>input_sequence_47019
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATGGATTCCACTGCCGACCTCAAGGGCAAGCG
CCCTCTCTTGCAGCCTGACGACGTGTCTGCCGCCGCCGCTGCCGCGGCGGTGCCGGAT------GAGGCGGAGGCGAAGC
CCTCGTCTTCTTCGGAGGAGGTGAAGGAGGCGGAGCCGGGGACAGAGAAGCAGGAGGAAAAGCCCGCCTTGGTGCTGGTG
GCCGAGGACGGCGTGGAGGTGTGCATCTCGGAGCCCGCGGCGCGGATGTCGCAGATGCTCAGCCACATGATGGAGGACGG
CTGCGCTGACGGCCGCATCCCAACCGCCAACATCCACTCCGACATCCTCGAGATGGTCGTTGAGTACTGCGAGAAGCACG
GGCCGTTCTACGACCCCGAGGCCTCTGAGCGCGACCGGTACCCCTTCCCGCCCTTCCCCGTCGAGCTCACCCCTACCGTC
TCCTCCATCAAGCCCGTCACCTACGTCGACCCGGACCCCCACGGTCTCAAGGACTGGGACAGCGACTTCATCTCCCTCGA
CAACTCCACCCTCTTCGAGATCATCCTGGTAAAGCGACCTAGCCGATTGTTTACATTCTTTGCTCTATATTCTACCCCAA
GTAAGAAAATGCGATGAAATCGAAATCTTTATGAGTAGTATGTGTTGTGAATAGCAACGATGGTATATGTGCAAATAGAA
GGAAAGTTCGGTCGGTAACTGTGCGCACAATGTGGAATAGCTCATAGATTTTGATAACGGTTGCAGACTCCAAACATGAC
TACATAGATAAAATAGTTGAACAGAAAAATGGCCAGTAACCATGATCATTTGGCAAATGGGGCAAATGTATTACTATGAT
TTTTCTTTTCACGAATATGCAAAAGACTTGTGTATTACTCCCTCCGTATCAAAATATAAGACGTTTTCTGACACTAAAAA
ACGTCTTATATTTTGA--CACAGGGAGTATTTCATTACTAGGGAGGTCATTA-CAGACACATACATGTGCTCATACAATA
TGACGCATACATGGGTGCTCAACGGAGCACAACCGGAGGAGTGCAATTGATTAAGAATCTACG-----------------
-------ACCTATGCGCATTATGATGTGAGAATCAGAACTACAGGGAACATAATGTATGGAATGTTTTGGTCATGATGCA
AATTATAGATGTGAAATGTTGGAAGGAGCATCAATAATTGTCCAAAGAGTTTAATTAATTTTACAAACCACAATAAAATT
GTATAGGAAGGAAGCAATATTTGATTGAACAGAGAGGAATTAAGAGAGATAGATAGAGGGAACGGGCATAGGAAAGTCTA
TGTGTCAGTGATTTGTTAGATCTGATGTGCACAGTGCAGTGAA-------TTTTTTTGTGTGTGTTTGTGGTGGTTAATT
GTAATGGTGGCAAAATAACTAGTGTGGTTTTTCTATGCAAGATATATAGATTGGGGATAAATTTATTTGATTGGGGTTTG
TGCAGGCCGCAAACTACTTGAACATTGAGGATCTGCTGGACCTGGGCACCTCGGCTGTGGCTGACAAGATGAGGGGGAAA
AAGCCAGAGGAGATCCGTGAAATCTTTGAGATCGAGAACGACTACACACCAGAGCAGGAGGCTGAAGTCAGGAAGGAGAA
TGCATGGGCCTTTGAGAACTAA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>chr1A_1_TraesCS1A01G129800
TGGAGTAGGTCCGATCTGTAGGAGGACCCGACATGACAGAGGCATCTAGGCGTCCCCAAATTCGCCTCAGATATGTATTG
GGTTTCACGGTTGCCGAATAACACACATGCTTGATGTGACTTTGAGAAATCTGGTTGGATGCCTATTTTGTGAGCGAGCA
CAGACCGAGTTGTTCGCTCGAATGTTTGGAGAAGGGTCTGCCGGTTGCAGATGTTCTTATGGTGCTAAACCAGATAGAGG
AAAACTTGTTTCCTAAGTGAACTGAGCTTAGCTCAGATGGTTTGGTTCCTTGTGCTGGAACCAGTCCATGGGGTTCAAGT
TTTAGACTTGATACTGTGTATGCATTTTTCTGGATTTATTTCAGTCATTTCTGCGATGTTCGTTCAGTGAGAGGAGACAT
TTTCGTCAAGTGCGAGACGTCTACGATGACTACTTTAATCCAAGATATTGTGCTGAGCCACGATTTGAAATGTGTTTATA
GAGATCGAGTGTGCATACATGCATTTAAAGCAACCTATGCAATTCTAAATACCACCCGTTATCCAAAGAAAAAAACCTAT
GCGCCGCCGGTTCCCCGCCTCCCCTTCCCCTCCTCCCCCGCCGCCGCCGACAGCCGTCGTCGGGCTTGCTCATGCGGCGG
TAGGCGGCGGCGGGGGCTTCCCCGCGCACCCGCCTCGACCTCTAGAGAGCCCCCCACCCCGCATTCGGCATCGCCGCCCG
CTTCCCCTGCTCCCCTGGTGGCCGCTGAGGCCAGCCCTCTGCGGCGGCTGTAGCCGCCGGTGTTGTCGCCCCGCGCCTGC
CCTGCGTCGAGTTGTTTAGGACAGATCCCCCCGTCAGATCCGGCCGCCTCGGCCCTAGGATCGGGGCCAGCTACTCCGAT
CTGGCGGCTGGTGGGCCCTCGTTCTTTGGATAACGTTTTTTTTTTGGAAGACCCCCGGTTGAAGTTCTTTCCCTTCCCTA
CAAACGCGAAGAAACC--------CCAAATCCCCCAAAGCCCCCAACCATGGATTCCACTGCCGACCTCAAGGGCAAGCG
CCCTCTCTTGCAGCCTGACGACGTGTCTGCCGCCGCCGCTGCCGCGGCGGTGCCGGAT------GAGGCGGAGGCGAAGC
CCTCGTCTTCTTCGGAGGAGGTGAAGGAGGCGGAGCCGGGGACAGAGAAGCAGGAGGAAAAGCCCGCCTTGGTGCTGGTG
GCCGAGGACGGCGTGGAGGTGTGCATCTCGGAGCCCGCGGCGCGGATGTCGCAGATGCTCAGCCACATGATGGAGGACGG
CTGCGCTGACGGCCGCATCCCAACCGCCAACATCCACTCCGACATCCTCGAGATGGTCGTTGAGTACTGCGAGAAGCACG
GGCCGTTCTACGACCCCGAGGCCTCTGAGCGCGACCGGTACCCCTTCCCGCCCTTCCCCGTCGAGCTCACCCCTACCGTC
TCCTCCATCAAGCCCGTCACCTACGTCGACCCGGACCCCCACGGTCTCAAGGACTGGGACAGCGACTTCATCTCCCTCGA
CAACTCCACCCTCTTCGAGATCATCCTGGTAAAGCGACCTAGCCGATTGTTTACATTCTTTGCTCTATATTCTACCCCAA
GTAAGAAAATGCGATGAAATCGAAATCTTTATGAGTAGTATGTGTTGTGAATAGCAACGATGGTATATGTGCAAATAGAA
GGAAAGTTCGGTCGGTAACTGTGCGCACAATGTGGAATAGCTCATAGATTTTGATAACGGTTGCAGACTCCAAACATGAC
TACATAGATAAAATAGTTGAACAGAAAAATGGCCAGTAACCATGATCATTTGGCAAATGGGGCAAATGTATTACTATGAT
TTTTCTTTTCACGAATATGCAAAAGACTTGTGTATTACTCCCTCCGTATCAAAATATAAGACGTTTTCTGACACTAAAAA
ACGTCTTATATTTTGA--CACAGGGAGTATTTCATTACTAGGGAGGTCATTA-CAGACACATACATGTGCTCATACAATA
TGACGCATACATGGGTGCTCAACGGAGCACAACCGGAGGAGTGCAATTGATTAAGAATCTACG-----------------
-------ACCTATGCGCATTATGATGTGAGAATCAGAACTACAGGGAACATAATGTATGGAATGTTTTGGTCATGATGCA
AATTATAGATGTGAAATGTTGGAAGGAGCATCAATAATTGTCCAAAGAGTTTAATTAATTTTACAAACCACAATAAAATT
GTATAGGAAGGAAGCAATATTTGATTGAACAGAGAGGAATTAAGAGAGATAGATAGAGGGAACGGGCATAGGAAAGTCTA
TGTGTCAGTGATTTGTTAGATCTGATGTGCACAGTGCAGTGAA-------TTTTTTTGTGTGTGTTTGTGGTGGTTAATT
GTAATGGTGGCAAAATAACTAGTGTGGTTTTTCTATGCAAGATATATAGATTGGGGATAAATTTATTTGATTGGGGTTTG
TGCAGGCCGCAAACTACTTGAACATTGAGGATCTGCTGGACCTGGGCACCTCGGCTGTGGCTGACAAGATGAGGGGGAAA
AAGCCAGAGGAGATCCGTGAAATCTTTGAGATCGAGAACGACTACACACCAGAGCAGGAGGCTGAAGTCAGGAAGGAGAA
TGCATGGGCCTTTGAGAACTAAAAGATGATGGTTGATCTATCTTTTGTCTATGCTGCTATTCTTGGTTTCAAGTACAAGT
CCTTACCTCCAGTTCTGTTCCAAGTAGTTTGATAGATAGATAGATAGATGGATGAGTCGGTGAAAATAGAAAACTGAGAA
GCACCGTATGGGTTAGT--TAATCATTGTATACAGCAGAGTTTTGGTGTGAATTGTGGATGTGTGGATGGATGGTTTCGA
AATGGTTGAATCGGCAGAACCTTAATGGCAACCTGTGTTCAATTAAGTTATACTATTCGCCAATTGCACATTTTTTGCAG
TTAAGTTGTTGCTGGATCGTATCTTGGATAACCTGTTTGGTTACATTTTATTGTTGGTGTTGCCATGCTTGGCCTTATCT
ACGTATTGGGAACCTGTGTGTTGTACACAATTAATTCTGTAGAGTAGGACACAGTTGTTTGGTCTGAGCAGAAATTATCA
CCTTGAGTTTATAGATAAGTTGGAGAAAACTGCAGACTAGGGTACAAATTAAGCTTGTAACA------------------
------------------------------------------------TATGATGCATGTTTTTTTGTGTAAATGTCTCC
TGTCTGTTGAGAAATGTTTGTGGTTTTTGAGCAAGGCTTTGTAACAGGGGAAAATGCAGTATATACAAACTAGACTTGGT
GCTTGTATAGTGTTTAATTTAAT--ATAGTTTTGGCCATTTGAAACTTGGTAAACTATTCTATCTATTCGTAGTTTGTAT
TATCTTGTAGGCATGTATAGAATTTTCATATTAATATATGGCTGTTGCCTGCGAAGGACATT------------------
---------------------CATGTTCTAACTTGCAAGAGATGCATAGAAGATACATCAGGTACTAGCATCTTTCCATT
CTGTGTTTTTTTGGGTGGCT--TATGGCATTAAGCTTTCTAATTCCATTGTGCTACGCAATTCCATAGGAGCAATTTCAC
AGCTCAAACATTTCTGTGCCACGAACTAGCAAGATTTCCAGTCAGCTGCTGAGCAGTCAAACAAGAATAGCTGCAGTTGC
AGGGAAGAAGAGA
>chr1D_928
AAGACCCCT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GGTTGAAGTTCTTTCCCTTCCCTA
GAAACGCGAAGAAACCCCAATCCCCCAAAGCCCCCAAAGCCCCCAACCATGGATTCCACTGCCGACTTCAAGGGCAAGCG
CCCTCTCTTCCAGCCTGATGACATGTCTGCCGCCGCCGCTGCAGTGGCGGTGCCGGATGAGGCGGAGGCGGAGGCGAAGC
CCTCGTCTTCTTCGGAGGAGGTAAAGGAGCCGGAGCCGGGGACAGAGAAGCAGGAGGAGAAACCCGCCCTGGTGCTGGTG
GCCGAGGACGGCGTGGAGGTGCGCATCTCGGAGCCCGCGGCGCGGATGTCGCAGATGCTCCGCCACATGATGGAGGACGG
CTGCGCTGACGGCCGCATCCCAACCGCCAACATCCACTCCGACATCCTCGAGATGGTCGTTGAGTACTGCGAGAAGCACG
GGCCGTACTACGACCCCGAGGCCTCTGAGCGCGACCGGTATCCCTTCCCGCCCTTCCCCATCGAGCTCACCCCTACCGTC
TCCTCCATCAAGCCCGTCACCTACGTCGACCCGGACCCCCACGGTCTCAAGGACTGGGACAGCGATTTCATCTCCCTCGA
TAACTCCACCCTCTTCGAGATCATCCTGGTAAAGCGACCAAGCCGATTGTTTACATTCTTTGCTCTATATTCTACCCCAA
GTAAGAAAACGCGACT------------------GTAGTATGTGTTGTGAATAGCAACGATGGTATATGTGCAAATAGAA
GGAAAGTTCGGCCGGTAACTGTGCGCACAATGTGGAATAGCTCATAGATTTTGATAACGATTGCAGACTCCAAACATGAC
TGCATAGATAAAATAGTTGAACAGAAAAATGGCCAGCAGCCATGATCATTTGGCAAATGCGCC-AATGTATTACTATGAT
TTTTCTTTTCACGAATATGCAAAAGACTTGTATATTACTCCCTCCGTATCAAAATATAAGACGTTTTCTGACACCAAAAA
ACGTCTTATATTTTGATACAGAGGGGGTATTTCATTAGTAGGGAGGTCATTACCAGACACATACATGTGCTCATACAATA
TGGC-CATACATGGGTGCTCAATGGAGCAGAACCGAAGGAGTGCAATTGATTAAGAATCTACGACCTATGTGCATTATGA
TGTGACGACCTATGTGCATTATGATGTGAGAATCAGAACTACAGGGAACATAATGTATGGAACATTTTGGCCATGATGCA
AATTATAGATGTGAAATGTTGGAAGGAGCGTCAATAATTGTCCAAAGAGTTTAA-GAATTTGACGAACTACAATAAAATT
GTATAGGAAGGAAGCAACATTTAATTGAATGGGGAGGAATTAAGAGAGATAGATAGAGGGAGCGGGCATAGGAAAGTC--
TGTGTCAGAGATTTGTTAGATCTAATGTGCACAGTGCAGTGATTTAATGTC-TTTTTGTGTGTG------GTGGTTAATT
GTAATGGTGGCAAAATAACTAGTGTGGTTTGTCTAGGTAAGATATATAGATTGGGGATAAATTTATTTTATTGGGGTTTG
TGCAGGCCGCAAACTACCTGAACATTGAGGATCTGCTAGACCTGGGCACCTCGGCTGTGGCTGACAAGATGAGGGGGAAA
AAGCCAGAGGAGATCCGCGAAATCTTTGAGATCGAGAACGACTACACACCAGAGCAGGAGGCTGAAGTCAGGAAGGAGAA
CGCATGGGCCTTTGAGGACTAAAAGATGACGGTTGATCTTGCTTCTGTCTATGCTGCTATTCTTGGTTTCATGTACAAGT
CCTTACCTCCAGTTCTGTTCCAAGTAGTCTGATAGATAGAT----AGATGAATGAGTCGGTGAAAACAGAAAACCGAGAT
GCACCATATGGGTTAGT--TAATCATCGTATACAGGAGAGTTTTGGTGTGAATTGTGGATGCGTGAATGGATGGTTTCGA
AATGGTTGAATCGGCAGAACCTTAATGGCAACCTGTGTTCAATTAAGTT-TACTATTCGCCAATTGCACA-TTTTTGCAG
TTAAGTTGTTGCTGGATCGTTTCTTGGATAACCTGTTTGGTTACATTTTATTGTTGGTGCTGCCATGCTTGGCCTTATCT
ACAAATTGCGAACCTGTGTGTTGTACACAATTAATTCTGTAGAGTAGGACACAGTTGTTTGGTCTGAGCAGAAATTATCA
CCTTGGGTTTATGGATAAGTTGGAGAAAACTGCAGACTAGGGTACAAATTAAGCTTGTAACA------------------
------------------------------------------------TATGCTGCATGTT--TTTGTGTAAATGTCCCC
AGTCTGTTGAGAAATGTTTGTGGCTTTTGAGCAAAGCTTTTTAACAGGGGAAAATGCAGTATTTACGAACTAGACTTGGT
GCTTGTATAGTGTTTAATTTAATATATAGTTTTAGCCATTTGAAACTTGGTAAACTATTCTATCT------AGTTTGTAT
TATCTTGTAGGCATGTATAGATTTTTCATATTAATATATAGTTATTGCCTGCGAAGGACATT------------------
---------------------CCTGTTC-AACTTGCAAGAGATGCATAGAAGATAAATCAGGCACTAACATCTTTCCATT
CTGATTTTTTTTTGGTGGTT--TATGGCATTGAGCTTTCTAATTCCATTGTGCTACGCAATTCCATAGGAGCAATTTCAC
AGCTCAAACATTTCTGTGCCACGAACTAGCAAGATTTCCAGTCAGCTGCTGAGCAGTCAAACAAGAATAGCTGCAGTTGC
AGGGGAGAAGAGA
>chr1B_928
AAGACCCCT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GGTTGAAGTTCTTTCCCTTCCCTA
GAAACGCGAAGAAACCCCAATCCCTCAAAGCCCCCAAAGCCCCCAACCATGGATTCCAGTGCCGACCTCAAGGGCAAGCG
CCCTCTCTTCCAGCCAGAAGACGTGCCTGCCGCCGCCGCCGCAGCGGCGGTGCCGGAT------GAGGCGGAGGCGAAGC
CCTCTTCTTCTTCGGAGGAGGTGAAGGAGCCGGAGCCGGGGGCAGAGAAGCAGGAGGAGAAACCCGCCCTGGTGCTGGTG
GCCGAGGACGGCGTGGAGGTGCGCATCTCGGAGCCCGCGGCGCGGATGTCGCAGATGCTCCGCCACATGATGGAGGACGG
CTGCGCTGACGGCCGCATCCCAACCGCCAACATCCACTCCGACATCCTCGAGATGGTCGTTGAGTACTGCGAGAAGCACG
GGCCGTACTACGACCCCGAGGCCTCTGAGCGCGACCGGTATCCCTTCCCGCCCTTCCCCGTCGAGCTCACCCCTACTGTC
TCCTCCATCAAGCCCGTCACCTACGTCGACCCGGACCCCCACGGTCTCAAGGACTGGGACAACGATTTCATCTCCCTCGA
CAACTCCACCCTCTTCGAGATCATCCTGGTAAAGCGACCAAGCCGATTGTTTACATTCTTTGCTCTATATTCTACCCCAA
GTAAGAAAACGCGATGAAGTCGATATCTTTATGAGTAGTATGTGTTGTGAATAGCAACGATGGTATATGTGCAAATAGAA
GGAAAGTTCTGTTGGTAACTCTGCGCACAATGTGGAATACA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ACCTATGTGCCTTATGATGTGAGAATCAGAACTACCGGGAACATAATGTATGGAACGTTTTGGCCATGATGCA
AATTATAGATGTAAAATGTTGGAAGGAGCGTCAATAGTTGTCCAAAGAGTTTAATGAATTTGACAAACTACGATTAAATT
GTATAGGAAGGAAGCAATATTTAATTGAACAGAGAGGAATTAAGGGAGATAGATAGAGGGAACGGGCATAGAAT-GTCTA
TGTGTCAGCGATTTGTTAGATCTAATGTGCACAGTGCAGTGATTTAATGGTTTTTTTGTGTGTG------GTGGTTAATT
GTAGTGGTGGCAAAATAACTAGTGTGGTTTGTCTATGTAAGATATATAGATTGGGGATAAATTTATTTTATTGGGGTTTG
TGCAGGCCGCAAACTACCTGAACATTGAGGATCTGCTGGACCTGGGCACCTCGACTGTGGCTGACAAGATGAGGGGGAAA
AAGCCAGAGGAGATCCGTGAAATCTTTGAGATCGAGAACGACTACACACCAGAGCAGGAGGCGGAAGTCAGGAAGGAGAA
CGCATGGGCCTTTGAGGACTAAAAGATGTCGGTTGATCTTGCTTTTGTCTATGCTGCTATTCTTGGTTTCAAGTACAAGT
CCTTACGTCCAGTTCTGTTCCAAGTAGTCTGGTAGATAAAT----AGATGGATGAGTCGGTGAAGACAGAAAACAGAGAA
GCACCGTATGAGTTAGTTATAATCATCGTATACAGGAGAGTTTTGGTGTGAATTGTGGATGCGTGGATGGATGGTTTCGA
AATGGTTGAATCGGTAGAACCTTAATAGCAACCTGTGTTCAATTAAGTTATACTATTCGCCAATTGCACATTTTTTGCAG
TTAAGTTGTTGCTGGATCGTATCTTGGATAACCTGTTTGGTTACATTTTATTGTTGGTGCTGCCACGCTTGGCCTTATCT
AGGAACTGGGAACCTGTATGTTGTACACAATTAATTCTGTAGAGTCGGACACAGTTGTTTGGTCTGAGCAGAAATTATCA
CCTTGAGTTTATGGATAAGTTGGAGAAAACTGCAGACTAGGGTACAAATTAAGCTTGTAATATACTCTCTCCGTTCCTAA
ATATAAGTTTTTTTTAGAGATTCCACTATGAACTACATACGGAGGATTTATGCTGCATGTT--TTTGTGTAAATGTCTCC
AGTCTGTTGAGAAATGTTTGTGGCTTTTGAGCAAAGCTTTTTAACTGGGGAAAATGCAGTATTTACGAAATAGACTTGGT
GCTTGTATAGTGTTTAATTTAATAAA-AGTTCTGGCCATTTGAAACTTGGTAAACTATTCTATCT------AGTTTGTAT
TATCTTGTGGGCATGTATAGATTTTTCATATTAATATATGGTTGTTGCCTGGGAAGGACATTTCCTGTTCAACTTGCAAG
AGATGCATCGAAGATAAATGTCCTGTTC-AACTTGCAAGAGGTGCATAGAAGATAAATCAGGTACTAACATCTTTCCATT
CTGAATTTTTTTTGGTGGCTTATATGGCATTAAGCTTTCTAATTCCATTGTGCTACGCAATTCCATAGGAGCAATTTCAC
AGCTCAAACATTTCTGTGCCACGAACTAGCAAGATTTCCCGTCAGCTGCTGAGCAGTCAAACAAGAATAGCTGCAGTTGC
AGGGAAGAAGA--
>SNPs
SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------
S----------------------------S--------------------------------------------------
---------S--------S-----------------------S-------------------------------------
-----------------------------S----------------------------S--S------S-----------
---------------------S--------------------------------------S-------------------
--------------------------------------------------------------------------------
------S---------------------------------S---------------------------------------
-----------------------------------------------------------------S--------------
---------------------------------------S----------------------------------------
---------S--------S----S--------------------------------------------------------
-----------------------------------------------------------S--------------------
-S----------------------------------S-S--------------------S-S-S----------------
-------------------------------S------------------------------------------S-----
--------------------S----S-----------S------------------------------------------
--S-S-----------------S------S-----S--------------------------------------------
--------------S-----------------------------------------------S-------S---------
-----------------------------S-------------------------S-----S------S-----------
----------------------S---------------------------------------------------------
--------S--------------S------------------S---------------------SSSSSS----------
------------------------------S------S------------------------------S-----------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
S---------------S------------S---------SS---------------------------------------
----------------------------S------------SSSS---------------------S-------S-----
--------------------------S--------S-------------------------S------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
---S----------------------------------------------------------------------------
------------S-------------------------------------------------------------------
----------------------------------------------------S--------SS-----------------
S----------------------S----------S-----S---------------------S---S-------------
-----------------------------------------------------------------SSSSSS---------
---------------------S-------------------S--------------------------------------
----------------------S-----S--------------------------S-----------S------------
---SS-------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>forward_71
---------------------------------------------------GTCCCCAAATTCGCCTCAGA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>reverse_2003
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ACGCATACATGGGTGCTCAA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>forward_306
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TCCTTGTGCTGGAACCAGTC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>reverse_2005
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GCATACATGGGTGCTCAACG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>forward_425
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TCAAGTGCGAGACGTCTACG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>reverse_2030
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAACCGGAGGAGTGCAATTG-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>forward_468
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGTGCTGAGCCACGATTTGA------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>reverse_2469
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GATTGGGGTTTG
TGCAGGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>forward_2023
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CGCATACATGGGTGCTCAAC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
>reverse_3482
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTGTTGCCTGCGAAGGACAT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------
