATAACGCA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 TCCTACTAGTTT-------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 TCCTACTAGTTT-------------------------------------- chr3A_1918 --------GTTTACCGAAAAAGGCTTTCGCCCCGCTTTATATATAAAACA SNPs ---SS---------S-------------------------------SS-- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CCAACCAACATCCGAGCCGATACAAATGACAACACACCACACCAACACGC chr6B_1_TraesCS6B01G002500 CCAACCAACATCCGAGCCGATACAAATGACAACACACCACACCAACACGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 CCAACCAACATCCGAGCCGATACAAATGACAACACGCCACACCAACACAC SNPs -----------------------------------S------------S- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACCCAAGGCCAGATACATAGGTGCCAAGAG-----------------CCT chr6B_1_TraesCS6B01G002500 ACCCAAGGCCAGATACATAGGTGCCAAGAG-----------------CCT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 ACCCAAGGCCAGATACATAGGTGCCACCACCACCACCACCACCACCACCA SNPs --------------------------SS-S-------------------S forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACAACAACA--AACACACCGAACGACTCGAAGTAGACTAAACAAGGACTG chr6B_1_TraesCS6B01G002500 ACAACAACA--AACACACCGAACGACTCGAAGTAGACTAAACAAGGACTG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 ACAACAACAACAACACACCATACGACTCAAAGTAGACTAAACAATGACTA SNPs -------------------SS-------S---------------S----S forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TAAGCAACACTACGGAGCCGCCGGAGCCCTTCACGGTAAGGATACCACGA chr6B_1_TraesCS6B01G002500 TAAGCAACACTACGGAGCCGCCGGAGCCCTTCACGGTAAGGATACCACGA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 TAAGCAACACTATGGAGCCGCTGGAGCCCTTCACAGTGAAGATACCACGA SNPs ------------S--------S------------S--S-S---------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AGAGGTGAAGTTGAGAGTCGACGAACCGTGAGCTCCAAGACAGTGCCTTC chr6B_1_TraesCS6B01G002500 AGAGGTGAAGTTGAGAGTCGACGAACCGTGAGCTCCAAGACAGTGCCTTC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 AGAGGTGAAGCTGAGAGTCGACGAACCATGAGCTCCAAGACAGTGCCTTC SNPs ----------S----------------S---------------------- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 ----------TTGAGAGTCGACGAACCGTG-------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AGGAAGGATACAACACCGAAGCGCCGCCACCGCCCGATCCAAAGATCTAG chr6B_1_TraesCS6B01G002500 AGGAAGGATACAACACCGAAGCGCCGCCACCGCCCGATCCAAAGATCTAG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 AGGAAGGATACAACACCGAAGCGCCGCCACCGCCCGATCCAAAGATTTAG SNPs ----------------------------------------------S--- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ATTTCATC-CGGAGCACGGCGAAGGGAAAGGAGCAACCACAACGGAGACT chr6B_1_TraesCS6B01G002500 ATTTCATC-CGGAGCACGGCGAAGGGAAAGGAGCAACCACAACGGAGACT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 ATTTTCATTCGGAGCATGACGAAGGAAAAGGAGCAACCACAACGGAGACT SNPs ----SSSS--------S-S------S------------------------ forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TCAGGAAGATGACGACGACCACGGACGCCGCCTCCGTCGGCCCGGCCAAA chr6B_1_TraesCS6B01G002500 TCAGGAAGATGACGACGACCACGGACGCCGCCTCCGTCGGCCCGGCCAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 TTAGAAAGATGACGACGACCACGGGCGCCGCCTCCGTCGGCCCGGCCAAT SNPs -S--S-------------------S------------------------S forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GCCAGGCGGGATTTTCACCACGGCAATCATACTCCGCCTTCACCCAAGGT chr6B_1_TraesCS6B01G002500 GCCAGGCGGGATTTTCACCACGGCAATCATACTCCGCCTTCACCCAAGGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 GCCAGGCAGGATTTTCACCCCGGCAATCATACTCCGCCTTCGCCTAAGGT SNPs -------S-----------S---------------------S--S----- forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GCCGCCAGGCACAAGACCTAACAGCGGCTGGACTATAATCCGAGTATAGC chr6B_1_TraesCS6B01G002500 GCCGCCAGGCACAAGACCTAACAGCGGCTGGACTATAATCCGAGTATAGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 GCCGCCAGGCACAAGACCCTAA---------------------------- SNPs ------------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AGGAGTTGGCACTCGGTTTACATAAAAACCGTGCGGCTCATTTTGGCACT chr6B_1_TraesCS6B01G002500 AGGAGTTGGCACTCGGTTTACATAAAAACCGTGCGGCTCATTTTGGCACT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CGGTTTATATAAAAACCGTGTCGCCTAAGCAGGCACTCGGTTTATATTAA chr6B_1_TraesCS6B01G002500 CGGTTTATATAAAAACCGTGTCGCCTAAGCAGGCACTCGGTTTATATTAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GCTGTGCTTCTCATTTGGGCACTCGGTTTAGAGATAAAACGTGTAGCTCT chr6B_1_TraesCS6B01G002500 GCTGTGCTTCTCATTTGGGCACTCGGTTTAGAGATAAAACGTGTAGCTCT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACCCAGCACTCAGTTTAGATATAAACCGTGTGGCTCCATTAGGTACTCGG chr6B_1_TraesCS6B01G002500 ACCCAGCACTCAGTTTAGATATAAACCGTGTGGCTCCATTAGGTACTCGG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -----------------------AACCGTGTGGCTCCATTAGG------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTTATAGAGACGGTGACACGTGGCCGTTATCTCCCGGCTACCGTCATGTT chr6B_1_TraesCS6B01G002500 TTTATAGAGACGGTGACACGTGGCCGTTATCTCCCGGCTACCGTCATGTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACTTTAGTAAGCCGAGAGCCTTGTATAAACACACGGCGTAAATAGAAACC chr6B_1_TraesCS6B01G002500 ACTTTAGTAAGCCGAGAGCCTTGTATAAACACACGGCGTAAATAGAAACC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GAGTGTTTTTGTGCAGGCACTCGGCTTATACTTCATAAGCCGATGGAGTG chr6B_1_TraesCS6B01G002500 GAGTGTTTTTGTGCAGGCACTCGGCTTATACTTCATAAGCCGATGGAGTG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TAAGCCGTGTCATATAAGCCGGGAGTTTTACCCGGCTTATATATAAACCG chr6B_1_TraesCS6B01G002500 TAAGCCGTGTCATATAAGCCGGGAGTTTTACCCGGCTTATATATAAACCG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 --AGCCGTGTCATATAAGCCGG---------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 --AGCCGTGTCATATAAGCCGG---------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TGTTCATATCAATATAAGCTGAGTGTATTGGGTACACGGCTTTAAAGTTT chr6B_1_TraesCS6B01G002500 TGTTCATATCAATATAAGCTGAGTGTATTGGGTACACGGCTTTAAAGTTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTTCCTGTAGTGATTTTTGGAAACCTTAATTTTGAATCCGGTTTTTATGG chr6B_1_TraesCS6B01G002500 TTTCCTGTAGTGATTTTTGGAAACCTTAATTTTGAATCCGGTTTTTATGG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTAGACCATCTCCACATACGCCCAAAAAAAACCGGCGCGCTAAAATATTT chr6B_1_TraesCS6B01G002500 TTAGACCATCTCCACATACGCCCAAAAAAAACCGGCGCGCTAAAATATTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTACAGTGCCATTTTAGTAATTTTAGCCTGCCGTGACCAGTCCAGCAGGC chr6B_1_TraesCS6B01G002500 TTACAGTGCCATTTTAGTAATTTTAGCCTGCCGTGACCAGTCCAGCAGGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GCACAAAAATATAGCGGGCAACGGACAGCGCACAAAAGTCCAGCCGACGC chr6B_1_TraesCS6B01G002500 GCACAAAAATATAGCGGGCAACGGACAGCGCACAAAAGTCCAGCCGACGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 --------ATATAGCGGGCAACGGACAG---------------------- reverse_5068 -------------------------------------------------- forward_3143 -----------------------GACAGCGCACAAAAGTCCAG------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACTAAAAAATAAAGCGCCACAACAACAAACAAGTCCCTAACATTTACAAA chr6B_1_TraesCS6B01G002500 ACTAAAAAATAAAGCGCCACAACAACAAACAAGTCCCTAACATTTACAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -----------AAGCGCCACAACAACAAACA------------------- reverse_5075 -------------------------------------------------- forward_3182 ------------AGCGCCACAACAACAAACAA------------------ reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TAAGTCCATTTGACCAAAACAAAAACGCAATAGATCCCCAAAAGTTGGAG chr6B_1_TraesCS6B01G002500 TAAGTCCATTTGACCAAAACAAAAACGCAATAGATCCCCAAAAGTTGGAG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CAAACTAGCCTTTAGAAATTAGAAACACTTTCAAATAATTCAACTAAAAA chr6B_1_TraesCS6B01G002500 CAAACTAGCCTTTAGAAATTAGAAACACTTTCAAATAATTCAACTAAAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AATTATATTGTACATATTTTTTGAAAGATTAATTTTGAATTCGGTTATTA chr6B_1_TraesCS6B01G002500 AATTATATTGTACATATTTTTTGAAAGATTAATTTTGAATTCGGTTATTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AATATTCCAAATGTTTTTTTATGACTAGAAGCCACAAGAAGTTAGAATTG chr6B_1_TraesCS6B01G002500 AATATTCCAAATGTTTTTTTATGACTAGAAGCCACAAGAAGTTAGAATTG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TAAAATTGGTTATATTCTACATCCGATCAATATTACTAGTCACAGCTTAA chr6B_1_TraesCS6B01G002500 TAAAATTGGTTATATTCTACATCCGATCAATATTACTAGTCACAGCTTAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTATAACTTTAGCATAAACTGGTACTAAATCTTGGGGAAATAGTATGAAT chr6B_1_TraesCS6B01G002500 GTATAACTTTAGCATAAACTGGTACTAAATCTTGGGGAAATAGTATGAAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CGGAGGGACTAGAATTTTGTACCTCTTGAGTTATGCTTGTTGAACATTAC chr6B_1_TraesCS6B01G002500 CGGAGGGACTAGAATTTTGTACCTCTTGAGTTATGCTTGTTGAACATTAC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTATTTCAACTCGCATAATATCTTTTATATTATATTATTACAACTGAACT chr6B_1_TraesCS6B01G002500 TTATTTCAACTCGCATAATATCTTTTATATTATATTATTACAACTGAACT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CATCCCTATACTCTAAAATATACTTCTTTTTTTTGCGAATACTCTAAAAT chr6B_1_TraesCS6B01G002500 CATCCCTATACTCTAAAATATACTTCTTTTTTTTGCGAATACTCTAAAAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ATACTTCGTCCATATACATTATAATGGTTGAAATTAAAAGATCTAAAATT chr6B_1_TraesCS6B01G002500 ATACTTCGTCCATATACATTATAATGGTTGAAATTAAAAGATCTAAAATT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TATGTAAACATATGACATTCCAAACCAGTCAATTTTTTTTACCAGCTGAC chr6B_1_TraesCS6B01G002500 TATGTAAACATATGACATTCCAAACCAGTCAATTTTTTTTACCAGCTGAC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACGTACAATACAACCATTTGTAAGTGTCGGACAACAAATCAATCAGGCGT chr6B_1_TraesCS6B01G002500 ACGTACAATACAACCATTTGTAAGTGTCGGACAACAAATCAATCAGGCGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 ----------------------------------CAAATCAATCAGGCGT forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CGCCTAGAAGTTGCTTATTTAAATATATACGATGCCATGATTATGTCATG chr6B_1_TraesCS6B01G002500 CGCCTAGAAGTTGCTTATTTAAATATATACGATGCCATGATTATGTCATG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 CGCC---------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTGATGTCACAGAACTGAAAAAGATGTTACAATGGCAATGCTCCTTATTT chr6B_1_TraesCS6B01G002500 CTGATGTCACAGAACTGAAAAAGATGTTACAATGGCAATGCTCCTTATTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTACGCTATCCATTTCAATCGATACTGCGTGTATGTTTTGACCAGAAAAT chr6B_1_TraesCS6B01G002500 GTACGCTATCCATTTCAATCGATACTGCGTGTATGTTTTGACCAGAAAAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TAACATTTTACAAATCCATAATATGTGTAAAAAATATATTTTGTAACTAA chr6B_1_TraesCS6B01G002500 TAACATTTTACAAATCCATAATATGTGTAAAAAATATATTTTGTAACTAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AATTCAATATTAAATGGTGTAATATGTTATCATCAAATTGAAACCTAGTT chr6B_1_TraesCS6B01G002500 AATTCAATATTAAATGGTGTAATATGTTATCATCAAATTGAAACCTAGTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TACTTTTGAAAGCGACTTCTATAAGAATTTATCAACTTGTATGTGGTTTT chr6B_1_TraesCS6B01G002500 TACTTTTGAAAGCGACTTCTATAAGAATTTATCAACTTGTATGTGGTTTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTATATATAGGAAAAATGCATCCTACTACCAGGTGTAGCTACACCCGTTT chr6B_1_TraesCS6B01G002500 GTATATATAGGAAAAATGCATCCTACTACCAGGTGTAGCTACACCCGTTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTCATATACTATCATGTGGTAGTATATAGTCTACTTTATTATTTTTAGTA chr6B_1_TraesCS6B01G002500 CTCATATACTATCATGTGGTAGTATATAGTCTACTTTATTATTTTTAGTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TGTTCATATACTATATCTAAGATACTCCCAAGTGATTTGTATGAAAAAAT chr6B_1_TraesCS6B01G002500 TGTTCATATACTATATCTAAGATACTCCCAAGTGATTTGTATGAAAAAAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TGCAAGTGAGGTCATAATTTTATTGTATTTGTGAAATACGTACATATTTA chr6B_1_TraesCS6B01G002500 TGCAAGTGAGGTCATAATTTTATTGTATTTGTGAAATACGTACATATTTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TACGTGAAATAGAGTATGCGCAAAATATGATACATACTACCAAAAAAATA chr6B_1_TraesCS6B01G002500 TACGTGAAATAGAGTATGCGCAAAATATGATACATACTACCAAAAAAATA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTATATATACTACCTAAACATTCTTATATACTACATACTACGTGTACATA chr6B_1_TraesCS6B01G002500 GTATATATACTACCTAAACATTCTTATATACTACATACTACGTGTACATA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTCTCCGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 CTCTCCGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 NNNNNNNNNNNNNNNNNNNNNNNNAAATTCAATAAATGAGCCGCGACATC chr6B_1_TraesCS6B01G002500 NNNNNNNNNNNNNNNNNNNNNNNNAAATTCAATAAATGAGCCGCGACATC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AGCAGTTACCGAAATTTGAGAGACAACCAATCATGTCAAATATGATAAGT chr6B_1_TraesCS6B01G002500 AGCAGTTACCGAAATTTGAGAGACAACCAATCATGTCAAATATGATAAGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAATTCAATTATTCCAAATAATGCATGTCCATTAGTACGACGGGGACATG chr6B_1_TraesCS6B01G002500 AAATTCAATTATTCCAAATAATGCATGTCCATTAGTACGACGGGGACATG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACCAGAAAAGGACAAACCACGTTGAGAGTGAGTGGGACATAATGCTTTAT chr6B_1_TraesCS6B01G002500 ACCAGAAAAGGACAAACCACGTTGAGAGTGAGTGGGACATAATGCTTTAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 ----------------CCACGTTGAGAGTGAGTGGG-------------- forward_3128 -------------------------------------------------- reverse_5068 -----------------CACGTTGAGAGTGAGTGGGA------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------CGTTGAGAGTGAGTGGGACA----------- forward_3181 -------------------------------------------------- reverse_5075 ------------------------AGAGTGAGTGGGACATAATGCT---- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 ----------------CCACGTTGAGAGTGAGTGGG-------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TATGCATATGGATAGGTGAATATAATGCACTAGATTAATAAGTGAAAGGA chr6B_1_TraesCS6B01G002500 TATGCATATGGATAGGTGAATATAATGCACTAGATTAATAAGTGAAAGGA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAAATTAGAAAGAGCATCGACAACACTAAAAAACTAAACGCATCGACAAC chr6B_1_TraesCS6B01G002500 AAAATTAGAAAGAGCATCGACAACACTAAAAAACTAAACGCATCGACAAC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 ------AGAAAGAGCATCGACAACACT----------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACTCCCAGCAATGTAGGTGGTGGAGAAATCATGTATCACTTTTTGACACG chr6B_1_TraesCS6B01G002500 ACTCCCAGCAATGTAGGTGGTGGAGAAATCATGTATCACTTTTTGACACG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AGCAATATATATTTAGCTTAAATAGCACATGTTCTTTATTCTGTATACTA chr6B_1_TraesCS6B01G002500 AGCAATATATATTTAGCTTAAATAGCACATGTTCTTTATTCTGTATACTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AATGACCTGCTTAAAAATAGAAATATTCAGAGTAAAATTTATAAGAGAAA chr6B_1_TraesCS6B01G002500 AATGACCTGCTTAAAAATAGAAATATTCAGAGTAAAATTTATAAGAGAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTTTTATTAGGATGATAAATAATAATTCACCCTTCTTTACATAGGAAATT chr6B_1_TraesCS6B01G002500 CTTTTATTAGGATGATAAATAATAATTCACCCTTCTTTACATAGGAAATT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GGAATTGGACAGTCTGAGAAATAGGTCATTTGTTTTATTCTACAGGTGGA chr6B_1_TraesCS6B01G002500 GGAATTGGACAGTCTGAGAAATAGGTCATTTGTTTTATTCTACAGGTGGA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TCAAGAATACAACTCAATTTGGTATACTGAGATTGGAGTAATAAGGAAGG chr6B_1_TraesCS6B01G002500 TCAAGAATACAACTCAATTTGGTATACTGAGATTGGAGTAATAAGGAAGG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAAAATACGCCAGAACTAATAAATAAAAGAAAATAAGGATATTCTTTTTA chr6B_1_TraesCS6B01G002500 AAAAATACGCCAGAACTAATAAATAAAAGAAAATAAGGATATTCTTTTTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ATCGAAAAAAATATGTATTCTTTTTCATATGCTCATGGTTTGTTGAAAAA chr6B_1_TraesCS6B01G002500 ATCGAAAAAAATATGTATTCTTTTTCATATGCTCATGGTTTGTTGAAAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTCTGGGCTGTCATGATATATCATGTTTACATCCAATTGTTTTCTAAAAA chr6B_1_TraesCS6B01G002500 TTCTGGGCTGTCATGATATATCATGTTTACATCCAATTGTTTTCTAAAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AACAATGGGAATTTCCTATGATATTAGATATCTAGACATCGGATTGCAAG chr6B_1_TraesCS6B01G002500 AACAATGGGAATTTCCTATGATATTAGATATCTAGACATCGGATTGCAAG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAGTTTCTCTCCTTAGATGAAGAACACTATTATGTTCTTCGGCTAATTTT chr6B_1_TraesCS6B01G002500 AAGTTTCTCTCCTTAGATGAAGAACACTATTATGTTCTTCGGCTAATTTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTACTAGCAATGAGCCATGCTTTTATTAAACTAATAAAGCTAGGTCAGCT chr6B_1_TraesCS6B01G002500 GTACTAGCAATGAGCCATGCTTTTATTAAACTAATAAAGCTAGGTCAGCT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CGGTATTATTTTTTAACGCAGACAGTCTAAATCATGCACCTCAAGCAATT chr6B_1_TraesCS6B01G002500 CGGTATTATTTTTTAACGCAGACAGTCTAAATCATGCACCTCAAGCAATT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CCACGACTAATAAGCCAGACATTAATCCAATTATCACCAATCATTTAGTT chr6B_1_TraesCS6B01G002500 CCACGACTAATAAGCCAGACATTAATCCAATTATCACCAATCATTTAGTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GGATCAGGACACCTTGTGGCATCTCACCTATAATGCAGTCAACATCATTT chr6B_1_TraesCS6B01G002500 GGATCAGGACACCTTGTGGCATCTCACCTATAATGCAGTCAACATCATTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -GATCAGGACACCTTGTGGCA----------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTCTCGTTCGATGTCTGCCTGCCTACAAAACATTTACACTGTTTATATTT chr6B_1_TraesCS6B01G002500 GTCTCGTTCGATGTCTGCCTGCCTACAAAACATTTACACTGTTTATATTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TGCAGGAAGCCACTAGTTAATGATAATGATGTAGAGACATTCTTTTATTC chr6B_1_TraesCS6B01G002500 TGCAGGAAGCCACTAGTTAATGATAATGATGTAGAGACATTCTTTTATTC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAAATAGAGAAATATGTCTATACATAAAATTTTAAAGAGAAATTTCTCAA chr6B_1_TraesCS6B01G002500 AAAATAGAGAAATATGTCTATACATAAAATTTTAAAGAGAAATTTCTCAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AAGCTCACTCTAGGTGCAACTTGCTCCTCTATCTAACCAACTAAAGCCCA chr6B_1_TraesCS6B01G002500 AAGCTCACTCTAGGTGCAACTTGCTCCTCTATCTAACCAACTAAAGCCCA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CATTGACCAGATGATTATAATTATAGGCTCATGAGTTATGGAAACAAGCC chr6B_1_TraesCS6B01G002500 CATTGACCAGATGATTATAATTATAGGCTCATGAGTTATGGAAACAAGCC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TCATAGAGTTATAATCGCAAAAAAGAGGGTCGCAGAAAAGCCTTAATAAA chr6B_1_TraesCS6B01G002500 TCATAGAGTTATAATCGCAAAAAAGAGGGTCGCAGAAAAGCCTTAATAAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TAAAATAAGCCTCAATAAAGTAAGTGTCTCAAATAAAGTATTTACAATTT chr6B_1_TraesCS6B01G002500 TAAAATAAGCCTCAATAAAGTAAGTGTCTCAAATAAAGTATTTACAATTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GAATTTGGCATTATTCACCCAGTTTTTTGTTTCTCAATGCACGACTGTAT chr6B_1_TraesCS6B01G002500 GAATTTGGCATTATTCACCCAGTTTTTTGTTTCTCAATGCACGACTGTAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTGGTTTTGAAACTTAATGACAGATTAATATTCTTGCTTGAATATCCACA chr6B_1_TraesCS6B01G002500 TTGGTTTTGAAACTTAATGACAGATTAATATTCTTGCTTGAATATCCACA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AACTGTCTATGAATTTTGCATCGCCTTTTAGATGATCATTCAATCCTTTT chr6B_1_TraesCS6B01G002500 AACTGTCTATGAATTTTGCATCGCCTTTTAGATGATCATTCAATCCTTTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTAGAGATTACATGCTATAGCTGTTTATGTACTAGCTGCTCTGCATACGT chr6B_1_TraesCS6B01G002500 TTAGAGATTACATGCTATAGCTGTTTATGTACTAGCTGCTCTGCATACGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TTTTTTGTGCCAATAAGTCCTTACTCTGTTCTGCAGGTTTTTTTGGGCCA chr6B_1_TraesCS6B01G002500 TTTTTTGTGCCAATAAGTCCTTACTCTGTTCTGCAGGTTTTTTTGGGCCA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GCAGATTCAAGAAACACCAGGCGCTTCCAATGCAATCACGACACCCTCGA chr6B_1_TraesCS6B01G002500 GCAGATTCAAGAAACACCAGGCGCTTCCAATGCAATCACGACACCCTCGA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTGGAACCACAGGTAATTTATTCTCTGTTTTTTTTCATATTATTAGGTCT chr6B_1_TraesCS6B01G002500 GTGGAACCACAGGTAATTTATTCTCTGTTTTTTTTCATATTATTAGGTCT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TCACAAACTTCAGATCAAAGCCCCACAATACAGTCATCATTTTTCCAAGA chr6B_1_TraesCS6B01G002500 TCACAAACTTCAGATCAAAGCCCCACAATACAGTCATCATTTTTCCAAGA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACCAACCCTGCATGACACATATAGTTTATGTTCAATGAGCTATTATTTGA chr6B_1_TraesCS6B01G002500 ACCAACCCTGCATGACACATATAGTTTATGTTCAATGAGCTATTATTTGA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GACATGTCCTATATTACCTTTGTTTTTCTTTGTTTTGTCTTTTTTCAGAA chr6B_1_TraesCS6B01G002500 GACATGTCCTATATTACCTTTGTTTTTCTTTGTTTTGTCTTTTTTCAGAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ACGATAAATGGTCAACAAGGCGATTTAAAAGTGTATGTTCCTAGGAAATT chr6B_1_TraesCS6B01G002500 ACGATAAATGGTCAACAAGGCGATTTAAAAGTGTATGTTCCTAGGAAATT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTCTTATATTGAATTGGCACAAGCAACAGCTAATTTCAATGAGGAGAGAA chr6B_1_TraesCS6B01G002500 CTCTTATATTGAATTGGCACAAGCAACAGCTAATTTCAATGAGGAGAGAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AGCTTGGACAGGGTGCTTTTGGTGTTGTCTATGACGGCAGACTTGAAGGC chr6B_1_TraesCS6B01G002500 AGCTTGGACAGGGTGCTTTTGGTGTTGTCTATGACGGCAGACTTGAAGGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -GCTTGGACAGGGTGCTTTTG----------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ATAGATGGGTCTGTGGCGATAAAAGAGATCCTAGAAACGTTCTCAGAACA chr6B_1_TraesCS6B01G002500 ATAGATGGGTCTGTGGCGATAAAAGAGATCCTAGAAACGTTCTCAGAACA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AACGAAAAAGGCTTTTGATGTTGAAGTTCAAATTATGAGCCAGCTGCATC chr6B_1_TraesCS6B01G002500 AACGAAAAAGGCTTTTGATGTTGAAGTTCAAATTATGAGCCAGCTGCATC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ATCGGAACATTTTAAGTCTAAAGGGTTGGTGTAAGGAAGACCAACACCTA chr6B_1_TraesCS6B01G002500 ATCGGAACATTTTAAGTCTAAAGGGTTGGTGTAAGGAAGACCAACACCTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTGCTTATCTACGAAAAAGTGGAGAACGGTAACCTGGAGGACCATCTTTA chr6B_1_TraesCS6B01G002500 CTGCTTATCTACGAAAAAGTGGAGAACGGTAACCTGGAGGACCATCTTTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CCCTAAGAATGGCGCCATGGATAGTGGAGTTTATACTGAAAGAGAGAATG chr6B_1_TraesCS6B01G002500 CCCTAAGAATGGCGCCATGGATAGTGGAGTTTATACTGAAAGAGAGAATG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GTACATGTCTGTCTTCACACCTAAGTTGGCTGACAAGGTATGCAAAACAT chr6B_1_TraesCS6B01G002500 GTACATGTCTGTCTTCACACCTAAGTTGGCTGACAAGGTATGCAAAACAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTGTATATTTATGAAACCAAGCATCTATGTTAATTCCTCATCTTTAAGAT chr6B_1_TraesCS6B01G002500 CTGTATATTTATGAAACCAAGCATCTATGTTAATTCCTCATCTTTAAGAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AGCTATATACTAGAATTTAATATCATTAACGTATACATGCATGTTTCCTA chr6B_1_TraesCS6B01G002500 AGCTATATACTAGAATTTAATATCATTAACGTATACATGCATGTTTCCTA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TGTGTTTCAGGTGCAACATAATAATTGGTATAGCCTCTGGTCTAGCATAC chr6B_1_TraesCS6B01G002500 TGTGTTTCAGGTGCAACATAATAATTGGTATAGCCTCTGGTCTAGCATAC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CTCCATAAGGAATGCCAGGCTACTGTCGTGCATAGGGATCTCAAGCCAGC chr6B_1_TraesCS6B01G002500 CTCCATAAGGAATGCCAGGCTACTGTCGTGCATAGGGATCTCAAGCCAGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TAATGTAATGCTGGACAAGAACTGGAATGCTAAACTGGCAGACTTTGGGC chr6B_1_TraesCS6B01G002500 TAATGTAATGCTGGACAAGAACTGGAATGCTAAACTGGCAGACTTTGGGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TGGTGACACAACTCAGGCGTACCCAAACCTCGCGCCCTACGGACAATGTC chr6B_1_TraesCS6B01G002500 TGGTGACACAACTCAGGCGTACCCAAACCTCGCGCCCTACGGACAATGTC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ATCGGGACACTATCATATATGGACCCAGCATACATGAACACCGGCAAAGT chr6B_1_TraesCS6B01G002500 ATCGGGACACTATCATATATGGACCCAGCATACATGAACACCGGCAAAGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ATCCGAGCACTGTGATGTCTACAGCTTCGGCGTGGTATTGCTTGAGATTG chr6B_1_TraesCS6B01G002500 ATCCGAGCACTGTGATGTCTACAGCTTCGGCGTGGTATTGCTTGAGATTG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TCTGTGGTAAAAGACCATCCATCATGCAAGGCAGTGATAACACTAGAAAG chr6B_1_TraesCS6B01G002500 TCTGTGGTAAAAGACCATCCATCATGCAAGGCAGTGATAACACTAGAAAG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 AACAGCCTCATCGAGATGGTCCGTGAATGTCAAGGGAGGAATAGAATTAT chr6B_1_TraesCS6B01G002500 AACAGCCTCATCGAGATGGTCCGTGAATGTCAAGGGAGGAATAGAATTAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -----CCTCATCGAGATGGTCCGTG------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CGATGCAGCTGACAAAGGGCTCAGGGGGCAGTACGACAATAAGATCAAAG chr6B_1_TraesCS6B01G002500 CGATGCAGCTGACAAAGGGCTCAGGGGGCAGTACGACAATAAGATCAAAG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 ATGTGTTACGGCTCGGTCTCGAGTGCGTCCACTCAGATCGTCGTGATCGT chr6B_1_TraesCS6B01G002500 ATGTGTTACGGCTCGGTCTCGAGTGCGTCCACTCAGATCGTCGTGATCGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 CCACATGCCGTAAGAGTGAGGGATCGCTTAAATGATCTGGTGCCGAATGG chr6B_1_TraesCS6B01G002500 CCACATGCCGTAAGAGTGAGGGATCGCTTAAATGATCTGGTGCCGAATGG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 ------GCCGTAAGAGTGAGGGATCG------------------------ forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GAAGGGATTAGCTGCCTCGACCTCTCAGAGTGAAGGGGAGTTTGGTACGT chr6B_1_TraesCS6B01G002500 GAAGGGATTAGCTGCCTCGACCTCTCAGAGTGAAGGGGAGTTTGGTACGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 GCAGGATCACGTTCCCTACGCATTCACTGGCCGACGAAGAAGCTGGCGTT chr6B_1_TraesCS6B01G002500 GCAGGATCACGTTCCCTACGCATTCACTGGCCGACGAAGAAGCTGGCGTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 TCACCCCTTCTTTCTAGGTGA----------------------------- chr6B_1_TraesCS6B01G002500 TCACCCCTTCTTTCTAGGTGAGAAGAAACTGAAGAAGATGTTAACCTCAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GGCTGTGCCCTGCAGGAATGCAGATATGACGGCCACAGAAGCTACTTCTC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 TCCATCTACCCGGCCACCGCCTACAAATGTATCTCGATCTCTCTTTGTTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 AGTCGTCTGTTTAGCAGTATCTCTCCATTCAACAACATTTGGCTTTACAA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 TATAGAAAATTGTAAGCATATATGTTACTCTGTGGAAATGATTTGGAATT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GTAGTTTCTAAACTTCTCACTTTAAAATTTAAGCCATGAAGGGAAATGTT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CTTCAATAGCGATGCTGGTCCATATATATATATATACTATTTTTCGGCGG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CAGCGTGCCGATCCTGAATTTTATTAAGACATGGCACGGTGGTTTTCCTG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CTATTTCTTTCTAAGACCTGGACAGGGTGAGCAATGTAGGAGTTGTACTC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CGGTAGTTTTGTAAAGTGGCTTGGCATAGTACCAACTTATATAGTACACG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GCAGATTTTTTATTTCCGATAAAGGGTGGTTTCATTATCTCGAAATGTAG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CATCAAACTTATACAAACATTATGAGTAACCCCTGGACTCTGCACATAGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 GAAACACTTGAAATCTGACAGTAGGAAATGTAACTAAACGGACAAATCGG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CAACAGTAGAGTCCTATATACAGACACTATACATATATCCAAAGTGGTGG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------TCCAAAGTGGTGG input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 TGGATCGTGTTAACATGTAATGTTGTATACTTTCTGTACAAGCATGTTGT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 TGGATCG------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CACGTTGGTAGCTCTATTTTGGATCTCACCGAAGCTCATGGCCAGCGTGC chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 CTCAATTCCGAATAAGTAGATTTACCAGAGCCGGGATGTAGCGGCATTGG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 ATCCACCATTCGTCACTTTCTTCAAGATCTGTGCGCCCCCACTCCGTATA chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 ATGTAGTAATTCCAGCCGGAAATTTATACAATGGGAATACCCCTGACCAG chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 -------------------------------------------------- chr6B_1_TraesCS6B01G002500 ACTGACACGTTGTGCAAAATACAATATAATGGAGCCTACCACTGCCGGAT chr4A_267 -------------------------------------------------- chrUn_292 -------------------------------------------------- chr4A_295 -------------------------------------------------- chr4A_356 -------------------------------------------------- chr3B_487 -------------------------------------------------- chr3B_1365 -------------------------------------------------- chr2D_1366 -------------------------------------------------- chr2B_1366 -------------------------------------------------- chr3A_1918 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_169 -------------------------------------------------- reverse_1283 -------------------------------------------------- forward_176 -------------------------------------------------- reverse_2211 -------------------------------------------------- forward_1302 -------------------------------------------------- reverse_2853 -------------------------------------------------- forward_2693 -------------------------------------------------- reverse_3785 -------------------------------------------------- forward_2872 -------------------------------------------------- reverse_5067 -------------------------------------------------- forward_3128 -------------------------------------------------- reverse_5068 -------------------------------------------------- forward_3143 -------------------------------------------------- reverse_5070 -------------------------------------------------- forward_3181 -------------------------------------------------- reverse_5075 -------------------------------------------------- forward_3182 -------------------------------------------------- reverse_5157 -------------------------------------------------- forward_5086 -------------------------------------------------- reverse_6902 -------------------------------------------------- forward_5921 -------------------------------------------------- reverse_7857 -------------------------------------------------- forward_7725 -------------------------------------------------- reverse_8688 -------------------------------------------------- input_sequence_1798 --------------------- chr6B_1_TraesCS6B01G002500 ATTTAATCTCACTATCGTTCT chr4A_267 --------------------- chrUn_292 --------------------- chr4A_295 --------------------- chr4A_356 --------------------- chr3B_487 --------------------- chr3B_1365 --------------------- chr2D_1366 --------------------- chr2B_1366 --------------------- chr3A_1918 --------------------- SNPs SSSSSSSSSSSSSSSSSSSSS forward_169 --------------------- reverse_1283 --------------------- forward_176 --------------------- reverse_2211 --------------------- forward_1302 --------------------- reverse_2853 --------------------- forward_2693 --------------------- reverse_3785 --------------------- forward_2872 --------------------- reverse_5067 --------------------- forward_3128 --------------------- reverse_5068 --------------------- forward_3143 --------------------- reverse_5070 --------------------- forward_3181 --------------------- reverse_5075 --------------------- forward_3182 --------------------- reverse_5157 --------------------- forward_5086 --------------------- reverse_6902 --------------------- forward_5921 --------------------- reverse_7857 --------------------- forward_7725 --------------------- reverse_8688 ---------------------