>input_sequence_46989
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-------------------------AGAATCATCTAGTTATAACAGCGATTTGTGCCAAGAAGACGACCCTCGCGCCGAT
CGTAGGCGGCATACAATAAACAAATCGTGACCCTCGCGCCGATCGTAGGCGGCATACAATAAACAAATCGTGCGCCTGGC
AGGGTCGCTGTCGTCTGCTTAGCAGTCCTCTTTAATCGCCACCCAGGGATCATTTA--CTACTCTGAACACCGAAGGTAA
CGTGCGTTCCCGTTACAGTGGAAATTCGCGGCGACGCACAGGCTTGCGCAATGAGGCTGCTCACAAGGTGTTCGATGAAA
TGCCGCGCTGAGCTTAAGCCCGTGCTACACACGGATGCCGTACTCCGCGCGCTCTCGT---------------TGGGCGG
GGCTAGCACGGGCGTCGGTACCAGAGGGATCCACTTCGTGCCTGGTCCGGCCTCCGAGGAGGAGCAAGAGCGCGTCCCGC
CGTCCCGGGGGTGGTACCCGGCCGCCTACGCCAGACTGCTCCGTCTTGCGGGGTCGCTCCAAGGCGTCGACCTCGTAGAT
GGCGACCTGCGGGACGCCGCGACGGGATCCCTTGTCACCGATGTGCACGCCGTCGCCCGGGTGGAGCAGTTCGACGCCCT
CGCGGGTGAGTTCGCCGCGACCCGGCGTGGGCCGCCGCTCAAGACGACGGCGCTGAGCTCGCTCACGAAGGTCTGCGATG
TTCTCGGCGTGTCGGCGCAGCGGAGGAAGAACGTGCGGCTGACGGTCTGCCCGCAGGTGACGCAGCAGCTCGTCTGGCGC
GGCGCGCTGGAGGAGGTGCTCAGGGACCTTCGAGCAGACATGGGCGCGCTGGAACCCCCGTCCCCGGCGATTCGGATGGC
GGAACAGATCGCATCGGCCTGCGCCAGCTTCCTATCGGAGACCGCGGACGCGGCGACGTCCTCCTCGCCGTCCTGGATGC
GCCCAACGCCGTACAGGAGGCCGTCCCATGCGCCGCCGCCGGCAAAGACATGGCAAGAAGTGCTGGACATGTTCACGGAC
CTGGGGAAGAGCCTGGCAACCGACGAGCGGCTAGCCGGGCAGGCGCAGAAGGTGGAGGCCATGAAAGAGGGGCTGTACCA
GATACGCGACATCATTGTCGAGAGGGACATCGCCTTCAAAGAGGCGCGCCACCAGGACTGCCTGGTGCAGAGGAATCTGT
CCAAGAACCTGGGGCACTCGTCCCGGGGCCTCTACACGCTGCTGCTCTTCTACCTCTACGGCACTGTCCGGGACATCGAG
GTGCATATCGGCAAATGCCTGTCCGGCAAGGAAGGCAAGAATGTCACCATACACGCCGTGAAATTCCTCGTCGACGGCGA
TGAACTCACGGTCCGGAGCGGCATCAAGCAGCTGAGCCGCGCTCTCCATGTCTTCAGCTTTGTCTGGGAAGCGGCAAATA
CTGACACTGGGACTAACAACGATATCGTCGTCAAGAAAGGTGAGGGTGCCAAGGGAGTACTGAAGCTGCAAGGGCATCTG
TGGGGCCTTGGTGTCGAAGAGAAGACGGTGACATACAGAGGGGATGTTTTCAAAGTGCATCAGATAAAGCTGCCCTGATT
TTCTCCAAATTCGCAACACCTTATCTGTAAATCACCCGGCTTCTGAAGAT-AGAAGAAA---------------------
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>chr4B_1_TraesCS4B01G105000
TTTTCTTGGCATATTCTTTCGATTTAAGAAATCTATAACCTGTCCTGGTCAAACATCCTGGTGATAAGTCAGCAAGATTC
TTATTTTACTTACATTAAGATTCCTCCTATTCCTTATCAATGGGGCGGCATTAAGTGGTTACAATTCTCAAATTAGATAA
TATTATAGATGCAATCTGTGTGTG------TTCTTTCATATGATAAAGTTAGTGAAAAGTAGAATCAATAACTAAGC-TA
CAGTAGTGACCCATC----T---TTTTATTCCTCTTCCCAATGTGTCTTTTTAGTTGTA---GCTTTGCTTGGCTTGATA
TTTAATGGCCAGCAAGTGATCAA-TTTTTTCTCAAGCTTTTGACTCACGTAGTTTCATTATGAGGATTTAAACGGGGTTA
---------------------------TTTATAACAAGAACTTAACATACTACGACCTCTACTCTTT-------------
ATTATATGTTTGGTATGCTGCTACATAGTAAAGTTCTGGAGCATTCGTTATGCCTTGGTAGAGCATTGGTCCAGTGTTCA
GGGCATTATGTTGAGAGCCA-----CAAGGATTTTCGGCATCAACCAAGACCTAAGCATGAGACGCAACAGTGGATTCTA
TTTAAGAAAACAAGCAACGGTGGAACAATTAAGTCCAGATTTAATTGACTTTTAAATCTACCTGCATGCATTGCATGATT
TTCATTAATATTTTCTTTCTTTCCATGACGTGTGCTCTTGAAGTATAAATTAGTGAACTTCTAAAATCATGTTCTGTAGA
TGATGAATAAGTGTCGTCTATTCCATTATCCAGTTACAAAACTGAAGATGAATGATGCATTGCATATCGTCTTGATGAAT
ATAACATTTTTCCCTACTGCGTTTACTTGATTTCTGCGTCTAATCAAATAGTTGAAATTTGACTCTC--ATAAGAACTTC
GTTGAAATAAATTAACTGCTAATTGGGTCAATTTCCCACATGGTGAAACAAATATAGATTTTCTTACATTAGTTTATAAG
CAGAGATTTCCGTCGCAACGCGCGGAGAATCATCTAGTTATAACAGCGATTTGTGCCAAGAAGACGACCCTCGCGCCGAT
CGTAGGCGGCATACAATAAACAAATCGTGACCCTCGCGCCGATCGTAGGCGGCATACAATAAACAAATCGTGCGCCTGGC
AGGGTCGCTGTCGTCTGCTTAGCAGTCCTCTTTAATCGCCACCCAGGGATCATTTA--CTACTCTGAACACCGAAGGTAA
CGTGCGTTCCCGTTACAGTGGAAATTCGCGGCGACGCACAGGCTTGCGCAATGAGGCTGCTCACAAGGTGTTCGATGAAA
TGCCGCGCTGAGCTTAAGCCCGTGCTACACACGGATGCCGTACTCCGCGCGCTCTCGT---------------TGGGCGG
GGCTAGCACGGGCGTCGGTACCAGAGGGATCCACTTCGTGCCTGGTCCGGCCTCCGAGGAGGAGCAAGAGCGCGTCCCGC
CGTCCCGGGGGTGGTACCCGGCCGCCTACGCCAGACTGCTCCGTCTTGCGGGGTCGCTCCAAGGCGTCGACCTCGTAGAT
GGCGACCTGCGGGACGCCGCGACGGGATCCCTTGTCACCGATGTGCACGCCGTCGCCCGGGTGGAGCAGTTCGACGCCCT
CGCGGGTGAGTTCGCCGCGACCCGGCGTGGGCCGCCGCTCAAGACGACGGCGCTGAGCTCGCTCACGAAGGTCTGCGATG
TTCTCGGCGTGTCGGCGCAGCGGAGGAAGAACGTGCGGCTGACGGTCTGCCCGCAGGTGACGCAGCAGCTCGTCTGGCGC
GGCGCGCTGGAGGAGGTGCTCAGGGACCTTCGAGCAGACATGGGCGCGCTGGAACCCCCGTCCCCGGCGATTCGGATGGC
GGAACAGATCGCATCGGCCTGCGCCAGCTTCCTATCGGAGACCGCGGACGCGGCGACGTCCTCCTCGCCGTCCTGGATGC
GCCCAACGCCGTACAGGAGGCCGTCCCATGCGCCGCCGCCGGCAAAGACATGGCAAGAAGTGCTGGACATGTTCACGGAC
CTGGGGAAGAGCCTGGCAACCGACGAGCGGCTAGCCGGGCAGGCGCAGAAGGTGGAGGCCATGAAAGAGGGGCTGTACCA
GATACGCGACATCATTGTCGAGAGGGACATCGCCTTCAAAGAGGCGCGCCACCAGGACTGCCTGGTGCAGAGGAATCTGT
CCAAGAACCTGGGGCACTCGTCCCGGGGCCTCTACACGCTGCTGCTCTTCTACCTCTACGGCACTGTCCGGGACATCGAG
GTGCATATCGGCAAATGCCTGTCCGGCAAGGAAGGCAAGAATGTCACCATACACGCCGTGAAATTCCTCGTCGACGGCGA
TGAACTCACGGTCCGGAGCGGCATCAAGCAGCTGAGCCGCGCTCTCCATGTCTTCAGCTTTGTCTGGGAAGCGGCAAATA
CTGACACTGGGACTAACAACGATATCGTCGTCAAGAAAGGTGAGGGTGCCAAGGGAGTACTGAAGCTGCAAGGGCATCTG
TGGGGCCTTGGTGTCGAAGAGAAGACGGTGACATACAGAGGGGATGTTTTCAAAGTGCATCAGATAAAGCTGCCCTGATT
TTCTCCAAATTCGCAACACCTTATCTGTAAATCACCCGGCTTCTGAAGAT-AGAAGAAACATGTATTCATTCAAAACTGA
TCATACGAGGGACACAACAGATACAGGTACAGCCTGAAATGCCATTCTCTCTTTTTTTTAACAAAAATGCTATTGTTTTT
CACTACATCTCATTTCCTGAATTTGTACAAAGGACGAGGCAACTGTATCCTGAGGGGAGATACATACAG----GGCAAAA
CAGAAAGCAAAAAAGACACCTTTGTCCTCCTAAGTTCTA-----ACACCTTAACTTATGGAGTATACTTTCTTCCAGTAT
ACAAAACATATACGATTGGAATTTCTACAATCTTCTTGGAGAATCAAATGTTTGCGTTTTCTGGCGAGGGGTTTCAAGCC
ACGGGTCTGTGAGATAGTTGCTTGGCCGTGTAGGGTACAGCATATTGTTGATAGGGCTGTAGTTGGCTGCTCCAGCCGAA
TATGCTGGATGTGGAGGTGATGGCAAACAACTCCGGTTCGACTGCCTGTACTGCCGTAACGGGCTAGTGCATGGCGAGAC
GGGCAGGGACATGTTCATACGCACATTGGATGCGCTGCTGGACAAATCAGATTACCAGATTTTGTTAGACAATAGAAGAG
ACGTAATTTACCATATTTTTAGCAAAA-TTAGTGAACGAGAACATACATGGCAGAGGCCTTGCGAGTTGATATCGAAGGA
ATAGAAGATGCTGGCACCACTAAGTTTCTCAGCCTGAGATTAGTATCTCGTAGAGGTGATAAGCTTCTGTAGGATGACAA
CTCGATGCTTGTCTTTACCTGAAATTTGATCACAGTGGTTAGAAATTAAAGGACACCACACTCAATATTGAGGCCAACAA
ATATGAGAGATAATGTCATCCAGCCATAACTGGTCATCATACATAGCACAAGCATAGGCGGATTTCATAATATAGCCCAC
TGTTTGACAGTGCATAGTCATAGACTGTAGACGTACCGTGGCTTTGCTGCCATCAGTGGAAGTTGAGAACATATCCCTAG
TAATGCCAGAGCCAGACCTAGAGGACCTA
>chr3B_1
TTTTCTTGGCATATTCTTTCGATTTAAGAAATCTATAACCTGTCCTGGTCAAACATCCTGGTGATAAGTCAGCAAGATTC
TTATTTTACTTACATTAAGATTCCTCCTATTCCTTATCAATGGGGCGGCATTAAGTGGTTACAATTCTCAAATTAGATAA
TATTATAGATGCAATCTGTGTGTG------TTCTTTCATATGATAAAGTTAGTGAAAAGTAGAATCAATAACTAAAC-TA
CAGTAGTGGCCCATC----T---TTTTATTCCTCTTCCCAATGTGTCTTTTTAGTTGTA---GTTTTGCTTGGCTTGATA
TTTAATGGCCAGCAAGTGATCAA-TTTTTTCTCAAGCTTTTGACTCACGTAGTTTCATTATGAGGATTTAAACGGGGTTA
---------------------------TTTATAACAAGAACTTAACATACTGCGACCTCTACTCTTT-------------
ATTATATGTTTGGTATGCTGCTACATAGTAAAGTTCTGGAGCATTCGTTATGCCTTGGTAGAGCATTGGTCCAGTGTTCA
GGGCATTATGTTGAGAGCCA-----CAAGGATTTTCGGCATCAACCAAGACCTAAGCATGAGACGCAACAGTGGATTCTA
TTTAAGAAATCAAGCAACGGTGGAACAATTAAGTCCAGATTTAATTGACTTTTAAATCTACCTGCATGCATTGCATGATT
TTCATTAATATTTTCTTTCTTTCCATGATGTGTGCTCTTGAAGTATAAATTAATGAACTTCTAAAATCATGTTCTGTAGA
TGATGAATGAGTGTTGTCTATTCCATTATCCAGTTACAAAATTGAAGATGAATGATGCATTGCATATCGTCTTGATGAAT
ACAACATTTTTCCCTACTGCGTTTACTTGATTTCTGCGTCTAATCAGATAGTTAAAATTTGGCTCTC--ATAAGAACTTC
GTTGAAATAAATTAACTGCTAATTGGGTCAATTTTCCACATGGTGAAACAAATATAGATTTTCTTACATCAGTTTATAAG
CAGAGATTCCCGCTGCAACGCGCGGGGAATCATCTAGTTTTAA-------------------------------------
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>chr7D_1
TTTTCTTGGCATATTCTTTCGATGTAAGAAATCTATAACCTGTCCTGGACAAACATCCTGGTGATAAGTCAGCAAGATTC
TTATTTTATTTACATTAAGATTCCTCCTATTCCTTATCAATGGGGTGGCATTAAGTGTTTACATTTCTCAAATTAGATAA
TATTATAGATGCAATCTGTGTGTGTTCCATTTCTTTCGTATGATAAAGTTAGTGAAAAGTAGAATCAATAACTAAAC-TA
CAGTAGTGACCCATC----T---TTTTATTTCTC-TCCCAATGTGTCTTTTTAGTTGTA---GCTTTGTTTGGCTTGATA
TTTAATGGCCAGCATGTGATCAA-TTTTTTCTCAAGCTTTTGACTCATGTAGTTTCATTATGAGGATTTAAACGGGGTTA
---------------------------TTTATAACAAGAACTTAACATACTGTGACCTCTACTCTTTTTGTTTGATGTAG
ATTACATGTTTGGTATGCTGCTACACAGTAAAGTTCTGGAGCATTCGCTATGCCTTGGT--AGCATTGGTCCAGTGTTCA
GGGCATTATGTTGAGAGCCATGTGACAAGGATTTTCGGCATCAACCAAGACCTAAGCATGAGACGCAACAGTGGATTCTA
TTTAAGAAAACAAGCAACGGTGGAACAATTAAGTCCAGATTTAATTGACTTTTAAATCTACCTGCATGCATTGCATGACT
CTCATTAATATTTTCTTTCTTTCCATGACATGTGCTCTTGAAGTATAGATTAATGAACTTCTAAAATCATGTTCTCTAGA
TGATGAATGAGTGTTGTCTATTCCATTATCCAATTACAAAATTGAAGATGAATGATCCATTGCATATCGTCTTGATGAAT
ACAACC-TTTTCCCTACTGCGTTTACTTGATTTCTACGTCTAATCAGATAGTTAAAATTTAGCTCTC--AAAT--ACTTC
GTTGAAATAAATTAATTGCTAATTGGGTCAATTTTCCACATGGTGAAACAAATATAGGTTTTCTTACATCAGTTTATAAG
CAGAGATTCCCGCAGCAACGCGCGGGGAATCATCTAGTTA----------------------------------------
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>chr5A_1
TTTTCTTGGCATGTTCTTTCGATGTAAGAAATCTATAACCTGTCCTGGACAAACATCATGGTGATAAGTCAGCAAGATTC
TTATTTTACTTACATTAAGATTCCTCCTATTCCTTATCAATGGGATGGCATTAGGTGTTTACATTTCTCAAATTAGATAA
TATTATAGATGCAATCTGTGTGTGTTCCATTTCTTTTGTATGATAAAGTTAGTGAAAAGTAGAATCAATAACTAAAC-TA
CAATAGTGACCCATC----T---TTTTATTTCTCTTCCCAATGTGTCTTTTTAGTTGTA---GCTTTGTTTGGCTTGATA
TTTAATGGCCAGCATGTGATCAA-TTTTTTCTCAAGCTTTTGACTCATTTAGTTTCATTATGAGGATTTAAACAGGGTTA
---------------------------TTTATAACAAGAACTTAACATACTGTGACCTCTACTCTTTTTGTTTGATGTAG
ATTGTATGTTTGGTATGCTGCTACACAGTAAAGTTCTGGAGCATTCGCTATGCCTTGGT--AGCATTGGTCCAGTGTTCA
GGGCATTATGTTGAGAGCCATGTGACAAGGATTTTCGGCATCAACCAAGACCTAAGCATGAGACGCAACAGTGGATTATA
TTTAAGAAAACAAGCAACGGTGGAACAATTAAGTCCAGATTTAATCGACTTTTAAATCTACCTGCATGCATTGCATGACT
CTCATTAATATTTTCTTTCTTTCCATGACATGTGCTCTTGAAGTATAGATTAATGAACTTCTAAAATCATGTTCTGTAGA
TGATGAATGAGTGTCGTCTATTCCATTATCCAATTACAAAATTGAAGATGAATGATCCATTGCATATCGTCTTGATGAAT
ACAACA-TTTTCCCTACTGCGTTTACTTGATTTCTACGTCTAATCAGATAGTTAAAATTTAGCTCTCATAAAT--ACTTC
GTTGAAATAAATTAATTGCTAATTGGGTCAATTTTCCACATGGTGAAACAAATATAGGTTTTCTTACATCAGTTTATAAG
CAGAGATTCCCGCAGCAACACGCGGGGAATCATCTAGTTA----------------------------------------
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>chr7A_1
TTTTCTTGGCATATTCTTTCGATGTAAGAAATCTATAACCTATCCTGGACAAACATCCTGGTGATAAGTCAGCAAGATTC
TTATTTTACTTACATTAAGATTCCTCCTATTCCTTATCAATGGGGTGGCATTAAGTGTTTACATTTCTCAAATTAGATAA
TATTATAGATGCAATCTGTGTGTGTTCCATTTCTTTCGTATGATAAAGTTAGTGAAAAGTAGAATCAACAACTAAAC-TA
CAGTAGCGACCCATC----T---TTTTATTTCTCTTCCCAGTGTGTCTTTTTAGTTGTA---GCTTTGTTTGACTTGATA
TTTAATGGCCATCATGTGATCAA-TTTTTCCTC--GCTTTTGACTCATGTAGTTTCATTATGAGGATTTGAACAGGGTTA
---------------------------TTTATAACAAGAACTTAACATACAGTGACCTCTACTCTTTTTGTTTGATGTAG
ATTATATGTTTGGTATGCTGCTACACAGTAAAGTTCTGGAGCATTCGCTATGCCTTGGT--ATCATTGGTCCAGTGTTCA
GGGCATTATGTTGAGAGCCATGTGACAAGGATTTTCGGCATCAACCAAGACCTAAGCATGAGACGCTACAGTGGATTCTA
TTTAAGAAAACAAGCAACAGTGGAACAATTAAGTCCAGATTTAATTGACTTTTAAATCTACCTGCATGCATTGCATGACC
CTCATTAATATTTTCTTTCTTTCCATGGCATGCGCTCTTGAAGTATAAATTAATGAACTTCTAAAATCATGTTCTGTAGA
TGATAAATGAGCGTTGTATATTCCATTATCCAATTACAAAATTGAAGATGAATGATCCATTGCATATCGTCTTGATGAAT
ACAACA-TTTTCCCTACCGCGTTTACTTGATTTCTATGTCTAATCAGATAGTTAAAATTTAGCTCTCATAAGAACTTT--
GTTGAAATAAATTAATTGCTAATTGGGTCAATTTTCCACATGGTGAAACAAATATAGGTTTTCTTACATCAGTTTATAAG
CAGAGATTCCCGCAGCAATGCGCGGGGAATCATCTAGTT-----------------------------------------
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>chr3A_100
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-------------------ATCCCTTCTATTCCTTACCAAAGAGACGGCATTAAGAGTTTATATTTCTCAAGTTAGATAA
TATTGTAGATGCAATGTGTGTGTGTTCCTTTCCTTTCATATGATGAAGTCAGTGAAAAGTAGAACCAATAACTAACATTA
CAGTAGTGACCCATCTTACT---TTTTTTTCCTCTTCCCAATGTGTCTTTTTAGTTGTACTAGCTTTGTTTGGCTCGATA
TTTAATTTCCAACAAGTGATCAC-TTTTTTCTCAAGC-TTTTACTCATGTAGTTTCACTGTGAGGATTTAAACAGGTTTA
---------------------------TTTATAATAAGAACTTAACATACTCTGCCCTCTACTCTTTTTGTTTGATGTAG
ATTATGTGTTTGCTATGCTGCTACACAATGAAGTTCTGGAGCATTCGTTATGCCTTGGT--AGTATTGCTCCATTGTTCA
GGGCATTATGTTGAGAGCCATGTGACAATGATTTTTGGCATCAACCGAGACCTAGGCATGAGACACAACGGTGAATTCTA
TTTCAGAACACAAGCAACAGTGGAACAATTAAGTCGAGATTCGGTTAACTTTTAAATCTACCTGCATGCATTGCATCACA
CTCATTAATATTTTATTTCTTTCTGTGATGTGTGCTATTGA---------------------------------------
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>chr2D_103
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----------------------CCTCCTATTCCTTACCAAAGAGGCGGCATTAAGAGTTTATATTTCTCAAGTTAGATAA
TATTGTAGATGCAATCTGTGTGTGTTCCTTTCCTTTTATATGATAAAGTCAGTGAAAAGTAGAACTAATAACTAACATTA
CCGTAGTGACCCATC----TTACTTTTATTCCTCTTCCCAATGTGTCGTTTTAGTTGTACTAGCTTTGTTTGGCTCGATA
TTTAATTTCCAACAAGTGATCACTTTTTTTCTCAAGC-TTTTACTCATGTAGTTTCATTATGAGGATTTAAACAGGTTTA
T--------------------------TTTATAATAAGAACTTAACATACTCTGACCTCTACTCTTTATGTTTGATGTAG
ATTATATGTTTGCTCTGCTGCTACACAATGAAGTTCTGGAGCATTCGTTATGCCTTGGT--AGTATTGCTCCATTGTTCA
GGGCATTATGTTGAGAGCCATGTGACAAGTATTTTTGGCATCAACCGAGACTTAGGCATGAGATGCAACAGTGAATTCTA
TTTCAGAAAACAAGC-ACGGTGGAACAATTAAGTCGAGATTCGGTTGACTTTTAAATCTACCTGCATGCATTGCATGACA
CTCATTAATATTTTCTTTCTTTCTGTGATGTGTGCTCTTGA---------------------------------------
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>chr6B_103
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----------------------CCTCCTATTCCTTACTAAAGAGGCGGCATTAAGAGTTTATATTTCTCAAGTTAGATAA
TATTGTAGATGCAATTTGTGTGTGTTCATTTCCTTTCATATGATAAAGTCAGTGAAAAATA-AACCAATAAGTAACATTA
CAGTAGTGACCCATC----TTACTTTTATTCCTCTTCCCAATGTGTCTTTTTAGTTGTACTAGCTTTGTTTGGCTCGCTA
TTTAATTTCCAACAAGTGATCAC-TTTTTTCTCAAGC-TTTTACTTATGTAATTTCACTATGAGGATTTAAACAGGTTTA
TTTTGTAATAAGAACTTTTTTGTGGGGTTTATAATAAGAACTTAACATACTCTGACCTCTACTATTTTTGTTTGATGTAG
ATTATATGTTTGCTATGCTGCTACACAATGAAGTTCTGGAGCATTCATTATGCCTCGGT--AGTATTGCTCCATTGTTCA
CGGCATTATGTTGAGATCCATGTGACAAGGATTTTTGGCATCAACCGAGACCTAGGCATGAGACACAGCTGTGAATTCTA
TTTCAGAACACAAGCAACGGTGGAACAATTAAGTCGAGATTCGGTTGACTTTTAAATCTACCTGCATGCATTGCATCACA
CTTATTAATATTTTATTTCTTTCTGTGATGTGTGCTCTTGA---------------------------------------
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>chr4A_1084
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----------------------------GACCCTCGCGCTGATCGTA--CGGCATACAACAAACGAATCGTGCGGCTGGC
AGGGTCACTGATCTCGATTTGGGCCGGCT-----ATCGCCGCCCAGGGATCATTTATACTACTCAGAACACCGAAGGTAA
CGTGCGCTCCCGTTGCAGTGGAAATTCGCGGCGACGCACAGGCTTGCGCAATGAGGCTGCTCACAAGGTGTTCGACGAAA
TGCCGCGCTAAGCTTAAGCCCGTGCTACGCACGGATGCCGTACTCCGCGTGCTCTCGATGGGCGGGGCTAGCATGGGCGG
GGCTAGCATGGGCGTCGGTACCAGAGGGATCCACTTCGTGCCCGGTCCGGCCTCCGAGGAGGAGCAAGAGCGCGTCCCGC
CGTCCCGGGGCTGGTACCCGGCCGCCTACGCCAGGCTGCTCCGTCTCGCGGGGTCGCTCCAAGGCGTCGACCTCGTAGAT
GGCGACCTGCGGGACGCCGCGACGGGATCCCTTGTCACCGATGTGCACGCCCTCGCCCGGGTGGAGCACTTCGACGCCCT
CGCGGGTGAGTTCGGCGCGACCCGGCGCGGGCCGCCGCTCAAGACGACGGCGCTGAGCTCGCTCGCGAAGGTGTGCGACG
TTCTCGGCGTGTCGGCGCAGCGGAGGAAGAACGTGCGGCTGACGGTCTGCCCGCAGGTGACGCAGCACCACGTCTGGCGC
GGCGCGCTGGAGGAGGTGCTCAGGGACCTTCGAGCAGACATGGGCGCGCTGGAACCCCCGTCTCCGGCGATTCGGATGGC
GGAACAGATCGCATCGGCCTGCGCCAGCTTCCTGTCGGAGACCGCGGACGCGGCGACGTCCTCCTCGCCGTCCTGGATGC
GCCCAACGCCGTACAGGAGGCCGTCCCCTGCGCCGCCACCGGCAAAGGCATGGCAAGAAGTACTGGACATGTTCACGGAC
CTGGGGAAGAGCCTGGCAACCGACGAGCGGCTAGCCCGGCACGCGCAGAAGGTGGAGGCCATGAAGGAGGGGCTGTACCA
GATACGCGACATCATTGTCGAGAGGGACATCGCCTTCAAGGAGGCGCGCCACCAGGACTGCCTGGTGCAGAGGAATCTGT
CCAAGAACCTGGGGCACTCGTCCCGGGGCCTCTACACGCTGCTGCTCTTCTACCTCTACGGCACTGTCCGGGACATCGAG
GTGCATATCGGCAAGTGCCTGACCGGCAAGGAAGGCAAGAATGTCACCATACACGCCGTGAAATTCCTCGTCGACGGCGA
TGAACTCGCGGTCCAGAGCGGCATCAAGCAGCTGAGCCGCGCGCTCCGTGTCTTCAGCTTTGTCTGGGAAGCAGCAAATA
CTGACACTGGGACTATCAACGATATCGTCGTCAAGAAAGGTGAGGGTGCCAAGGGAGTATTGAAGCTGCAAGGGCATCTG
TGGGGCCTTGGTGTTGAGGAGAAGACGGTGACATACAGAGGGGATGTTTTCAAAGTGCATCAGATAAAGCTGCCCTGATT
TTCTCCAAATCCGCAACACCTTATCTGTAAATCACCGAGCTTCTGAAGATTAGTAGAAACCTGTATTCATTCAAAATTGA
TCATAC-------ACAACAGATACAGGTACAGCCTGAAATGCCATTCTCTCTTTTTCTGAACAAAAATGCTATTGTTTTT
CACTACATCTCAATTTCTGAATTTGTACAAAGGACGAGGCAACTGTATCCTGAGGGGAGATACATACAGAAAGGGCTAAA
CAGAAAGCAAAAAAGACACCTTTGTCCTCCTAAGTTCTACAGTAACACCTTAACTTATGGAGTATATATTCTTCCAGTAT
ACAAAACATGTATGATTGGAATTTCTACAATCTTCTTGGAGAATCAAATGTTTGCGTTTTCTGGCGAGGGGTTTCGAGCC
ACGGGTCTGTGAGATAGTTGCTTGGCCGCATAGGGTACAGCACATTGTTGATAGGGCTGTAGTTGGCTGCTCCAGCCGAA
TATGCTGGATGCGGAGGTGATGGCAAACAACTCCGGTTCGACTGCCTGTACTGCCGCAACGGGCTAGTGCATGGCGAGAC
GGGCAGGGACATGTTCATACGCACATTGGATGCGCTGCTGGACAAATCAGATTACCAGATTCTGTTAGACAATGGAAGAA
ACGCAATTTACCATATTTTTAGCAAAAATTAGTGAACGAGAACATACATGGCAGAGGCTCTGCGAGTTGATATTGAAGGA
ATAGAAGATGCTGGCACCACTAAGTTTCTCATCCTGAGATTAGTATCTCGTAGAGGTGATAAGCTTCTGTAGGATGACAG
CTCGATGCTTGTCTTTACCTGAAATTTAATCATAGTGGTTAGAAATTAAAGGACACCACACTCAATATTGAGGCTAACTA
ATATGAGAGATAATGTCATCCAGCCATAACTGGTTATCATACATAGCACAAGCACAGACGGATTTCATAATATAGACCAC
TATTTGACAGTGCATAGTCATAGACTGTAGACGTACCGTGGCTTTGCTGCCATCAGTGGAAGTTGAGAACATATCCCTAG
TAATGCCAGAGCCAGACCTAGAGGACCT-
>chr4D_1125
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---------------------------------------------------------------------GTGCGGCTGGC
AGGGTCACTGATCTCGATTTGGGCCGGCTATTTAATCGCCACCCAGGGATCATTTA--CTACTCAGAACACCAAACGTAA
CGTGTGTTCCCGTTACAGTGGAAATTCCAGGCGACGCACAGGCTTGCGCAATGACGCTGCTCACAAGGTGTTCGACGAAA
TGCCGCGCTAAGCTTAAGCCCGTGCTACACACGGATGCCGTACTCCGCGCGCTCTCGT---------------TGGGCGG
GACTGGCATGGGCGTCGGTACCAGAGGGGTCCACTTCGTGCCTGGTCCGGCCTCCGAGGAGGAGCAAGAGCGCGTCCCGC
CGTCCCGGGGCTGGTACCCGGCCGCCTACGCCAGGCTGCTCCGTCTCGCGGGGTCGCTCCAAGGCGTCGACCTCGTAGAT
GGCGACCTGCGGGACGCCGCGACAGGATCCCTTGTCACCGATGTGCACGCCCTCGCCCGGGTGGAGCACTTCGACGCCCT
CGCGGGTGAGTTCGCCGCGACCCGGCGCGGGCCGCCGCTCAAGACGACGGCGCTGAGCTCGCTCACGAAGGTCTGCGACG
TTCTCGGCGTGTCAGCGCAGCGGCGGAAGAACGTGCGGCTGACGGTCTGCCCGCAGGTGACGCAGCACCACGTCTGGCGC
GGCGCGCTGGAGGAGGTGCTCAGGGACCTTCGAGCAGACATGGGCGCGCTGGAGCCCCCGTCCCAGGCGATTCGGATGGC
CGAACAGATCGCATCGGCCTGCGCCAGCTTCCTGTCGGAGACCGCGGACGCGGCGACCTCCGCCTCGCCGTCCTGGATGC
GCCCAACGCCGTACAGGAGGCCGTCCCCTGCGCCGCCGCCGGCAAAGACATGGCAAGAAGTACTGGACATGTTCACGGAC
CTGGGGAAGAGCCTGGCAACCGACGAGCGGCTAGCCGGGCACGCGCAGAAGGTGGAGGCCATGAAGGAGGGGCTGTACCA
GATACGCGACATCATTGTCGAGAGGGACATCGCCTTCAAGGAGGCGCGCCACCAGGACTGCCTGGTGCAGAGGAATCTGT
CCAAGAACCTGGGGCACTCGTCCCGGGACCTCTACACGCTGCTGCTCTTCTACCTCTACGGCACTGTCCGGGACATCGAG
GTGCATATCGGCAAATGCCTGTCCGGCAAGGAAGGCAAGAATGTCACCATACACGCCGTGAAATTCCTCGTCGACGGCGA
TGAACTCGCGGTCCGGAGCGGCATCAAGCAGCTGAGCCGCGCTCTCCGTGTCTTCAGCTTTGTCTGGGAAGCAGCAAATA
CTGACACTGGGACTAGCAACGATATCGTCGTCAAGAAAGGTGAGGGTGCCAAGGGAGTACTGAAGCTGCAAGGGCATCTG
TGGGGCCTTGGTGTTGAGGAGAAGACGGTGACATACAGAGGGGATGTTTTCAAAGTGCATCAGATAAAGCTGCCCTGATT
TTCTCCAAATTCGTAACACCTTATCTGTAAATCACCGAGCTTCTGAAGATTAGTAGAAACCTGTATTCATTCAAAACTGA
TCATACGAGGGACACAGCAAATACAGGTACAGCCTGAAATGCCATTCTCTCTTTTTCTGAACAAAAATGCTATTGTTTTT
CACTACATCTCATTTTCTGAATTTGTACAAAGGACGAGGCAACTGTATCCTGAGGGGAGATACATACAGAAAGGGCTAAA
CAGAAAGCAAAAAGTACACCTTTGTCCTCCTAAGTTCTA-----ACACCTTAACTTATGGAGTATATATTCTTCCAGTAT
ACAAAACATGTATGATTGGAATTTTTACAATCTTCTTGGAGAATCAAATGTTTGTGTTTTCTGGCGAGGGGTTTCGAGCC
ACGGGTCTGTGAGATAGTTGCTTGGCCGCGTAGGGTACAGCACATTGTTGATAGGGCTGTAGTTGGCTGCTCCAGCCGAA
TATGCTGGATGCGGAGGTGATGGCAAACAACTCCGGTTCGACTGCCTGTACTGCCGTAACGGGCTAGTGCACGGCGAGAC
GGGCAGGGACATGTTCATACGCACATTGGATGCGCTGCTGGACAAATCAGATTACCAGATTCTGTTAGACAATGGAAGAG
ACGTAATTTACCATATTTTTAGCAAA-ATTAGTGAACGAGAACATACATGGCAGAGGCCCTGTGAGTTGATATCGAAGGA
ATAGAAGATGCTGGCACCACTAAGTTTCTCATCCTGAGATTAGTATCTCGTAGAGGTGATAAGCTTCTGTAGGATGACAA
CTCGATGCTTGTCTTTACCTGAAATTTGATCATAGTGGTTAGAAATTAAAGGACACCACACTCAATATTGAGGCTAACTA
ATATGAGAGATAATGTCATCCGGCCATAACTGGTTATCATACATAGCACAAGCACAGGCGGATTTCATAATATAGACCAC
TATTTGACAGTGCATAGTCATAGACTGTAGACGTACCGTGGCTTTGCTGCCATCAGTGGAAGTTGAGAACATATCCCTAG
TAATGCCAGAGCCAGACCTAGAGGACCT-
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------S--------------------------------S--------------------------------------
-S--------------------------------------------S------S-------S------------------
----------------------------------S----------------------------------S----------
--------S---SS-----------S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-------SS----------S----S---------S-----
------S---SSS--SSS--S-SSSSS--S----------------------------------S---------------
---------------------------------------------------------------------------S----
---------S----------------------------------------------------------------------
--------S-----------------------------------------------------------------------
----------S-----------------------S-----------S---------------------------------
---------------------------------------------------S----------------S-----------
---------------------------S--------------------------------------------------S-
-------------------------------------------------------------------S-S----------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
---------------------------S---------------------------------S------------------
-----------------------------------------S-----------------------S--------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S---------------------------------------S------------------------S-------
---------------S----------------------------------------------------------------
--------------S--S--------------------------------------------------------------
------------------------------------SS---------------S------S-------------------
--------------------------------------------------------S-S---------------------
---------------S------------------------------------------------------------S---
------------------------------------------------------------------SS------------
---------S--S--------------------------------------------------------------S----
----------------------------S-------------S-------------------------------------
-----------S--------------------------------------------------------------------
-------------------------------------------------------------S-----------S------
-----------------------------------------------------------S--------------------
-------------------------------S------------------------------------------------
--------------------------------S-----------------------------------------S---S-
----------------------------------S-------------------S--------------------S----
-S------------------------------------------------------------------------------
----------------------------S
>forward_882
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TGCATTGCATATCGTCTTGATGAAT
AT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2062
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GCTGGACATGTTCACGGAC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_1136
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CGAT
CGTAGGCGGCATACAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_3132
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TGGAGGTGATGGCAAACAACT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
