>input_sequence_46987
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---------------------------------------------------------------------------ATGCT
GGCCGTCGCGGCGGGGCAGGCGACGCTGGGGGAGCCGTCGTCGTCGGCGGCCGCCGCCGCCGCCGT---GCCCAAGCGCC
GGGATCCCACGCCGGATCATCCACCGTATTCATGGGTAATCACTTCTCCCCGGTCGATTAATCGCCTACCTATTCCTCCC
CGTTTATTTGGTCGATTTTCTCTCTATG----GGGAGAACAGTTGGATTTGCTCTTTAATCTCCACCCACCCACCCGAAT
CGAATTAGGAAATCACTAATTGAGCATCGCCAGCCACAGATGCTCCTCGTTGATTCGGAAAGAAAAATCGAG-CATCGCC
TCCGATGTGAGGAGAAATCGCTTGCTCTCAACCCAGATTAGCTCGCGCTTGGTTGTCAATGGCAATGGGGTTTGGATGGG
CTGCCGCCGCCGGTTTGACGTTTGCGTGCTCGTCTGGTTGCAGATGATCGAAGAGGCGATCCAGGCGCTGGGCGAGGACG
GCGGCTCGGCGGAGTCCGCCATCTCGGGCTTCATCCGCGGCAGGTACCCCGGCGTCCCCGCCGCGCACGACAGGTTCCTC
CGCTACTACCTCGCCAAGCACGTCGCCGAGGGCCTCTTCGTCTGCGCCGCGCCTGGGCGGTACTCTTGCTGCTCCGACGA
CGAGCCCCAGCCCGAGCTCGCACTCACCGATGTCCTGGCGGCGGCTGCTGCGCCGG---------------------CAC
AGCCCAAGCGCGCCCGCGGTCGGCCTAGGAAGGATAGCTCGCTGGTGGTGGTCAAGCGTGGGCGCGGTCGGCCTAGGAGG
GATGATTCGCAGGCCGCTGCGGTGGCGGTGAGTGCTGGGCCTCCGATGACA-----------------------------
----------------------GGGGCCAAGCGCGGCCGCGGTCGGCCTCGGAAGGATGGCTCGGCGCCCAAGCCGGCTT
CTGGCAAGAAGTTTGTGAGCGGGTCGCCATCCGCGATGCCCAAACGCCGTGGCCGGTCTCGCCTTCTGACGGATGTAGGG
GCGGCCGACGTCTCCGGCGAAGCGCTCGTCACGGACAAGAAAGACAGCACTGAGGCTCCATCCGCCACTGATAAGAACCA
TGGGGAACCTCGCGAGCTGGCACTTGCGATCGTCAACGACGGCTCTGGTGCAGCATTACTTACGGAGGAAGATGGCGGCG
AGGCTCCAGCAGCCAAGCGGCCGCTCTTGGCCAAGGAACCTGCCGCATTCAGTACGCCAGAGTGCAGCACCCAGCCCTGC
AAACTGCCCCTTGTGGCGGCTGACGAAAACTCTGCTCGGGCCCTAGCCTCCGACAAGGAGGGTGACACCGAAGCTCCATT
TGTGAAGCACAAGCGCCGTCGTCGGACCTGCAGATCAGAGCCGGCAAAATCCACCTGCGGCTCTCCCTCAACATCAATTG
CAGACAAGAAGGCCGGTGGCAACGTTGCATCTGCTCCACCCAAGGGCCGTGGCTGGTTGCGCAAACCGACATTGATGGCT
GCCGCCGCCGACGAAATTACACCCAATGAGGCTCGATCATTACCGGGCAAGCCGCGCCGCAAACCTCGCAAACAGTTTCT
GCTGAACTTTTATGATGAGGTACCAAATAGTCCAAAGTTCTGTGTCCTCGCACTGCCTGCCCAGGTGCCAGGGGCAACAA
AGGCGCCGTAG---------------------------------------------------------------------
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>chr2D_1_TraesCS2D01G388900
TACATTTGAAAAAATGTAGCATTTCAATAATGTTTACAAGTTTCAAAAA-ATGTGTTTGTGAGCTTTTCAAACAAAACTG
TGTGTACAATGTAAATAAAAAGTTTGCGTGTTGTAAAAAATTGTGTCTTACACTTAACAGAATATACTTGGGTTGTGTTT
GAAAAAAGTGCCTACGAATTTGAAAATGTTGAACCATGAAAAAGAGTGTTTGTTTAGTTTTATAATACGTTTATTATCAT
TAAGAAAATGTAAACATGTACTTAAATAATAA--------ATATGTATA-------AAAAA-TTTGAAAACATTTAATTT
AAAAATGTACATGATGTATTTTAAAATATCAAAAGTTTATCAAAAAATATTTTATGTGTGCGTTAAAAATGTATATTGGG
TACAAAGAAAAAATAGACATGTGTAAAAA-GAAAAAAGATAACAAAACAAAAAGGCAAAAACAAAGAAAACCAGGAGCAG
TGGGCGCGCGCGAGCGACGCTGCTAATGGGCCGGCCCAGTTCAGCAAATACCGGCTAAATCCTCTCAAGGTTTAAAATAG
ACCGGGATAACATAGTTTGGTGTGCTGATTTCAAGGATTGAGAGTTCAGGGTTTGATTTAGCTTTCGCCGACAAATTCTA
GGTTTGTTTTGGACTTTTTCCTTCCCAAACCCAAACAATGTCCTTGCTCAACAATGCCAAACGTTTTGATGATTTTTATT
GTACTCTGTTGAATGGAA--GAGCCCATGGCGATTCGATCTCGAGCGTTC------GAAATATCTCCACCCAACATCGGA
GACGACGAC---AGAAGAGGCGAATCACTTACAGCAAAGGGCAATATGGTCCGAG-ACGGTCGGGCTTTCCTTTCCCCGG
AGCCCAGAAGCACCAGACGCGTTCCTCCGCTTCCTTC-CTTCTCCCCCTCCTTAAACCTGCCTCTCGTCTCTTCTAGATT
TGCGCCCTCCCCTTTCCGCCCCTGGTCTCCTCCCCCTCC----CTCCCACCGATCCGCCCGCCCCCCGCCGCGCAATGCT
GGCCGTCGCGGCGGGGCAGGCGACGCTGGGGGAGCCGTCGTCGTCGGCGGCCGCCGCCGCCGCCGT---GCCCAAGCGCC
GGGATCCCACGCCGGATCATCCACCGTATTCATGGGTAATCACTTCTCCCCGGTCGATTAATCGCCTACCTATTCCTCCC
CGTTTATTTGGTCGATTTTCTCTCTATG----GGGAGAACAGTTGGATTTGCTCTTTAATCTCCACCCACCCACCCGAAT
CGAATTAGGAAATCACTAATTGAGCATCGCCAGCCACAGATGCTCCTCGTTGATTCGGAAAGAAAAATCGAG-CATCGCC
TCCGATGTGAGGAGAAATCGCTTGCTCTCAACCCAGATTAGCTCGCGCTTGGTTGTCAATGGCAATGGGGTTTGGATGGG
CTGCCGCCGCCGGTTTGACGTTTGCGTGCTCGTCTGGTTGCAGATGATCGAAGAGGCGATCCAGGCGCTGGGCGAGGACG
GCGGCTCGGCGGAGTCCGCCATCTCGGGCTTCATCCGCGGCAGGTACCCCGGCGTCCCCGCCGCGCACGACAGGTTCCTC
CGCTACTACCTCGCCAAGCACGTCGCCGAGGGCCTCTTCGTCTGCGCCGCGCCTGGGCGGTACTCTTGCTGCTCCGACGA
CGAGCCCCAGCCCGAGCTCGCACTCACCGATGTCCTGGCGGCGGCTGCTGCGCCGG---------------------CAC
AGCCCAAGCGCGCCCGCGGTCGGCCTAGGAAGGATAGCTCGCTGGTGGTGGTCAAGCGTGGGCGCGGTCGGCCTAGGAGG
GATGATTCGCAGGCCGCTGCGGTGGCGGTGAGTGCTGGGCCTCCGATGACA-----------------------------
----------------------GGGGCCAAGCGCGGCCGCGGTCGGCCTCGGAAGGATGGCTCGGCGCCCAAGCCGGCTT
CTGGCAAGAAGTTTGTGAGCGGGTCGCCATCCGCGATGCCCAAACGCCGTGGCCGGTCTCGCCTTCTGACGGATGTAGGG
GCGGCCGACGTCTCCGGCGAAGCGCTCGTCACGGACAAGAAAGACAGCACTGAGGCTCCATCCGCCACTGATAAGAACCA
TGGGGAACCTCGCGAGCTGGCACTTGCGATCGTCAACGACGGCTCTGGTGCAGCATTACTTACGGAGGAAGATGGCGGCG
AGGCTCCAGCAGCCAAGCGGCCGCTCTTGGCCAAGGAACCTGCCGCATTCAGTACGCCAGAGTGCAGCACCCAGCCCTGC
AAACTGCCCCTTGTGGCGGCTGACGAAAACTCTGCTCGGGCCCTAGCCTCCGACAAGGAGGGTGACACCGAAGCTCCATT
TGTGAAGCACAAGCGCCGTCGTCGGACCTGCAGATCAGAGCCGGCAAAATCCACCTGCGGCTCTCCCTCAACATCAATTG
CAGACAAGAAGGCCGGTGGCAACGTTGCATCTGCTCCACCCAAGGGCCGTGGCTGGTTGCGCAAACCGACATTGATGGCT
GCCGCCGCCGACGAAATTACACCCAATGAGGCTCGATCATTACCGGGCAAGCCGCGCCGCAAACCTCGCAAACAGTTTCT
GCTGAACTTTTATGATGAGGTACCAAATAGTCCAAAGTTCTGTGTCCTCGCACTGCCTGCCCAGGTGCCAGGGGCAACAA
AGGCGCCGTAGTTCTGAAGCATGGCAGCTCATGGAACATCGTCACATAGTTGAAAGAACACCTCTTGAGTTCCTAAATGC
AGTGCACAGGACGATAGCTTTTGTGTTCTATCCATCATCGGTAGTTTTAGGTTTT--TTGTTGTTGTTGTTGAACTTCAG
CAGTTTTAGGGGTTGATTGAACTAGGTAGGGATATTTCTTTTCGGAGCTCCAGTTTAGTTCAAGTCTGAACAAATACCAC
CATCCGTCCAACAAGGCCCTGAGGGTTTGCCTTCAGACTGAATTTGTATGAATCTCGTCAGTTCATGCGAAAAGAAAAAC
AGATGCAATTGTTCTGGTTCTTTGA-------------------------------------------------------
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---------------------------------------------------------------------TATTTGTCTGC
CATAAGTTGCTGAAACTCTCGATTACATGAATCTTGGAGAAGTAATCTCTTACATTTGGGGCCATCAAATCTCAGACCAG
AAATGTTGAAACCAATGAGGCCAAAATAACCTTTTTGATATTAAAATCCAGAAATTTTTGGTAAACATTCAACAACTCTG
AAGGTTTACAATCACACAGAACTAGTAGATCACCATAGTTGGCAACCCAGGGCAGATAATTAGCTAACAGAAAGAACAAC
CCAGGGCAGATAATTAGCTAACAGAAAGAACATCCCAGGGCAGATAATTAGCTAACAGAAAGAACAAACCCATCATCTCT
GTCATGTACACTGAAAATTATTTCAATTGGACTCCTGGCATGCCGGCAACTTATGATGAATTTACCAAATCAATGATGGT
GGATATAAGAACTGTCATCCACCACGGTGTCGGGCATGGATTATTCGATAAGGAATCTGGAATTCCTCATGCCTCCCAGC
CCCTCAAGATGGTGGCGCGAGCAACCCGGTTCACTCCCAAGGTGAATGCTCCCATCCTAAGGTTGCAATCTTGAGACTTG
CACATGGCCTTGATGTTCTGGAACGCGCTGTTCATGTACTTATGGAGCTCCATGTTCACCTTTTCTTCTTCCCACATGAA
TCCTTGAATGTTCTGCG
>chr6D_1
TACATTCGAAAAAATGTAGCATTTCAATAATGTTTACAAGTTTCAAAAA-ATGTGTTTGTGAGATTTTCAAACAAAACTG
CGTGTACAATGTAAATAAAAAGTTTGCGTGTTGTAAAAAATTGTGTCTTACACTTAACAGAATATACTTGGGTTGTGTTT
GAAAAAAGTGTCTACAAATTTGAAAATGTTGAACCATGAAAAAGAGTGTTTGTTTAGTTTTATAATACGTTTATTATCAT
TAAGAAAATGTAAACATGTACTTAAATAATAA--------ATATGTGTA-------AAAAA-TTTGAAAAAATTTAATTT
AAAAATGTACATGATGTATTTTAAAATCTCAAAAGTTTATCAAAAAATATTTTATGTGTGCGTTAAAAATGTATATTGGG
TACGAAGAAAAAACAGACATGTGTAAAAATGAGAAAAGATAACAAAACAAAAAGGCAAAAACAAAGAGAACCAGGAGCAC
TGGGCGCGCGCCAGCGACGCTGCTAATGGGCCGGCCCAGTTCAGCAAATACCGGCTAAATCCTCTCAATGTTTAAAATAG
ACCGGGATAACAGAGTTTGGTGTGCTGATTTCAAGGATTGAGAGTTCAGGGTTTGATTTAGCTTTCGCCGACAAATTCAA
GGTTTGTTTTGGACTTTCTCC-----------------------------------------------------------
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-----------------
>chr6D_1
TACATTCGAAAAAATGTAGCATTTCAATAATGTTTACAAGTTTCAAAAA-ATGTGTTTGTGAGATTTTCAAACAAAACTG
TGTGTACAATGTAAACAAAAAGTTTGCGTGTTGTAGAAAATTGTGTCTTACACTTAACAGAATATACTTGGGTTGTGTTT
GAAAAAAGTGTCTACAAATTTGAAAATGTTGAACTATGCAAAAGAGTGTTTGTTTAGTTTTATAATATGTTTATTATCAT
TAAGAAAATGTAAACATGTACTTAAATAATAA--------CTATGTATT-------AAAAA-AATGAAAAAAATTAATTT
AAAAATGTACATGATGTATTTTAAAATATCAAAAGTTTATCAAAAAATATTTTATGTGTGCGTTAAAAATGCATATTGGG
TACGAAGAAAAAATAGACATGTGTAAAACAGAAAAAGATAACAAAACAAAAAAGGCAAAAACAAAGAAAACCAGGAGCAG
TGGGCACGCGCGAGCGACGCTGCTAATGGGCCGGCCCAATTCAGCAAATACCGCCTAAATCCTCTCAAGGTTT-AAATAG
ACCGGGATAACAGAGTTTGGTGTGCTGATTTTAGGGATTGAGAGTTTAGGGTTTGATTTAGCTTTGGCCGACAAATTCAA
GGTTTGTTTTGGACTTTTTCCT----------------------------------------------------------
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-----------------
>chr3A_1
TACATTCGAAAAAAATTAGCATTTCAATAATGTTTACAAGTTTCAAAAA-ATGTGTTTGTGAGATTTTCAAACAAAACTG
TGTGTACAATGTAAATAAAAAGTTTGCATGTTGTAAAAAATTGTGTCTTACACTTAACAGAATATACTTGGGTTGTGTTT
GAAAAAAGTGTCTACAAATATGAAAATGTTGAACCATGCAAAAGAGTGTTTGTTTAGTTTTATAATACGTTTATTATCAT
TAAGAAAATGTAAACATGTACTTAAATAATAA--------ATATGTATT-------AAATTTTTTGAAAACATTTAATTT
AAAAATGTACATGATGTATTTTAAAATATCAAAAGTTTATCAAAAAATATTTTATGTGTGCGTTAATAATGTATATTGGG
TACGAAGAAAAAATAGACATGTGTAAAAAAGAAAAAACATAACAAAACAAAAAGGCAAAAACAAAGAAGACCAGGAGCAG
TGGGCGCGCGCGAGCGACGCTGCTAATGGGCCGGCCCAGTTCAGCAAATACCGGCTAAATCCTCTCAAGGTTTAAAATAG
ACCGGGATAACAGAGTTTGGTGTGCTGATTTCAAGGATTGAGAGTTCAGGGTTTGATTTAACTTTCACCGACAAATTCAA
GGTTTGTTTTGGACTTTTT-------------------------------------------------------------
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-----------------
>chr1B_1
TACAATCGAAAAAATGTAGCATTTCAATAATGTTCATGAGTTTCAAAAA-ATGTGTTTGTGACATTTTCAAACAAAAATG
TGTGTACAATGTAAAGAAAAAGTGTGCGTGTTGTAAAAAATTGTGTCTTACATTTAACAAAATATACTTGGCATGTTTTT
GAAAACAGTGTCTACATATTTAAAAATGTTGAACCATGCAGAAGAGTGTTCGTTTGGTTTTATAAAATGTTTATTGTCAT
TGAGAAAATGTAAACATGCATTTGG--AAAAAATATAACCATGTATTCA-------AAAAA-ATGAAAAAAAAATAATTT
AAAAATGTACATAATGTATATGGAAGTATCAAAAGTTTATC-AAAAATATCTTATGTGTGCGTTAAAAATGTACATTGGA
TAAGAAGAAAAAATAGACATGAGTAAAAAAGAGAAAAGAAAAAAAACAAAAAAAAGGAAAA-----AAAAACCAGAGCAG
TGCGTGCACCCGAGCGACGACGTTAATGGGCTGGCCTAATTCAGCAAATACCGGCTAAGTCCGCTCAAGGTTTAAAATAG
ACCGGGACAAGGGAGTTTGGTGTGCTGATTTCAGGGATTGAGAGTTCAGGGTTTGATTTAGCTTTCGCCGACAAATTCAA
GGTTTGTTTTGGACTTTTTCC-----------------------------------------------------------
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-----------------
>chr1B_1
TACAATTGAAAAAATGTAGCATTTCAATAATGTTCATGAGTTTCAAAAA-ATGTGTTTGTGACATTTTCAAACAAAAATG
TGTGTACAATGTAAAGAAAAAGTGTGTGTGTTGTAAAAATTTGTGTCTTACATTTAAAAGAATATACTTGGCATGTTTTT
GAAAACAGTGTCTACATATTTAAAAATGGTGAACCATGCAGAAGAGTGTTCGTTTGGTTCTATAAAATGTTTATTGTCAT
TGAGAAAATGTAAACATGCATTTGG--AAAAA--------ATATAACCATGTATTCACAAA-AATGAAAAAATTTAATTT
AAAAATGTACATAATGTATATGGAAGTATCAAAAGTTTATCAAAAAATATTTTATGTGTGCGTTAAAAATGTACATTGGA
TAAGAAGAAAAAATAGACATGAGTAAAAAAGAGAAAAGAAAAAAAATAGAAAAAGGAAAAAAA---------CAGAGCAG
TGCGCGCACGCGAGCGACGACGTTAATGGGCTGGCCTAATTCAGCAAATACCGGCTAAGTCCACTCAAGGTTTAAAATAG
ACCGGGATAAGGGAGTTTGGTGTGCTGATTTCAGGGATTGAGAGTTCAGGGTTTGATTTAGCTTTAGCTGACAAATTCAA
GGTTTGTTTTGGACTTTTT-------------------------------------------------------------
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-----------------
>chr5B_1
TACATTC-AAAAAATGTAGCATTTCGATAATGTTCATGAGTTTCAAAAAGATGTGTTGGTGACGTTTTCAAACAAAAATG
TGTGTATAATGTAAAAAAATTGTTTGCGTGTTGTT-AAAATTGTGTCTTACACTTAATAGAATATACTTAGCATGTGTTT
GAAAAAAGTGTCTACAAATTCAAAAATGTTGAACTATGAGAAAGAATGTCCGTTTAGTTTTAGAAAATGTTTATTGTCAC
TAA-AAAATGTAAACATGTATTTGGAAAAA-----------TATAACCATGTATTCAAAAA-ATTGAAAACATTTAATTT
AGAAATGTACATAATGTGTTTGAAACTATCAAAAGTTTGTCAAAAAATATTTTATGTGTGCGTTAAAAGTGAACATTGGG
TACGAAGAAAAAATAGACATGTGTAAAAAAGAAAAAAGAAAACAAAAAC---------AAAAAAAGAAAACCCAGAGAAA
TGCGCGCGCGGGAGCGACGCCGTTAATGGGCCGGCCCAATTCAGCAAATACCGGTTAAGTCCTCACAAGGTTTAAAATAG
ATCGGGGTAAGAGAGTTTGGTGTGCTGATTTCAGGGATTGAGAGTTCAGGGTTTGATTTAGCTTTTGCCGACAAATTCAA
GGTTTGTTTTGGAATTTTTCC-----------------------------------------------------------
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-----------------
>chr1D_4
---ATTCGAAAAAATGTAGCATTTTAATAATGTTTACAAGTTTCAAAAA-ATGTGTTTGTGAGATTTTTAAACAAAACTG
TGTGTACAATGTAAACAAAAAGTTTGCGTGTTGTAGAAAATTGTGTCTTACACTTAACAGGATATACTTGGGTTGTGTTT
GAAAAAAGTGTCTACAAATTTGAAAATGTTGAACCATGCAAAATAGTGTTTGTTTAATTTTATAATATGTTTATTATCAT
TAAGAAAATGTAAACATGTACTTAAATAATAA--------CTATGTATT-------AAAAA-ATTGAAAACAATTAATTT
AAAAATGTACATGATGTATTTTAAAATATCAAAAGTTTATCAAAAAATATTTTATGTGTGCGTTAAAAATGTATATTGGG
TACGAAGAAAAAATAGACATGTGTAAAACAGAAAAACGATAACAAAACAAAAAGGCAAAAACAAAGAAAACGAGGAGCAG
TGGGCGCGCGCGAGCGACGCTGCTAATGGGCCGGCCCAATTCAGCAAATACCGGCTAAATCCTCTCAAGGTTTAAAATAG
ACCGGGATAACAGAGTTTGGTGTGCTGATTTCAGGGATTGAGAGTTCAGGGTTTGATTTAGCTTTCGTCGACAAATTCAA
GGTTTGTTTTGGACTTTTTCC-----------------------------------------------------------
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-----------------
>chr3A_10
---------AAAAATGTAGCATTTCAATAATGTTCATGAGTTTCAAAAA-ATGTGTTTGTGACATTTTCAAACACAAATG
TGTGTACAATGTAAAGAAAAAGTGTGCGCGTTGTAAAAAATTGTGTCTTACATTTAACAGAATATACTTGGCATGTTTTT
GAAAAAAGTGGCTACATATTTAAAAATGTTGAACCATGCAGAAGAGTGTTTGTTTGGTTTTATAAAATGTTTATTGTCAT
TGAGAAAATGTAAACATGCATTTGGAAAAAAA--------ATATAACCATGTATTCAAAAA-AATGAAACAATTTAATTT
AAAAATGTACATAATGTATATGGAAGTATCAAAAGTTTATCAAAAAATATTTTATGTGTGCGTTAAAAATGTACATTGGA
TAAGAAGAAAAAATAGACAGGAGTAAAAAAGAGAAAAGGAAAAAAACAAAACAAGGAAAAAAAAAGGAAACCCAGAGCAG
TGCGCGCACGCGAGCGACGATGTTAATGGGCCGGCCTAATTCAGCAAATACCGGCTAAGTCGTCTCAAGGTTTAAAATAT
ACCGGGATAAGGGAGTTTGGTGTGCTGATTCCAGGGATTGAGAGTTCAAGGTTTGATTTAGCTTTCGCCGACAAATTCAA
GGTTTGTTTTAGACTTTTTCC-----------------------------------------------------------
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-----------------
>chr3A_17
----------------TAGCATTTTAATAATGTTTACAAGTTTCAAAAA-ATGTGTTTGTGAGATTTTCAAACAAAACTG
TGTGTACAATGTAAATAAAAAGTTTGCATGTTGTAAAAAATTGTGTCTTACACTTAACAGAATATACTTGGGTTGTGTTT
GAAAAAAGTGTCTACAAATATGAAAATGTTGAACCATGCAAAAGAGTGTTTGTTTAGTTTTATAATACGTTTATTATCAT
TAAGAAAATGTAAACATGTACTTAAATAATAA--------ATATGTATT-------AATTTTTTTGAAAACATTTAATTT
AAAAATGTACATGATGTATTTTAAAATATCAAAAGTTTATCAAAAAATATTTTATGTGTGCGTTAAAAATGTATATTGGG
TACGAAGAAAAAATAGACATGTGTAAAAAAGAAAAAACATAACAAAACAAAAAGGCAAAAACAAAGAAGACCAGGAGCAG
TGGGCGCGCGCGAGCGACGCTGCTAATGGGCCGGCCCAGTTCAGCAAATACCGGCTAAATCCTCTCAAGGTTTAAAATAG
ACCGGGATAACAGAGTTTGGTGTGCTGATTTCAAGGATTGAGAGTTCAGGGTTTGATTTAACTTTCACCGACAAATTCAA
GGTTTGTTTTGGACTTTTTCC-----------------------------------------------------------
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>chr2B_646
CCCAA---------------------------------------------------------------------------
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-----------------------------CCCAAACCATGTCCTTGCTCAACAAAGCCAAACGTTTTGATCGAAACTCCG
AAGGAAAAGCCCAT---------CCCATGGCGATTCGATCTCGTGCCTTTTGCTGCGAAATATCACCACCCAACATCTTC
CGGGGGGAGAAGAGAAGAGGCGAATCGCCTACAGGA-AGGGCAATATGGTCCGAACACAGGCGGGCTTTCCTTTCTCCGG
AACCCAGAAACACCAGACGCGTTCCTCCGCTTCCTTCTCTTCTCCCCCTCCTTAAACCTGCCTCTCGTCTCTTCTAGATT
TGCGCCCTCCCCTTTCCGCCCCTGGTCTCCTGCCCCTCCCTCGCTCCCACCAATCCGCCCGCCC-CCGCCGCGCAATGCT
GGCCGTCGCGGCGGGGCAAGCGACGCTGGGGGAGCCGTCCTCGTCGGCGGCGGCCGCCGCCGCCGT---GCCCAAGCGCC
GGGATCCCACGCCGGATCACCCACCGTATTCATGGGTAATCACTCCTCCCCGGCCGATTAATCGCCTACCTATTCCTCCC
CGCTTATTCGGTCGATTCTCTCTCTCTCCACCGGAAGAACAGTTGGATTTGCTCTTTAATCTCCACCCACCCACCTGAAT
CGAATTAGGAAATCACTAATTGAGCATCGCCAGCGACGGATGCTCCTCATTGATTCGGAAAGAAAAATTCGACCATCGTC
TCCGATGTGAGGAGAAATCGCTTGCGCTCAATCTGGTTGGTTGT-----------TCAATGGCAATGGGGTTTGGATGGG
CTGCCGCCGCTGGC-TGACGTTTGCGTCCTCGTCTGGTTGCAGATGATCGAAGAGGCGATCCAGGCGCTGGGCGAGGACG
GCGGCTCGGCGGAGTCCGCCATCTCGGGCTTCATCCGCGACAGGTACCCCGGCGTCCCCGCCGCGCACGACAGGTTCCTC
CGCTACTACCTCGCCAAGCACGTCGCCGAGGGCCTCTTCGTCTGCGCCGCGCCTGGGCGGTACTCTTGCTGCTCCGACGA
CGAGCCCCAGCCCGAGCTCGCACTCACCGAGGTCCTGGCGGCGGCGGCTGCGCCGGCCAAGGCTGGGCCTCCGCCGACAG
AGCCCAAGCGCGCCCGCGGTCGGCCCAGGAAGGATGACTCGCTGGTGGTGGTCAAGCGTGGTCGCGGTCGGCCTAGGAGG
GATGATTGGCAGGCCGCTGCGGTGGCGGTGAGTGCTGGGCCTCTGATGACAGGGGCCAAGCGCGGGCCCGGTCCGCCTAA
GAAGGATGGCTCGCCGGCGGCAGGGGCCAAGCGCGGCCGCGGTCGGCCTCGGAAGGATGGCTTGCCGCCCAAGCCGGCTT
CTGGCAAGAAGTTTGTGAGCGGGTCGCCATCCGCGATGCCCAAACGCCGTGGCCGGTCTCGCCTTCTGACGGAGGTAGGG
GCGGCCGACGTCCCGGGCGAAGCGCTCGTCACGGACAAGAAAGACAACAATGAGGCTCCATCCGCCACTGATAAGAACCA
TGGGGAACCTCGCGAGCTGGCACTTGTGATCGTCAACGACGGCTCTGGTGCAGCATTAGTCACGGAGGAAGATGGCGGCG
AGGCTCCAGCAGCCAAGCGGCCGCTCTTGGCCAAGGAACCTGCAGCATTCAGTACGCCAGAGTGCAGCACCCAGCCCTGC
AAACTGCCCCTTGTGGCAGCTGACGAAAACTCTGCTCCGGCCCTAGCCTCCGACAAGGAGGGTGACACCGAAGCTCCATT
TGTGAAGCACAAGCGCCGTCGTCGGACCTGCAGATCAGAGCCGGCAAAATCCACCTGCGGCTCTGCCTCAACATCAATTG
CAGACAAGAAGGCTGGTGGCAACGTTGCATCTGCTCCGCCCAAGGGCCGTGGCTGGTTGCGCAAACCGACATTGATGGAT
GCCGCCGCGGATGAAATTACACCCAATGAGGCTCGGTCAGCATTGGTCAAGCCGCGCCGCAAACCTCGCAAACAATTTCT
GCTGAACTTTTATGACGAGGTACCAAATAATCCGAAGTTTTGTGTCCTCGCATTGCCTGCCCAGGTGCCAGGGGCAACAA
AGGCGCCGTAGTTCTGAAGCATGGCAGCTCATGAAACATCGTCACATAGTTGAAAGAACACCTCTTCAGTTCCTAAATGC
AGTGCACAGGACGGTAGCTTTTGTGTTCTATCCATCATCGGTAGTTTTAGGTTTTTCTTTATGTTGTTGTTGAACTTCAG
CAGTTTTAGGGGTTGTTTGAACTAGGTAGGGATATTTCTTTTCGGAGCTCCAGTTTAGTTCAAGTCTGAACAAATACCAC
CATCCGTCCAACGAGGCCCCGAGGGTTTGGCTTGAGACTGAATTTGTATGAATCTCGTCAGCTCATGCAAAAAGAGAAAC
AGATGCAATTGTTCTGGTTCTTTGA-------------------------------------------------------
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---------------------------------------------------------------------TATTTGTCTGC
CATAAGTTGTTGAAACTCTCAGTTACATGAATCTTGCAGAAGTAATCTCTTACATTTGGGGCCATCAAATCTCAGACCAG
AAATGTTGAAACCAATGATGCCAAAATAACCTTTTTGATATTAAAATCCAGAGACTTTTGGTAAACATTCAACAACTCTG
AAGGTTTACAATCACACAGAAC---TAGATCACCATAGTTGGCAACCCAGGGCAGATAATTAGCT---------------
-----------------------------------------------------AACAGAAAGAACAAACCCATCATCTCT
GCCATGTACACCGAAAATTATTTCAATTGGACTCCTGGCATGCCGGCAACTTATGATGAATTTACCAAATCAATGATGGT
GGATATAAGAACTGTCATCCACCACGGTGTCGGGCATGGATTATTCGATAAGGAATCTGGAATTCCTCATGCCTCCCAGC
CCCTCAAGATGGTGGCGCGAGCAACCCGGTTCACTCCCAAGGTGAATGCTCCCATCCTAAGGTTGCAATCTTGAGACTTG
CACATGGCCTTGATGTTCTGGAACGCGCTGTTCATGTACTTATGGAGCTCCATGTTCACCTTTTCTTCTTCCCACATGAA
TCCTTGAATGTTCTGC-
>chr2A_683
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------------------------------------------------------------ACGTCTTGATGATTTATTAT
ACTCCGGGATGAAGGAAGAGGAGCCCATGGCGATTCGATCTCGAGCGTTCTGCTGCGAAATATCTCCACCCAACATCGGA
GACGACGAC---AGAAGAGGCGAATCACTTACAGCA-AGGGCAATATGGTCCCAACA-GGTCGGGCTTTCCTTTCCCCGG
AACCCAGAAACACCAGAAGCGTTCCTCCGCTTCCTTC-CTTCTCCCCCTCCTTAAACCTGCCTCTCGTCTCTTCTAGATT
TGCGCCCTCCACTTTCCGCCCCTGGTCTCCTCCCCCTCC----CTCCCACCGATCCGCCCGCCCCCCGCCGCGCAATGCT
GGCCGTCGCGGCGGGGCAGGCGACGCTGGGGGAGCCGTCCTCGTCGGCGCCGGCCGCCGCCGCCGCCGCGCCCAAGCGCC
GGGATCCCACGCCGGATCATCCACCGTATTCATGGGTAATCACTCCTCCCCGCTCGATTAATCGCCTACCTGTTCCTCCC
CGCTTATTCGGTCGATTCTCTCTC----CACCGGGAGAACAGTTGGATTTGCTCTTTAATCTCCACCCACCCACCCGAAT
CGAATTAGGAAATCGCTAATTGAGCATCGCCAGCGACAGATGCTCCTCGTTGATTCGGAAAGAAAAATCGAGT-ATCGCC
TCCGATGTGAGGAGAAATCGCTTGCTCTCAATCTGGTTGGTTGT-----------TCAATGGCAATGGGGTTTGGATGGG
CTGCCGCCGCTGGTTTGACGTTTGCATCCTCGTCTGGTTGCAGATGATCGAAGAGGCGATCCAGGCGCTGGGCGAGGACG
GCGGCCCGGCGGAGTCCGCCATCTCGGGCTTCATCCGCGGCAGGTACCCCGGCGTCCCCGCCGCGCACGACAGGTTCCTC
CGCTACTACCTCGCCAAGCACGTCGCCGAGGGCCTCTTCGTCTGCGCCGCGCCTGGGCGGTACTCTTGCTGCTCCGATGA
CGAGCCCCAGCCCGAGCTCGCACTCACCGAGGTCCTGGCGGCGGCG---------G---------------------CAC
AGCCCAAGCGCGCCCGCGGTCGGCCTAGGAAGGATGACTCGCTGGTGGTGGTCAAGCGTGGGCGCGGTCGGCCTAGGAGG
GATGATTCGCAGGCCGCTGCGGTGGCGGTGAGTGCTTGGCCTCCGATGACA-----------------------------
----------------------GGGGCCAAGCGCGGCCGCGGTCGGCCTCGGAAGGATGGCTCGGCGCCCAAGCCGGCTT
CTGGCAAGAAGTTTGTGAGCGGGTCGCCATCCGCGATGCCCAAACGCCGTGGCCGGTCTCGCCTTCTGACGGATGTAGGG
GCGGCCGACGTCTCCGGCGAAGCGCTCGTCACGGACAAGAAAGACAGCACTGAGGCTCCATCCGCCACTGATAAGAACCA
TGGGGAACCCCGCGGGCTGGCACTTGTGATCGTCAACGACGGCTCTGGTGCAGCATTAGTCACGGAGAAAGATGGCGGTG
AAGCTCCTGCAGCCAAGCGGCCGCTCTTGGCCAAGGAACCTGCCGCATTCAGTACGCCAGAGTGCAGCACCCAGCCCTGC
AAACTGCCCCTTGTGGCAGCTGACGAAAACTCTGCTCCGGCCCTAGCCTCCGACAAGGAGGGTGACACTGAAGCTCCATT
TGTGAAGCACAAGCGACGTCGTCGGACCTGCAGATCAGAGCCGGCAAAATCCACCTGCGGCTCTCCCTCGACATCAATTG
CAGACAAGAAGGCCGGTGGCAACGTTGCATCTGCTCCACCCAAGGGCCGTGGCTGGTTGCGCAAACCGTCATTGATGGCT
GCCGCCGACGATGAAATTACACCCAATGAGGCTCGATCAGCACAGGTCAAGCCGCGCCGCAAACCTCGCAAACAGTTTCT
GCTGAACTTTTATGATGAGGTACCAAATAGTCCGAAGTTCTGTGTCCTCGCACTGCCTGCCCAGGTGCCGGGGGCAACAA
AGGCGCTGTAGTTCTGAAGCATGGCAGCTCATGAAACATCGTCACATAGTTGAAAGAACACCTCTTGAGTTCCTAAATGC
AGTGCACAGGACGATAGCTTTTGTGTTCTATCCATCATCGGCAGATTTAGGGTTT--TTTTTGTTGTTGTTGAATTTCAG
CAGTTTTAGGGGTTGTATGAACTAGGTAGGGATATTTCTTTTCGGAGCTCCAGTTTAGTTCAAGTCTGAACAA-TACCAC
CATCCAT----------CCTGAGGGTTTGCCTTGAGACTGAAATTGTATGGATCTCGTCAGTTCATGCAAAAAGAAAAAC
AGATGCAATTGTTCTAGTTCTTTGATACTCCCTCCAATCCATATTACTTGTCGCTCAAATGGATGTATCTAGCACTAAAA
TACATCTAAATACTTACGTCCGTTTGAGCGACAAGTAATATGGATAGGAGGGAGTATTTGTCTGCCATAAGTTACTGATA
CTCTCAATTGCCTGAATCTTGCAAAAGTAATCTATTACATTTGAGGCCATCAAATCTCAGACCAGAAATGTTGAAACCAA
TGAGGCCAAAATAACCTTTTTGATATTAAAATCCAGAAACTTTTGGTAAACATTCAACAAATCTGAAGGTTTACAATCAC
ACAGAACTAGATCACATAGTTGGCAACCCAGGGCAGATAATTAGCTAACAGAAAGAACAAACCCATCGTGTCTGTTTGAA
CGACAAGTAATATGGATGTATCTAGCACTTACGTCCGTTTGAGCGACAAGTAATATGGATAGGAGGGAGTATTTGTCTGC
CATAAGTTGCTGAAACTCTCAATTGCCTGAATCTTGCAAAAGTAATGTATTACATTTGGGGCCATCAAATCTCAGACCAG
AAATGTTGAAACCAATGAGGCCAAAATAACCTTTTTGATATTAAAATCCAGAAACTTTTGGTAAACATTCAACAAATCTG
AAGGTTTACAATCACACAGAAC---TAGATCA-CATAGTTGGCAACCCAGGGCAGATAATTAGCT---------------
-----------------------------------------------------AACAGAAAGAACAAACCCATCGTCTCT
GTCATGTACACCGAAAATTATTTCC-------------CATGCCGGCAACTTATGATGAATTTACCAAATCAATGATGGT
GGATATAAGAACTTTCATCCACCACGCTGCCGGGCATGGATTATTCAATAAGGAATCTGGAATTCCTCATGCCTCCCAAC
CCCTCAAGATGGTGGCGCGAGCAACCCGGTTCACTCCCAAGGTGAATGCTCCCATCCTAAGGTTGCAATCTTGAGACTTG
CACATGGCCTTGATGTTCTGGAACGCGCTGTTCATGTACTTATGGAGCTCCATGTTCACCTTTTCTTCTTCCCACATGAA
TCCTTGAATGTTCTGCG
>SNPs
---------------------------------------------------------------S----------------
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----------S----S----------------------------------------------------------------
--------------------------------------------------------------------------------
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---S----------------------------------------------------------------------------
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------------S-----------------------------------------------------------------S-
----------------------SSSSSSS-------S-----------------S--------------------S-SS-
SSS-SSS-S------S-S--------------------------------------------------------------
------------------------------------S-----------------S-------------------------
-S-------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-----------S----------------------------
--------------------------------------------S-----------------------------------
--S-----S--------S-------S-S----------------------------------------------------
----------------------------------S---------------------------------------------
-------------------------------S-SS-S-SSSSSSSSSSSSSSSSS-------------------------
----------S----------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S--------------S----------------------------------
-----------------------------------SS-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------S-------------------------------S-S-------------------
--------------------------------------------------------------------------------
-----------------S-------------------S------------------------------------------
--------------------------------------------------------------------------------
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-----------S---------------------------SS--S--S---------------------------------
---------------------------------S----------------------------------------------
---------------------------------S----------------------------------------------
-----------------------------------------------------------S--------------------
---------------S----------------------------------------------------------------
------------S--------------------S----------------------------------S-----------
--------------------------------------------------------------------------------
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--------------------S---------------S-------------------------------------------
------------------------------------------------------S-------------------------
----------------------SSS----------------------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>forward_882
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---------------------------------------------------------------GGCTTTCCTTTCCCCGG
AG------------------------------------------------------------------------------
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>reverse_2219
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----------------------------------------------------------CTTACGGAGGAAGATGGCGG--
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>forward_1415
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-----------------------------------GATTAGCTCGCGCTTGGTTG-------------------------
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>reverse_3749
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--------------------------------------------------------------------AGAAAGAACAAC
CCAGGGCA------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
