>input_sequence_47037
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---------------------------------------------------------------------ATGAAGGGGAC
GGCGCCATGGCGCAGGCTCGCCGAGGCCGAGGCCGCCGTCAACCGCTCCGTCGCGGCGAGCAGCGTCGGGAGGTATTTCA
AGCTTGAGGCGCGCAAGAGCTCCTTCACCAAGGAGCTGCGCGCCGGCGCCGCCACCTTCCTCACCATGGCCTACATCATC
TCCGTCAACGCCGCCATCCTCACCGACTCGGGCGGCCCGTGCACCGTGCTCGACTGCAGCCCGGTGGGTAACTCCACGGC
CGTTCCTGGGCCGGAGTGCACGCTGGGCACGTCCAACCCGGGTTACCAGCAGTGCTTGGCGCGCACCAAGAGCGACCTGA
TTGTTGCGACGGCTGTGGCTGCTATGGTTGGTTCCTTCGCCATGGGCACCCTCGCCAACCTCCCGCTGGCGCTGGCCCCC
GGGATGGGCGCCAACGCCTACTTCACCTACAACATGGTGGGCTTCCACGGCTCCGGCTCCATCCCCTACCGCACCGCGCT
CGCCGGCGTCATGATGGAGGGCATCATCTTCTTCCTCCTCTCGGCCGTCGGGCTCCGGTCCAGGCTGGCGCGGATGATCC
CGCGAAATATCCGCCTCGCCTCCGCCGTCGGGATCGGCTTGTTCCTAGCCTTCACCGGTCTCCAGGCGAACCAGGGCCTT
GGCATGGTGGGTGCGAGCCCGTCCACGCTGGTCACGCTCACCGCCTGCTCCCAAACCGACCCCGTCACCGGCGCCTGCCT
CGGCGGCACCTTGCACAGCCCCACGTTCTGGCTGGGCGTGGCCGGCTTCCTCGTCACCGCCACGTGCCTCGCCAGGGACG
TCAAGGGCGCCATGATATACGGCATAGTCTTCGTCACGGCCGTGTCTTGGATCAGAGGCACCAGCGTCACCGTGTTCCCG
GACACGCCGGCCGGCAATGCCGGCTTCTCCTACTTCAAGAAGGTGGTGGACTTCCACATGATCAAGACCACGGCCGGGCA
GCTCAGCTTCGGTGGCTTCCGCCATGGCAGCGTGTGGGTGGCCATGCTCACGCTGCTCTACGTCGACGTCCTCGACACCA
CCAGCACAATGTACTCCATGGCCGAGTACGGCGGGTTCACGGACGGGGCCGGCGGGTTTGAGGGCGAGTACCGGGCCTTC
CTCGTCGACGCCGGCTCCACGGTCCTCAGCGCCGGGCTCGGGAGCACCACGGTGACCACCTACATCGAGTCGACGGCGGG
GATCAGGGAGGGCGGCCGGACGGGGGTGACCGCGGTCACCGTGTCGGCCTTCTTCCTGGCGTCGCTCTTCTTCTCGCCGC
TGCTGATGAGCGTGCCGCCGTGGGCCGTGGGGCCGTCGCTGGTGCTGGTGGGCGCCATGATGATGCGCGTGGCCAAGGAG
ATCGAGTGGGGCGACATGAAGGAGGCCATCCCGGCGTTCGTCACCATGGCGCTCATGCCGCTCACCTTCTCCATCGCCAA
CGGCATCATCGCCGGCCTCGCCGTCTACGTCGCGCTGCACTGGTACGACTGGGCCGGCCTGGCGTGCGGCAAGGTGGGGA
AGGCGCTCGACGACCGCCGCCGGAACCAGGTCGCCGCTGCCACGCCGGAGGTCGGCC------CCGCCCCGGCGCAGGAC
GCCGTGTGA-----------------------------------------------------------------------
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>chr4A_1_TraesCS4A01G238500
AGCAGAAATTATACAAAGCTGGTGGAGATCATTAAAGCCC--GCTCAAGTTGTGAGATATAGATATATACCCAACGTTGT
AGTACGTCTTCAACTCCTTTTTGTGTTTTTAAC---------GCGCAACTTTGCCATGTAAACAAGCGTACGTACCCTAC
CTACGGGTTCATTCAAACAGGCTGCTGGAGTGCCTTCACCTACTCTATAATTTGGAATTGTTGGAATA-----------T
ACTAGCGTAAAGTATCTCGTGGCCTGCTTGGCTTGGCCAAACTTCTGACTTTTTCGCGGGAAGCCAGACACTTTGATTAA
CATAACCT-AGTGGATCATTAGTATCCAGTTCATTCAAGCAGGTACACAGGTGGTATTGGTGTTTTTTAGGACTGGTGT-
-ACACGCATCGTACGACTTCACTTT-GCAGCTTATAGAACGGAAATGCACCAAAACTGATGTATACATGTACACTAACTC
TTATCTACCACAACGAATTTATATGCTTAATCTATATAAATTGCAACATATTGAGATACTAGGTGTTGTAAACTCGCAAA
AAAAAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GATAGTTGT
TCCAGAACTTTTTCTTTTGTGGAAATAGTTTTTTTAAGAGTTTTGAGGAAATAGTTGTTCTAGACATTTGTGTACAACAG
GCACTACAATCTCTCTAAAAAAAAGACATGCACTAAGAAACAATACGTTAGAAGTAACCTAAAACTTGCCAAGTGCAAAC
CCCAGTTCCTGAAAGCGTGCAGCGACATTTGCGTCACGAAAGTGGTACACCAGTACGATGAGTTTCCTTTGGAC-AAAAA
T------AATAAATAACTGAAAGGCGGGCCCACTAAATTCTGTGTGGGCGCCGTTCCCGGGAAAAGAGGCCGTGAGTGGG
CCCACCTCCGTCGAGCTCCCTACTCGTGTTTTCGTATAAGAGCAGGGACGGACCCTCTTCCTCGGAACACCACCAATCTC
G----------CACAATCCTAATCCTAAGCAAGAGTCGAGAAACATCAGAGCAGAGCAAAA-CCCAGCCATGAAGGGGAC
GGCGCCATGGCGCAGGCTCGCCGAGGCCGAGGCCGCCGTCAACCGCTCCGTCGCGGCGAGCAGCGTCGGGAGGTATTTCA
AGCTTGAGGCGCGCAAGAGCTCCTTCACCAAGGAGCTGCGCGCCGGCGCCGCCACCTTCCTCACCATGGCCTACATCATC
TCCGTCAACGCCGCCATCCTCACCGACTCGGGCGGCCCGTGCACCGTGCTCGACTGCAGCCCGGTGGGTAACTCCACGGC
CGTTCCTGGGCCGGAGTGCACGCTGGGCACGTCCAACCCGGGTTACCAGCAGTGCTTGGCGCGCACCAAGAGCGACCTGA
TTGTTGCGACGGCTGTGGCTGCTATGGTTGGTTCCTTCGCCATGGGCACCCTCGCCAACCTCCCGCTGGCGCTGGCCCCC
GGGATGGGCGCCAACGCCTACTTCACCTACAACATGGTGGGCTTCCACGGCTCCGGCTCCATCCCCTACCGCACCGCGCT
CGCCGGCGTCATGATGGAGGGCATCATCTTCTTCCTCCTCTCGGCCGTCGGGCTCCGGTCCAGGCTGGCGCGGATGATCC
CGCGAAATATCCGCCTCGCCTCCGCCGTCGGGATCGGCTTGTTCCTAGCCTTCACCGGTCTCCAGGCGAACCAGGGCCTT
GGCATGGTGGGTGCGAGCCCGTCCACGCTGGTCACGCTCACCGCCTGCTCCCAAACCGACCCCGTCACCGGCGCCTGCCT
CGGCGGCACCTTGCACAGCCCCACGTTCTGGCTGGGCGTGGCCGGCTTCCTCGTCACCGCCACGTGCCTCGCCAGGGACG
TCAAGGGCGCCATGATATACGGCATAGTCTTCGTCACGGCCGTGTCTTGGATCAGAGGCACCAGCGTCACCGTGTTCCCG
GACACGCCGGCCGGCAATGCCGGCTTCTCCTACTTCAAGAAGGTGGTGGACTTCCACATGATCAAGACCACGGCCGGGCA
GCTCAGCTTCGGTGGCTTCCGCCATGGCAGCGTGTGGGTGGCCATGCTCACGCTGCTCTACGTCGACGTCCTCGACACCA
CCAGCACAATGTACTCCATGGCCGAGTACGGCGGGTTCACGGACGGGGCCGGCGGGTTTGAGGGCGAGTACCGGGCCTTC
CTCGTCGACGCCGGCTCCACGGTCCTCAGCGCCGGGCTCGGGAGCACCACGGTGACCACCTACATCGAGTCGACGGCGGG
GATCAGGGAGGGCGGCCGGACGGGGGTGACCGCGGTCACCGTGTCGGCCTTCTTCCTGGCGTCGCTCTTCTTCTCGCCGC
TGCTGATGAGCGTGCCGCCGTGGGCCGTGGGGCCGTCGCTGGTGCTGGTGGGCGCCATGATGATGCGCGTGGCCAAGGAG
ATCGAGTGGGGCGACATGAAGGAGGCCATCCCGGCGTTCGTCACCATGGCGCTCATGCCGCTCACCTTCTCCATCGCCAA
CGGCATCATCGCCGGCCTCGCCGTCTACGTCGCGCTGCACTGGTACGACTGGGCCGGCCTGGCGTGCGGCAAGGTGGGGA
AGGCGCTCGACGACCGCCGCCGGAACCAGGTCGCCGCTGCCACGCCGGAGGTCGGCC------CCGCCCCGGCGCAGGAC
GCCGTGTGACCGGATAAAC-----------------------TTGTTTCCTCCTCGTGTCTCTTCTCTAGCTGCTAGTTG
ATGATGGTTAGTTTGGACACAGAGCATCATCGTGATCCGTGACATGGGATTAGGACTACTGTATGTACTGGTAGTAGCAA
CTGTAGT--------------------TGTGCTTGGAAAAGGCGGCAGTGGGAACGGTCTCGTCTCGTTTGAGATTCTTG
ATGTGCAAGGACCCATGATG------TTTGTGTACTTTGACGGCCATGATGGCAATGCTCACATTGATTTCGCTAGCCAG
CACGTTTGTTTTCGTA-----------------TAAGTTGTACTGGCAGGTTTTGCTTGCATAGAGGTCAAACCTATCAT
TACTCGCAGGACGCCTCCAAAAGGAG---AGAACTTTGAGATTGGTATATGCGATGAACTCCAAGGTTACTACTGTTCGA
CAGTCAAAAAACACTAGTATCGGATGCAACTTGTGAGCAGCACGTCATGATCTCTTGTCTTGTGAGGTTATTTTCTTCTC
AAGTCAAGCGTGAAAGTGAAAGTGTAATAAAAGGT----TTTCGGTGCTCGCGTCGCGTGGAGCTGCAAAACTTGCCGTG
TACCCAACTCCTGGCTGCTGCGTCATGGGCACGTACGCT-----GTATATAGTTACTGTCAGCGTGTTCGATTGCTCGCT
GGAAAACGAACGGAGTGGGAACTGAGA---------------AGCTCAGCTCAGGAGATAAGCCACAGGTGCGTATCATG
ACAGGGATGAAGAGGATATTTTGCGTGTGGATTGGGGA-TGTCTTAAGGCTGACGACGGCTGCTGCTTTCCTTCAAAAAA
ATCGATTCCCTGCCACGTAATCTTTTTCCCTCCAGTAAAACCATCTGCATCTGGACGTGGTTCGAAAGCTGGATGGGCCC
TATTGCCGGAAATGTGTGGTCTGGTGTCTCGCAAGTCAATGATTCCGAGAATATAGCTTCGACTTGTCCTCTC--GTGTT
ATCGGAGCCCCAA----GGTTCAAGTAAACCTAAAACTGTTCATGCGCCTGGATGCTCTGTTAAGTTAA
>chr4B_1
AGAAGAAATTACACAAAACTGGTGGAGATCATTAAAGCTC--GCCCAAGTTGTGAGATATATATACCA------AAC-GT
TGTACGCCTTCAACTCCTTTTTGTGTTTTTAAC---------GCACAACTTTGCCCTGTAAACAAGCGTAC----CCTAC
A-----GTTGATTCAAACAGATTGCTGGAGTA-CTTCAGCACCTCTATAATTTGAGATTGTTGGAATA-----------T
ACTACCGTAAAGTATCTCGTGGCCTGCTTGGCTTGGCCAAACTTCTGACTTTTTCGTGGGAAGCCAGACACTTTGATTAA
CATAATGGGAGTGGATCATTAGTATCCAGTTCATTCAAGCAGGTACACAGGTGGGATTGGTGTTTTATAGGACTGATGTA
CACACGCATCGTACAACTCCACTTTTGCAGCTTATAAAACGGAAATGCACCAAAACTGATGTATACATG-------ACTG
CTATCTACCCCAACGAACTTATATACTAAATCTATATAAAATGCAACATATTGAGATACTAGTTGTTGTAAACTCGAAAA
AAAA-TAGTTTTCTTTTGCAGGAAAAACTTTTGACTTATTCATAAAACACCAATGCCGGTACAAATAACAGTCCAAGTAA
CAGAAATTACATCCTTGTTCATAGACTACGTAATAACAATTACAAGCACTCGAGCGATCCGAAAGCGTGCCGGCGG----
----AATCGGGTAAACCTTATTGTAGTAGGTAGTCGGGATGATTTTTT-----TTTAGCCAAAGTTAAGATGATATTTGT
TCCAGAACTTTTTCTTTTGAGGAAATAGTT--------------------------GTTCTAGACATTTGTATATAAGAG
GCACTACAATCTCTCT--AAAAAAGACGTGCACTAAGAAACAATACGTTAGAAGTAACCTAAAACTTGCCAAGTACGAAC
CCCAGTTCCTGAAAGTGTGCAGCGACATTTGCGTCACGAAAGTAGT--ACCAGTACGATGAGTTTCCTTTGGACGAAAAA
T------AATAAATAACTGAAAAGTGGGCCCACTAAATTCTGTGTGGGCGCCGTTCCCGGAAAAAGAGGCTGTGTGTGGG
CCCACCTCCATCCATCTCCCTACTCATGTTTTCGTATAAGAGCAGGGACGGACCCTCTTCCTCGGAACACCACCAATATC
GCCCAAGTCTCCACT-CCCTAATCCTAAGCAA-----GAGAAACATCAGAGCAGAGCAAAAACCCAGCCATGAAGGGGAC
AGCACCATGGCGCAGGCTCGCCGAGGCCGAGGCCGCCGTGAACCGCTCCGTCGCGGCAAGCAGCGTCGGGAAGTACTTCA
AGCTTGAGGCCCGCAAGAGCTCCTTCACCAAGGAGCTGCGCGCCGGCGCCGCCACCTTCCTCACCATGGCCTACATCATT
TCCGTCAACGCCGCCATCCTCACCGACTCCGGCGGGCCGTGCACCGTGCTCGACTGCACCCCGGTGGGCAACTCCACGGC
CGTTCCTGGGCCGGAGTGCACGCTGGGCACGTCCAACCCGGGATACGAGCAGTGCCTGGCGCGCACTAAGAGCGACCTGA
TCGTCGCGACGGCTGTGGCTGCCATGGTCGGCTCCTTTGCCATGGGCACTCTCGCCAACCTCCCGCTCGCGCTGGCCCCC
GGGATGGGCGCCAACGCCTACTTCACCTACAACATGGTGGGCTTCCACGGCTCGGGCTCCATCCCCTACCGCACGGCGCT
CGCCGGCGTCATGATGGAGGGCATCATCTTCTTCCTCCTGTCCGCCGTCGGGCTCCGGTCCAGGCTGGCGCGGATGATCC
CGCGAAATATCCGCCTCGCCTCCGCCGTCGGGATCGGCTTGTTCCTGGCCTTCACCGGTCTCCAGGCGAACCAGGGCCTT
GGCATGGTGGGCGCGAGCCCGTCCACGCTGGTCACACTCACCGCGTGCTCCCAAACCGACCCCGTCACCGGCGCCTGCCT
CGGCGGCACCTTGCACAGCCCCACGTTCTGGCTGGGCGTGGCCGGCTTCCTCATCACCGCCACATGCCTCGCCAGGGACG
TCAAGGGCGCCATGATATACGGCATAGTGTTCGTCACGGCCGTGTCTTGGATCAGAGGCACCAGCGTCACGGTGTTCCCG
GACACGGCCGCCGGCAATGCCGGTTTCTCCTACTTCAAGAAGGTGGTGGACTTCCACATGATCAAGACCACGGCCGGGCA
GCTCAGCTTCGGCGGCTTCCGCCACGGCAGCGTCTGGGTGGCCATGCTCACGCTGCTCTACGTCGACGTCCTCGACACCA
CCAGCACAATGTACTCCATGGCCGAGTACGGGGGGTTCACCGACGGGGCCGGCGGGTTCGAGGGCGAGTACCGGGCCTTC
CTCGTCGACGCCGGCTCCACGGTCCTCAGCGCCGGGCTCGGCAGCACCACGGTGACCACATACATCGAGTCGACGGCTGG
GATCAGGGAGGGCGGCAGGACGGGGGTGACCGCGGTCACCGTCTCGGCCTTCTTCCTGGCGTCGCTCTTCTTCTCGCCGC
TGCTGATGAGCGTGCCGCCGTGGGCCGTCGGGCCGTCGCTGGTGCTGGTGGGCGCCATGATGATGCGCGTGGCCAAGGAG
ATCGAGTGGGGCGACATGAAGGAGGCCATCCCGGCGTTCGTCACCATGGCGCTCATGCCGCTCACCTTCTCCATCGCCAA
CGGCATCATCGCCGGCCTGGCCGTCTACGTCGCGCTGCACTGGTACGACTGGGCCGGCCTCGCGTGCGGCAAGGTGGGGA
AGGCGCTCGACGACCGGCGCCGCAACCAGGTCGCCGCTGCCACGCCGGAGGTCGGCCCCGCCCCCGCCCCCGCGCAGGAC
GTCGTGTGACCGTGTCCGTGTGAGGAGGATAAACAAACTTTGTTGTTTCCTCCTCGTGTCTCTTCTCTAGCTGCTAGTTG
ATGATGGTTAGTTTGGACACAGAGCATCATCGTGACAT-----ATGGGATTAGGACTACTG---------GTCGTAGGAA
CTGTGGTAGTAGTGGCTCTAATCTATCTGTGCTTGGAAAAGGC---AG---------------CTCGTTTCAGATTCTTG
ATGTGCAAGGAAAGGACCGGCGATGTTTTGTGTACTTTGACGGCCATGATGGCAATGCTCACATTGATTTCGCTAACTAG
CACGTTTATTTTCTGATTTCTGATGGATTTGAGTAAATTGTACTGGCAGGTTTTGCTTGCATAGAGGTCAAAGCTATCAT
TACTTGTAGGACGTATGATGGCCTCCAAAAGAACTTTGAGATTGGTAT--GCGATGAACTCAATCGGCAGTC--------
---------AACAGTAGTATCGGATGCAACTTGTGAGCAGCACGTCATGATCTC-----TTATGAGGTTATTTTCTGCTC
AAGTCAAGCGTGAAAGT---------ATAAAAGGAAGGATTTCAGTGCTTGCGTCGCGTGGAGCTGCAAAACTTGCCGTG
TACCCAACTCCTGGCTGCTGCGTCATGGGCACGTACGCT-----GTATGTAGTTACTGTCAGCGTGTTCGATTGCTCGCT
GGAAAACGAACGGAGTGGGAACGAAGGAGCTCAGCTCAGCTCAGCTCAGTTCAGGAGATAAGCCACAGGTGCGTATCATG
ACAGGGATGAAGAGGATATTTTGCGTGTGGATTGGGGTGTGTCTGAATGCTGACGATGGCTGCTACTTTCCCTCAAATTG
ATTGATTCCCTGCCACGTAATCCTTTTTCCTCCGGTAAAATCATCCGCATCTGGACGTGGTTCCAAAGCTGGATGGGGCC
TATTGCCGGAAATGTGCGGTCTGGGCCTCGGG-AGTCAATGATTCCGAGAATATAGCTTCGACTTGTCCTCTCTCGTATT
ATCGGATCCTCAA----GGTTCAACAAAATCTGAAACTGTTCATGCGCCTGAATCCTCTGTTAAGTTAA
>chr4D_1
AGCAGAAATTATACAAAGCTGGTGGAGATCATTAAAGCTCTCGCTCAAGTTGTGAGAGATATATATATATACCCAAC-GC
TGTACGCCTTCAACTCCTTTTTGTGTTTTTAACGTACTGGTTGCACAACTTTGCCCTGTAAACAAGCGTACGTACCCTAC
A-----GTTCATTCAAACAGATTGCTGGACTG-CTTCACCTACTCTATAATGTGCGTTAACAAACACATTGGAATATACT
ACTACCGTAAAGTATCTCGTGGCCTGCTTGGC-----CAAACTTCTTACTTTTTCGCGGGAAGCCAGACACTTTGATTAA
CATAACGT-AGTGGATCATTAGTATCCAGTTCATTCAAGCAGGTACACAGGTGGTATTGGTGTTTTTTAGGACTCATCT-
-ACACGCATCGTACAACTTCACTTT-GCAGCTTATAAAACGGAAATGCACCAAAACTGATGCATACATGTGCACTAACTG
CTATCTACCACAACGAACTTTTATACTAAATCTATATAAATTGCAACATGTTGAGATACTAGTTGTTGTAAACTCGAAAA
GAAGGTAGTTTTCTTTCGCGGGGAAAACTTTTGATTTATTCGTATAACATC-ATGCCAGTACAAATAACA-TCGAAGTAA
CAGAAATTACATCCATGTAGACTAG-TACATAGCAACAATTACAAGCACTCGAGCGAGCCGTTGTCATCGGCTCTCCCTC
ACCAAAACCGGGTAACCTTATTGTAGTAGACAGTCGAAATGATAAAAGAAAAATTAAGCCCAACTCGAGATGATATTTC-
--------------------------------------------------------------------------------
--------------CTAAAAAAAAGACATGCACCAAGAAACAATACGTTAGAAGTAACCTAAAACTTGCCAAGTGCAAAC
ATCAGTTCCTGAAAGTGTGCA---------GCGTCACAAAAGTAGT--ACCAGTACGATGAGTTTCCTTTGTGTACAAAA
ACAAATAAATAGATAACTGAAAAGTGGGCCCACTAAATTCTGTGTGGGCGCCGTTCCCGGGAAAAGAGGCTGTGAGTGGG
CCCACCTCCGTCGATCTCCCTACTCATGTTTTCGTATAAGAGCAGGGACGGACCCTCTTCCTCGGAACACCACCAATCTC
G----------CACT-TCCTAATCCTAAGCAA-----GAGAAACATCAGAGCAGAGCAAAAACCCAGCCATGAAGGGGAC
GGCACCATGGCGCAGGTTCTCCGAGGCCGAGGCCGCCGTGAACCGCTCCGTCGCGGCAAGCACCGTCGGCAAGTACTTCA
AGCTTGAAGCGCGCAAGAGCTCCTTCACCAAGGAGCTGCGCGCCGGCGCCGCCACCTTCCTCACCATGGCCTACATCATC
TCCGTCAACGCCGCCATCCTCACGGACTCCGGCGGGCCGTGCACCGTGCTCGACTGCACCCCGGTGGGTAACTCCACCGC
CGTTCCTGGGCCGGAGTGCATGCTGGGGACTTCCAACCCGGGGTACGAGCAGTGCCTGGCGCGCACCAAGAGCGACCTGA
TCGTCGCGACGGCTGTGGCCGCCATGGTCGGCTCCTTCTTCATGGGCACTCTCGCCAACCTCCCGCTCGCGCTGGCCCCC
GGGATGGGCGCCAACGCCTACTTCACCTACAACATGGTGGGCTTCCACGGCTCGGGCTCCATCCCCTACCGCACGGCGCT
CGCCGGCGTCATGCTGGAGGGCATCGTCTTCTTCCTCCTGTCGGCCGTCGGGCTCCGGTCCAGGCTCGCGCGGATGATAC
CGCGAAACATCCGCCTCGCCTCCGCCGTCGGGATCGGCCTGTTCCTGGCCTTCACCGGTCTCCAGGCGAACCAGGGCCTT
GGCATGGTGGGCGCGAGCCCGTCCACGCTGGTCACGCTCACCGCCTGCTCCCAAACCGACCCCGTCACCGGCGCCTGCCT
CGGCGGCACCTTGCACAGCCCCACGTTCTGGCTGGGCGTCGCCGGCTTCCTCATCACCGCCACGTGCCTCGCCAGGGACG
TCAAGGGCGCCATGATATACGGCATAGTCTTCGTCACGGCCGTGTCCTGGATCAGAGGCACAACCGTCACGGTGTTCCCG
GACACGCCGGCCGGCAATGCCGGCTTCTCCTACTTCAGGAAGGTGGTGGACTTCCACACGATCAAGAGCACGGCCGGGCA
GCTCAGCTTCGGCGGCTTCCGCCACGGCAGCGTGTGGGTGGCCATGCTCACGCTGCTCTACGTCGACGTCCTCGACACCA
CCAGCACAATGTACTCCATGGCCGAGTACGCCGGGTTCACCGACGGGGCCGGCGGGTTCGAGGGCGAGTACCGGGCCTTC
CTCGTCGACGCCGGCTCCACGGTCCTCAGCGCCGGGCTCGGGAGCACCACGGTGACCACCTACATCGAGTCCACGGCGGG
GATCAGGGAGGGCGGCAGGACGGGGGTGACCGCGATCACCGTCTCTGCCTTCTTCCTGGCGTCGCTCTTCTTCTCGCCGC
TGCTGATGAGCGTGCCGCCGTGGGCCGTCGGGCCGTCGCTGGTGCTGGTGGGCGCCATGATGATGCGCGTCGCCAAGGAG
ATCGAGTGGGGCGACATGAAGGAGGCCATCCCGGCCTTCGTCACCATGGCGCTCATGCCGCTCACCTTCTCCATCGCCAA
CGGCATCATCGCCGGGCTGGCCGTCTACGTCGCGCTGCACTGGTACGACTGGGCCAGCCTGGCCTGCGGCAAGGTGGGGA
AGGCGCTCGACGAC---CGCCGCAACCAGGTCGCCGCTGCCACGCCGGAGGTCGGCC------CCGCCCCCGCGCAGGAC
GTCGTGTGACCGTGTCCGTGTCCCTGTGAGGATAGACTTCCTCGTA--------------------------GCTAGTTG
ATGATGATTAGTTTGGACACAGAGCATCATG-------GTGACATGGGATTAGGACTACTG---------GTAGTAGGAA
CTGTAGT--------------------TGTGCTTGGAAAAGGC---AGTGGGAACG-----GTCTCGTTCGAGATTCTTG
ATGTGCAAGGAGGTGTT-------------TGTACTTTGACGGCCATGATGGCAATGCCCACATTGATTTCGCTAGCTAG
CACGTTTATTTTCTC-------ATGGATTTGAGCAAATTGTACTGGCAGGT-----------------CAAAGCTATCAT
TACCTGCAGGACGTATGATCGCCTCCAAAAGAACTTTGAGATTGGTAT--GCGATGAACTCGATCGACAGTC--------
---------AACAGTAGTATCGGATGCAACTTGTCAGCAGCACGCCATGGTC-----TCTTGTGAGGTTATTTTCTTCCC
AAGTCAAGCGTGAAAGT---------ATAAAAGGT----TTTCAGTGCTGGCGTCGCGTGGAGCTGCAAAACTTGCCGTG
TACCCAACTCCTGACTGCTGCGTCATGGGCACGTACGCTGCGCTGTATATAGTTACTGTCAGCGTGTTCGATTGCTCGCT
GGAAAACGAACGGAGTGGGAACGGAGGACCTC----------AGCTCAGCTCAGGAGATAAGCCACAGGTGCGTATCATG
ACAGGGATGAAGAGGATATTTTGCGTGTGGATTGGGGA-TGTCTCAAGGCTGACGACGGCTGCTGCTTTCCTTAAAAAAA
ATCGATTCCCTGCCACGTAATCTTTTTTCCTCCGGTAAAACCATCTGCATCTGGACGTGGTTCGAAAGCTGGATGGGGCC
TATTGCCGGAAATGTGTGGTCTGGTGTCCCGCAGGTCAATGATTCGGAGAATATAGCTTCGTCTTGTCCTCTC--GTATT
ATCGGATCCCCAGGGTTGGTTCAACCAAATCTCAAACTGTTCATGCGCCTGGATCCTCACTCAAGTTAA
>SNPs
--------------------------------------S----------------------S-------SS-SSSSSS--
S-----S-------------------------------------S----------S------------------------
SSSSSS--------------SS----------S---------------------SS------------------------
----S---------------------------------------------------------------------------
------S--------------------------------------------------------------------S----
--------------S---------------------S---------------------------------S--------S
S----------------S------S--S----------------------------------S-------------S---
----SS--------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-------------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSS---------------S--S--S--
--------------------------------------------------------------------------------
---------------S---------------------------S--SS--------------------------------
----------------------S-S---------------------------------------------S---------
--------------S----------S------------------------------------------------------
--------------SS----------------SSSSS-------------------------------------------
---S-----------------------------------S-----------------S-------------S---S----
--------------------------------------------------------------------------------
-----------------------------S-----S----------------------S---------------------
------------------------------------------S---S--------S------------------------
-S--S-----------------S-----S--S-----------------S-----------------S------------
-----------------------------------------------------S--------------------S-----
---------------------------------------S----------------------------------------
----------------------------------------------S---------------------------------
-----------S--------------------------------------------------------------------
----------------------------------------------------S---------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
------------S-----------S-------------------------------------------------------
----------------------------------------S-----------------S---------------------
--------------------------------------------------------------------------------
----------------S-------------------------S-------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
----------------S-----S-----------------------------------------------S---------
-S----------SS-SSSS-------------------------------------------------------------
-----------------------------------SSS-----------------------SSSSSSSSS-------S--
-------------------------------------------SSS----------SSSSS-------------------
-----------SSSS-SSS----------------------------------------------------------S--
-------S-----SS---------------------S-----------------------------------S-------
----S--------SS-SSSSSSSSSS----------------------SS-----------S-SS-SS-S-SSSSSSSSS
SSSSSSSSS----S----------------------------------------SSS-----------------------
-----------------SSSSSSSSS-----------------S-----S------------------------------
--------------------------------------------------------------------------------
----------------------S---S-----------------------------------------------------
--------------------------------------------S-----------------------------------
---------------------------S-----S-------------------------------------------S--
----------------------------S------------------------------------------------S--
------S-----------------SS---S--S---------------------S--------------
>forward_1215
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---------------------------------------------------------------------------AACAC
CACCAATCTCGCACA-----------------------------------------------------------------
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>reverse_3139
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------------------TGTTTGTGTACTTTGACGGCC-----------------------------------------
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