>input_sequence_47059
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-------------------------------------------------ATGGTTGGACAGGTGATCGGGAACAAGTGGG
ACCACTACCTCGATCTTCTCCAGGCCGACTACACTGAGGGGTAAACATTTATGCATCCTGGTTCCTGTTCTGCGGTTTGA
TTG--TGCATATTGTACTGGCTCTGCCTTTGATCCTGTTTTGGTGGATGA-GGCCTTGAGGGAGCCTGCATTTGCAATGT
CGGCTTCTTTTTATTTATAGCTACAAGGGAACATGTTTCACTTCTATGTGAGGAAGTTATGCACACAAGTGTGATAGACT
GGTATGCTGTATATCTTGTGACGTACATGGTGCACCTCTGAACACCGTAGCAGACCTGATCCATAATGAATAAACACTGA
AAACT---GGCTATGTCATGCATCTTTTGATGCATTTGGGGGCCCTTACTAGTGCTGTGCTTCCCTGTTTTAGATATTTC
GTAAGCCTTGTACTTGCCATTTCACTGAACTGTCACTTTGACTGGGATGTGTGGAGCACTTAGACTTATGCCAGTGTTAA
ACCAAATGGCCAAGTCTGGATGATAGTTGCTATGTTTGCATCCTAAGACGTGTTTTTCCCCGTGTT-CAAAATTTATCAT
ATTTTCTTAGTGTCGAACGTAACTAGGCACTTAAGAG----GCAGTATACTAATCTTTGTAGTCTTTGCAAAAAAATAAA
TAAATCATCTTTTTAGCCATGTGTACTCTCCATACTCCGCTTGCTGTGTCGTAACGTTATGTTGGAATAATATTGCGTAT
ATAGTAAATGGACGCTAGAAAGATGAAAAAAACAGAAGCTCATGATGAACTGTAAATTTTATTGCATGCGATTGTA----
-------TT---ATTGTCGGACTTAGCGAGGTACATAGAGTATAGTAAAAAAATGTCATCAGATTAGCCATATGTACTCC
CC---CCTACTCTGCAT-CCGTTTGACAATGAAATGATGTTATTGTGTAATAGT--------------------------
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------------------------------------------ATGCTGTTTCTTGTTAATGAACACTATAATGACAAGAC
AAATGTTCATGGTGTAAAATTGTAAATTAT----------------ATTACATGCATATTGGAGTTACCAACATATTGGA
GTCAACCGTTGAGTGTGGCTGTCTGGCTGAGATGCTTGGTTTCTGAAATGTTGGAATCTTTTCTATTTGGTGTTCCACCT
GGACATTTGTGTCTATGTTTTTCTTCCCCATGCTTAAGGCCTAGATAATCACTATTGACACTTAATCTATGTATATCCCA
GTTGGTACTTATTTGTCAATACAGTTCCTGGAAAATAGAAGAGCATCTTTATCCTACCTA--TTTTATACTTTTCCAGAG
ATTAGAATTATTAGAAGGGA--CATTGGTTATGGTTTATTAGATAA-TTTTTATTGTTAATATTGTATATCTTGTTTAAA
ACTGACATTCAAAATTCGGATTTAATACATCCTTTTGCTGTTGTATGTTGTTAGGGATGCTCTGGATGCCTTGGGCTTGG
TTCGCTACTGCTGCCGCCGTATGCTCATGACCCATGTTGACCTCATTGAGAAGTTGCTCAACTACAACAGTAAGTTGATG
CTGTTATGTAACTTTGTAAGCTATATTCTGCT---TCCTTTGTTA-TT-CTTTTGGAACCGACACTTGTTCATTTTCAGC
CCTGGAGAAGACGGAGACAAGTTGA-------------------------------------------------------
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>chr5D_1_TraesCS5D01G125400
GAATGATTGTATGAATATTCTAAATTAATTAATATATGTATGAGGTTTAAAAAAAAAAGATTTTTTGCCTTCGAGTGTAA
CTCTCTCATTATGAAATAAAACTCTCTTTTCCTTAAAAAAAAGAAGGTTGTGTTCTGTGCAATTCACTCGGGGAAAAAAT
CTCGTTGCCCTTCCTTTTTTTTAGAACATCTCGTTGCCCTTCCTGCGAAGCCTTTCCTTTCCTCTCACTGACCCTCGCCT
TCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCGGCAAAAGAAGGTTTCGTCGATTCGCCGCTCTCTCGTGCTCCCG
TCGGCCACCCTTTAAGGACGCACGCCGCTGCTTAGGCCACATCCCCTCTTA--GGGTATCCGCACTCTGCTTCTAGGTTT
ATGTGGTGGTACACTTTAAGATTGTTCTCATCG-TCCTCTCAAATAATCAAGTG-TGTTTACTCGTATATGGTCGCTAGC
TGTTTGTACCCACAGGTTTAACACTAGGGTGTAGTTGTTGTGTGGCGCAACATTTTTTCTAGG-TTAGGCTTACTGAAAA
GAATTCCATTT-AGACTTCTGTGAACAACTCTGCATA-TTTTTCTTATCTACATATTCATATAATGCATCGGGAGAACCC
CTTGCCTTTT--ATCTAAAGAAAGAGATCAACTCACAAGTTCAATTTGTATGGTTGGACAGGTGATCGGGAACAAGTGGG
ACCACTACCTCGATCTTCTCCAGGCCGACTACACTGAGGGGTAAACATTTATGCATCCTGGTTCCTGTTCTGCGGTTTGA
TTG--TGCATATTGTACTGGCTCTGCCTTTGATCCTGTTTTGGTGGATGA-GGCCTTGAGGGAGCCTGCATTTGCAATGT
CGGCTTCTTTTTATTTATAGCTACAAGGGAACATGTTTCACTTCTATGTGAGGAAGTTATGCACACAAGTGTGATAGACT
GGTATGCTGTATATCTTGTGACGTACATGGTGCACCTCTGAACACCGTAGCAGACCTGATCCATAATGAATAAACACTGA
AAACT---GGCTATGTCATGCATCTTTTGATGCATTTGGGGGCCCTTACTAGTGCTGTGCTTCCCTGTTTTAGATATTTC
GTAAGCCTTGTACTTGCCATTTCACTGAACTGTCACTTTGACTGGGATGTGTGGAGCACTTAGACTTATGCCAGTGTTAA
ACCAAATGGCCAAGTCTGGATGATAGTTGCTATGTTTGCATCCTAAGACGTGTTTTTCCCCGTGTT-CAAAATTTATCAT
ATTTTCTTAGTGTCGAACGTAACTAGGCACTTAAGAG----GCAGTATACTAATCTTTGTAGTCTTTGCAAAAAAATAAA
TAAATCATCTTTTTAGCCATGTGTACTCTCCATACTCCGCTTGCTGTGTCGTAACGTTATGTTGGAATAATATTGCGTAT
ATAGTAAATGGACGCTAGAAAGATGAAAAAAACAGAAGCTCATGATGAACTGTAAATTTTATTGCATGCGATTGTA----
-------TT---ATTGTCGGACTTAGCGAGGTACATAGAGTATAGTAAAAAAATGTCATCAGATTAGCCATATGTACTCC
CC---CCTACTCTGCAT-CCGTTTGACAATGAAATGATGTTATTGTGTAATAGT--------------------------
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------------------------------------------ATGCTGTTTCTTGTTAATGAACACTATAATGACAAGAC
AAATGTTCATGGTGTAAAATTGTAAATTAT----------------ATTACATGCATATTGGAGTTACCAACATATTGGA
GTCAACCGTTGAGTGTGGCTGTCTGGCTGAGATGCTTGGTTTCTGAAATGTTGGAATCTTTTCTATTTGGTGTTCCACCT
GGACATTTGTGTCTATGTTTTTCTTCCCCATGCTTAAGGCCTAGATAATCACTATTGACACTTAATCTATGTATATCCCA
GTTGGTACTTATTTGTCAATACAGTTCCTGGAAAATAGAAGAGCATCTTTATCCTACCTA--TTTTATACTTTTCCAGAG
ATTAGAATTATTAGAAGGGA--CATTGGTTATGGTTTATTAGATAA-TTTTTATTGTTAATATTGTATATCTTGTTTAAA
ACTGACATTCAAAATTCGGATTTAATACATCCTTTTGCTGTTGTATGTTGTTAGGGATGCTCTGGATGCCTTGGGCTTGG
TTCGCTACTGCTGCCGCCGTATGCTCATGACCCATGTTGACCTCATTGAGAAGTTGCTCAACTACAACAGTAAGTTGATG
CTGTTATGTAACTTTGTAAGCTATATTCTGCT---TCCTTTGTTA-TT-CTTTTGGAACCGACACTTGTTCATTTTCAGC
CCTGGAGAAGACGGAGACAAGTTGAAGTTAATTGAACCCATTCTGCCTCGAAACCTTTGTTCCTTTGTACTTTCCAAG--
-------ATGCTGTTTCTTACGTCAGTGCTTAGGAGGTGA----------------------------------------
-----AAGGACTGTTAGTGTGACCATGCGTTTCTACTATGTAATCTTCA-------------------------------
--GGGCTATATTAACCAACAAGTCTATGCATTCTCCAGTTTCAAACTTATTATGCTCCAAGCGTTGAACATGTTATTCGT
GTGCTTTCTGTTGGATCTTGTTGGTTGTGGGCACCCATGGGTATCTTACCATTGAATCGTCACT--AGTCA---------
------TATGCATTGAACTTCCACATGTACCTTCATGCTTGA---TATTTGTTTGTTTTCTATTCCTCTGATGACATCGA
C-GTATCTAAAATCTAGATATATAACTATTGCGGTTTTGAGCACATGCAAACAATGCTCATCGACAATTTGTTCGTGACT
CCTGTTAACTTGAATTGTCATCCATTCATCCACTTGTTGACCTAGGTGGTAATCATATTGCAAGGGTGTCATTACCATCG
GTGTTGACCTATAGTGCAATCATCGTACTATTCATTGATGCATGCATAATTGCACATGCTTCTCTTAGCAAAGCCTCGTT
GTATGGTAGAGATGCTCTGTTTTCGACGGTCGTGCTTGTTTATGGTGATGCTGCATCCATAACATGTTCTTGTAGGCC--
-TAATCATACAATCCACCTCTCTCATTTCCATTGACCTGCGAATTCCGTGGAACATCCCCAGGGATTAAGATTAAGATCA
CGCTG----CTTAGCACGATCATGAAGTTTTATTTAGCGTATATGTATTTCTGTATTATGCGTTTAAACTGGTTAGTTCA
ATCAGAGACATACACATCAATTTGAAAAATCCCTAAAAAATAAGTTTGAAAAAGCATCTACAGTTAGTTCTCACCATAAC
GGATGCATAATTTATTCTAGAACCAGAATTCTCCATCGATGTGTATTGTTTGGATGGGCAGTATTTTTCTTCGGATCTTA
TGTGTTCATTTCAAATTTGA
>chr5A_607
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----------------------------------------------GGTTTCTTCGATTCGCCGCTCTCTCGTGCTCCCG
TCGGCCACCCTTTAAGGACGCACGCCGCGGCTTAGGGCACATCGCCTCTTA--GGGTATCCGCACTCTTCTTCTAGGTTT
ATGTGGTGGTATGCTTCAAGA-TTTTCTCATCGATACTCTCGAATAATCAAGTGATGTTTTATCGTATATAGTCGCTAGC
TGTTTGTACCCAAGA-TTCAACACTAGGGTGTAGTTGTTGTGCGGCACAACAATTT--------------TTACTGAGAA
GTATTCCATTT-AAACTTCTGTGAACAGCTCTGCATGTTTTTTCTTATCTACATATTCATATAATGCATCGGGAGAACTC
CTTGCCTTTT--ATCTAAAGAAAGAGATCAGCTCACAAGTTCAATTTGTATGCTTGGACAGGTGATCGGGAACAAGTGGG
ACCACTACCTCGATCTTCTCCAGGCCGACTACACTGAGGGGTAAGCATTTATGCATCCTGGTTCCTGTGCTGCGGTTTGA
TTG--TGCATATTGTACTGGCTCTGCCTTTGATCCTGTTTTGGTGGATGA-GGCCTTCAGGGAGCCTGCATTTGCAATGT
CGGCTTCTTTTCGTTTTTAGCTACAATGGAACATGTTTCACTTCTATGTGAGGAAGTTATGCACATAAGTGTGATACACT
AGTATGCTGTATATCTTGTGACGTACATGGTGCACCACCGAACACCGTAGCAGACCTGATCCATAATGAATGAGCACTGA
AAACT---GGCTGTGTCATGCATCTTTTGATGCATTTGGGGTCCCTTACTAGTGTGGTGCTTCCCTGTTTTAGATGTTTC
GTAAGCCTTGTACTTGCCATTTCACTGAACTGTCACTTTGACTGGGATGTGTGGAGCAGTTAGAATTATGCCAGTGTTAA
ACCAAATGGCTAAGTCTGGATGATAGTTGCTATGTTTACATCCTATGACGTGTTTTTCCCTGTGTT-CAAAATTT-----
----------------ACGTAACTAGGTACTTAAGAGTATGGCGGTGTACTAATCTTTGTAGTCTTTGCCAAAAAAAATA
AAATTCACCTTTTTAGCCATGTGCACACT-CATACTCTGCATGCTGTGTCGTAATGTTATGTTGGAATAATATTGTGTAT
CTAGTAAATGGACGCTAGAAAGACGAAAAAA-TAGAAGCTCATGATGAACTGTAAATTTTATTGCATGAGATTGTA----
TTATATTTT---ATTGTCTGACTTAGCGAGGTACATGGAGTATAGT-AAAAAATGTCATCAGATTAGCCATATGTACTTG
T--CCCTTACTCTGCATACCGGTTGACAATGAAATGATGTTATTGTGTAATGGT--------------------------
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------------------------------------------ATGCTGTTTCTTGGTAATGAACACTATAATGACAAGAC
AAATGTTCATGGTGTAAAATTGTAAATTAT----------------ATTACATACATATTGGAGTTACCAACTTATTGGA
GTCTACCGTTGAGTGTGGCTGTCTGGCTGGGGTGCTTGGTTTCTGAAATGTTGGAATCTTTGCTGCTTTGTGTTCCACCT
GGACATTTGTGTCTATGTTTTTCTTCCCCATGCTTAAGGCCCAGATAATCACTATTGACACTTAATCTATGTATATCCCA
ATTGGTACTTATTTGTCAATACAGTTCCTGGAAAATAGAGGAGCATCTTTATCCTACCTA--TTTTATACTTTTCCAGAG
ATTAGAATTATTAGAAGGGA--CATTGGTTATGGTTTATTAGATAA-TTTTTATTGTTAATATTGTATATCATGTTTAAA
ACTGATATTCCA----------------ATCTTTCTGCTGTTGTATGTTGTTAGGGATGCTCTGGATGCCTTGGGCTTGG
TTCGCTACTGCTGCCGCCGTATGCTCATGACCCATGTTGACCTCATTGAGAAGTTGCTCAACTACAACAGTAAGTTGATG
CTGTTATGTAACTTTGTAAGCTATATTCTGCT---TCCTTTGTTA-TTTCTTTTGGAACTGACACTTGTTCA-TTTCAGC
CCTGGAGAAGACGGAGACAAGTTGAAGTTAATTGAACCCATTCTGCCTCGAAGCCTTTGTTCCTTTGTACTTTTCAAG--
-------ATGCAGTTTCTTATGTCAGTGCTTAGGAGGTGCAAAATGCGAGGTCCTGAAATGAAGTTGGTTTGTTCATGAA
TCTCCAAGGACTGTTAGTGTGACCATGCGTTTCTACTAGTAATAGAG---------------------------------
--------TATTAACCAACAAGTCTATGCATTCTCCAGTTTCAAACTTATTAAGCTCCAAGCGTTGAACATGTTATTCCT
GTGCTTTCTGTTGGATCTTGTTGGTTGTGGGCACCCATGGGTATCTTAACATTGAATCGTCACT--AGTGA---------
------TATGCATTGAACTTCCACATGTACCTTCATGCTTGA---TATTTGTTTGTTTTCTATTCCTCTGATGATATCGA
T-GTATCTAAAATCAAGATAGATAACTATTGCGGTTTTGAGCACATGCAAACAATGCTCATCGATGATTTGTTTGTGACT
GCTGTTAAATTGAATTATCATCCATTCATCCACTTGTTGACCTAGGTGGTAATCATATTGCAAGGGTGTCATTCCCATCG
GTGTTGACCTATAGTGCAATCATCGTACTATTCATTGATGCATGCATAATTGCACATGCTTCTCTTAGCGAAGCCTCGTT
GTATGGTAGAGATGCTCTGTTTTCGATGGTCGTGCTTGTTTATGGTGATGCTGCATCCATAACATGTTCTCGTAGGCC--
-TAATCATACAATCCACCTCTATCATTTCCGTTGACCTGCGAATTCCGTGGAACATCCCCAGGGATTAAGATTAAGTTCA
CGCTG----CTTAGCACAATCATGAAGTTTTATTTAGTGTACATGTATTTCTGTAATAGGCGTTTAAACCGGGTAGTTCA
ATCAGAGACATACACATCAATTTGAAAAATCCCTGAAAAATAAGTTTGAAAAAGCATCTACAGTTAGTTCTCACCATAAC
GGATGCATAATTTATTCTAGAACCAGAATTCTCCATCGATGGGTATTGTTTGGATGGGCAGTATTTTTCTTGGGATCTTA
TGTGTTCATTTCAAATTT--
>chr3B_633
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------------------------------------------------------------------------TGCTCCCG
TCGGCCACCCTTTAAGGACGCACGCTGCGTCTTAGGGTACATTGCCTCTTAGGGGGTATCCGCACTCTTCTGCTAGGTTT
ATGTGGTGGTACAC--TAAGATTTTTCTCATCGATCCTCTCAAATAACCAAGTGATGTTTTATCGTATATGGTCCCTACC
TGTTTGTACCCAAGA-TTTAACTCTAGGGTGTAGTTGTTGTGTGACACATCAATTTTTCTAGGGTTAAGCTTACTGAAAA
GTACTCCATTT-AAACTTCTGTGAATAACTCTGCATGTTTTTTCTTGTCTACATATTCATATAATGCATTGGGAGAACTC
CTGGCCT-TT--ACCTGAAGAAAGAGATCAACTCACAAGATTAGTTTTTATGCTTGGACAGGTGATCGGGAACAAGTGGG
ACCACTACCTCGATCTTCTCCAGGCTGATTACACTGAGGGGTAAACATTTATGCATCCTGGTTCCTGTGCTCCGGTTTGA
TTGAGTGCATATTGTACTGGCTCTGCCTTTGATCCTGATTTGGTGGATGA-GGCCTTGAGGGAGCCTGCATTTGCAATGT
CGGCTTCTTTTCATGTTTAGCTAGAAGGGAACATGTTTCACTTATATGTGAGGAAGTTATGCACACAAGTGTGATAGACT
AGTATGCTGTATATCTTGTGACGTACATGGTGCACCACTGAACACCATAGCATACGTGATCCATAATAAATGAACACTGA
AAACTAGTGGGCATGTCATGCATCTTTTGATGCATTTGGGGGCCCTTACTAGTGTGGTGCTTCCCTGTTTTAGATATTTC
ATAAGCCCTCTACATGCCCTTTCACTGAACTGGCACTTTGACTGGGATGTGTGGAGGAATTAGAATTATGCCAGTGTTAA
ACCAAATGGCTAGGTCTGGATGATAGTTGCTATGTTTGCATCCTATTACGTGTTTTTCCCTTTGTT-AAAATTTTATCAT
ATTTTCTTTGTGTCGAACGTAACTAGGTACTTTAGAGTATGGTAGTATACTAATCTTTGTAGTCTTTGCAAAACAATAT-
---TTCACCTTTTTAGCCATGTGTACTCTCCATACTCTGCGTGCTGTGTCGTAATGTTATGTTGGAATAATATTGTGTAT
C--TTAAATGGACACTAGAAAGACAAAA-AAACAGAAGCTCATGATGAACTGTAATTTTTATTGCATGCATTATATTTTC
TTAT----------TGTCGGACGCAGCGAGGTACATAGAGTATAGT-AAAAAATGTCATCAGATTAGCCATATGTACTCC
CCACCCCTACTCTGCATACC---------------GATGTTATTGTGTAATAGT--------------------------
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------------------------------------------ATGGTGTTTCTTGTTAATGAACACTATAATGACAAGAC
AAATGTTCACGGTGTAAAATTGTAAATTAT----------------ATTACATACATATC-----------------GGA
GTCTACCGTTGAGTG--------TGGCTGAGATTCTTGGTTTCTGAAATGTTGGAATCTTTGCTCAATGGTGTTCCACCT
CGACATATATGTCTATGTTTTTGTTCCCCATGCTTAAGA-CTAGAAAATCAC----------------------------
-----TACTTATTTGTCAATACAGTTCCTGAAAACTAGAAGAGCATCTTTACCCTACCTA--TTTTTTACTTTTCTAGAG
ATTAGAATTATTAGAAGGGA--CATCTGTTATGGTTTATTAGATAA-TTT-TATTGTTAATATTGTATATAATGTTTACA
ACTATCATATTGAAATCTGATTTTATCTATCTTTCTGCTGTTGTATGTTGTTAGGGATGCTCTGGATGCCTTGGGCTTGG
TTCGCTACTGCTGCCGCCGTATGCTCATGACCCATGTTGACCTCATCGAGAAGTTGCTCAACTACAACAGTAAGTTGATG
CTGTTATATAACTTTGTAAGCTATATTCTGCTGCTTTCTTTGTTATTT-CTTTTGGAACTGACAGTAGTTCATTTTCAGC
CCTGGAGAAGACGGAGACAAGTTGA-GTTAATTGAACCCACTCTGCCTCGAAACCCTTGTTCCTTTGTACTTTTCAAGAT
GG-TGGTATGCTGTTTCTTATGTCAGTGCTTAGGAGGTGCAAAGTGTGAGGTCCTGAAATGAAGTTGGTTTGTTCATGAA
TCTCCAAGGACTGTTAGTGTGACCATCCGTTTCTACCATGTAATCATCA-------------------------------
--GGGCTATATTAAGCAACAAGTCTATGCATTATCCAGTTTCAAACTTATTAAGCTCCAAGCGTTGAACATGTTATTCCT
GTGCTTTCTGTTGGATCTTGTTGGTTATGGGCACCCATGGGTATCTTACCATTGAATCGTTACTTGAGTGA---------
------TATGCATTGAACTTCCACATTTACCTGCATGCTTGA---TATTTGTTTGTTTTCTATTCATCTGATGATATCGA
TTGTATTTAAAATCAAGATAGATAACAATTGCGGTTTC-------------------TCGTCAAACATTTGTTTGTTA--
-CTGTTAACTTGAATTGTCATCCATTCATCTACTGCTTGACCTAGGTGGTAATCATATTGCAATGGTGTCATTCCCATTG
GTG-----------------------------------------------------------------------------
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>chr3D_661
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--------------------CACGCCGCGGCTTAGGGCACATTGCCTCTTAGGGGGTAT--GCACTCTTCTTCTAGGTTT
ATGTGGTGGTACAC--TAAGATTTTTCTCATCGATCCTCTCAAATAACCAGGCGATG-----------------------
--TTTGTACCCAAGA-TTTAATGCTAGGGTGTAGTTGTTGTGTGACACATCAATTTTTCTAGGGTTAAGCTTACTGAAAA
GTATTCCATTT-AAACTTCTGTGAATAGCTCTGCATGTTTTTTCCTATCTACATGTTCATATAATGAATTGGGAGAATTC
TTGGCCT-TT--GCCTGAAGAAAGAGATCAACTCACAAGATCAGTTTTTATGCTTGGACAGGTGATCGGGAACAAGTGGG
ACCACTACCTCGATCTTCTCCAGGCCGATTACACTGAGGGGTAAACATTTATGCATCCTGGTTCCTGGGCTCCGGTTTGA
TT--GTGCATATTGTACTGGCTCTGCCTTTGATCCTGATTTGGTGGATGA-GGCCTTGAGGGAGCCTGCATTTGCAATGT
CGGCTTCTTTTCATTTTTAGCTAGA--------------------------------------------------AGACT
AGTATGCTGTATATCTTGTGACGTACATGGTGCACCACTGAACACCATAGCGTACCTGATCCATAATGCATGAAAACTGA
AAACTAGTGGCTGTGTCATGCACCTTTTGATGCATTTGGGGGCCCTTACTAGTGTGGTGCTTCCCTGTTTTAGATATTTC
ATAAGCCTTCTACTTGCCCTTTCACTGAACTGTCACTTTGACTGGGATGTATGGAGCAATTAGAATTATTCCAGTGTTAA
ACCAAATGGCTAAGAATGGATGATAGTTGCTATGTTTGCATCCTATTACGTGTTTTTCCCTTTGTT-AAAGTTTTATCAT
ATTTTCTTAGTGTCGAACGTAACTAGGTACTTAAGAGTATGGTAGTATACTAATCTTTGTAGTCTTTGCAAAACAATAT-
---TTCACCTTTTTAGCCATGTGTACTCTCCATACTCTGCATGCTGTGTCGTAATGTTATGTTG-AATAATATT--GTGT
ATCTTAAATGGACACTAGAAAGACAAAAAAA-CAGAAGCTGATGATG-ACTGTAATTTTTATTGCATACGATTGTA----
TTATATTTTCTTATTATCGGACGCAGCGAGGTACATAGAGTATAGT-AAAGAATGTCATCAGATTAGCCATATGTACTCC
CCACCCCTACTCTGCATACC---------------GATGTTATTGTGTAACAGT--------------------------
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------------------------------------------ATGGTGTTTCTTGTTAATGAACACTATAATGACAAGAC
AAATGTTCAT-GTGTAAAATTGTAAATTAT----------------ATTACATACATATTATAGTTACGAACACATTGGA
GTCTACCGTTGAGTG--------TGGCTGAGGTGCTTGGTTTCTGAAATGTTGGAATCTTTGCTCGATGGTGTTCCACCT
CGACATTTGCGTCTATGTTTTTGTTCCCCATGCTTAAGA-CTAGGAAATCAC----------------------------
-----TACTTATTTGTCAATACAGTTCCTAAAAACTAGAAGAGCATCCTTACCCTACCTATTTTTTTTACTTTTCTAGAG
ATTAGAATTATTAGAAGGGA--CATCGGTTATGGTTTATTAGATAA-CTT-TATTGCTAATATTGTATATAATGTTTACA
ACTATTATATTGAAATCTGATTTTATCCATCTTTCTGCTGTTGTATGTTGTTAGGGATGCTCTGGATGCCTTGGGTTTGG
TACGCTACTGCTGCCGCCGTATGCTCATGACCCATGTTGACCTCATCGAGAAGTTGCTCAACTACAACAGTAAGTTGATG
CTGTTATGTGACTATGTAAGCTATATTCTGCTGCTTCCTTTGTTATTT-CTTTTGGAACTGACAGTAGTTCATTTTCAGC
CCTGGAGAAGACGGAGACAAGTTGA-GTTAATTGAACCCATTCTGCCTCGAAACCCTTGTTCCTTTGTAGTTTTCAAGAT
GGATGGTATGCTGTTTCTTATGTCAGTGCTTAGGAGGTGCCAAGTGTGAGGTCCTGAAATGAAGTTGGTTTGTTCATGAA
TCTCCAAGGACTGTTAGTGTGACCATCTGTTTCTACTATCTAATATTCAGGGCTTCTTCTCAAAAAAAAAATCTAATATT
CAGGGCTATATTAACCAAC-AGTCTATGCATTATCCAGTTTCAAACTTATTAAGCTCCAAGCGTTGAACATGTTATTCCT
GTGCTTTCTGTTGGATCTTGTTGGTTGTGGGCACCCATGGGTATCTTACCATTGAATCGTTACTTGAGTTA---------
------TATGCATTGAACTTCCACATTTACCTGCCTGCTTGACACTATTTGTTTGTTTTCTATTCATGTGATGATATCGA
TTGTATTTAAAATCAAGATAGATAACAATTGCGGTTTTGAGCACATGCAAACAATGCTCGTCGAACATTTGTTTGTTACT
GCTGTTAACTTGAATTGTCATCCATTCATCTATTGGTTGACCTAGGTGGTAATCATATTGCAAGGGTGCCATTCCCATTG
TTCTTGACATATAGTGCAACCACCGTACTATTCATTGATGCATGCATAAG-------------------------TCGTT
GTACTGTAGAGATGCTCTGTTTGCGACGGTCGTGCTTGTTTATGGTGATGCTGCAGACATAACATGTTCTTGTAGGCC--
-TAATCATACAATCCACCTCTCTCCTTTCCGTTGACCTGTGAATTTCGTGGAACATCCCCAGGGATTAAGATTAAGATCA
TGCTGCTTACTTAGCACGATCATGAAGTTTTATT----------------------------------------------
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>chr3A_850
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-----------------------------------------------------TTTTTCTAGGGTTAAGCTTACTGAAAA
GTATTCCATTTTAAACTTCTGTGAATAGCTCTGCATGTTTTTTCTTATCTACATATTCGTATAATGAATCGGGAGAACTC
GTGGCCT-TT--GCCTGAAGAAAGAGATCAACTCACAAGATCAGTTTTTATGCTTGGACAGGTGATCGGGAACAAGTGGG
ACCACTACCTCGATCTTCTCCAGGCCGATTACACTGAGGGGTAAACATTTATGCATCCTGGTTCCTGGGCTTTGGTTTGA
TT--ATGCATATTGTACTGGCTCTGCCTTTGATCCTGATTTGGTGGATGATGGCCTTGAGGGAGCCTGCATTTGCAATGT
CGGCTTCTTTTCATTTTTAGCTAGA--------------------------------------------------AGACT
AGTATGCTGTATATCTTGTGACGTACATGGTGCACCACTGAACACCATAGCGTACCTGATCCATAATGCATGAACACTGA
AAACTAGTGGCTGTGTCATGCATCTTTTGATGCATTTGGGGGCCCTTACTAGTGTGGTGCTTCCCTGTTTTAGATATTTC
ATAAGCCTTCTACTTGCCCTTTCACTGAACTGTCACTTTGACTGGGATGTATGGAGCAATTAGAATTATTCCAGTGTTAA
ACCAAATGGCTAAGAATGGATGATAGTTGCTATGTTTGCATCCTATTACGTGTTTTTCCCTTTGTT-AAAGTTTTATCAT
ATTTTCTTAGTGTCGAACGTAACTAGGTACTTAAGAGTATGGTAGTATACTAATCTTTGTAGTCTTTGTAAAACAATAT-
---TTCACCTTTTTAGCCATGTGTACTCTCCATACTCTGCATGCTGTGTCGTAATGTTATGTTGGAATAATATTGTGTAT
CA--TAAATGGACACTAGAAAGACAAAAAAA-CAGAAGCTCGGGATGAACTGTAATTTTTATTGCATGCGATTGTA----
TTATATGTTCTTATTATTGGACGCAGCGAGGTACATATAATATAGT-AAAAAATGTCATCAGATTAGCCATATGTACTCC
CCACCCCTGCTTTGCATGGTTTTTTTTTTTTTGAGCAGGAATAAAATTCATTCCACTTAGAGCTGGCGCACCATCTGTGT
CAACCAGAATCGAAACAAAGTCTGGGGCCTCCACAGCCCAAACAGAAAAAGGGACAGCAGCCCTCAAACCAAATTGCGCC
AGAGAGTGCGCAACCCTATTACATTCCCTACGACAGAACATGAACTCATAGGAACCAAAAGAAACATGGCATACACTCCT
AGCTTCCCTGAAGAGAACACCCAACTCTGCTGTGTCGTAGTCCCGGCCCTTGAGCGCATTGATCATCATTAGACAATCTG
ATTCAAGGATGATACGCTGAGCACCCAGATCTGCCACGCCCTCAATAGCTTTCATGCATGCACTGATCTCCGCTTGCAGA
GGGCTCCGGACATACTGCATCTTCCCAGCCGCCGCTGCTAGGAAATTTCCCATCTCATCCCGAATTACAAAACCCCAAGC
ACCCACCTCTGACTCCGCAAGGAAGGCCGCATCCATGTTTATCTTTACCCGACCTGACTCAGGGGCAGTCCAGGACTGTT
TTTGCATGCCTTGTGTGTTGCCCCTAGCCTGCAAGTTCTCAAAGTCTTGAACGTGTCTGCTAATGACCCCACTCACTTCC
TGAGCTGTTTTCTGTTTGTCACCCGTATTCGTTTTGTTTCTCGTAGTCCACCAGTCCCATAGGAGTACAGCCACCCGGTG
CTTCTTCTCTTCTGGCAGTGCACAAACAGCATTTATGACTTGGAAAGAGTCCTTGCAGTCGCACAACAATAGGCGGGTCT
CTTCCAGATTCTGCTCTCGCCAAACCGCCTTCACACACTTGCATGGTGTTTCTTGTTAATGAACACTATAATGACAAGAC
AAATGTTCATGGTGTAAAATTGTAATTATTTTACATACATATTGGAATTACCAACATATT-----------------GGA
GCCTACCGTTGAGTG--------TGGCTGAGGTGCTTGGTTTCTGAAATGTTGGAATCTTTGCTCAATGGTGTTCCACCT
CGACATTTGTGTCCATGTTTTTGTTCCCCATGCTCAAGA-CTAGAAAATCAC----------------------------
-----TACTTATTTATCAATACAGTTCCTGAAAACTAGAAGAGCATCTTTACCCTACCTA--TTTTTTACTTTTCTAGAG
ATTAGAATTATTAGAAGGGAGACATCGGTTATGGTTTATTAGATAAT-TT-TATTGTTAATATTGTATATAATGCTTACA
ACTATTATATTGAAATCTGATTTTATCCATCTTTGTGCTGTTGTATGTTTTTAGGGATGCTCTGGATGCCTTGGGCTTGG
TTCGCTACTGCTGCCGCCGTATGCTCATGACCCATGTTGATCTCATCGAGAAGTTGCTCAACTACAACAGCAAGTTGATG
CTGTTATGTAACTTCGTAAGCTATATTCTGCTGCTTCCTTTGTTATTT-CTTTTGGAACTGACAGTAGTTCATTTTCAGC
CCTGGAGAAGACGGAGACAA----------ATTGAACCCATTCTGCCTCGAAACCCTTGTTCCTTTGT-CTTTTCAAGAT
GGATGATATGCTGTTTCTTATGTCAGTGCTTAGGAGGTGCAAAGTGTGAGGTCCTGAAATGAAGTTGGTTTGTTCATGAA
TCTCCAAGGACTGTTAGTGTGACCATCCGTTTCTAGTATGTAATCTTCA-------------------------------
--GGGCTATATTAACCAACAAGTCTATGCATTATCCAGTTTAAAACTTATTAAGCTCCAAGCCTTGAACATGTTATTCGT
GTGCTTTCTGTTGGATCTTGTTGGTTGCGGGCACCCATAGGTATCTTACCACTGGATCTTGTTGGTTGTGGGCACCCATG
GGCACCTATGCATTGAACTTCCACATTTACCTGCATGCTTGA---TATTTGTTTGTTTTCTATTCATCTGATGATATCTA
TTGTATTTAAAATCAAGATAGATAACAATTGCGGTTTCGAGCACATGCAGACAATGCTCGTCGAACATTTGTTCGTTACT
GCTGTTAACTTGAATTGTCATCCATTTATCTACTGGTTGACCTAGGTGGTAATCATATTGCAAGGGTGACATTCCCATTG
GTGTTGACGTATAGTGCAATCATCGTACTATTCACTGATGCATGCATAATTGCACATGCTT----TAGCAAAGCCTTGCT
GTACGGTAGAGATGCTCTGTTTGCGACGGTCCTGCTTGTTTATGCTGATGCTGCATCCATAACATGTTCTTGTAGGCCTA
ATAATCATACAATCCACCTCTCTCCTTTCCGTCGACCTGCGATTTTCGTGGAACATCCCCAGGGATTAAGGTTAAGATCA
GGCTG----CTTA-------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>chr5B_866
--------------------------------------------------------------------------------
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----------------------------------------------------------------------TTACTGAAAA
GTATTCCATTT-AAACTTCTGTGAACAACTCTTCATGTTTTTTCTTATCTACATATTCATATAATGCATCGGGAGAACTC
CTTGCCT-TTTTATCTACAGAAAAAGATCAACTCACAAGTTCAATTTGTATGCTTGGACAGGTGATCGGGAACAAGTGGG
ACCACTACCTCGATCTTCTCCAGGCCGACTACACTGAGGGGTAAACATTTATGCATCCTGGTTCCTGTTCTGTGGTTTGA
TT--GTGCAT-TTGTACTGGCTCTGCCTTTGATCCTGTTTTGGTGGATGA-GGCCTTGAGGAAGCCTGCATTTGCAATGT
CGGCTTCTTTTCGTTTTTAGCTACAATGGAACATGTTTCACTTCTATGTGAGGAAGTTATGCACACAAGTGTGATAGACT
GGTATGCTGTATATCTTGTGACGTACATGGTGCACCACTGAACACCGTAGCAGACCTGATCCATAATGAATAAACACTGA
AAACT---GGCTGTGTCATGCATCTTTTGATGCATTTGGGGGCCCTTATTAGTGTTCTGCTTCCCTGTTTTAGAT-----
------------------ATTTCACTGAACTGTCACCTTGACTGGGATGTGTGGAGCACTTAGAATTATGCCAGTGTTAA
ACCAAATGGCTAAGTCTGGATGATAGTTGCTATGTTTGCATCCTATGACGCGTTTTTCCCCGTGTTCAAAATTTTATCAT
ATTTTCTTAGTGTCGAACGTAACTAGGCACTTAAGAGTATGGCAGTATACTAATCTTTGTAGTCTTTGCAAAA--AAAAA
AAAATCATCTTTTTAGCCATGTGTACTCTCCATACACTGCTTGCTGTGTCGTAACGTTATGTTGGAATAATGTTGCGTAT
ATAGTAAATGGACGCTAGAAAGATGAAAAAAACAGAAGCTCATGATAAACTGTAAATTTTATTGCATGCGATTGTA----
TTAT----------TGTCGGTCTTAGCGAGGTACATAGAGTATAGTAAAAAAATGCCATCAGATTAGCCATATGTACTCC
CC---CCTACTCTGCAT-CTGTTTGACAATGAAATGATGTTATTGTGTAATAGT--------------------------
--------------------------------------------------------------------------------
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------------------------------------------ATGCTGTTTCTTGTTAACGAACAC--TAATGACAAGAC
AAATGTTCATGGTGTAAAATTGTAAATTAT----------------ATTACATACATATT-----------------GGA
GTCTACCGTTGAGTGTGGCTGTCTGGCTGAGATGCTTGGTTTGTGAAATGTTGG--------------------------
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>chr5B_2088
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-------------------------------------------------GTTGGAATCTTTGCTACTTGGTGTTCCACCT
GGACATTTGTGTCTATGTTTTTCTTCCCCATGCTTAAGGCCTAGATAATCACTATTGACACTTAATCTATGTATATCCCA
GTTGGTACTTATTTGTCAATACAGTTCCTGGAAAATAGAAGAGCATCTTTATCCTACCTA--TTTTATACTTTTCCAGAG
ATTCGAATTATTAGAAGGGA--CATTGGTTATGGTTTATTAGATAATTTT-TATTGTTAATATTGTATATCTTGTTTAAA
ACTGATATTCAAAATTTGGATTTAATACATCTTTCTGCTGTTGTATGTTGTTAGGGATGCTCTGGATGCCTTGGGCTTGG
TTCGCTACTGCTGCCGCCGTATGCTCATGACCCATGTTGACCTCATTGAGAAGTTGCTCAACTACAACAGTAAGTTGATG
CTGTTATGTAACTTTGTAAGCTATATTCTGCT---TCCTTTGTTA-TTTCTTTTGGAACTGACACTTGTTCATTTTCAGC
CCTGGAGAAGACGGAGACAAGTTGAAGTTAATTGAACCCATTCTGCCTCGAAACCTTTGTTCCTTTGTACTTTCCAAG--
-------ATGCTGTTTCTTGCGTCAGTGCTTAGGAGGTGCAAAGTGAGGCA--CTGAAATGAAGTTGGTTTGTTCATGAA
TCTCCAAGGACTGTTAGTGTGACCATGCGTTTCTACTATGTGATCTTCAA------------------------------
---GGCTATATTAACCAACAAGTCTATGCATTCTCCAGTTTCAGACTTATTAAGCTCCAAGCGTTGAACATGTTATTCCT
GTGCTTTCTGTTGGATGTTGTTGGTTGTGGGCACCCAT-------TTACCATTGAATCGTCACT--AGTGA---------
------TATGCATTGAACTTCCACATGTACCTTCATGCTTGA---TATTTGTTTGTTTTCTATTCCTCTGATGATATCGA
-TGTATCTAAAATCAAGATAGATAACTATTGCGGTTTTGAGCACATGCAAACAATGCTCATCGATGATTTGTTCGTGACT
GCTGTTAACTTGAATTGTCATCCATTCATCCACTTGTTGACCTAGGTGGTAATCATATTGCAAGGGTGTCATTCCCATCG
GTGTTGACCTATAGTGCAATCATCGTACTATTCATTGATGCATGCATAATTGCACATGCTTCTCTTAGTGAAGCCTCGTT
GTATGGTAGAGATGCTCGGTTTTCGACGGTCGTGCTTGTTTATGGTGATGCTGCATCCATAACATGTTCTTGTAGGCCTA
AT---CATACAATCCACCTTTCTCATTTCCGTTGACCTGCGAATTCCGTGGAACATCCCCAGGGATTAAGATTAAGATCA
CACCG----CTAAGCACGATCATTTAGTTTTATTA---GTGTATGTATTTCTGTAATATGCGCTTAAACTGGGTAGTTCA
ATCAGAGACATACACATCAATTTGAAAAATCCCTAAAAAATAAGTTTGAAAAAGCATCTACAGTTACTTCTCACCATAGC
GGATGCATAATTTATTCTAGAACCAAAATTCTCCAT-----GGTATTGTTTGGATGGGCAGTATTTTTCTTGGGATCTTA
TGTGTTCGTTTCAAATTTGA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------------------------
----------------------------S-------S------S------------------------S-----------
-----------------------S------------------------------------SS------------------
------------SSSS------------------------------S-----S--------------S------------
-S-----------S----------------------S-----------------------------------------S-
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S----S---------------------------------------------------------------
------------------------------------S-------------------------------------------
------------------------------------------------------S-------------------------
----------------------------------------------------------------S---------------
----------S----------------------------------S----------------------------------
--------------------------------------------------------------------------------
S------------------------------------S------------------------------------------
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-----------------------------------------------------S--------------------------
---S---------------------------------------------------------S---S--------------
--------------------------------------------------------------------------------
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-------------------------------S--S---------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------S-----
S-------------S-----S-------------------------------------------SS--------------
S------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-------------------------------------S-----------------S----------------S-------
--------------------------------------------------------------------------------
-----------------------------------------S-----------------------------S--------
--------------------
>forward_205
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-------------------------ACATCTCGTTGCCCTTCCTG-----------------------------------
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>reverse_1566
--------------------------------------------------------------------------------
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---------------------------------------------AGACGTGTTTTTCCCCGTGT---------------
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--------------------
>forward_847
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---------------------------GGTGTAGTTGTTGTGTGGCG---------------------------------
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--------------------
>reverse_3733
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----------------------------------------------------TGCTCCAAGCGTTGAACATG--------
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--------------------
