>input_sequence_46907
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----------------------------------------ATGGCATCGGCCACCAGCTCCCGCCA---CCTCCTCCTTC
TCGTCCTTTGGCTCAGCGCGTCCGCGAGCACTGCCTGGGCCCATGGAGGTGGCGGACACGGCGACGGC---------GAC
GCGGACGGCGGCGCGAAGGCGAAGCCGGATCTGCGGGCGCCGGGGCTGGTGGCGGTGAAGCTGTGGTGCCTGGCACTGGT
GTTCGCGGGCACCCTGGCCGGCGGCGTGTCCCCCTACTTCATGCGGTGGAACGAGGCGTTCCTGGCGCTGGGCACGCAGT
TCGCCGGCGGGGTCATCCTCGGCACCGCCATGATGCACTTCCTCAGCGACGCCGACGAGACCTTCGGGGACCTCGCCCCC
CACAGCGACTACCCGTTCGCCTCCATGCTCGCCTGCGCCGGGTACGTCCTCACCATGCTCGCCGAGTGCGTCGTCTCCTC
CGTCGTCGCGCGCGGCCCCGGCCGGACCGCCCCG---------------------AGTGCAGGTGAGCA------GCA--
-GCAGGTCCCACGTTCTCCGCTGAAACTAACTGCTATATCTGCGCATA----------------------------CAGC
AGCTGGCCGGCGGT-----GTAAAGGTGGCAGCTGCTCGTCGGGT-----------------TAAATGCAAATTTGCTCC
CTTTCTATTCCGGGGCGGGCGCTACGTGCTACGTGATTGGCAATCTTTTTTTTTTTTGAAGGGGTGATTGGCAATCTTTC
GATGCGCATTTTCACGGTCTTATCGTTACTCCTGCGATC---TTATTAGTCATGGTT-TAAACGTTCACTTGAGAATCCA
ACTCTGTTTACAAACTTCCAGGAGCGCTGGAGGAGGGCAAGCTGAGCAGCACCGATGACAACAGCATCGAACCACAAACA
TCTGTAAGTG---CAGCCTCCGAGTCCGGTGTTGATTTGGCA---------GTCGTTCAGACTACCACACAGCTCTGTGT
ACTCGCGCGTGCAG---------TATGTAA-TAACTTGGCGGTGCC-GCGCGT--GCAGGACGCGCACGGACCG------
---------TCGACTGCATCCATGCTGCGCAACGCGAGCACCATCGGCGACGGCGTGCTCCTCATCGCCGCGCTCTGCTT
CCACTCCGTCTTCGAAGGCATCGCCATTGGAGTTGCCGGTAAGACAGAGACAGAG---------CTTGAAATTTCCTGGA
TTTT-GACTGCCATG---A---ATGAGAGGATCTCTGCATCTTACTAGATGCGTGTGTACCTCTCGACCCTGCTTCAGTC
ACTG----------------------------------------------------------------------------
--------ATTTTCATGCCTACTTCTACTTGATCCGGTCTTCGAATCGGCGA----------------------------
--------------------------------------------------TTAC--------------------------
-------------------------------------------------TCGCAGAGACGGAAGCCGACGCGTGGAAGGC
GCTGTGGACCATCAGCCTGCACAAGATCTTGGCCGCGATCGCCATGGGCATCTCGCTGCTCCGGATGCTCCCCGACCGCC
CCCTCCTCTCCTGCTTCGGCTACGCCTTCGCCTTCGCCGTCTCCAGCTCCATCGGCGTCGCCGCC-GCATACTCGTCGAC
GCCACCACGGAGGGCCGGGTGGCCGACTGGATCTATGCCATCTCCATGGGCCTCGCCACGGGCATCTTTGTCTACGTCTC
CATCAACCACCTCCTCGCCAAGGGGTACAGGCCCCAGAGGCCCGTCGCCGCCGACACCCCCGTCGGCCGGTGGCTCGCCG
TTGCGCTTGGCGTCGGTGTCATCGCGGTCGTCATGATATGGGACGCCTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr5A_1_TraesCS5A01G256100
CGCCTTCATTGACATCAACTAGGCCCCCCCAAGCCGTCGATATATAACTTGATCAAGCTAGGCCACAAACTGTTGGTTGC
AGTAAAATTGAGATCGACTCAGACAGCGTGGAGGTGGTCGCGGCATTAAAAAATGGTTCTTCTTCTTCATTGGCCACTGC
CGTTTCCGACGACTGTTATTTTAAGTCTTTAGTTTCCGTCATGTTATCTTTGATAATTGTAATAGAGAGAGTAATCATGT
AGCTCACGAACTGGCTAGACTAGCTAGATTTTCTCCATCGAACACTTGGTTGGAATATGCAGTGATTCCTTTGATTGTAA
ACGATGCAATGGTTGTTATGACTGAATAAAGGAGGATTTGATTGTCAAAACGAGAACAATTTAAGAAGAGAAAGAGTACT
AGCCCGAGAAGAAGTGTACTCCGGCAACACGTGGGCCCACACATCAGCTCCTTGCAAGCTTCCTGCCCACGTATAAGGCT
CCGTTCGGTACGCAGGAATCTCACAGGAACTTTTGAAGGATCAGTTTCCTTAGTAACTTCTACCTGCAGTGCGTTCGTTT
CACAGGAATCTGGTATTCTGTTCCAGTGGAAAGTCACGTGAACCTGTACTTTTCACAGGAAACGAAAAATCCACCGGAAC
CTCATGTTCTGACCGAGACGCGAGGCTAAGCTCTTGCTATAGTGTGGTCCAGCCGAATAAACAATGGCTGCATGGGAGGT
CATCACGTCTAGAGACAATAAAAAACTCTAATCAGCTGTGAGAACGCCCATCTCTTCATCGTACTCCAAGGGCTCCATTT
CCTGCACACCGAACAGGTCACAAGGCTCCATAGGCTCGCTCTAGTCGCTCGACTCTATTCCTGTGCAGTTACTTATTCCT
TCATTTTTTCTGCCTCCAAACCAAACGGAGCCTAAATCCCCTCCCCGTCCTCGGCTCCTATCTACCTTCCGCATGGTTCC
CGCACTGCCCAGCACAGCAACGGCACGCACGGGCATGGGCATGGCATCGGCCACCAGCTCCCGCCA---CCTCCTCCTTC
TCGTCCTTTGGCTCAGCGCGTCCGCGAGCACTGCCTGGGCCCATGGAGGTGGCGGACACGGCGACGGC---------GAC
GCGGACGGCGGCGCGAAGGCGAAGCCGGATCTGCGGGCGCCGGGGCTGGTGGCGGTGAAGCTGTGGTGCCTGGCACTGGT
GTTCGCGGGCACCCTGGCCGGCGGCGTGTCCCCCTACTTCATGCGGTGGAACGAGGCGTTCCTGGCGCTGGGCACGCAGT
TCGCCGGCGGGGTCATCCTCGGCACCGCCATGATGCACTTCCTCAGCGACGCCGACGAGACCTTCGGGGACCTCGCCCCC
CACAGCGACTACCCGTTCGCCTCCATGCTCGCCTGCGCCGGGTACGTCCTCACCATGCTCGCCGAGTGCGTCGTCTCCTC
CGTCGTCGCGCGCGGCCCCGGCCGGACCGCCCCG---------------------AGTGCAGGTGAGCA------GCA--
-GCAGGTCCCACGTTCTCCGCTGAAACTAACTGCTATATCTGCGCATA----------------------------CAGC
AGCTGGCCGGCGGT-----GTAAAGGTGGCAGCTGCTCGTCGGGT-----------------TAAATGCAAATTTGCTCC
CTTTCTATTCCGGGGCGGGCGCTACGTGCTACGTGATTGGCAATCTTTTTTTTTTTTGAAGGGGTGATTGGCAATCTTTC
GATGCGCATTTTCACGGTCTTATCGTTACTCCTGCGATC---TTATTAGTCATGGTT-TAAACGTTCACTTGAGAATCCA
ACTCTGTTTACAAACTTCCAGGAGCGCTGGAGGAGGGCAAGCTGAGCAGCACCGATGACAACAGCATCGAACCACAAACA
TCTGTAAGTG---CAGCCTCCGAGTCCGGTGTTGATTTGGCA---------GTCGTTCAGACTACCACACAGCTCTGTGT
ACTCGCGCGTGCAG---------TATGTAA-TAACTTGGCGGTGCC-GCGCGT--GCAGGACGCGCACGGACCG------
---------TCGACTGCATCCATGCTGCGCAACGCGAGCACCATCGGCGACGGCGTGCTCCTCATCGCCGCGCTCTGCTT
CCACTCCGTCTTCGAAGGCATCGCCATTGGAGTTGCCGGTAAGACAGAGACAGAG---------CTTGAAATTTCCTGGA
TTTT-GACTGCCATG---A---ATGAGAGGATCTCTGCATCTTACTAGATGCGTGTGTACCTCTCGACCCTGCTTCAGTC
ACTG----------------------------------------------------------------------------
--------ATTTTCATGCCTACTTCTACTTGATCCGGTCTTCGAATCGGCGA----------------------------
--------------------------------------------------TTAC--------------------------
-------------------------------------------------TCGCAGAGACGGAAGCCGACGCGTGGAAGGC
GCTGTGGACCATCAGCCTGCACAAGATCTTGGCCGCGATCGCCATGGGCATCTCGCTGCTCCGGATGCTCCCCGACCGCC
CCCTCCTCTCCTGCTTCGGCTACGCCTTCGCCTTCGCCGTCTCCAGCTCCATCGGCGTCGCCGCC-GCATACTCGTCGAC
GCCACCACGGAGGGCCGGGTGGCCGACTGGATCTATGCCATCTCCATGGGCCTCGCCACGGGCATCTTTGTCTACGTCTC
CATCAACCACCTCCTCGCCAAGGGGTACAGGCCCCAGAGGCCCGTCGCCGCCGACACCCCCGTCGGCCGGTGGCTCGCCG
TTGCGCTTGGCGTCGGTGTCATCGCGGTCGTCATGATATGGGACGCCTGA------AT--GTGGTTCATGATAACTAGAA
CCATTTACCTATGGATGTAAGCATATTGTCCTGCTAA--------GCTAGTTGGACACCAGATTTGCAGTACCAGCTGAC
CAAATGAAGCAGCTAATGACAGATAAACATGCGCGCTTAATCGCTGGTTGATAAACATCCACAATGCCACA---------
--------------------------------------------------------------------------------
-------ATGTTAAACATCCACAATGCCACACACGACCTACCTACATGCTTCATTGGCTTCCTGTGCACAAATTATCTGT
ACAATGTTGC-TACGTCACTTGTCACTACAAATTATCTGACCTTGATGCTTTTCTATCCCTTTGCCAAAAAAATCAGAAT
ATCAGCCTCACTCATGTCCAGGATAGAATCAACTGGAATTGGACGTCTTCAAAACAATACTCTGCCAGCTCGGCCTACTC
GTGTCAATTCATTGGATCCGTTTCTAGGCCAGACCTTGAGATGACCTGGAGGCTGAAGATTGAGAGGAAAGTAAAAAAAA
TAATCATTCCCACTGAAGACAGATTGCGTGCCCAAGGGCCAAGGCTCCGGTCATAACAATGTGTGCTCCTTCTGCAATCA
GAAGCTTGAGGGGGTGTTTGGTTCAGGGACTTTTTAGTCCCAGAAATTAGAAAAAGTCCCTAAAAAGTCCCTAGGAACCA
AACGGGAGGGACTTTTTTTACAGGGACTAGAAAAAGACTCTACTGGAGAGTCTTTTTTGATTAGTCCCTGGGACTAGAAA
AAGTCCTAGGACTTCTGAACCAAACACTCCCTGAGTCTGCAGACAAATTGCGTGCCCAAGGCTCCGATCATAACAATGTG
CGCTCCTTCTGCAATCAGGAGCTTGAGTCTGCGCTGCACCTCTTCAGCACTTGCACTTTTGCCCAGGAAGTTTGGTTCAA
ACTGCACTATACCTTGCCACAACATTGTCTGATCTTTCCTAGCTCTTTGGACTCCATCCAGACTTGTGGCATTTCTGCTA
CCAAGGGCCCAAGAAGAACACTGCCGCCACGGCCTACTTTGCG
>chr5B_913
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TAAATCCCCTCCTCGTCCTCGGCTCCTATCTACCTTCCGC--------
---ACTGCCCAGCACAGCACCGGCACGCACGGGCATGGGCATGGCATCGGCCACCAGCTCCCGCCA---CCTCCTCCTTC
TCGTCCTTTGGCTCAGCGCGTCCGCGAGCACCACCTGGGCCCATGGAGGCGGCGGCGACCACGACGGC---------GAC
GCGGACGGCAGCGCGAAGGCGAAGCCGGATCTGCGGGCGCCGGGGCTGGTGGCGGTGAAGCTGTGGTGCCTGGCGCCGGT
CTTCGCGGGCACCCTGGCCGGCGGAGTGTCCCCCTACTTCATGCGGTGGAATGAGGCGTTCCTGGCGCTGGGCACGCAGT
TCGCCGTCGGCGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------AGTGCAGGTGAGCA------GCATC
AGCAGGTCGCACGTTCTCCGCTGAAACTAACTGCTATATCTGCGCATA----------------------------CACC
AGCTGGCCGGCGGT-----GTAAAGGTGGCAGCTGCGCCGTGCGCGTACGTTTGGTTAAATCTAAATGCAAATTTGCTCC
CTTTCTATTCTGGGGCGGGCGCTACGTGCTACGTGATTGGCAATCTTT-------------------------------C
GATGTGCATTTTCACGGCCTTATTGTTACTCCTGCGATCTTATTATTAGTCATGCTT-TAATG------TTCAGAATCCA
CCCCTGTTTACAAACTTCCAGGAGCGCTGGAGGAGGGCAAGCTGAGCAGCACCAACGGCAACAGCATCGAACCACAAACA
TCTGTAAGTG---CAGCCTCCGAACCAAGTGTTAATTTGACA---------ACCACTCGGACTAGCAGACAGCTCTGTGT
ATTTCGTACAGTATTGATGGAGATATGGAT-TGACTTGGTTGTGGT-GCACGTA--CAGGACGCGCACGGACCG------
---------TCGACTGCATCCATGCTGCGCAGCGCGAGCACCCTCGGCGACGGCGTACTCCTCATCGCCGCGCTCTGCTT
CCACTCCGTCTTCGAAGGCATCGCCGTCGGAGTTGCTGGTAAGATAGAGACAGAG---------ATTGATACTTCTTGAA
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CAA----------AAGATGCTCGCGACTTCCTCG
CGCATCCGCTTCAAG------CAATTAGCATTTCA--GATTCCGTTGAATTTAC--------------------------
-------------------------------------------------TTGCAGAGACGAAAGCCGACGCGTGGAAGGC
GCTGTGGACCATCAGCCTGCACAAGATCTTGGCCGCGATCGCCATGGGCATCTCGCTGCTGCCGATGCTCCCCAACCGCC
CCCTCCTCTCTTGCTTCGGCTACGCCTTCGCCTTCGCCGTCTCCAGCCCCATCGGCGTCGGCGTCGGCATACTCATCGAC
GCCACCACGGAGGGCCGGGTGGCCGACTGGATCTACGCCATCTCCATGGGCCTCGCCACGGGCATCTTTGTCTACGTCTC
CATCAACCACCTCCTCGCCAAGGGGTACAAGCCCCAGAGGCCCGTCGCCGCCGACACGCCCCTCGGCCGGTGGCTGGCCG
TCGTGCTTGGCGTCGGTGTCATCGCAGTCGTCATGATATGGGACGCCTGA------ATTCGTGATCCATGAGAACTAGAA
CCATTTACCTATGGATGTAAGCCTATTGTGCTGCTATAAGTTTCTGCTAGTTGGACACCAGATTTGCAGTACCAGCTCAT
CAAATGAAGCAGCTAGTGACAGATAAACAT--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr6A_955
GGTTCCCAGCGCGCCACACCAGAGCACCAGAGCGCG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCACCGGCATGGCCATGGCCACGGCCGCCAGCTCCCGCCA---CCACCTCCTCC
TCCTCCTCTGGCTCTGCGCGGCCGCCAGCACGGCCTGGGCCCATGGAGGCGGCGGGGACGACGACGCGGACTCCGGAGAC
GCGGACGCGGACGGCGGTGAAAAGCCGGACCTGCGTGCGCCGGGGCTGGTGGCGGTCAAGCTGTGGTGCCTGGCGCTGGT
GTTCGCGGGCACGCTGGCGGGCGGAGTGTCCCCCTACTTCATGCGGTGGAACGAGGCGTTCCTGGCGCTGGGCACGCAGT
TCGCCGGCGGGGTCTTCCTCGGCACCGCCATGATGCACTTCCTCAGCGACGCCAACGAGACCTTCGGGGACCTCGTCCCC
TCCAGCGAGTACCCCTTCGCCTTCATGCTCGCCTGCGCCGGCTACGTGCTCACCATGCTCGCCGAGTGCGCCATCTCCTC
CGTCGTCGCGCGCGGCCGCACCGCGCCC---------GCCGCCGCCCCGGCAACAACCGCAGGTGAGTTGTGAGCGGCCC
GGCAGCTCACGTGCTCTCCGCTGAAACTATACTTTACTTTTTACTATGTCCGTGCCGGCCGT----------------GC
TGGCACCCGGCGGC-----ATAAAGGAGGCAGCTGGGCGTTGGGT-----------------TAAATGCAAATTTGCGTT
CTATACTA--------------------------------------TTGTTTGTTATGAAGACATTTGCTAGTATG-CTT
AATTCCTGACGATCTTGATTA-----------------------------TATTCT--TACCG------ATCTTAATCT-
--CCTGTCTACAACTTTCCAGGGGAGCTGGAGGAGGGCAAGCTGGGCAGCACAAATGGCAACGGCTCGGATCAACGAGCA
GCTGTAAGTAGTGCAGCCTCCGAGTTCAGTCTTG---TT-TTTTGCTTTGTGACAGTCAGGCCACCAAACGAAACTGAT-
----------------------------------CTTGGTGGTGTCTGCGCAGGAGCAGGACGCGCACGGGCCGTCGGCG
ACGGGCCACTCGACGGCGTCGATGCTGCGGAACGCCAGCACCCTCGGCGACAGCATACTGCTCATCGCCGCGCTCTGCTT
CCATTCCGTCTTCGAGGGCATCGCCATCGGAGTCGCCGGTAAGAGAGACTCAC-----GACGTCGTTGAATCGTCCAAAA
TTTTTGACTTCCATGAGAA---AGAAGAAGACATCTGCATCTCATGTCTCGACCACTGGTTCGGTAC-------------
-------AGATGCTTGCAAGTTGCAACCATCAATCAACTCTGAAACCGACATCCGCTAGTTCTTAGCCAGCTTCGTCTCA
CTTCAGTCATTGTCATGCATACTTTTACTTGTTCAAGCCTTTGAATAGATGCTCCAGTCCAGATGCTCGCAACTTCCTCG
CGCGTCCATTGATGTCCACTTCAATCAGCATTTCACAGATTCCATTGACATTAACCAGAAAAACAGAAAATCCCAGATAA
TCAATCTTCCTACAGTTCTAACTATGCTTGCGACCTGTCGACATTGGCATTGCAGAGACGAAGGCGGACGCGTGGAAGGC
GCTGTGGACGATCAGCCTGCACAAGGTGTTCGCGGCGGTGGCCATGGGCATCGCGCTGCTCCGGATGCTGCCCAACCGCC
CGCTGCTCTCCTGCTTCGCCTACGCCTTCGCCTTCGCCGTCTCCAGCCCCGTCGGCGTCGGCGTCGGCATCGCCATCGAC
GCCACCACGCAGGGCGACGTGGCCGACTGGGTCTTCGCCGTCTCCATGGGCCTCGCCACCGGCATCTTCATCTACGTCTC
CGTCAACCACCTCCTCTCCAAGGGGTACAAGCCCCAGCGGCCCGTCAAAGCCGACACGCCCCTCGGCCGCTGGCTCGCCG
TCGTGCTCGGCGTCGGCGTCATCGCCGTCGTTATGATATGGGACACCTGA------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr6B_987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCACCGGCATGGCCATGGCCACGGCCACCAGCTCCCGCCA---CCTCCTCCTCC
TGTTCCTCTGGCTCTGCGCGGCCGCGAGCACGGCCTGGGCCCATGGAGGCGGCGGAGACGACGACGGGGACTCTGGAGAC
GCGGACGGCGGCGGCGAGGCGAAGCCGGACCTGCGGGCGCCGGGGCTGGTGGCGACGAAGCTGTGGTGCCTGGCGCTGGT
GTTCGCGGGCACGCTGGCGGGGGGCGTGTCGCCCTACTTCATGCGGTGGAACGAGGCGTTCCTGGCGCTGGGCACGCAGT
TCGCCGGCGGGGTCTTCCTCGGCACCGCCATGATGCACTTCCTCAGCGACGCCAACGAGACCTTCGGCGACCTCGTCCCC
TCCAGCGAGTACCCGTTCGCCTTCATGCTCGCCTGCGCCGGCTACGTGCTCACCATGCTCGCCGAGTGCGCCATCTCCTC
CGTCGTCGCGCGCGGCCGCACCGCGCCCGCCGCCGCCGCCGCCGCCCCGGCAACAAGCGCAGGTGAGCG------GGCCC
TGCGGCTCACGTGTTCTCCGCTGAATCTATACTTTACTACAG--TATATCCGTGCCGGCCGCGCGCATAGTAGAACCAGC
TGGCGACCGGCGGCATACTATAAAGGAGGCAGCTGGGCGTTGGGT-----------------TAAATGCAAATTGCTTC-
-----CTG--------------------------------------TTGTTTGTTACGAAGAAATTTGTC------ACTT
AACTTCTGATGATCTTGATTC-----------------------------CATATTGGTGATG------ATCTTGATTCA
CTGTTGATTACAATTTTCCAGGAGCGTTGGAGGAGGGCAAGCTGAGCAGCACGAATGGCAACGGCTCCGAGCAACAAGCA
GCTGTAAGTAGTTCAGCCTCCGGATTCAGTCTTACTTTT-TTTTGCTTTGTGACAGTCAGGCTACCAAACTGCTTTCTGT
ACCACATATACTACTATTTCGTACACTTGCGTAACTTGGTGGCGTC-GCGTAGGAGCAGGACGCGCACGGGCCGCCGGCG
ACGGGCCACTCGACGGCGTCGATGCTGCGCAACGCCAGCACCCTCGGCGACAGCATACTGCTCATCGCCGCGCTCTGCTT
CCACTCCGTCTTCGAGGGCATCGCCATCGGAGTCGCCGGTAAGAGAGA--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------
>chr6D_987
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCACCGGCATGGCCATGGCCCCGGCCACCAGCCCCCGCCACCTCCTCCTCCTCC
TGTTCCTCTGGCTCTGCGCGGCCGCCAGCACGGCCTGGGCGCATGGAGGCGGCGGGGACGCC------GACTCCGGAGAC
GCGGACGGCGGCGGCGAGGCGAAGCCGGACCTGCGGGCGCGGGGGCTGGTGGCGACGAAGCTGTGGTGCCTGGCGCTGGT
GTTCGCGGGCACGCTGGCGGGGGGCGTGTCGCCCTACTTCATGCGGTGGAACGAGGCGTTCCTGGCGCTGGGCACGCAGT
TCGCCGGCGGGGTCTTCCTCAGCACCGCCATGATGCACTTCCTCAGCGACGCCAACGAGACCTTCGGGGACCTCCTCCCC
CACAGCGAGTACCCGTTCGCCTTCATGCTCGCCTGCGCCGGCTACGTCCTCACCATGCTCGCCGAGTGCGCCATCTCCTC
CGTCGTCGCGCGCGGCCGCACCGCGC---CCGCCGCCGCCGCCGCCCCGGCAACAAGCGCAGGTGAGTCGTGAGCGGCCC
GGCAGCTCACGTGCTCTCCGCTGAAACTATACTTTACTTTTTACTATGT---------CCGT----------------GC
TGGCGCCCGGCGGC-----ATAAAGGAGGCGGCTGGGCGTTGGGT-----------------TAAATGCAAATCTGCGTC
CTATGCTA--------------------------------------CTGTTTGTCATGAAGAAATTTGCACCTATTACTT
AATTCCTGATGATCTTGATGA-----------------------------CATACC--TAATG------ATCATAATCCG
CTGTTAAC----AATTTCCAGGGGAGCTGGAGGAGGGCAAGCTGAGCAGCACGAATGGCAACGGCTCGGATCAACAAGCA
GCTGTAAGTAGCTCAGCCTCCGGATTCAGTCTTAGTTTTCTTTTGCTTTGTGACAGTCAGGCTACCAAATTGCTTTCTGT
ACTACATATACTACTATTTCGTACACTTGTGTAACTTGGTGGTGTC-GCGCAGGAGCAGGACGCGCACGGGCCGTCGGCG
ACGGGCCACTCGACGGCGTCGATGCTGCGGAACGCCAGCACCCTCGGCGACAGCATACTGCTCATCGCAGCGCTCTGCTT
CCACTCCGTCTTCGAGGGCATCGCCATCGGAGTCGCCGGTAAGAGACAAGTGGGATAGGACGTCCTTGAATCGTCTAAAA
CTTT-GACTTCCATCTTCCATGAGAAGAAGATATCTGCATCTCATGTCTCGACCACTGGTTTAGTAGGATTAGTAGCGTA
GAATTGTAGATGCTTGCAAGTTGCAAGCATCAATCAACTCTGAAACTGACATGCTCTAGTTCATATCCAGCTTCGTCTCA
GTCCAGTCATTGTCACGCATACTTTTCCTCGTTCCAGCCTTTGAATCAA----------CAGATGCTCGCAGCTTCCTCT
TTCGTCCGTCGACGTCCACTTCAATCAGCATTTCA--GATTCCGTCAAAATTAACCAGAAAAATATAAAGTCCT-GATAA
TCAATCTTGAATCTTCCTACAGCACTGATCA---------ACATTGGCATTGCAGAGACGAAGGCGGACGCGTGGAAGGC
GCTGTGGACGATCAGCCTGCACAAGGTGTTCGCGGCGGTGGCCATGGGCATCGCGCTGCTCCGGATGCTGCCCAACCGGC
CGCTGCTCTCCTGCTTCGCCTACGCCTTCGCCTTCGCCGTCTCCAGCCCCATCGGCGTCGCCGTCGGCATCGCCATCGAC
GCCACCACGCAGGGCGCCGTGGCCGACTGGATCTTCGCCGTCTCCATGGGCCTCGCCACCGGCATCTTCATCTACGTCTC
CGTCAACCACCTCCTCTCCAAGGGGTACAAGCCCCAGCGGCCCGTCGCCGCCGACACGCCCCTCGGCCGCTGGCTCGCCG
TCGTGCTCGGCGTCGGGGTCATCGCCGTCGTCATGATATGGGACACCTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr5D_1710
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------ATTAGTCATGGTTTTAATG------TTCAGAATCCA
CCCCTGTTTACAAATTTCCAGGAGCGCTGGAGGAGGGCAAGCTGAGCAGCACAAATGGCAACAGCTCCGGACCACATACA
GCTGTAAGTA---CATCCTCCGAGTCCGGTGTTGATTTGACA---------GTCATTCAGACTACCACACAGCTCCGTGT
ACTCGCGCGTGCAG---------TATGTAA-TAACTTGGCGGTGTC-GCACGT--GCAGGACGCGCACGGACCG------
---------TCGACTGCATCCATGCTGCGCAACGCGAGCACCATCGGCGACGGCGTACTCCTCATCGCCGCGCTCTGCTT
CCACTCCGTCTTCGAAGGCATCGCCATTGGAGTCGCCGGTAAGACAGAGACAGAG---------ATCAATATTTCCTGAA
TTTT-GACCGCCAC----------GAGAGGGTCTCTGCATCTTATATAT---GTGTGCACCTCTCGACCCTACTCCAGCC
ATTG----------------------------------------------------------------------------
--------ATTTTCATGCCTACTTTTACTTGATCCGGTCTTTGAATCGACGA----------------------------
--------------------------------------------------TTACTCGCAA--------------------
---------------------------------------------------GCAGAGACGGAAGCCGACGCGTGGAAGGC
GCTGTGGACCATCAGCCTGCACAAGATCTTCGCCGCGATCGCCATGGGCATCGCGCTGCTCCGGATGCTCCCCGATCGCC
CCCTCCTCTCCTGCTTCGGCTACGCCTTCGCCTTCGCCGTCTCCAGCCCCATCGGCGTCGGCGTCGGCATACTCGTCGAC
GCCACCACGGAGGGCCGGGTGGCCGACTGGATCTATGCCATCTCCATGGGCCTCGCCACGGGCATCTTTGTCTACGTCTC
CATCAACCACCTCCTCGCCAAGGGGTACATGCTACAGAGGCCCGTCGCCGCCGACACGCCCGTCGGCCGGTGGCTCTCCG
TCGTGCTTGGCGTCGGTGTCATCGCAGTCGTCATGATATGGAACGCCTGATCCTGAATTCGTGATTCATGAGAACTAGAA
GCATTTAGCTATGGATGTAAGCCTATTGTGCTGCTATAAGTTTCTGCTAGTTGGACACCAGATTTGCAGTACCAGCTGAT
CAAATGAAGCAGCTAATGACAGATAAACATAAGCACTAAATCCCTGGTTGTTTCAATACGCATTTAGTGTGTGTGTATAT
ATATATATCAACCTGTATTCTTTCCTTAATCCCCTGGATAATACTGTATTTTGCTGTGTTTCGTTAATACTCCACCATCA
ACCAAGCATGTTAAACATCCACAATGCCACACACGACCTAC----ATGCTTCATTGGCTTCCTGTGCACAAATTATCTGT
ACAATGTTGCTTACGTCACTTATCACTA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>SNPs
S-SSSS--SS-SSSSSS--S--SS-S--SS-SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S---------------------------SSSSSSSS
SSS----------------S------------------------------------------------------------
-------------------------------S-----------------S------S---S-------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------S--------------------------------------S---------------------S----
--------S-------------S------------------S----------------------------S-S-------
-----------------S-SS-SS-S-----S-S----------------------------------------------
--------S-----------------------------------------------------------------------
------------------------------------S---S---------------------------------------
----------S-------------------------------------S---S--S-----SSS-SSS-SS-S--SSS--
-----------------S-----S-------------------------------------SSSSSSSS--S--------
S-S--------------------------------------------------S---S----------------------
---------------------------------------S--------------S-------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------S-----------------------
------------------------------------------------------------------------------S-
-----------------------S--------------------SSSSSS-S-----S-------------S--S-----
-S------------------------------------------------------------------------------
------------------------S----------------S------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S---------------S----------------
--------------------------------------------------------------------------------
-----------------------------S---------------------------S----------------------
-S-S---------------------S-------------------------------------S-------S--------
----------------------S------S------S------------------------------------------S
------------------------------SS--S--S----S-------S-SS-SSS-SSSSS-SSSSSS---------
--------------------------------------------------------------------------------
-----------------------------------------SSSS-----------------------------------
---------------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_566
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CAGTGCGTTCGTTT
CACAGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_2298
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TACCTCTCGACCCTGCTTCA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>forward_796
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CATCGTACTCCAAGGGCTCC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_3070
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CCTGCTAAGCTAGTTGGACAC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
