>input_sequence_46890
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----------------------------------------------------ATGTCCGCCGCGGCAGCTATCGCGGCAC
CGCCGCGACACAGCCGGCCGTCGCCTCTCAACCCAAACGCAACGGCGATGGCCAACACCACCAAGCCTAACGCCGTCTGT
ACAAAGACGCACCTCGCCAACCTCGACCGCCTCCTCCTCCGCCCGCCGCCGCTCCCGCTCCCAGTCCGGCCTAAGAAGGC
GCTCGCCGACGAGTCCGGCGGGGGCGACAGGGAGGAGACCGCCCCCGACTCCGACGAACGCAAAGGCCGCCGGGGCGGGC
TCCTCAACGCGCTGAATCTGTCGACGTTCCTGCCGTTCACGGGGAGGCCCGCCACGGACGAGATGTCCCCGCGTAGCCTG
GCACAAATGCAGCGGCTCCTCACGCTCTCGCCGCGGCCCTCGCCCAGGGGCTCCATCGCCGCCGAATGGCGACGTTACCA
CGGCGAGGGCGCGTGGAAGGGCCTGGTCGACCCGCTCGACCAGAACCTACGCCGCGAGGTTTTGCGATACGGCGACTTCG
TGCAGGCCGCATACACGGCGTTCCACTCCATGCCGTCGTCGCCGTCGCACGGCCACGGCCAGCATCGCACGCTCGTGCTA
CCGGACCGGTCGTACCGGCCGACTCGCAGCCTGTTTGCCACGTCTTCCCTGTCCATCCCGCCGTGGGCGCAGCGGCGGTC
GGCGCCCAAGTGGCTGACACAGCGCACAAGCTTCGCCGGCTACGTCGCCGTCTGCGACAACGAGCGCGAGGTTCGGCGCA
TGGGCCGTCGCGACATCGTCATTGTGCTGCGCGGCACCGCCACGTGCCCTGAGTGGGCAGAGAACCTCCGCACCGGCCTC
GTGCCGGTGTCGGACGACGATGACAGCGACGACGCCACGGCGGCGCAGAACGTGCCCAAGGTGGCGAAGGGGTTCCTGAG
CCTGTACAAGACGGCCGGCGACCACGTGCCCAGCCTGTCGGACGCCATTGTGGAGGAGGTGAGGCGGCTGATCGAGGTGT
ACAAGGGCGAGGAGCTCAGCATCACGGTGGTTGGCCACAGCCTCGGCGCATCTTTGGCCCTCCTCGCCGCCGACGAGCTA
AGCGCGTGCCTGGCCGCCGATGCGGCGAGTAACAGCACGGCTGCAGATGATCATCAGCCGCCGCCAATCTCCGTGGTTTC
CTTCGGCGGCCCGAAGACCGGCAACCGCGCGTTCGCGGACCGGCTACAGCACGAGCGGGGCGTGAACGTGCTGCGCGTGG
TGAACGCCGGCGACGTGGTGACGCGCGTCCCCGGGCTCGTGACACCGACGACGATGGCCGAAGGATACGTGCACGCAGGT
GGCGCGGAGCTGACGCTGGACAGCCGCGACTCGCCGTGCCTTCGCCCGGACGCCGGCCCGGCCTGCTGCCACGACCTGGA
GGCCTACCTGCACCTGCTGGACGGGTTCATGGGCTCCGGCCGGCCGTTCCGCGCCGACGCGAGTCGCAGCGTGGCGGGGC
TGCTCATTTACCAGCGGACCAGCGTGAAGCGTGCCTACGTGGAGCGCGCGAGGGTGCTCGGGTTCGAGCCGGCGGCCATG
CCAAGGACCGCCACGGCCAACGGCGCTGGCGCTGCTGATGGACAGTACGGCTTCCTGGCCAGTCCCTCGTGA--------
--------------------------------------------------------------------------------
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------------------------------------
>chr1D_1_TraesCS1D01G220300
GCAAATTTATTATCATTGGGCCACAAAACACAAGTGCATATGAATGAAACGCGTCCTAGAAAAAAAAGTGGTGTTCGGCT
CTGCTGGTATCCCCAGAGAAAGAACATCCGTGCTGTAACTGACACGTGCACCATGAGTTGAC------GCATCATTCCCT
TGTGTGAACAGTTGAGCCAGGTTCACTGAATTGCGGCCTGGCCGGTGGAAGCAGCTTATTTCTGCACGTGCGCCAACTAG
TGCTTCGTACTACTACGTACTAATAGTGCTGAACTACTGAGTACTGAT--------------------------------
-------------------------------------------GTAGAGTGCAATCTTTCTCGAAAAATAAAA-GATGTA
CAGTGCAATCTTTA----ACCGAACTGTTAGAAGAAAACGGAGAAGAATAATGATGACACTTCG-TTTAGAGTATAGACT
AAGACTCTTACTTAGATTTCAGTGGTGCAAGACATCTACTTAGACATGTGTTAGAAAATTAAATCAAGAATTCAGGATCA
GAGCAAGTAGAAAGGGCCGACAAGAGATCCACCCCCATTTAGTTTTGCCTCACGCCTTTTATTAGTAATGGAATTTTGGG
AACCACAATTGATTTCATTTTTT-G-ATAGCTTACCAAATTGACCGCTTGGTGTAGGAACTGTAATTGATTTTGTTTTAA
AATAGTAACTGTAATTGACTCT-TTTTTCACACTGTATAAACGTAAATGCTCACACCCACTCAATTTTATGAGTGCATGC
ATGCACATTTTACCTCTATGAGCACAAATTTCATCACAAAGAATCTAATCATCTGAACTACGCTTAGTTCGCAACTGCAA
TTGATTTTGGTAACCTGATTCAGACCTATAAGAAAGCACAACGCGTGACGACTACACGTGATGCACATTTTGCGCGCGCC
CC-TGCCTAGCTATAAACCACCGCACTTGCACTTGCCATGCTTGTGCACACGCTAGCGATCGCCACCTTCGAACCACTCC
ACGTCGACGAATTTG-CGCACCGCGCCCGCGCGCTTTTTTGCTTTTCCAGCCATGTCCGCCGCGGCAGCTATCGCGGCAC
CGCCGCGACACAGCCGGCCGTCGCCTCTCAACCCAAACGCAACGGCGATGGCCAACACCACCAAGCCTAACGCCGTCTGT
ACAAAGACGCACCTCGCCAACCTCGACCGCCTCCTCCTCCGCCCGCCGCCGCTCCCGCTCCCAGTCCGGCCTAAGAAGGC
GCTCGCCGACGAGTCCGGCGGGGGCGACAGGGAGGAGACCGCCCCCGACTCCGACGAACGCAAAGGCCGCCGGGGCGGGC
TCCTCAACGCGCTGAATCTGTCGACGTTCCTGCCGTTCACGGGGAGGCCCGCCACGGACGAGATGTCCCCGCGTAGCCTG
GCACAAATGCAGCGGCTCCTCACGCTCTCGCCGCGGCCCTCGCCCAGGGGCTCCATCGCCGCCGAATGGCGACGTTACCA
CGGCGAGGGCGCGTGGAAGGGCCTGGTCGACCCGCTCGACCAGAACCTACGCCGCGAGGTTTTGCGATACGGCGACTTCG
TGCAGGCCGCATACACGGCGTTCCACTCCATGCCGTCGTCGCCGTCGCACGGCCACGGCCAGCATCGCACGCTCGTGCTA
CCGGACCGGTCGTACCGGCCGACTCGCAGCCTGTTTGCCACGTCTTCCCTGTCCATCCCGCCGTGGGCGCAGCGGCGGTC
GGCGCCCAAGTGGCTGACACAGCGCACAAGCTTCGCCGGCTACGTCGCCGTCTGCGACAACGAGCGCGAGGTTCGGCGCA
TGGGCCGTCGCGACATCGTCATTGTGCTGCGCGGCACCGCCACGTGCCCTGAGTGGGCAGAGAACCTCCGCACCGGCCTC
GTGCCGGTGTCGGACGACGATGACAGCGACGACGCCACGGCGGCGCAGAACGTGCCCAAGGTGGCGAAGGGGTTCCTGAG
CCTGTACAAGACGGCCGGCGACCACGTGCCCAGCCTGTCGGACGCCATTGTGGAGGAGGTGAGGCGGCTGATCGAGGTGT
ACAAGGGCGAGGAGCTCAGCATCACGGTGGTTGGCCACAGCCTCGGCGCATCTTTGGCCCTCCTCGCCGCCGACGAGCTA
AGCGCGTGCCTGGCCGCCGATGCGGCGAGTAACAGCACGGCTGCAGATGATCATCAGCCGCCGCCAATCTCCGTGGTTTC
CTTCGGCGGCCCGAAGACCGGCAACCGCGCGTTCGCGGACCGGCTACAGCACGAGCGGGGCGTGAACGTGCTGCGCGTGG
TGAACGCCGGCGACGTGGTGACGCGCGTCCCCGGGCTCGTGACACCGACGACGATGGCCGAAGGATACGTGCACGCAGGT
GGCGCGGAGCTGACGCTGGACAGCCGCGACTCGCCGTGCCTTCGCCCGGACGCCGGCCCGGCCTGCTGCCACGACCTGGA
GGCCTACCTGCACCTGCTGGACGGGTTCATGGGCTCCGGCCGGCCGTTCCGCGCCGACGCGAGTCGCAGCGTGGCGGGGC
TGCTCATTTACCAGCGGACCAGCGTGAAGCGTGCCTACGTGGAGCGCGCGAGGGTGCTCGGGTTCGAGCCGGCGGCCATG
CCAAGGACCGCCACGGCCAACGGCGCTGGCGCTGCTGATGGACAGTACGGCTTCCTGGCCAGTCCCTCGTGACGTTGATC
AATCGCATGCATGTAGTGTACTCTGGGTATCTGCAGTGCACGTGTCTTGACGTGCAAACTTGTGTACTGGACGAGAGAGG
CATATGTCTCTCCCCGTATCATGCAGCATGCTCGTTCGACATGAACAATCTATTTCGTGTTGTTTTGTTCAGAAGAATCT
TGTA--CTTAGTAAATTTGGTACACGTATATCACCCTATAATATTCGGCTTAAGTAGGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TTGATAGCGCCATCATATCAATAAGGATTTTCTTCT--------------------------------
-----TTTTCGAAAGACCATACGCAAAGAACCTCAAAATTAACTGAAAAAGTGTGAAAAAAAGTTTAGCGTTGATATGAG
AGGACAGTTTAGATGTGAGGTGTAGCGGGTTCATATCCGGTAGC-------CCGTCCGGAGGCATTACAACCGTGGAGTA
ACTCGCTTTGGGCATCTACAACAGTATAATAATAGAAGGAAAATTATGTGGCATGCATTGTGCACTAATACCCAACAGTC
AGTTGCGAACCAACGT-AGGGCAAAACCATGCCATGGCCCGTCCAGCTCAGAACGAAGACAATGCAAAGTATGAGCATGA
CTAGGCCATTTTAAAAAAA---GGTGTTATTCTTTAGATTGGCCCGCTCTGCTCTTAGTCTGTAGCTCCGCAACTGCCAG
CAGCGCGACGTGTCGCTAGCCATCTGATCCAGTGGGCGCTGGACAAGGGCTGGCTCGACGCTATGGAAAGTGGATTAACC
AGTCGGCTGATGATGTGTCACATGTTCGTCCGGTTGCACAAATGCTCATGTCGGATCAGGGTGCTAATAGAATTAGAGGT
GCAAAATAGAAATTTTTAACATGGACCGTTTGATCTCGGATGGGTATGCCAAATTCATGCATGCGAGCTACCGGGGAGCT
TTGGTCATTT-CTCGGAAAATCCATGGCTAACACCTATATTAAAAGTCTGTCTTTCCACCATCTACCACACGACAAATTT
AGGCCGTGCACTAGAGATACAATGCTTATGTTATAT
>chr1A_3
--AAATTTATTATCATTGGGCCACAAAACACAAGTGCATATGAACGAAACGCGTCCTAG-AAAAAAAGTGGTGTCCGGCT
CTGCTGGTATCCCCAGAGAAAGAACATCCGTGCTGTAACTGACACGTGCACCATGAGTTTGAGTTGATGCATCATCCCTT
TGTGTGAACAGTTCAGTCAGGTTCACTGAATTGCGGCCTGGCCGGTGGAAGCAGCTTATTTCTGCACGTGCGCCAACTAG
TGCTTCGTACTACTACGTACTAATAGCGCTGAACTACTG-----------------------------------------
-----------------------------------------------------ATCTTTCTCGAAAAATAAAAAGATGTA
CATTACGATCTTTA----ACCGAACTGTTAGAAGAAAACGGAGAAGAATAATGATGACACTTCGTTTTAGAGTATAGACT
AAGACTCTTACTTAGATTTCAGTCGTGCAAGACATCTACTTAGACATGTGTTAGAAAATCAAATCAAGAATTCAGGATCA
GAGCAAGTAGAAAGGGCCGACAAGAGATCCACCCCCATTTAGTTTTGCCTCACGCCTTTTATTAGTAATGGAATTTTGGG
AACCACAATTGATTTCATATTTTTG-ATAGCTTAGCAAGTTGACCGCTTGGTGTAGGAACTGTAATTGATTTCGTTTTAG
AATAATAACCGTAATTCACTTT-TTTTTCACGCTGTATAAATCCAAATACTCGCATGCAATCAATTCTATAAATGCATGC
ACGCACATTTTACCTCTATGAGCATATGTTTCACCACAAAGAATCTAGTCATCTGAACTACGCTTAGTTCAGAACTGCAC
TTGATTTTGGTAACCTGATTCAGACCCAAAAGAAAGCACAACGCGTGACGACTACACGTGATGCACATTTTGCGCGCGCC
CCTTGCCTAGCTATAAACCACCGCACTTGCACTTGACATGCTTGTGCACACGCTAGCGATTGCCACCTTCGAACCACTCC
ACGTCGACGAATTTGGCGCACCGCGCCCGCGCGCTTTTTTGCTTTTCCGGCCATGTCCGCCGCGGCAGCTATCGCGGCAC
CTCCGCGCCACAGCCGGCCGTCGCCTCTCAACCCAAACGCAACGGCGATGGCCATCACCACCAAGCCTAACGCCGTCTGT
ACAAAGACGCACCTCGCCAACCTCGACCGCCTCCTCCTCCGCCCGCCGCCGCTCCCGCTCCCAGTCCGGCCTAAGAAGGC
GCTCGCCGACGAGCCCGGCGGGGGCGACAGGGAGGAGACCACCACCGACTCCGACGAACGCAAAGGCCGCCGGGGCGGTC
TCCTCAACGCGCTGAACCTGTCCACGTTCCTGCCGTTCACAGGGAGGCCCGCCACGGACGAGATGTCCCCGCGTAGCCTG
GCACAAATGCAGCGGCTCCTCACGCTCTCGCCGCGGCCCTCGCCCAGGGGCTCCATCGCCGCCGAATGGCGACGTTACCA
CGGTGAGGGCGCGTGGAAGGGCCTGGTCGACCCGCTCGACCAGAACCTCCGCCGCGAGGTTTTGCGATACGGCGACTTCG
TGCAGGCCGCCTACACGGCGTTCCACTCCATGCCGTCGTCGCCGTCGCACGGCCGCGGCCAGCATCGCGCGCTCGTGCTA
CCGGACCGGTCGTACCGGCCGACGCGCAGCCTGTTTGCCACGTCTTCCTTGACAATCCCGCCGTGGGTGCAGCGGCGGTC
AGCGCCCAAGTGGCTGACACAGCGTACCAGCTTCGCCGGCTACGTCGCCGTCTGCGACAACGAGCGCGAGGTTCGGCGCA
TGGGCCGTCGCGACATCGTCATTGTGCTGCGCGGCACCGCCACGTGCCCTGAGTGGGCAGAGAACCTCCGCACCGTCCTC
GTGCCAGTGTCGGACGACGATGACGGCGACGACGCCACGGCGGCGCAGAACGTGCCCAAGGTGGCGAAGGGGTTCCTCAG
CCTGTACAAGACGGCCGGCGACCACGTGCCCAGCCTGTCGGACGCCATTGTGGAGGAGGTGAGGCGGCTGATCGAGGTGT
ACAAGGGCGAGGAGCTCAGCATCACGGTGGTTGGCCACAGCCTCGGCGCATCTTTGGCCCTCCTCGCCGCCGACGAGCTA
AGCGCGTGCCTGGCCGCTGATGCGGCGAGTAACAGCACCGCTGCAGATGATCATCAGCCGCCGCCCGTCTCCGTGGTTTC
CTTCGGCGGCCCGAAGACAGGCAACCGCGCGTTCGCGGACCGGCTACAGCACGAGCGGGGCGTGAACGTGCTGCGCGTGG
TGAACGCCGGCGACGTGGTGACGCGCGTCCCCGGGCTCGTGAAACCGACGACGATGGCCGAAGGATACGTGCACGCGGGT
GGCGCGGAGCTGACGCTGGACAGCCGCGACTCGCCGTGCCTGCGCCCGGACGCCGGCCCGGCCTGCTGCCACGACCTGGA
GGCCTACCTGCACCTGCTGGACGGGTTCATGGGCTCCGGCCGGCCGTTCCGCGCCGACGCGAGTCGCAGCGTGGCGGGGC
TACTGGTTTACCAGCGGACCAGCGTGAAGCGTGCCTACGTGGAGCGCGCGAGGGTGCTCGGGTTCGAGCCGGCGGCCATG
CCAAGGGCCGCCACGGCCAACGGCGCTGGCACTGCTGATGGACAGTACGGCTTCTTGGCCAGTCCCTCGTGACGTTGATC
AGTCGCATGCATGTAGTGTACTCTGGGTATCTGCAGTGCACGTGTCCTGACGTGCAAACTTGTGTACTGGACGAGAGAGG
CATATGTCTCTCCCCGTATCATGCAGCATGCTCGTTCGACATGAACAATCTATTTCGTGTTGTTTTGTTCAGAAGAATCT
AGCA--CTTGGTAAATTTGTTACACGTATATCATCCTATAATATTCGGCTTAA-TAGGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TTGATAGT--CATCATATCAATATAGATTTTCTTCT--------------------------------
-----TTTTCAGAAGACTTTACGCAAGGAACCTCAAAGTTAACCGTAAAGTGTGAAAACAGACTAGT--GTTGATATAAG
GGGACAATTTAGATGTGAGGTGTTGCGGCCTT-------GTACC-------CCGCCCGGAGGCATTACAACCATGAAGTA
ATACACTTTGGGCATCTGCAATAATACAATAATAAAATGAAAATTATGTGGGGTGCATTGTGCGCTGATAGCCAAGAGCC
AGTGGCAAAGCTACGTAAGGGCAAAATTGTGCCATGGCCGGCCCAACTCAGAACAAAGACAATGCAAAGTATAAGCCTCA
CTAAGCCATTTCAAAAAAAATGGGTGATATTCTTTAGACTGGCTCTCTCTGCTCTTAGTTTGTAGCTCCACCACTGCCAG
CAAGGCGACGTGTCAATGGCCATCTAATCCAGTGGGCACTGGACAAGGGTTGCCTCGACGCTATGCATGGTGGATTAACG
AATTGGCTGATGATGTGTCGTACGTTCGTCTGGTTGCATAAATGCTCATGTCGGGTCATGGTGCTAATAGAATTGGAGGT
GCAAAGTATAAATTTTTAACATGGACCGTCTGATCTCGGATGGATGTGCCAAATTCACGCATGGGAGCTACCGGGGAGCT
TTGGTCATTT--TCGGAAACCCCCTGGCTAACACCCATATTAAAAGTCGGTCTTTCCACCATCTACCACACATCAAATTG
GGGCCGTGCACTAGAGATACAATGCT----------
>chr1B_3
--AAATTTATTATCATTGGGCCACAAAGTACAAGTGCATATGAATGAAACGCGTCCTAG-AAAAAAAGTGGTGTCCGGCT
CTGCTTGTATCTCCAGAGAAAGAACATCCGTGCTCTACCTGACACGTGCACCATGAGTTTGAGTTGATGCATCATTCCCT
TGTGTGAACAGTTCAGTCAGGTTCACTGAATTGCGGCCTGGCCGGTGGAAGCAGCTTATTTCTGCACGTGCGCCAGCTAG
TGCTTCGTACTAGAACGTACTAATAGTGCTGAACTACTGATGTACTCCCTCCGTAAACTAATATAAGAGCGTTTAGATTA
CTACTTTAATAATCTAAACGCCTTATATTAGTTTACAGAGGAAGTAGAGTGCAATCTTTTTCGCAAAATAAAA-GATGTA
CAGTGCACCTTTTTTTTGACCGACCTGTAAGAAGAAAAAGGAGAAGAATAACGATGCCACTTCGTTTTAGAGTATAGACT
AAGACTCTTACTTGGATTTCAGTCATGCAAGACATCTGCTTAGACTTGTGTTAGAAAATTAAATCAAGAATTCATGATCA
GAGCAAGTAGAAAGGGCCGACAAAAGATCGACCCCCATTTAGTTTTGCCTCACGCCTTTTATTAGTAATGGAATTTTG--
---CACAATTGATTTCTTTTTTTTTTATATCTTACCAAGTTGACCGCCTGGTGTAGGAACT-TAATTGATTTTGTTTTAG
AATATTAACTGTAATTGACTTTTTTTTTCACACTGTATAAAAGCAAATCCTCAAATATATTCAATTCTATGAGCGCATGC
ACGCACATTTTACCTCCATGAACACAAATTTCACCACAAAGAATCTAATCATCTGAACTGTGCTCAATTCACAACTGCAC
TTGATTTCGGTAACCTGATTCAGACCCGAAAGAAAGCACAACGCGTGACGACTACACGTGATGCACATTTTGCGCGCGCC
---TGCCTAGCTATAAACTACCGCACTTGCACTTGCCATGCTTGTGCACACGCTAGCGATCGCCACCTTCGAACCACTCC
ACGTCGACGAATTTGGCGCACCGAGCCCGCGCGCTTTTCTGCTTTTCCGGCCATGTCCGCCGCGGCAGCTATCGCGGCAC
CGCCGCGACACAGCCGGCCGTCGCCTCTCAACCCAAATGCAACGGCGATGGCCAGCACCACCAAACCTAACGCCGTCTGT
ACAAAGACGCACCTCGCCAACCTCGATCGCATCCTCCTCCGCCCGCCGCCGCTCCCGCTCCCGGTCAGGCCTAAGAAGGC
GCTCGCCGACGAGTCCGGCGGGGGCGACAGGGAGGAGACCGCCCCCGACTCCGACGAACGCAGAGGCCGCCGGGGCGGTC
TCCTCAACGCGCTGAACCTGTCGACGTTCCTGCCGTTCACAGGGAGGCCCGCCACGGACGAGATGTCCCCGCGTAGCCTG
GCACAAATGCAGCGGCTCCTCACGCTCTCGCCGCGGCCCTCGCCCAGGGGAACCATCGCCGCCGAATGGCGACGTTACCA
CGGCGAGGGCGCGTGGAAGGGCCTGGTCGACCCGCTCGACCAGAACCTCCGCCGCGAGGTTTTGCGATACGGTGACTTCG
TGCAGGCCGCATACACGGCGTTCCACTCCATGCCGTCGTCGCCGTCGCACGGCCACGGCCAGCATCGCACGCTCGTGCTA
CCGGACCGGTCGTACCGGCCGACTCGCAGCCTGTTTGCCACGTCTTCCTTGTCAATCCCGCCGTGGGCGCAGCGGCGGTC
GGCGCCCAAGTGGCTGACACAGCGCACCAGCTTCGCCGGCTACGTCGCCGTCTGCGACAACGAGCGCGAGGTTCGGCGCA
TGGGCCGTCGCGACATCGTCATTGTGCTGCGCGGCACCGCCACGTGCCCTGAGTGGGCAGAGAACCTCCGCACCGGCCTC
GTGCCGGTGTCGGACGACGATGACAGCGACGACGCGACGGCGGCGCAGAACGTGCCCAAGGTGGCGAAGGGGTTCCTGAG
CCTGTACAAGACGGCCGGCGACCACGTGCCCAGCCTGTCGGACGCCATTGTGGAGGAGGTGAGGAGGCTGATCGAGGTGT
ACAAGGGCGAGGAGCTCAGCATCACGGTGGTTGGCCACAGCCTCGGCGCATCTTTGGCCCTCCTCGCCGCCGACGAGCTA
AGCGCGTGCCTGGCCGCCGATGCGGCGAGTAACAGCACCGCTGCAGATGATCATCAGCCGCCGCCCGTCTCCGTGGTTTC
CTTCGGCGGCCCGAAGACCGGCAACCGCGCGTTCGCGGACCGGCTACAGCACGAGCGGGGCGTGAACGTGCTGCGCGTGG
TGAACGCCGGCGACGTGGTGACGCGCGTCCCCGGGCTCGTGACACCGACGACGATGGCCGAAGGATACGTGCACGCGGGT
GGCGCGGAGCTGACGCTGGACAGCCGCGACTCGCCGTGCCTGCGCCCGGACGCCGGCCCGGCCTGCTGCCACGACCTGGA
GGCCTACCTGCACCTGCTGGACGGGTTCATGGGCTCCGGCAGGCCGTTCCGGGCCGACGCGAGTCGCAGCGTGGCGGGGC
TGCTCGTTTACCAGCGGACCAGCGTGAAGCGTGCCTACGTGGAGCGCGCGAGGGTGCTCGGGTTCGAGCCGGCGGCCATG
CCAAGGACCGCCACGGCCAACGGCGCTGGCGCTGCTGATGGACAGTACGGCTTCCTGGCCAGTCCCTCGTGACGTTGATC
GATCGCATGCATGTA-TGTACTCTGGGTATCTGCAGTGCACGTGTCTTGACGTGCAAACTTGTGTACTGGACGAGAGAGG
CATCTGTCTCTCCCCGTATCATGCAGCATGCTCGTTGGACATGAACAATCTATTTCGTGTTGTTTTGTTCAGAAGAATCT
TGTATACTTAGTAAAATTGTTACACGTATATCACCCTATAATATTCGACTTAA-TATGATTGATAGAGTATTTTTCTTGA
ATACACACGAGTGTGTGTATCATTCATTATAGAAGGAGGAGAGAAGATTCCTGAAACTCCACAGTTTTACAGTTATATTA
CAAGCACGTGTATGCCCACCACCACCATACACCCCTAGCGTGACTACTCCCTATCTACCCACCCATCCACAACAAAGCCT
TCATCGTTGCCTTTAATTAGCACTGCCGATCTCCATAGCTTATCCTCTTCCTCATTGCGCTGCGTGATCCTCGCAAAGGA
TGGAGATTTTGCATTGAAGACAATGTAGTTCCGATGCTTCCATAACATCCACATGCCGAGAAGACATTTCGCTCTTGTCG
ATCGTTGGTGATCACACCTCTGGTCATGTCTAATGCACCACTCGCCCAAGGTTACATTGTCACGGGTCTCAAACTTCGGT
CTACCGGTGACGACACTAAAGCAGTGCCAAACTTGCTTTGCAAAAACGCAATCACTCATAAGATGATTCATGGTTTTCTT
TCCCGCAAAAACTTGATAGT--CATCATATCAATAAGGATTTTCTCGCAAAATAATAATAATAATAATAATGAGGATTTT
CTTTCTTTTCAGAGGACCGTACGCAAGGAACCGCGAAGTGTAAAAG----------AAGAGAATATT--GTTGAT----G
GGGACACTTTAGATGTGAGGTGTAGGGGCCTT-------ATACCTGGTAGCCCGTCCGGGGACATTACAACTGTGGAGTA
ACTCGCTTTGGGCATCTACAATAGT------------------------------------GCGCTGAAACACAACAGCC
AGTGGCGAAGCTACGT-AGAGCAAAACTGTGCCATGGCCCGCCCAGCTTAGAATGAAGACAAGGCAAAGTATGAGCGCGA
CTAGGCCATTTCAAAAAAA---GGTGATATTCTTTAGATTGGCCCGCTTTGGTCTTAGTTTGTAGCTCCGCCACTGCCAG
TAGCGCGACGTGTCACTGGCCGTCTGATCCAGTGGGTGTTGGACAAGGGGTGGCTCGACGCTATGTACGGTGGATTAACC
AGTCAGTTGATGATGTGTTGCAGGTTCGTCTGGTTGCATGAATGTTCATGCCAGATCAGGGTGCTAATAGAATTAGAGGT
GCGAAATATTTTC-TTTAACATGGACCATCTGATCTTGGATGGATGTGCCGAATTCATGCATAGGAGCTAGGGGGGAGCT
TTGGTCATTTTCTCGGAAAACCCCTGGCTAACACCTATATT-AAAGTCGGTCTTTCCACCATCTACCACATGGAAAATTT
GGGCCGTACACTAGAGATACAATGCTTAGGTTATAT
>SNPs
SS---------------------------------------------------------S--------------S-----
-----------------------------------------------------------SSS------------------
-------------S--S---------------------------------------------------------------
----------------------------------------SSSSSSSS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S----------------------------------------S
----S---------------S--------------------S-S----S------SS--S------S-------------
-S-------------------------------S------------------------------------S--------S
--------------------------S-S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------S-----------------------S---------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S----S--------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------------------------SS-------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S---------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------SSS----------------------------------------------------------
----------SS------S-------S----------S-----S-S---SSSSSS---S-S-S-S-SSS--------S--
S-----S---------------------SS-SSSSSSSS---S-------------------------------------
---------------------S----S-------S--S-------------SS----------S--S-----------S-
---S-----S-S---------------SS------------S----------------------------------S---
-----------S--------------S--------------------------------S-----------S--------
--------------S--S-------------------------------S---------------S-SS-----------
-------------------S--S-------S-------S-----------------------------------------
--------S--------------------S-------------S-S-----------------S----------------
--------------------S--S------------------------S-----------------------S-------
S---------------------------S-------
>forward_141
--------------------------------------------------------------------------------
-----------------------------------------ACACGTGCACCATGAGTTGA-------------------
--------------------------------------------------------------------------------
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>reverse_1175
--------------------------------------------------------------------------------
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------------------------------------------------------ACACCACCAAGCCTAACGC-------
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>forward_880
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------------------------------------------------------------CGCTTAGTTCGCAACTGCAA
--------------------------------------------------------------------------------
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------------------------------------
>reverse_2566
--------------------------------------------------------------------------------
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-----ATTTACCAGCGGACCAGCG--------------------------------------------------------
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------------------------------------
>forward_1729
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-----------------------------CCTGTTTGCCACGTCTTCCC-------------------------------
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------------------------------------
>reverse_3772
--------------------------------------------------------------------------------
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-----------AACGTAGGGCAAAACCATGC-------------------------------------------------
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------------------------------------
