>input_sequence_47004
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-------------------------------------------CTATAAAAGAGAGGGCGTTGCACCCCCTAGAGCTGTA
GCCCGGAGGCCAGGGTGGGCTTAGTGCATGCATTGGCTAGCTGCTCCCTCCTCTCCCCTCCTCTCCTCTCCACCGTAGAT
AGAGCGCCGGCCGGCCTTTTCTTCGGTTCTTCATCACTGATATAGATAGCTTCCATCTTTTTGGTCCACTTCCCCTTCTT
GCATGTTCTTGATCCCTTCTCGATCTAAAACCCCCGATCGATCGATCGATCCTAGCTAGCATCCTTGTTGTTTTTCTTCC
CAAGGATCTACGAGTAGCTAGCTTCTTCTTGCAGATTTCATGCAAAACTAATA---CAAGTTCTTCCA---CTTCATTCC
CATCCTTCTTTATTTCTTGTTGCT----------------------------CTCTTAATTCTTCTCCTCCTACTCCTAT
CTAGTTTGACATGGAGAACGTTCTGCTGGATCGTTCTTCCGGAAGCTTCGAGTACCCGAAGAGGGGCGTCTATGGCGGGA
GGCCGGCGAGGCCGCACGGCGCGTACGGCTCCTCCCGCACGTGCCCGCAGTACCATCACTTCCAGAAAAGCGGCGCATGG
AACTCCGCCCCCGCCCCCGCTCTCCCGTATGCGTACGCCAGGCCGCCGATATACTCGTCGCCGTCTCTCCCTCTCCTGCC
GTCCAACCAGCCACCGCTCCTGCCGCTCCCGCCCACCGCCACCAAGTACGCCACTTTCCCCTACCCACCACCTCCGACAC
CGCCACGTGCCGTCAGGCCGGCACCGCCCACGACCGTCGCGCCGGCAGCGGCGCCCCCTGCGGCCTCACGCCAGCTGAGC
CAGAGAGACAGGAGGAGGAGGCCGGCCAAGCCGCCGACCGCAGAACCGGCAAGGGAGCAGAAGAAGAAGAAGCCGCTGGA
GCGGGCGGCGCCACTGCCGCCCGCGCCGGCGGTGACCGAGGCGCTGGACGACCTCGAGCAGGAGCTGGCCCGGAGCTGCG
TGCAGGACCTGCTGCACGCGCTGGCGCCGCCGCCCAGCAGCCTGCCGCTGCCCAGGTTCTCCCTCGTCGTCAAAGCGTCT
CCCCACTCCGCCACGGCCGGCAAGGTGGTGCCGCCTGCCCCGTCCTGCAACGCTGAGGCGGCCGCCGCCGACGGCCTCCG
CCGCCTCCTCCGCCTCTAGTATCGTGACAATCACCCCGCCGCGCCGCGTACGCACGTACGTGATCCCGGCGTGCCGTTGC
TACTGTTAATTATTTCCCTCCAATACTATTATTTCCTGGCTGGGAAAATACGTACCACTA---CTAGAAGACAAAGGAAG
AAGAGTTGTGTGATGCTGGAGCGATGGTCGGTGGCGT--------GACCGTGATGTGGCCGTCAGATCGATGGACGCG--
--GTGCGAGATGGGGTCCAGCCG-------TCGACCGATTCAGGTGAAGAAGATGATGTTGATTAAGCTTTAATTGTGTG
GTCCTACTAGATATATATCTAGGGTTTACGTACTGTACGTTACGTGCCTGCGTGCGCGCGTATGCTCTTGTTCTTGATGG
GGTG------TTTTTTGAATTACCTTGTATCAAGAGATTAATTACTCTAGTAAGTATAATGTATGTGGTAACTTAAAAAA
AGAGTATAATGTATGTGGTGATGTTTATGTGTTACTTAAA----------------------------------------
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>chr4A_1_TraesCS4A01G071700
TTCGGTCCTCGGCCAAAACAAATCGAACAAGGTAAACGCACACTATTTAATTAGTTACCGGCCGGCACTGCAT--AGTGA
GTGGCAGGATAAATTTTCTCCCATCTATC---TATGACGTTTTCAAATAATTGTGATCGGTTGGATAGAAAAAATTATGT
CAAGCGGCAAAATGAAACGGTTAGGGCTCATTCGGTCTACATCATTTC--------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AAATCACAGA
AATGGTGCAAGTA-------------------------------------------GCTTAACGCTAAGAAT--------
----------------------------------------------CCTGTCAAAACGAATGCTAGTAAACAT-------
-------GGATGAAAATGCCTTAGGAGCATTCCAAAAATCCTCCAATGTGAATGAGCCATTAAGAAGCAGCCAGTGACAT
AGCATAATTGAAAGGCATGATTTTTTTAGG-CCATATAACCGAAAGACATAATTTGGTAACATCGTAGTCGAAATCTAAT
GTCATGATGTATAGATACTTA-AATGTATTCCATGAAAATAATACATTTTCATGATCGCATTTTTACCCTCACTTGGCCA
AGGGACAAGTCTCAATCAAAAAACATCTTAAAACCCCAAGACACAGATAAATGAGTACAATGTGCATGTACTATAAGGCT
TGGTCAGCGGATTGCACTATGCTGTACTAATTTCAAAATC-TTTTATGAAAATCAAGGAATATGCTAG----AATAGTTG
GAACCACCTCCCATACCGAACGCAACCTAAAGCTAGAAATATATAAAGATGAGGTTCTTTTCCCC-GCAAAAATAAAAAA
AGACGAGGTTCTTTTGCCAAGAATA-AGACATCTATCCATGAATGCCATTCTCCGAATAATGCTCCGGGAGAGGCAAGGA
ATCAGTAATTACCATCCTCTAGAGGGGCATCAGCAAAAGTTTCTAACCCCCATGCCATAGTAAAATTAACACGTGCAAAC
CTGCCATTAGTAACACACAAG---------------AAAGTTCGAGGAAGA-TAGTTTATGTGAGGTCAAATCACCCCCC
ACAGTACTCAACCAACCAACCAGCCCATCTCATCAGCCTTGCTCTATAAAAGAGAGGGCGTTGCACCCCCTAGAGCTGTA
GCCCGGAGGCCAGGGTGGGCTTAGTGCATGCATTGGCTAGCTGCTCCCTCCTCTCCCCTCCTCTCCTCTCCACCGTAGAT
AGAGCGCCGGCCGGCCTTTTCTTCGGTTCTTCATCACTGATATAGATAGCTTCCATCTTTTTGGTCCACTTCCCCTTCTT
GCATGTTCTTGATCCCTTCTCGATCTAAAACCCCCGATCGATCGATCGATCCTAGCTAGCATCCTTGTTGTTTTTCTTCC
CAAGGATCTACGAGTAGCTAGCTTCTTCTTGCAGATTTCATGCAAAACTAATA---CAAGTTCTTCCA---CTTCATTCC
CATCCTTCTTTATTTCTTGTTGCT----------------------------CTCTTAATTCTTCTCCTCCTACTCCTAT
CTAGTTTGACATGGAGAACGTTCTGCTGGATCGTTCTTCCGGAAGCTTCGAGTACCCGAAGAGGGGCGTCTATGGCGGGA
GGCCGGCGAGGCCGCACGGCGCGTACGGCTCCTCCCGCACGTGCCCGCAGTACCATCACTTCCAGAAAAGCGGCGCATGG
AACTCCGCCCCCGCCCCCGCTCTCCCGTATGCGTACGCCAGGCCGCCGATATACTCGTCGCCGTCTCTCCCTCTCCTGCC
GTCCAACCAGCCACCGCTCCTGCCGCTCCCGCCCACCGCCACCAAGTACGCCACTTTCCCCTACCCACCACCTCCGACAC
CGCCACGTGCCGTCAGGCCGGCACCGCCCACGACCGTCGCGCCGGCAGCGGCGCCCCCTGCGGCCTCACGCCAGCTGAGC
CAGAGAGACAGGAGGAGGAGGCCGGCCAAGCCGCCGACCGCAGAACCGGCAAGGGAGCAGAAGAAGAAGAAGCCGCTGGA
GCGGGCGGCGCCACTGCCGCCCGCGCCGGCGGTGACCGAGGCGCTGGACGACCTCGAGCAGGAGCTGGCCCGGAGCTGCG
TGCAGGACCTGCTGCACGCGCTGGCGCCGCCGCCCAGCAGCCTGCCGCTGCCCAGGTTCTCCCTCGTCGTCAAAGCGTCT
CCCCACTCCGCCACGGCCGGCAAGGTGGTGCCGCCTGCCCCGTCCTGCAACGCTGAGGCGGCCGCCGCCGACGGCCTCCG
CCGCCTCCTCCGCCTCTAGTATCGTGACAATCACCCCGCCGCGCCGCGTACGCACGTACGTGATCCCGGCGTGCCGTTGC
TACTGTTAATTATTTCCCTCCAATACTATTATTTCCTGGCTGGGAAAATACGTACCACTA---CTAGAAGACAAAGGAAG
AAGAGTTGTGTGATGCTGGAGCGATGGTCGGTGGCGT--------GACCGTGATGTGGCCGTCAGATCGATGGACGCG--
--GTGCGAGATGGGGTCCAGCCG-------TCGACCGATTCAGGTGAAGAAGATGATGTTGATTAAGCTTTAATTGTGTG
GTCCTACTAGATATATATCTAGGGTTTACGTACTGTACGTTACGTGCCTGCGTGCGCGCGTATGCTCTTGTTCTTGATGG
GGTG------TTTTTTGAATTACCTTGTATCAAGAGATTAATTACTCTAGTAAGTATAATGTATGTGGTAACTTAAAAAA
AGAGTATAATGTATGTGGTGATGTTTATGTGTTACTTAAATTAAATCTCGTGCTTGGCGAGATATTGGCGCGTGTACACA
TTGTTTTTCTTGTGATCTTTGTGTGCATGTATGTATCCGGTGGACACTATTAGCTAGACATCAGTTATGAATGGACAGTT
TTATCTCTTTTTTTTTGCGGGGTTAAAAGGATTTCATTTTTCTTCCAAGTCCCTTTACCCCATCTCGATGTTTTAATTCT
GAAGACAAACAGTAGCATTTGAACTGAAATTTGGTAGTGGAAACTATATAGATGCACACATGTAAGCTCAATCTGAGTTG
TTTCATGTGATAAAAGAAATGCCCCTTGTTCCACTAACAAGATCAATGTCTCCAGGACATTTTTCTTTTCTTGAACAAGC
A--------------------TCCGTTTCTAAATGTAAGGTGTATTATTCTTTCAAAG-GTCAAACTTCTCTAACTTTGA
CCAAGTTTATAGAC------------------------------------------------------------------
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---------------------------------------------AAAAATATCAATGTCTAAAATACCAAATCATTATC
ACTAGATTCACGATGAAAATATATATTTTTATTTTATTTATTTAGTATGGTAGATCGTTATATATTTTGCTATAAACTTG
GTCAAACATAGACAATGTTTGACATTTTGAAAAACTAATACACCTTATATTTAGGAACAGAGCGAGTATATACAAACATG
CGCAGAAAAAAAAACATGCACACAAAAAAGAGGGAGTATATAAGAAGAAGGTCTTCTCATCGAAGAGGCATGCATACCTG
TGTTAGGGGCATTATGAATTTGCCTTGTGGATATAATTTTCTTTTGACAAAGTTTATAGGTTAAAAAACAATAGCAACTC
AATTCCAGTAGATGCATCATGAAATGCTGTTATACTACTATATTTATTTGGTATTATAGGCGTTGGTCTATTTTTCATAT
AAACTTGAATAAACTTTAAAAGATTGACTTAGAAAAAAACTAATATTCCTTGTGTTTGGGGAAGGAATGAATGGAGTACT
CCAAGGAGTAATTACCAGAGTCTGAGCACGGGCCTTCTCAGTTAAGACATTC
>chr4D_15
--------------AAAACAAATCGAACAAGGTAAACGCACACTATTTAATTAGCTACCGGCCGGCACTACATTAAGTGG
GTGGCGGGACATATTTTCTCCTATCTATCTAGTATGACGTTTCCAAATAATTGCGATCAGTTGGATAACG-AAACTATGT
CAAGTTGTAAAATGAAACAGTCAGGGCTCATTCGGTTTATGTCATTTCAAAGGTTTGCCCGACTCCGATGAGGAAAGTGC
CATGACAGCGGCGCACCTTCGGCTCGCTTCAGTGTTTGTAGTCATCGCTAGGTGGTCTACGGATCTAGATATATTTTTTA
CTTCTGATGTTCTTTGTACTACAATGACATGACAGTTGATGAATAGATCGAAAGTTTTCTTCGCAAAAAAAATTCAAAGA
AATGGTTGCCTTGCTCACTTCAATCATGAAAATTTCCCACGATATCTC---------CTTAATGCTAAGAAT--------
----------------------------------------------TCTGTCAAAATGAATGC---TAAACAT-------
-------GGATGAAAATGCCATAGGAGTCTTCCAAAAATCCTCCAAAATGAATGAGCCATTAATACGTAGCTATTGACAT
AGCATAATTGGAAGGCGTGATTTTCTTGAGACCATATAACCGAAAGACATAATTTGGCAACGTCGTAATCAAAATCTAAC
GTTGTGATG--TAGATATTTAGAATGTATTCCATGAAAATAATACATTTTCATGATTGCATTTTTACCCTCAGTTGGCCA
AG-GACAAGTCTCAATCAAAAAACATCTTAAAACCCCAAGACATAGATAAATGAGTGCAATGTGCATGTACTATAAGGCT
CGGTCGGGGGATTGCACTATGTTGTACTTATTTCCCAATC-TTTTATGAAAATCAAGGAATATGCTAG----AATAGTTG
GAACCACC-CCAACACCGAACGCAACCTAAAGCTAGAAATATATAAAGATGTGGTTCTTTTCCCC-GCAAAAATAAAAA-
-GACGAGGTTCTTTTGCCAAGAATA-AAACATCTATCCATGAATTCTATTCTCCGAATAATGCTCCCGGAGAGGCAAGGA
ATCAGTAATTACCATCCTCTAGAGGGGCATCAGCAAAAGTTTCTAACCCCCGTACAATAGT--AATTAACACGTGCAAAC
CTGCCATTAGTAACCCACAAG---------------AAAAATCGAGGAAGATTAGTTTATGTGAGGTCAAATCACCCCCA
CAAGTACTCAACGAACCAACTAACCCATCTCATCAACCTTCCTCTATAAAAGAGAGGGCGTTGCACCCCCTAGAGCTGTA
GCCCGGAGGCCAGGGTGGGCTTAGTGCATGCATTGGCTAGCTGCTCCCTCCT-----CTCCTCTCCTCTCCACCGTAGAT
AGAGCGCAGGCC----TTTTCTTCGGTTCT---TCACTGATATAGATAGCTTCCATTTTTTTGGTTCACTTCCTCCTCTT
GCATGTTCTTGATCTCTTCTCGATCTAAAACCACCGATA----GATCGATCCTAGCTAGCATCCTTGTTGTTTTTCTTCC
CAAGGATCTAGCTAG----------TTCTTGCAGATTTCATGCAAAACTAATACTACAAGTTCTTCCAGTTCTTCATTCC
CATCCTTCTTTATTTCTTGTTGCT----------------------------CTCTTAATTCTTCTCCTCCTACTCCTAT
CTAGCCAGACATGGAGAACGTTCTGCTGGATCGTTCTTCCGGAAGCTTCGAGTACCCGAAGAGGGGCGTCTATGGCGGGA
GGCCGGCGAGGCCGCACGGCGCGTACGGCTCCTCCCGCACGTGCCCGCAGTACCATCACTTCCAGAAAAGTGGCGCGTGG
AACTCCGCCCCCGCTCCCGCTCTTCCGTATGCGTACGCCAGGCCGCCGATATACTCGTCGCCGTCTCTCCCTCTCCTGCC
GTCCAACCAGCCACCCCTCCTGCCGCTCCCGCCCACCGCTACCAAGTATGCCACTTTCCCCTACCCACCACCTCCGACAC
CGCCACGTGCCGTCAGGCCGGCGGCGCCCACGACCGTCGTGCCGGCAGCGTCGCCCCCTGCTTCGTCACGCCAGCTGAGC
CAGAGAGACAGGAGGAGGAGGCCGGCTAAGCCGCCGGCCGCAGAACCGGCAAGGGAGCAGAAGAAGAAGAAGCCGCTGGA
GCGGGCGACGCCACTGCCGCCGGCGCCCGCGGTGACCGAGGCGCTGGACGACCTCGAGCAGGAGCTGGCCCGGAGCTGCG
TCCAGGACCTGCTGCACGCGCTGGCGCCGCCGCCCAGCAGCCTGCCGCTGCCCAGGTTCTCCCTCGTCGTCAAAGCGTCT
CCACACTCCGCCACGGCCGGCAAGGTGGCGCCGGCCGCCCCGTCCTGCAACGCTGAGGCGGCCACCGCCGACGGCCTCCG
CCGCCTCCTCCGCCTCTAGTATCGTGGCAATTACCCTGCCGCGCCGCG--CATT--TACGTGATCTCGGTGTACCGTTGC
TACTGTTGATTATTTCCCTCCAATACTATTATTTCCTGGCTGGGAAAATACGTACTACTACTACTAGAAGACAA-GAAAG
AAGAGTTGTGTGATGCTCGAGCAATGGTCGGTGGCGT--------GACCGTGATGTGGCCGTCAGAT----GGACGCG--
--GTGCTAGATGGGGTCCAGCCG-------TCGACCGATTCAGGTGAAGAAGATGATGTTGATTAAGCTTTAATTGTGTG
GTG---CTAGATATATATCTAGGGTTTACATACTGTACGTTACGTGCCTGCGTGCGCGCGTATGCTCTTGTTCTTGATTG
GGTGATGTG-TTTTTTGAATTACCTTGTATCAAGAGATTAATTACTCTAGTA----------------------------
--AGTATAATGTATGTGGTGATGTTTAAGTGTGACTTAAATTAAATCTTGTGCTTGGCGAAATATTGGCGCGTGTACATA
TTGTTTTTCGTGTGATCTTTGTATGCATGTATGTATCCCGTGGACACTACTAGCTAGACATCAATTATGAATGGACAGTT
ATCTATCCAGC---------------------------TTTCTTCCAAGTCCCTTTACCCCATC--GATGTTTTAATTCT
GAAGACAAACAGTAGTATTTGAACTGAAATTCGGTAGTGGAAACTATATAGATGCACACATGGAAGCTCAATCTGAGTTG
TTTCATGTGATAAAAGAAATACCCCTTGTTCCACTTACAAGATCAATGTCTCCAGGACATTTTTCTTTTCTTGAACAAGC
GTCAAAATGCATGTGTCTCCCTCCGTTTCTAAATGTAAGGTGCATTATTCTTTCAAAAAGTCAAACTTCTCTAACTTTGA
CCAAGTATATAGGCAAAAATATCCCCTCCCGTGGACGCGTCGCGACGCTTTCTCCTGAGCTATGTGGATTCGCTGATCGG
CGTTCAGATCAACCCCAACACCGATCCTGTGAAGGGCAAGCAAGTAATTAATGCAAACCTCACCATGCAGCCATTAGCAG
ACCTGGCCAAACGGGCCGGCCCGGCACGGACGGCCCGGCATGTGCTAATCGTGCCTGGCCCGGCACGGCCCGCCATGGCA
CGTTTAATAGCCGGGCCGTGCCGTGCCGGCCCACGGGCGCTGCTCCTTGGCCCAGGCACGGCCTGATTAGTAAATGGGCC
GGCCCGATGGCCCGTTTAGCACGCTGGGCTGCACATTTTCAGCCTGTTTGGCTGGTTTTTAGGCCTATTGGGCTATATTT
TAGGTATGCATATATAAAAAATTCTAAAAAATTAAACGGGCCGTGCCGTGCCGGCCCGCGTGCCTGGCTCTAGACCCAGG
CACGGCCCAAGGCGTGCCGCGTGCCGGGCACGACCCGTTTAGCCCGTGCCGTGCCTAGCCATGGCGGGCCGTGCCGGCGT
GCTTGCGGGCTGGCCTGTTTGGCCTGGCCCGTTTGGCCAGCTATAGCCATTAGCACATGTGAAGAGGCCGGCTGCTACGG
CTAAATGGGAGGCACCGCCAGTAGGATGGACAAAACTGAATGTTGATGCCTCCTTCTGCGAGAGATTGGGCACGACAGGT
GCAGGGATGGTGCTCCGCGACCATCATGGCGATATAATTTTTCTGCCTGTCGCCAATTGCGCTCGTGCTCTGAGCCACTG
GAGGACGGAGCTTGCTGCTTGTGAAGAGGGGTTGTCGCTCGCCCTACAGTGGACGACACTCCCAGTACAAGTGGAGATGG
ACTGCTTGACAGCAGTGAATATGGTGAAGGCCCCGGAGCAAGACAGGTCCAAGTTCTGTATGCTCGTTCAGGAGATTAAA
AGACATGCAAATGATAGAAGAGTTATTCAGTTTGCCTTTGCTAGGCGTGAGCAAAATAGAGTTAGTGATTTTCTTCCTAC
TTTCGGTACAGTTCAGGAACGCACTGTTGTGTGGCTTAGGGACGGACCAGGTGATGTGCCGGCCCTGTCTAAGCAAGACC
TTGATGTTGGCTAAGTAATAGAAACTCTCGTTTACCCCGCAAAAAAAAAATATCAATGTCTAAAATACCAAATCATTATC
AATATATTCACGATGAAAATATATTTTTATATTTTATTTATTTAGTATGGTAGATCTTTATATATTTTGCTATAAACTTG
GTCAAACATAGACAATGTTTGACATTTTGAAAAACTAATACACCTTATATTTAGGAACAGAAGGAGTATATAAGAACATG
CACAGAAAAAAAAAACATG------AAAAGAGGGAGTATATAAGAAG---GTCTTCTCATCGAAGAGGCATGCATACCTG
TGTTAGGGGCATTATGAATTTGCCTTGTGAATATAATTTTCTTTTCACAAAGTTTATAGATTAAAAAACAATAGCAACTC
AATTCCAGTAGATGCATCATGAAATGCTTTTATACTACTATATTTATTTGGTATTATAGGCATTGGTCTATTTTTCATAT
AAACTTGATTAAACTTCAAAAAATTGACTTCGAAAAAAACTAATATTCCTTGTGTTTGGGGAAGGAATGAATGGAGTACT
CCAAGGAGTAATTACCAGAGTCTGAGCACGGGCCTTCTCAGTTTAGA-----
>chr4B_15
AAAAC---------------AATCGAACAAGGTAAACGCACACTATTTAATTAGTTACCGGCCGGCACTACATTAAGTGA
GTGGCAGGATAGATTTTCTCCTATCTATC---TATGACG-TTTCAAATAATTGCGATCAGTTGGATAACG-AAACTATGT
CAAGTGGTAAAATGAAACAGTTAGGGCTCATTCGGCTTACATCATTTTCAAATCAAAGGAATAGT---------------
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--------------------------------------------------------------------AAAAGTAAAGGA
TTAAGGTGCCTTGCTCACTCCAATCCTTACGAAATACGAATTTTCAATGAGATCTCGCTTGATGCTAAGAATCCTAAAGA
ATCAGGTCAAGTATGGACACGATGATAAGAATCTACTACCTCTGTTCCTGTGAAAATGAATGC---TAAACATAAGAGGG
AAAACGTGGATGAAAATGCGGTAGGAGTTTTCCAAAAATCCTCCAAAACGGATGAGCCATTAATGAG------------T
AGCATAATCGAAATGCATGGTATTCT-GAGACCATGTAACCGAAAGAAATAATTTGGCAACATCGTAATCCCAATCTAAT
ATGGCAATG--TAGATATTTA-AATGTATTCCCTGAAAATAAGATATTT-CCTCATCACATTTTTACTATCAGCCCGCCA
AGGAACATGTCTCAATCA-AAAACATCTTAAAATCCAAAGACATAAATAAATGAGTGCAGTGT-----------------
------GGGGATTGCACTATGTTGTACCTGTTTTATAATCTTTTTATGAAAATCAAGGAATAGGCTAGTTAGAACAGTTG
GAACCACC-CCAATACCAAACGCAACCTACAGCTAGG--TATATAAAGATGAGGTTCTTTTCCCCCGCAAAATTGAAAA-
-GACGAGTTTCTTTTGCCAAGAATATAAACATATATCCATGAATGCTATTCTCCGAATAATGCTCCCGGAGAGGCAAGGA
ATCGGTAATTACCATCCTCTAGAGGGGCATCAGCAAAAGTTTCTAACCCCCGTACGATAGT--AATCAACACGTGCAAAC
CTGCCATTAGCAACACATCTCATCAACACACAAGAAAAAATTCGAGGAAGA-TAGTTTATATGAGGTCAAATCACCCCCC
ATAGTACTCAACCAACCAAC---CCCATCTCATCAACCTTCCTCTATAAAAGAGAGGGCGTTGCACCCCTTAGAGCTGTA
GCCCGGAGGCCAGGGTGGGCTTAGTGCATGCATTGGCTAGCTGCTCCCTCCT-----CTCCTCTCCTCTCCACCGTAGAT
AGAGCGCCGGCC----TTTTCTTCGGTTCT---TCACTGATATAGATAGCTTCCATCTTTTTGGTTCACTTCCTCTTCTT
GCATGTTCTTGATCTCCTCTCGATCCAAAACCACCGATC----GATCGATCCTAGCTAGCATCCTTGTTGTTTTTCTTCC
CAAGGATCTAGCTAG----------TTCTTGCAGATTTCATGCAAAACTAATA---CAAGTTCTTCCA---CTTCATTCC
CATCCTTGTTTATTTCTCATCTCGTTGTTTAATCTCAACAAGAAACTTGTTGCTCTTGATTCTTCTCCTCCTACTCCTAT
CTAGTCAGATATGGAGAACGTTCTGCTGGATCGTTCGTCCGGAAGCTTCGAGTACCCCAAGAGGGGCGTCTATGGCGGTA
GGCCGGCGAGGCCGCACGGCGCGTACGGCTCCTCCCGCACGTGCCCGCAGTACCATCACTTCCAGAAAAGTGGCGCATGG
AACTCCGCCCCGGCTCCCGCTCTTCCATATGCATACCCGAGGCCGCCGATATACTCGTCGCCGTCTCTCCCTCTCCTGCC
GTCCAACCAGCCACCCCTCCTGCCGCTCCCACCCACCGCCACCAAGTACGCCACTTTCTCCTACCCACCACCTCCAACAC
CGCCGCGTGCCGTCAGGCCGGCGGCGCCAACGGCCGTCGCGCCGGCTGCGGCGTCG------------CGCCAGCTGAGC
CAGAGAGACAGGAGGAGGAGGCCGGTTAAGCCGCCGGCCGCAGAACCGGCAAGGGAGCAGAAAAAGAAGAAGCCGCTGGA
GCGGGCGACGCCACTGCCGCCGGCGCCCGCGGTGACCGAGGCGCTGGACGACCTCGAGCAGGAGCTGGCCCGGAGCTGCC
TCCAGGACCTGCTGCACGCGCTGGCACCGCCGCCCAGCAGCCTGCCGCTGCCCAGGTTCTCCCTCGTCGTCAAAGCGTCT
CCCCACTCCGCCACGGCCGGCAAGGTGGTGCCGGCTGCCCCGTCCTGCAACGCTGAGGCGGCCACCGCCGACGGCCTCCG
CCGCCTCCTCCGCCTCTAGTATCATGACAATTACCCTGCCGCACCGCG--CGCACGTACGTCATCTCGGTGTACCGTTGC
TACTGTTAATTATTTCCCTCCAATACTATTATTTCCTGGCTGGGAAAATACGTACTACTA---GTAGAAGACAAGGAAAG
AAGAGTTATGTGATGCTGGAGCGATGGTCGGTGGCGTGACCCGGTGACCGTGATGTGGGCGTTGAAT----GGACGCGGT
GCGTGCTAGATGGGGTCCAGCCATGAGCCATCGATCGATTCAGGTGAAGAAGATGATGTTGATTAAGCTTTAATTGTGTG
GTCCTACTAGATT----TCTAGGGTT---------TACGTTAAGTGCCTGCGTGCGCGCGTATGCTCTTCTTCTTGATTG
GGTGATGTGTTTTTTGGAATTACCTTGTATCAAGAGATTAATTAGTACTCCTA---------------------------
----TATAATGTATGTGGT-------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSS-------------------------------------------------------S----------
-----------S---------S-------------------------------S----S--------SSSS---S-----
----S--S----------S-----------------S-------------------------------------------
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------------------------------------------------------------------------S---S---
------SSSSS-S-------------------------------------------------S-----------------
--------------------------------------------------------S------SSS--------------
--------------------S------SS-----------------SS---------------S---S---S-S------
------------------------S--SS----------------------------S---------S--S---------
--SS-----SS------S------------------------------------------------------S-------
-------------------------------------------S------------S-----------------------
S----S-S-------------S------S------S--------------------------------------------
--------S--S-------------------------------------------------------------------S
S--------------------------S------------------S-------------------S-------------
---------------------------------------------------S-S-S-----SS-----------------
---------------------------------------S----------------------------------------
-S------------------S-S------------S----S---------------------------------------
----------------------------------------------------SSSSS-----------------------
------------SSSS--------------SSS--------------------------------S-------S------
--------------S-----------------S------SSSS-------------------------------------
----------SSSSSSSSSSSSSSS-------------------------------------------------------
--------------------------------------------------------------------------------
-----SS-------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------S--------S--------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------SS-------------------------------------SS-S---------------
--------------------------S---------S-------------------------------------------
-------S-------------S-----S----------------------------------------------------
-S------------------------------------------------------------------------------
---------------------------------S-----------------------------S----------------
-------------------------------S----S-----------SS---------------S---S--S-------
-------------------------------------------------------S------------------S-S---
-------------------------------------------------------------------SSSS---------
------S-------------------------------------------------------------------------
-----------------------------S------------------------------------------------S-
-----------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-------------------------S----S---------------S-----------S-----------------S-
---------S------------S---------------S----------S-------------S----------------
S-S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------SS--------------
---------------S---------------S------------------------------S-----------------
--------------------S--------------S--------------------------------------------
S-----------------------------------------S--------------S----------------------
------S-----S-------------------------------------------------------------------
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-S--S-------------------S---S---------------------------S-----------------------
-------------------------------------------------------------SS---------SS------
-S------------SSSSSSSSSSS----------------------SSS------------------------------
-----------------------------S---------------S-------------S--------------------
----------------------------S--------------------------------S------------------
--------S-------S----S--------S-------------------------------------------------
-------------------------------------------S---SSSSS
>forward_1321
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---------------------AGCCCATCTCATCAGCCTTG---------------------------------------
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>reverse_3009
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------------------------------------------------CGTGCTTGGCGAGATATTGG------------
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----------------------------------------------------
