>input_sequence_46893
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-------------------------ACCGCTCGCCCGCTCCGCCGCCATGAGGTCCAAGGCCAACGGAGACACCGCGTAA
GTCACCT------------GCTCCCGCTCCCCCGCCTCCTCTTCCTGCAGGGTTAACGTTCATGGCTTTCGGTCGTACCG
ACTATCTTGGTCTCCGTTTCCGCTGATGATTCCGTGGTGGTGCGC-TGCAGGTTCAAGGCCTCCGGCAAGAACAAGACGG
CCACCGGCGGCGTCGCCAAGCCGAAGCGCGCCCCCACCCCCTTCTTCGCCTTCCTGTAAGCCCTCACTCCCCGCCACCTC
CCCCAGATCTGTTCGTCTCCGTACTCTAATATGTTTTGAAACTTCGGCGGCAGGGCTGAGTTCAGGCCACAGTACATGGA
GAAGCACCCCGAGGCAAAGGGCGTCGCGGCCGTGAGTCTCCCACTCTTCTCTTTTGCCAGTTTGCTTCTAGGCTTTTGCT
TTTAGGGTTTTGCATCTAGGGTTTCGTTTCCATGGCCCATGGCTCATAAGTGTGTGCATGTGCTGCTTGTTCTCTCTCTC
CTTTTAGGTCACCAAGGCGGCTGGGGAGAAGTGGCGCAGCATGTCGGATGAGGTTTGTCTGGTCTTTGCGCTGCTTATGC
AATTTATATT-GTGGAAACTTGCTCCGGTGCCCGTTATACTTGCCACAACTTGCCAAAATACTACTCCGGAGTACTAGGT
TGTCGCACCCGTTGTGTTAAATAACTAATTTTCAGTCCGTTGCCCCAAGATGATAACACAGCGAGTCTCGGTTACAATGT
CAGTGTGTCAGAATACGGATGATGTTTATATGATCTTTGGAGTGCTTGTGTAATTAATAATGTTGTTGGATACCTGTCCA
GTGCCGTTATATTTGCCG---CTTACCAAAATAACACCCAAGCTGTGCTCTATTACCCTTAACTGATAACGCTGTCAGTC
TCTGTTACAATGTTCTGGCTTTCTAAAATATTTCGCTCGAGGTTAGCAAAGGGAAAACGGAAATATGTTACCCCTTATCT
GCCACTGTCTTGCTGAGCTGTTTAATAACTCCAAGCGTCTGTTTGGTGAAGGAAAGATGAATTGTTTGGTCCTAACTGGT
TAATGCATGCCTTGTTTAGGAGAAGGCAAAGTATGGCGGCAAGAAGGCAGATGCCCCAGCAAGCAAGGCGGTGAACAAGA
AGGTAGTGTTATCGCTGCCATGAATCTTGTGAAGTAAAAGCTTATACTGCTATGCATTTAAGTAATATCAGTTTTGGGGT
AATAATGTTGTTTTCCATTTTTATCAGGAGAGCACCAGCTCCAAGAAGACCAAGACTAACGCTGACGAAGAAGGTTCTGA
CGTTGAGGATGATG---AGGTATATAAAATTTATGCATCGGTTAAGGTGGCATAAATTGCAGTGCTGATGGAATTTACTT
CTTGTTGCTAACATATGTTTGCTTGTCTTATCGCAGGAGGATGAGGAGTAAATAGTAGATGAGGGAACAGCAGCGGTGCA
AATCAGCGTTTGCTGCTTAGGGTTTAGATTGCCATGTCGATGTCCGGATTATGTAATGTTATGTAAGGAGAATGTTTAGA
TGCGTACTCCTGGGCTGTGGCATGCTGGAGATGTCTTTGTTTGAC--------AAGAAAAGCTTAAAACCCTT-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------
>chr2B_1_TraesCS2B01G422000
AAACAGAAACATGGTAGCAAAAAAATGGTTGATTCCAGCAAAAAAAGAAGACGGTTGTAACAAAAATTGGGGCTGCTTCC
AGCAAAACAGACCCTCGCCGGATCTCCCAGCACTTGTCGTCGTGGTTTCAAGCGATCCTGAACGCCGGTCGCTGCGGCTC
TCTAGCACTTGTCGTCGTTGTCTCCAGCACCGGTGGGTGTTGGTTGTAACACTTG------TCGCCTCCAAATCTTGTGG
CCACCGTCCCGGCACAGCATAGTTGCCAGTCCGAGCACCAGGCAGCGCCATCGGATGCAGCTCTAATCCACGGCC-----
-----------------GGTTGCAGCTCCTCGTCGCCACGGTTGCATCTCCACCAAACCAAGTCTGCAGATCCCGTCGCC
CGGTCCCAGCACCAGGCGACGGATTGGACAGAACAGCCGGCGGAACCTCCCTGCCACCGAAGTCAAGAGTGCAACCAGGG
TCCAGGGTGCAGCCGTCCAGCGCGCTGCCTGAGTCAATGGG-GTCAAGCTCCAAGGTACA-GACGGGGCAACGGCAGGTT
GCACGGGCGCGAGGCTGAGGGCATTGACCTGGGCGGAGGTGCGCGAGGAAGATCTGGATAGAAGAGGAAGATGCGAGAGA
AAGAGATGAAATGAGATGCGTCAAGGGCAGGTGC----------------GCGAAGAGATAAGGTAGCTGCGAAGCGGTG
AGTGGGCCAGTGCTACATGGAACAAGCAGGGG-CGATGGA--------TTCTAACTCATCCGACGACGCACGCGCGACCG
GCCCAAGCTTCGGCCGGTCCGCCGCTTACAAACATTTCCCATCTTGAAACCCTCGCAAATGTGCAGGGCCGGTCCAGTTT
CTCTCGGCCCAGTGCCCAGGTTTCCAGCGATCGC-AACCGATACCA--CCCCCAACGCGGCCACTCCACGCCCACACGTC
GCATTCTCCCCCTTTCGTTGTCCTTCCCCGTCCC-ATTCCCTCCGCTTCCCAGTCCGCAGCAGTTCCGCACCGACAC---
---CCTCACCCTCCCCAAAGCCCTAACCGCTCGCCCGCTCCGCCGCCATGAGGTCCAAGGCCAACGGAGACACCGCGTAA
GTCACCT------------GCTCCCGCTCCCCCGCCTCCTCTTCCTGCAGGGTTAACGTTCATGGCTTTCGGTCGTACCG
ACTATCTTGGTCTCCGTTTCCGCTGATGATTCCGTGGTGGTGCGC-TGCAGGTTCAAGGCCTCCGGCAAGAACAAGACGG
CCACCGGCGGCGTCGCCAAGCCGAAGCGCGCCCCCACCCCCTTCTTCGCCTTCCTGTAAGCCCTCACTCCCCGCCACCTC
CCCCAGATCTGTTCGTCTCCGTACTCTAATATGTTTTGAAACTTCGGCGGCAGGGCTGAGTTCAGGCCACAGTACATGGA
GAAGCACCCCGAGGCAAAGGGCGTCGCGGCCGTGAGTCTCCCACTCTTCTCTTTTGCCAGTTTGCTTCTAGGCTTTTGCT
TTTAGGGTTTTGCATCTAGGGTTTCGTTTCCATGGCCCATGGCTCATAAGTGTGTGCATGTGCTGCTTGTTCTCTCTCTC
CTTTTAGGTCACCAAGGCGGCTGGGGAGAAGTGGCGCAGCATGTCGGATGAGGTTTGTCTGGTCTTTGCGCTGCTTATGC
AATTTATATT-GTGGAAACTTGCTCCGGTGCCCGTTATACTTGCCACAACTTGCCAAAATACTACTCCGGAGTACTAGGT
TGTCGCACCCGTTGTGTTAAATAACTAATTTTCAGTCCGTTGCCCCAAGATGATAACACAGCGAGTCTCGGTTACAATGT
CAGTGTGTCAGAATACGGATGATGTTTATATGATCTTTGGAGTGCTTGTGTAATTAATAATGTTGTTGGATACCTGTCCA
GTGCCGTTATATTTGCCG---CTTACCAAAATAACACCCAAGCTGTGCTCTATTACCCTTAACTGATAACGCTGTCAGTC
TCTGTTACAATGTTCTGGCTTTCTAAAATATTTCGCTCGAGGTTAGCAAAGGGAAAACGGAAATATGTTACCCCTTATCT
GCCACTGTCTTGCTGAGCTGTTTAATAACTCCAAGCGTCTGTTTGGTGAAGGAAAGATGAATTGTTTGGTCCTAACTGGT
TAATGCATGCCTTGTTTAGGAGAAGGCAAAGTATGGCGGCAAGAAGGCAGATGCCCCAGCAAGCAAGGCGGTGAACAAGA
AGGTAGTGTTATCGCTGCCATGAATCTTGTGAAGTAAAAGCTTATACTGCTATGCATTTAAGTAATATCAGTTTTGGGGT
AATAATGTTGTTTTCCATTTTTATCAGGAGAGCACCAGCTCCAAGAAGACCAAGACTAACGCTGACGAAGAAGGTTCTGA
CGTTGAGGATGATG---AGGTATATAAAATTTATGCATCGGTTAAGGTGGCATAAATTGCAGTGCTGATGGAATTTACTT
CTTGTTGCTAACATATGTTTGCTTGTCTTATCGCAGGAGGATGAGGAGTAAATAGTAGATGAGGGAACAGCAGCGGTGCA
AATCAGCGTTTGCTGCTTAGGGTTTAGATTGCCATGTCGATGTCCGGATTATGTAATGTTATGTAAGGAGAATGTTTAGA
TGCGTACTCCTGGGCTGTGGCATGCTGGAGATGTCTTTGTTTGAC--------AAGAAAAGCTTAAAACCCTTGACTGCT
TTTCTTTCGTGGATTTCCACAGCATGTGGAAACAGTTATTATGCTTGCTTTTATCTACTGATCTGATGACTAGCCTGCTG
TTGGATTGCTATTAATTGCTTTATGTCTTGTGTTCGCCTTTCACTTAT-------------TGCTTCTCCTGCTGCACTT
GCT--TGAGTTTTGTGCAGCAAA-TTTTACTATTTATTAAGATTGTGTCCAATTGCTTTTTCCTCTGTAGTTGACCAATG
GCCATCTGTTCTACTCCCTCCGTCTCATAATGTAAGATGTTTTTTGACACTAAACTAGTGTAAAAAAACGTCTTACATTA
TGGGACGGAGGGAGTAACATTTTGCAGTCAGGAACGGAAGTTTTTTTTC---TTCTACTTAGACAGGATGTAAAAATCGA
TGCCAGTTGCTGGCTTGCCGCTGGTGGTTGTGTGACTTGTGTTAGCATAGTGCAGC-------CATGAAGCGTGGTATTA
T---------------------------------------------CTTCATCAGATTCAAACACGTTAAGTTTGCCCAT
GTATTCTTCAATCCAAATTTGTGCAGTGAAACAATTGATGGTGTAAGGTACCCTCTGTTTGCTATCTACAACAAAATCAT
TTTAAGGCAGCGCTGCATAATGTTCCACACGCGTGAGGTGAACTTGAACCGGAACTACTTGACGGACGATTTTTTGTTGA
ACGACGCATGCACGATAGCTGATCCAAGCGCCTACGGCTGCTCAGACTTGCCAGTGGATGGTTTGTGATGCAGTGTCGTG
CAAGCGTCGTGTGTGTAGCACTGCTCAACTTGAACATGGCAGTAACCTGTCAAGAACCTTAGCAAGTGTAAAGAGAAGTG
AAGAAGACTATCTACAGCTGACACCATGGCAAGTGCAGTTGGCCATCTCAAACAAACATAAAAA--A-GAGCTTTATAAC
TAGACGAAAAGCAACTGCATATAGCTGCCATTGCTATGATGAGCTCTTCTCGTTTTTCGTGGTTCGGAGCAGCTCTTTCG
CCATTGACGAGAAGGATTGAGCACCAT
>chr2B_1
AAACAGAAACATGGTAGCAAAAAATTGGCTGATTCCAGCAAAAAAAGAAGATGATTGTAACAAAAATTGGGGCTGCTTCC
AGCAAAAAAGACCCTTGCCGAATCTCC-AGTACTTGTTGCCGTGGTTTCAAGCGCCCCCAAACGCCAGTCGCTGCGGCTG
TCCAGCACTTGTCACCGTTGTCTCTAGCACCGGTGGGTGCTGGTTGCAGCACTTGTCGCCGTCGCCTCCAAATCTTGTGG
CCACCGTCCCGGCACATCATAGTTGCCGGCCCCAGCATCAGGCGGCGCCGTCGGATGCAGCTC-AACCCACGGCCGCTTG
CAGCTCCAAAACACCGGGGTTGCAGCTCCCCGTCGCCATGATTGCAGCTCCAC---ACCGAGTCTACAGATCCCGCCGCC
CGGTCCCAGCACCAGGCGGCGGATTGGACAGAACAGCCGGCGAAACCTCCCTGCCAACCAAAGCGAGGAGTGCAG-----
-CCAGGGTGCAGCCGTCCAGGGTGCTGCCTGAGTCGATGGGGGTAAGGCTCCAAGGTAAATGATGGGGCAACGGCAGGCT
GCTCGGGTGCGAGGCAGAGGGCATCGACCCGGGCGGAGGTG-GCGAGGAAGATGTGGATAGAAAAGGAAGACGCGAGAGA
AAGAGATAAGATGAGATGTGTCAGGGGCAGAGGAAAGAATGGTAGGTGCGGCGAAGAGATAAGGTAACTACGAAGCGGTG
AGTGGGCCAGTGCTACGTGGAACAAGCAGGGGTCGATGGA--------TTCTAACTCATCCGACGATGCGCGCGTGACCG
GCCCAAGCTTCGGCCGGTCCGCCGCTCACAAACATTTCCC----------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr6B_1
AAACAGAAACATGGTAGCAAAAAAATGGCTGATTCCATCAAAAAAAGAAGACGATTGTAACAAAAATTGGGGCTGCTTCC
AGCAAAAAAGACCCTCGCCGGATCTCCCAGCACTTGTCGCTGTGGTTTCAAGCGACCCTGAACGCCGGTCGCTACGGATC
TCCAGCAGTTTTCGCCGCGGTCTCCAGCATCGCTGGGTGCTGGTTGCAGCACTTGTCGCCGTCGCCTCCAGATCTTGTGG
CCACCGTTCCGGCACAACATAGTTGCCGGTCCCAGCACCAGTCACCACCATCGGATGCAGCTC-AATCCACGGCC-----
-----------------GGTTGCAGCTCCTCGTTGCCACGGTTGCATGTCCACCAAACCGAGGCTGCAGATCCGGCCGCC
CGGTCCCAGCACCAAGCGGCGAACTGGATAGCGCAGCCAGCGGAACCTCGATGCC-ACCAAAGCCAGGAATGCAG-----
-CCAGGGTGCAACCGTCCAGCGTGCTGCCTGAGTCGACGGG-GTCAGGCTCCGAGGTATA-GACGGGGCAACGCCAGGTT
GCACGGGCGCGAGGCTGAGGGCATCGACCAGGGCGGAGGTG-GCAAGGAAGATCTGGATAGAAGAGGAAGACACGAGAGA
AAGATATGAGATGAGATGCGTCAGGGGCAGGTG----------------GGCGAAGAGATAAGATAGCTGCGAAGCGGTG
AGTGGGCCAGTGCTACGTGGAACAAGCAGGGG-CGATGGATTCTAAGTTTCTAACTCATCGGACGACGCACGCGCGACCG
GCCCAAGCTTTGGCCGGTCCGCCGCTCACAAACGTTTCCCAT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr2D_786
ATCTTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GAACCCTTTGCGAGCGTGGAGAGCCGGTCCAGTTT
CTCTCGGCCCAGTGCCCAGGTTTCCACCGATCGC-AACCGATGACCACCCCCCAACGCGGCCACTCCACGCCCACACGTC
GCATTCTCCCCCTTTCGTTGTCCTTCCCCGTCCCCATTCCCTCCGCTCCCCAGTCCGCAGCAGTTCCGCACCGACGCCCT
---CCTCACCCTCCCCAAAGCCCTAACCGCTCGCCCGCTCCGCCGCCATGAGGTCCAAGGCCAACGGAGACACCGCGTAA
GTCA------------CCCGCTCCCGCTCCCCCGCCCCCTCTTCCGGCGCGGTTAACGTTCATGGCTCTCGGTCGTACCG
ACTAACCTGGTCTCCGTTTCCGC---TGATTCCGTGGTGGTGCGGTTGCAGGTTCAAGGCCTCCGGCAAGAACAAGACGG
CCACCGGCGGCGTCGCCAAGCCGAAGCGCGCCCCCACCCCTTTCTTCGCTTTCCTGTAAGCCCTCCCTCCCCGCCTCCTC
CCCCAGATCTATTCCTCTCCGTACTCTAATAATTTTCGAAACTTCGGCGGCAGGGCTGAGTTCAGGCCACAGTACATGGA
GAAGCACCCCGAGGCAAAGGGCGTCGCGGCCGTGAGTCTCCCACCCTTC-----TGCCAGTTTGCTTCTAGGGTTTTGCT
TTTAGGGTTTTGCATCTAGGGTTTCGTTTCCATGGCCCATGGCTCATAAGCGTGTGCATGTGCTGCTTGTTTATTTT-TC
CTTCTAGGTTACCAAGGCGGCCGGGGAGAAGTGGCGCAGCATGTCGGATGAGGTTTGTCTGGTTTTTGCACTGCTTATGC
AATTTATATTTGTGGAAAGTTGCTCCTGTG-CCGTTATACTTGCCACATCTTGCCAAAATACTACT----------AGGT
TGTCGTACCTGTTGCGTTAAACAACTAATTTGCAGTCCGTTGCCCCAAGATGATAACACAGCGAGTCTCCGTTACAATGT
CAGTGTGTCGGAATATGGATGATGTTTATATGATTTTTGCAGTGCTTGTGTAATTAATAATGTTGGTGGATACCTGTGCA
GTGCTGTTATATTTGCCG---CTTACCAAAATAACACCCAAGCTGTGCTCTATTACCCTTAACTGA--ACGCCGTCAGTC
TCCGTTACAATGTTCTGGCTTTCTAAAATATTTCGCTCAAGGTTAGCAAAGGGAAAACGGAAATATGTTACCCCTTATCT
GCCACTGTCTTGCTGAGCTGTTTAATAAGTTT-AGCGTCTGTTTGGTGAAGGAAAGATGAATTGTTTGATGCTAACTGGT
TAATGCATGCCTTGTTTAGGAGAAGGCAAAGTATGGCGGCAAGAAGGCAGATGCCCCAGCAAGCAAGGTGGTGAACAAGA
AGGTAGTGTTATCGCTGCCAAGAATCTTGTGACGT-AAAGCTTATACTGCTATGCATTTAAGTAATATCAGTTTTGGGGT
AATAATGTTGTTTTCCATTTTTATCAGGAGAGCACCAGCTCCAAGAAGGCCAAGACTGACGCTGACGAAGAAGGTTCTGA
CGTTGAGGATGATGCCGAGGTATATAAAATTTATGCATCGCTTTAGGTGGCATACATTGCAGTGCTGATGGAATTTACTT
CTTGTTACTAACATATGTTTGGTTGTCTTATCGCAGGAGGACGAGGAGTAAATAGTAGATGAGGGAACAGCAGCGGTGCA
AATCAGCGTTTGCTGCTTAGGGTTTAGCTTGCCATGTCGATGTCCGGATTATGTAATGTTATGTAAGGAGAATGTTTAGA
TGCGTGCTCCTGGGCTGTGGCATGCTGGAGATGTCTCTGTTTGACTAGTAGCGAAGAAAAGCTTAAAACCCTT-ACTGCT
TTTCTTTCGTGGACCTCCACAGCATGTGGAAACAGTTATTATGCTTGCTTTTATCTACTGATCTGATGACTAGCCTGCTG
TTGGCTTGCTATTAATTGCTTTATGTCTTGTGTTCGCCTTTCACTTTCTTATTGCTTCTCA---TTTTCCTGCTGCACTT
GCTCTCGAGTTTTGTGCAGCAATTTTTTAATATTTATTAAGGTTGTGCCCAATTGATTTCTCCTCTGTAGTTGACCAATG
GCTG--TGTTCT--------------------------------------------------------------------
---------------AACATTTTGCAGTCAGGACATCAGAAGT--AATTTTATTTTATTTCGACAGGATGTAAAAATCGA
TGCTAGTTGCTGGCTTGACGCTGGTGGTTGTGTGACTTGTGTTAGCATAATGCAGTTTTTTTTTTTGCGAGAAAATTTCC
GTTCTGTTAATGGCAGTACAACGAAAATCAGAAATAATAGAAATTACTTCATCAGATTCAAACACGTTAAGTTTGCCCAT
GTATTCTACAATCCAAATTTGTGCAGTGAAACAATTGGTGGTATAAGGTACCCTCTGTTTGCTATCTACAACAAAATCAT
TTTAAGGTGGCACTACATAATGTTCCACACACGTGAGGTG----------------------------------------
--------------------------------------------------------------------------------
--------------------------AACTTGAACATGGCGGTAACCTGTCAAGAACCTTAGCGAGTGTAAAGAGAAGTG
AAGAAGACTATCTACAGCTGACCCCATGGCAAGTGCAGTTGGGTATCTCAAACAAACATAAAAAAGA-GAGCTTTACAAC
TAGACGAAAAGCAACTGCATGTAGCTGTCTTCGCTATGATGAGCTCTTCTCGTTTTTCGTGGTTCGGAGCAGCTCTTTCG
CCATCGACGAGAAGGATTGAGCGCCAT
>chr2A_786
--------------------------------------------------------------------------------
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----------------------------------------ATCTTGGAACCCTTGCAACTGTGCAGAGCCGGTCCAGTTT
CTCTCGGCCCAGTGCCCAGGTTTCCACCGATCGCAAACCGATGACCACCCCGCAACGCGGCCACTCCACGCCCACACGTC
GCATTCTCCCCCTTTCGTTGTCCTTCCCCGTCCC-ATTCCCTCCGCTCCCCACTCCGCAGCAGTTCCGCACCGACGCCCT
CGCCCTCACCCTCCCCAAAGCCCTAACCGCTCGCCCGCTCCGCCGCCATGAGGTCCAAGGCCAACGGAGACACCGCGTAA
GTCACCCGCTCCCGCTCCCGCTCCCGCTCCCCCGCCTCCTCTTCCTGCGGGGTTAACGTTCATGGCTTTCGGTCGTACCG
ACTAACTTGGTCTCCTTTTCCGCTGATGATTCCGTGGTGCTGCGC-TGCAGGTTCAAGGCCTCCGGCAAGAACAAGACGG
CCACCGGCGGCGTCGCCAAGCCGAAGCGCGCCCCCACCCCCTTCTTCGCCTTCCTGTAAGCCCTCCCTCCCCGCCTCCTC
CCCCAGATCTATTCGTCTCCGTACTCTAATAATTTTCGAAACTTCGGCCGCAGGGCTGAGTTCAGGCCACAGTACATGGA
GAAGCACCCCGAGGCAAAGGGCGTCGCGGCCGTGAGTCTCCCACCCTCCTGCCA--------------TAGGGTTTTGCT
TTTAGGGTTTTGCATCTAGGGTTTCGTTTCCATTGCCCATGGCTCATAAGTGTGTGCATGTGCTGCTTGTTTT-TCTCTC
CTTTTAGGTCACCAAGGCGGCTGGGGAGAAGTGGCGCAGCATGTCGGATGAGGTTTGTCTGGTTTTTGCGCTACTTATGC
AATTTATA-TTGTGGAAAGTTGCTCCGGTG-CCGTTATACTTGCCACAACTTGCCAAAATACTACT----------AGGT
TGTCGTACCTGTTGCGTTAAACAACTAATTTGCAGTCCGTTGCCCCAAGATGATAACACAGCGAGTCTCCGTTACAATGC
CAGTTTGTTAGAATATGGATGATGTTTATATGATTTTTGCGGTGCTTGTGTAATTAATAATGTTGGTGGATACCTGTCCA
GTGCCGTTATATTTGATGCAACTTACCAAAATAACACCCGAGCTGTGCTCTGTTACCCTTAACTGATAATGCCGTCAGTC
TCCGTTACAATGTTCTGGCGTTCTAAAATATTTCACGCAAGGTTAGCAAAAGGAAAACAGAAATATGTTACCCCTTATCT
GCCACTGTCTTGCTGAGCTGTTTAATAACTTT-AGCGTCTGTTTGGTGAAGGAAAGATGAATTATTTGATCCTAACTGGT
TAATGCATGCCTTGTTTAGGAGAAGGCAAAGTATGGCGGCAAGAAGGCAGATGCCCCAGCAAGCAAGGCGGTGAACAAGA
AGGTAGTGTTATCGCTGCCATGAATCTTGTGACGT-AAAGCTTATGCTACTATGCATTCAAGTAATATCAGTTTTGGGGT
AATAATGTTGTTTTCCATTTTTATCAGGAGAGCACTAGCTCCAAGAAGGCCAAGACTGACGCTGACGAAGAAGGTTCTGA
CGTTGAGGATGATGGCGAGGTATATA-AATTTATGCATCGCTTTAGGTGGCATACATTGCAGTGCTGATGGAATTTACTT
---GTTGCTAACATATGTTTGGCTGTCTTATCACAGGAGGACGAGGAGTAAATAGTAGATGAGGGAACAGCAGTGGTGCA
AATCAGCGTTTGCTGCTTAGGGTTTAGCTTGCCATGTCGATGTCCTCATTATGTAATGTTATGTAAGGAGAATGTTTAGA
TGCGTACTCCTGGGCTGTGGCATGCTAGAGATGTCTCTGTTTGACTATTAGCGAAGAAAAGCTTAAAACCCTTGACTGCT
TTTCTTTCTTGGACTTCCACAGCATGTGGAAACAGTCATTA-------------------------------------TG
TTGGCTTGCTATTAATCGCGTTATGTCTTGTGTTCTCCTTTCACTTTCTTATTGCTTCTGATGGTCCTTTTGCTGAACTT
GCTCTTGAGTTTTGTGCAGCAATTTTTTG-------TTAAGATTGTGCCCAATTGCTTTCTCCTCCGTGGTTGACCAATG
GCTGTCTGTTCT--------------------------------------------------------------------
---------------CACATTTGGCAGCCAGGACATCAGAAGTCTAATTATTTTTTACTTTGACAGGATGTAAAAATCGA
TGCTAGTTGCCGGCTTGCCGCTGGTGGTTGTGTGACT---------ATAGTGCAGCTTCTAAACATGAAGCGTGGTA---
---------------------------------------------ACTTCATCAGATTCAAACATATTAAGTTTGCCCAT
GTATGT--------AAATTTGTGCAATGAAACAATTGATAGTGTAAGGTACCCTCTGTATGCTATCTACAACAAAATCAT
TTTAAGGCGGGGCTACATAATGTTCCACACACGTGAGGTG----------------------------------------
--------------------------------------------------------------------------------
--------------------------AACTTGAACATGGCGGTAACCTGTCAAGAACCTTAGCGAGTGCAAAGAGAAGTG
AAGAAGACTATCTACAGCTGACCCCATGG----TGCAGTTGGCCATCTCGAACAAACATAAAGAAAGGGAGCTTTACAAC
TAGAGGAAAAGGAACTGGATATAGCTGTCATTGCTATGATGAGCTCTTCTCGTTTTTCGTGGTTCGGAGCAGCTCTTTCG
CCATTGACGAGAAGGATTGAGCACCAT
>SNPs
----------------------------S------------------------S--------------------------
-------S-------------------------------S---------------S------------------------
--S-----------S------------------------S------S-S-------------------------------
----------------S----------S----S------------------------------S----------------
-----------------------------------------------------------S---------------S----
------------------S-------------------------------------S-S--SS-S--SSSSSS-SSSSSS
S---------------------S------------S----------S-----------S---------------------
------------------------S----S-----------S-----------------------------S--------
---------S-------------S---------S----------------------------------------------
----------------S---------------------------------------------------------------
--------------------------S--------------------------S----S-------S-------------
--------------------------S---------------SS-S----------------------------------
-----------------------------------------------S---------------------------S----
--------------------------------------------------------------------------------
------S-----------------------------------------S-------------------------------
----S---------------------------------------------------------------------------
-----------------------------------------------------------------S---------S----
----------S--------------------SS---S-------------------------------------------
--------------------------------------------S-----SSSS------------------S-------
-----------------------------------------------------------------------S-S------
---------------------------------------------------------------S----------------
------------------S-----------S-----------------------------------SSSSSSSSSS----
-----S---S----S------S---------S-------------------------------------S----------
---------------S------------------S----S-------------------------S--------------
------------------------------------------------------------------------S-------
--S-----------------------------------S-----------------------------------------
------------------------------SSS-----------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------S--S--------------------------------------------
------------------------------------------------S--------S----------------------
----------------------------------------S--S----------S-------------------------
---------------------S-------------------S--------------------------------------
---------------------------S----------------------------------------------------
------------------------------------S-------------------------------------------
-------------S------------------------------------------------------------------
----S-----------------------------------------SS---------------S----------------
----------------------S------S-----------------S-----------S--------------------
--SS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS------------------SSSS-SSSS-S-SS-S-----S-----S-------------------
---S--------------------------------------------------------------------------SS
S-------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------S-----S---------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS--------------S----------------------S----------------
----------------------S-----------------------------------------------------S---
---------------------------S----------------------------------------------------
---------------------------
>forward_470
--------------------------------------------------------------------------------
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--------------------------------------------------CTGCCACCGAAGTCAAGAGT----------
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---------------------------
>reverse_1747
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CCGGAGTACTAGGT
TGTCGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------
>forward_539
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------GGGGTCAAGCTCCAAGGTAC---------------------
--------------------------------------------------------------------------------
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---------------------------
>reverse_1752
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------GTACTAGGT
TGTCGCACCCG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1127
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------AGACACCGCGTAA
GTCACCT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>reverse_2847
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------ATTGCTTCTCCTGCTGCACT--------------
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---------------------------
