>input_sequence_46837
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--------------------------------------ATG-GCTGCTGCTCCGGCGACGACGGCGGTGGT---GGTGCC
GCGGATGAAGCTGGGCTCGCAGGGGCTGGAGGTGTCGGCGCTGGGGCTTGGCTGCATGGGCATGTCCGCCTACTACGGGC
CGCCCAAGCCCGAGCCCGACATGGTCGCGCTCATCCACCACGCCGTCGCCGCCGGCGTCACCCTCCTCGACACCTCCGAC
ATCTACGGCCCGCACACCAACGAGCTCCTCCTCGGCAAGGCGCTGCAGGGAGGGGTGAGGGGCAAGGTGCAGCTGGCGAC
CAAGTTCGGCATCCTCGCTGGCGCCGACGGCGCGCGGGCGATCCGCGGCGACCCGGCGTACGTGCGCGCGGCGTGCGAGG
GAAGCCTCGAGCGCCTCGGCGTAGAATGCATCGACCTCTACTACCAGCACCGCGTCGACGTCAGCGTGCCCATCGAGGTC
ACGGTGAGTGAGTCAACCTCAGTTCAACCC--------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TATCCCGTTGAGTAGTCAAA
CCAACGCGCGTTGACCAAATGCACCAAACTGAGACCCGACGGTGGAAAAGTCAAATCTCGTAAATTTTAATCAAGTTTAT
GGAGAAAATCATTTACATCTGGAATGTCAAACACATTAGATTCGTCATAAGATACAGTTTCATATTCCATATATTTAGTA
TTGTAGATATAAATAGTTTTCTCTACAAATTTGGTTAAACTTTATACTCTTCG-AAAAATCTATACACACTACATTATGG
AACAGAGAAAGTAC----AACACTATCCATGAGAGAAATTTACACACTTGCCATCCATAGATGGGT-GAACTCAAGAAAC
TGGTTGAAGAGGGGAAGATAAACTACATTGGGTTGTCCGAAGCATCGGCGTCGACTATCCGAAGAGCGCACGCGGTTCAT
CCCATAACCGCCGTCCAGCTAGAGTGGTCGTTGTGGTCGAGAGATGTCGAGAAAGACATAATCCC--TACTTGCAGGTAC
GTACATTTTCATGCACAATCATGACATCTCAAGATCATTTTTGGTTTCCCAACCGTATGAATTTTGTTCCTGCTC----A
TAATCTCAGGGAACTTGGCATTGGAATTGTGGCGTACAGCCCGTTGGGCAGAGGGTTCTTCTCTAGTGGGCCAAAGCTGG
TCGACACGCTGTCTGAACAAGACTTTCGCAAGGTTTGTTA--TAAGCATGTCTGCCTACTTCGCTCTCTCGTGTATTTGA
GAGACCCTTCTCTTTGTACAAGAAATCTTGATTTTGAGACTATTACTTCTATTCTAAGTTTCTAAGCCAACAATGCTTAA
CACATTTATTCAGGACTTACCAAGATTCCAAGCTGAAAACCTTGAGAAGAACACCATGGTATTTGAGCGGGTTAGCACGA
TGGCGGCGAGGAAGGGGTGCACGGCGTCGCAGCTTGCACTTGCCTGGGTTCACCATCAGGGGAATGATGTGTGCCCCATA
CCAGGAACCACAAAGGTCGACAACTTCAACCAGAATGTGGCGGCGCTGTCCGTGAAGCTCGCCCCAGAGGAGATGGCCGA
GCTTGAGTCCTACGCGTCGGCGGATGTTGCGGGTGATCGCTACCATGATTTCCTGAACACTTGGAAGGATTCTGAGACCC
CTCCCATGTCATCCTGGAAGGCCGAGTGA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr5D_1_TraesCS5D01G336900
AGGCCGAGGCGCCTATGCATGTTCTATACTTGATTCCCTGTTTAAGGTTTGGGAATTCTGAAATA--CCAGGGGCGAATG
TTTTCTGTTGCC-TGTAATTGGACGTTGGACGAGATGATATGGATTCAGATTCAGTGCCTTGCGTGACCTTGTCAAAGGC
TGACGACTGTACGGTGAGATAACCAAAGCCGTAGACCCAGCCTCGGCAGTTCAGCATGTAAAAGGCAACAGAGTTGCATA
--TTTACTCCTGGAATCAAAATGCAACCCCACAACAAC-AAAGAAGTATGCCCAGTGTATTATAGCAAATCAGTACTAGG
GAGTACAAGCGATGACTTGGAGAAACATAAGACGTTGCAGAAACGCTCTAAACTTGGTGACATCTTTTGTGATAAAACGC
TCTAAACTTGGCGACATCTTTTATGATATCGTACGTACATCGACGGTGAATCATATGATGAGAGCTAAAGAATCTGCACA
CTAGGATCAACATCCGTCCTCATAAAACAGAAGCAAGCAAGGAAGAAAAAATGCTGACCTGTGAAAGCGACTTGGTGGTC
ATTGCAAAAAATAT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TAATAACAAGACGGCTTTGGTGGAGCTGGAAGATAATGCTACCTGCTAATGATGCCCATTAGTCACCAACCCCACTTT
CCTCTATATTGAATCCCCAATCAGGAGAACTGGATGAACAGATATTGATAGAAACACTTGAACTTCTCCGTATCTTTTGC
AATGTTGTATATATTGTATGCACGATGGGGAGCGAACAATCCGGAGCCGCCATTATTAAAGTTGCAGAGCAACAACCTGC
GGCACAAATAGTTAAGACACGACGGTGCTTAGCAGCCGCAGCGTGACCTAACCCCTGACGCCACAGTGCCCTGCTAGCAC
----TATAAATTAAGGTGGAAGGTGTAATCTTCCCCAGTTCACTCAACAATCTAATCCAGTACAGTGGCTGAGCACTCGA
GTGCAGAGCCGATTAGCCTTCCGGTTCCGGAACCTGCAATG-GCTGCTGCTCCGGCGACGACGGCGGTGGT---GGTGCC
GCGGATGAAGCTGGGCTCGCAGGGGCTGGAGGTGTCGGCGCTGGGGCTTGGCTGCATGGGCATGTCCGCCTACTACGGGC
CGCCCAAGCCCGAGCCCGACATGGTCGCGCTCATCCACCACGCCGTCGCCGCCGGCGTCACCCTCCTCGACACCTCCGAC
ATCTACGGCCCGCACACCAACGAGCTCCTCCTCGGCAAGGCGCTGCAGGGAGGGGTGAGGGGCAAGGTGCAGCTGGCGAC
CAAGTTCGGCATCCTCGCTGGCGCCGACGGCGCGCGGGCGATCCGCGGCGACCCGGCGTACGTGCGCGCGGCGTGCGAGG
GAAGCCTCGAGCGCCTCGGCGTAGAATGCATCGACCTCTACTACCAGCACCGCGTCGACGTCAGCGTGCCCATCGAGGTC
ACGGTGAGTGAGTCAACCTCAGTTCAACCC--------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TATCCCGTTGAGTAGTCAAA
CCAACGCGCGTTGACCAAATGCACCAAACTGAGACCCGACGGTGGAAAAGTCAAATCTCGTAAATTTTAATCAAGTTTAT
GGAGAAAATCATTTACATCTGGAATGTCAAACACATTAGATTCGTCATAAGATACAGTTTCATATTCCATATATTTAGTA
TTGTAGATATAAATAGTTTTCTCTACAAATTTGGTTAAACTTTATACTCTTCG-AAAAATCTATACACACTACATTATGG
AACAGAGAAAGTAC----AACACTATCCATGAGAGAAATTTACACACTTGCCATCCATAGATGGGT-GAACTCAAGAAAC
TGGTTGAAGAGGGGAAGATAAACTACATTGGGTTGTCCGAAGCATCGGCGTCGACTATCCGAAGAGCGCACGCGGTTCAT
CCCATAACCGCCGTCCAGCTAGAGTGGTCGTTGTGGTCGAGAGATGTCGAGAAAGACATAATCCC--TACTTGCAGGTAC
GTACATTTTCATGCACAATCATGACATCTCAAGATCATTTTTGGTTTCCCAACCGTATGAATTTTGTTCCTGCTC----A
TAATCTCAGGGAACTTGGCATTGGAATTGTGGCGTACAGCCCGTTGGGCAGAGGGTTCTTCTCTAGTGGGCCAAAGCTGG
TCGACACGCTGTCTGAACAAGACTTTCGCAAGGTTTGTTA--TAAGCATGTCTGCCTACTTCGCTCTCTCGTGTATTTGA
GAGACCCTTCTCTTTGTACAAGAAATCTTGATTTTGAGACTATTACTTCTATTCTAAGTTTCTAAGCCAACAATGCTTAA
CACATTTATTCAGGACTTACCAAGATTCCAAGCTGAAAACCTTGAGAAGAACACCATGGTATTTGAGCGGGTTAGCACGA
TGGCGGCGAGGAAGGGGTGCACGGCGTCGCAGCTTGCACTTGCCTGGGTTCACCATCAGGGGAATGATGTGTGCCCCATA
CCAGGAACCACAAAGGTCGACAACTTCAACCAGAATGTGGCGGCGCTGTCCGTGAAGCTCGCCCCAGAGGAGATGGCCGA
GCTTGAGTCCTACGCGTCGGCGGATGTTGCGGGTGATCGCTACCATGATTTCCTGAACACTTGGAAGGATTCTGAGACCC
CTCCCATGTCATCCTGGAAGGCCGAGTGACAACTTTCCGTGGGAACTGGAATAAAAGAGTTGC--TTGTTTCTTAATTTC
TCGTGCCAATGGAAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GTGTTGGCTT
GATTACTCATGTTGTATCCCGAGAAGTACTGTGATCCGGTGTAGGAATGGACTCTGGAAATAATGTACGGAGTACCATGT
GTTGTGGTCGTGAGTAAG----TTACGTCCATCTGTTAAAAAGGGCCCAGGGACAACGGCGAGGCAAGTCCGAATGCAAA
ATAACTCCCAACACATATGGCTCCTTTATCCGAACCATCCAGTTGCTCCGAGATTGTTGAATATATTGGTATTTTTGCTT
GTATTCTCTCATCCACTTCACCTTTTTTTCAAGGACACACCATGGAGAGATGTACCAGTAACATAGAAGAAGAGTGAAGA
TGGTTGATACAACTGATAC-AATGCCCAAGAGCACGCCACACCCACCGCAATT----------ACAACGACACACAACTC
ATCTTGTCCAACTCAAGCCATGAAGAGGCATGATGCCAAACACCTCGGAAGCATGAACAAAACTCCATGCCCGACTGACT
CAATGCACCCTTCACGCTTGGCGCCTAGGAGATCGACAGATGGACACTAAGAAACAATCGGACTTGAGGAAGATGTCGTC
CAAGAGGTACCGGCGACGAGGATGCAGATAACA-CCCGAAGGCC------------------------------------
----CCAAGCTACGTGAGCCCGCCAAGTCAACAACACCAGCTTGCACTCCGGTAAACACCACAACCAACCATGCAGTCCT
TCCAA-GAAGGGTCGCCGCTGCACTGCCACCATCGTCGGCTCCGACGAACCGGTCCTACGATTTCCCCTTGTGCCCGAGG
GGACATCCAAGACCAAGACAATGCCTCCAAAGAGGAGAAC-ACCCACAAGCGTCACCATTATCTGCAACTGCTACCGCGT
AGGGATTTCTCCCCAACCATGTCGGCCAAGAACCGTTAAAGAAAAGCAGGTTGGGTTGCGGGGA
>chr5B_1
AGGCCGAGGCGCCTATGTATGC---ATACTTGATTCCCTGTTTAAGGTTTGGGAATTCTGAAATATACCAGGGGCGAATG
TTTTCTGTTGCCCTGTAATTGGACGTTGGACGAGATGATATGGATTCAGATTCAGTGCCTTGCGTGATCTTGTCAAAGGC
TGACGACTGAACGGTGAGATAACCAAAGCCGTAGACCCAGCCTCGGCAATTCAGCATGTAAAAGGCAGCAGAGTTGCAGA
TTTTTACTGCTAGAATCAAAATGCACCCCCACAACAACAAAAGAAGTATGCCCAGTGTATTATAGCAAATCCGTACTAAT
----------GATGACTTGGAGAAACAGAAGACATTGCAGAAACGCTT--------------------------------
--TAGACTTAGCAACATCTTTTGTGATATACTCCTTCCGTACTAATTTAGCCTAAAAAACGTTTTATATTTTGGTGGGAA
GAGGGGGAAGTGGCGCGCGCGGTGGGGATCGGTGGGAGGAAGCGCCGACGGGTCGCCGGAGAAGATGGGGAAGGTGCGCG
CGCGAGTGGATATTTCAGATCCGACGGTTAGTGGACATTCGTGCGGGCGAGTTGCTGTACAACGCGGTAGCGGAAACTCG
AAAAAAGCAGTGCGCGATGCAGTTCTGTTCGGCGCGTGGAGTGATTTTTAATGTGCGCGTGATTATTGCGCGCCTGCTGG
AGCTGCCGGTTCAGTCGGGCACGCTAAAAAGCCGTTTTTCAGGCGCGCAACTTATTTAGCGCATCTTGGAGATGCTCTTA
AGTAATAACAAGACGGCTT-GGTGGAGCTGGAAGATAATGCTACCTGCTAATGATGCCCATTAGTCACCAACCCCACTTT
CCTCAATATTAAATCCCCAATCAGGAGAACTGGATGAACATATATTGATAGAAACACTCGAACTTCTCCGTACCTTTTGC
AATGTTGTATATATTGTATGCACGATGGGGAGCGAACAATGCGGAGCCGCCATTATTAAAGTTGCAGAGCAACAACCTGC
GGCACAAATAGTTAAGATAGGACGGTGCTTAGCAGCCGCAGCGTGACCTAACCCCTGACGCCGCAGTGCCCTGCTAGCAC
----TATAAATTAAGGTGGAAGGTGTAATCCTCCCCAGTTCACTCAACTATCTAATCCAGTACAGTGGCTGAGCACTCGA
GTGCAGAGCCGATTAGCCTTCCGACTCCGGAACCTGCAATG-GCTGCTGCTCCGGCGACGACAGCGGTGGT---GGTGCC
GCGGATGAAGCTGGGCTCGCAGGGGCTGGAGGTGTCGGCGCTGGGGCTGGGATGCAT-------------------GGGC
CGCCCAAGCCCGAGCCCGACATGGTCGCGCTCATCCACCACGCCGTCGCCGCCGGCGTCACCCTCCTCGACACCTCCGAC
ATCTACGGCCCGCACACCAACGAGCTCCTCCTCGGGAAGGCGCTGCAGGGCGGGGTGAGGGACAAGGTGCAGCTGGCGAC
CAAGTTCGGTATCCTCGCCGGCGCCGACGGCGCGCGGGCGATCCGCGGCGACCCGGCGTACGTGCGCGCAGCGTGCGAGG
GCAGCCTCGAGCGCCTCGGCGTCGGCTGCATCGACCTCTACTACCAGCACGGCGTCGACGTCAGCGTGCCCATCGAGGTC
ACGGTGAGTGAGTCAACCTGAGTTCAACCC--------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AATCCCGTTGACTAGTCAGA
CCAACGAGCGTTGACCAAATACACCACGGTGACGCTCATCCGTATACTCCCTCCCTCCGTCCGATGA-----TATAAGAG
CGTTGTCGCTCTT--------------------------------------------------------TATATT-----
-------------------------------------------------------------------------ATGATGA
GACGGAGGGAGTACTACAAACACTATCAATGAGAGAAATTTACACGTTTGGCATCCATAGATGGGT-GAACTCAAGAAAT
TGGTTGAAGAGGGGAAGATAAAATACATTGGGCTGTCCGAAGCATCGGCGTCGACCATCTGAAGAGCGCACGCGGTTCAT
CCCATAACCGCCGTCCAGCTAGAGTGGTCGCTGTGGTCGAGAGACGTCGAGGAAGACATAATCCC--TACTTGCAGGTAC
GTACATTTTCATGCTCAATCATGACATCTCAAGATCATTTTTTGTTTCCCAATCGTATGAATTTTGTTCCTGCTC----A
TAATCTCAGGGAACTTGGCATTGGAATTGTGGCGTACAGCCCGTTGGGCAGAGGGTTCTTCTCTAGTGGGCCAAAGCTGG
TCGACACGCTGTCTGAACAAGACTTCCGCAAGGTTTGTTATATAAGCATGTCTGCCTACTTCGTTCTC--GTGTATTTGA
CAAATCCTTCTCTTTGCACAAGAAATCTTGATTTTGAGACTATTACTTCTGTTCTAAGTTTCTAACCCAACAATGCTCAA
CACATTTATTCAGGACTTGCCAAGATTTCAAGCTGAAAACCTTGAGAAGAACACCATGGTATTTGAGCGGGTTAGCACGA
TGGCGGCGAGGAAGGGGTGCACAGCGTCGCAGCTCGCACTTGCCTGGGTTCACCACCAGGGGAACGATGTGTGCCCCATA
CCAGGAACCACAAAGGTCGACAACTTCAACCAGAATGTGGCGGTGCTGTCCGTGAAGCTCACCCTAGAGGAGATGGCCGA
GCTTGAGTCCTATGCGTTGGCGGATGTTGCGGGCGATCGCTGCCATGACTTCATGAACACTTGGAAGGATTCCGAGACCC
CTCCCATTTCATCCTGGAAGGCCGAGTGACAACTTTTCGTGGGAACCGGAATAAAAGTGTTGC--TTGTTTCTTAATTTC
TCGTACCATTGGAATGTGTGTGTGTGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTTGCTT
GATTATTCATGTTGTATCCCGGGAAATACCGTGATCCGATGTATGAATGGACTCTGGAAATAATGTACGGAGTACCATCT
GTTGTGGTGGTGAGTAAG----TTACGTCCATCTGTTAAAAAGGGCCCTGGGACAACGGGGAGGCAAGTCCGAATGCAAA
ATAACTCCCAACTCATATAACCCCTTTATCCGAACCACCCAGTTGCTCCGAGATTGTTGAAGATATTGGTATCTCTACTT
GTAGTCTCTCATCCACTTCACA-TTTTTTCAAGGATACACCATGGAGAGATGTACCAGTAACATAGAAGAAGAGTGAAGA
TGGTTGATACAACTGAAAC-AATGCCCAACATCACACCACACCTACCACAATT----------ACAAC----------TC
ATCTTGTCCAACTCAAGCCATGAAGAGGCATGATGCCATACACCTCGGAAGCACGAACAAAACTCTTGGCTCGACTGACT
CAATGCACCCTTCACGCTTGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr5A_797
--------------------------------------------------------------------------------
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----------------------------------------------------------------------AACAACCTGC
GGAAGAAATCGGTAAGATACGACAGTGCATAGCAGCCGGAGCGTGACCAAATCCCTGACGCCACAGTACCCCGCTAAGCT
GTAGTATAAATGAAGGTGGAAGGTGCAGGCCTCTCCACTTCACTCAACGATTTTATCCATTACAGTGGCCATGGCAAAGC
TAGTTTCCAGTTCCAGGGAGGGAACCTGTGGCAATGGCTGCTGCTGCTGCTCCGGCGACGACGGCGGTGGTG------CC
GCGGATG-AGCTGGGCTCCCAGGGGCTGGAGGTGTCGGCGCTGGGGCTGGGCTGCATGGGCATGTCCGCCTACTACGGGC
CGCCCAAGCCCGAGCCGGACATAGTCGCGCTCATCCACCACGCCGTCGCCGCCGGCGTCACCCTCCTCGACGCCTCCGAC
ATCTACGGCCCGCACACCAACGAGCTCCTCCTCGGCAAGGCGCTGCAGGGCGGGGTGAGGGGCAAGGTGCAGCTGGCGAC
CAAGTTCGGCATCCTCGCCGGCGCCGACGGCGCGCGGGCGATCCGCGGCGACCCGGCGTACGTGCGCTCGGCGTGCGAGG
GCAGCCTCCGGCGCCTCGGCGTCGAATGCATCGACCTCTACTACCAGCACCGCGTCGACGTCAGCGTGCCCATCGAGGTC
ACGGTGAGCGAGTCAACCTCAGTTCAACCC--------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AATCCCGTTGACTAGTCAAA
CCAACGAGCGTTGACCACATGCACCAAACTGAGACCCGATAGTGGAAAAGTCAAATCTCATAAATAGTTTTTTATATAAA
CTTGGTCAAACTT--------------------------------------------------------TATATTTAGTA
TTATAGATATAAATAGTTTTCTATATAAACTTGGTCAAATTTTATATATTTTTAAAAAATCTATACGCACTACATTATAG
AACGGAGGGAGTAC----AACACTATCCATGAAAGAAACTTACACGCTTGGCATCCACATATGGGT-GAACTCAAGAAAC
TGGTTGAAGAGGGGAAGATAAACTACATTGGGTTGTCTGAAGCATCGGAGTCGACCATCCGAAGAGCGCACACGGTTCAT
CCCATAACCGCTGTCCAGCTAGAGTGGTCGTTGTGGTCGAGAGATGTCGAGGAAGATATAA-------ACTTGCAGGTAC
GTACATTTTCATGCTCAATCATGTCATGTCATGGTCATTTTTGGTTCCGTAATCGTCTGAATTTTGTTCCTGCTCGTATA
TAATCTTAGGGAACTTGGCATTGGAATTGTGGCGTACAGTCCGTTGGGCAGAGGGTTCTTCTCTAGTGTGCCAAAGCTGG
TCGACACACTGTCTGAACAAGACTTTCGCAAGGTTTGTTA--TAAGCATGTCTGCCTACTTCGCTCTC--GTGTATTTGA
CAAATCCTTCTCTTTGTACAACAAATCTTGATTTTGACACTATTACTTCTGTTCTAAGTTTCTAACCCAACAATGCTCAA
CACATTTATTCAGGACTTGCCAAGATTTCAAGCTGAAAACCTTGAGAAGAACACCATGGTATTTGAGCGGGTTAGCACGA
TGGTGGCGAGGAAGGGGTGCACGGCGTCGCAACTCGCACTTGCTTGGGTTCACCACCAGGGGAACGATGTGTGCCCCATA
CCAGGAACCACAAAGGTCGACAACTTCAACCAGAATGTGGCGGCGCTGTCCGTGAAGCTCGCCCCAGAGGAGATGGCCGA
GCTTGAGTCCTACGCATCGGCGGATGTTGCGGGCGATCG-TACCATGATTTCCTGAACACTTGGAAGGACTCTGAGACCC
CTCCCATGTCATCCTGGAAGGCCGAGTGACAAATTTTCGTGGGAACTGGAATAAAGAGTTCACTGTTTCTTTATAATTTC
TTCTACCACTCGAAGGTGTGTGTGTGTGTGTGTGT------------GTGTGTGT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GTGTTTTCTT
GACTAATCATGTTGTATCCCGGGAAGCATTGTGATCCCATGTATGAATGGACTCTGGAAATAATGTACGGAGCACCATGT
GTTGTGGTCGTGAGTAAGTTAAGCCCATTTGTTGT---AAAAGGGCCTTGGGACAACCGGGAGGCAAGTCCGAATGCAAA
ATAACTCCCAACTCATATGGCCCGTTTATCCGAACCACACAGTTACTCTGAGATTGTTGAAGATATTGGTATTTCAGCTT
GTAATCTCTCATCCAGTTCACCTTTTTTTCAAGGATACACCATAGAGAATTATACCAGTAACATAGAAGAAGAGTGAAGA
TGGTTGACACAACTGATAC-AAAGCCCAACAACCCACCACACCCACCACAATTACAACGACAGACAAC----------TA
ATATTGTCCAACTCAAGCCATGAAGAGGCACGATGCCAAACACCTCGAAAGCATGAACAAAACTCCAGGCCCGGCTGACT
CAATGCACTCTTCACGCTTGGAGCCTAGGAGATCGGCAGATGGACACCAAGAAAAAACCAAACTTGAGGAAGATGTCGTC
CAAGAGGTACCCACGATAAGGATGTACATAGCGCACCAAAGGCCGATGCCCACAACAACAACCAACTCATAGCACCACGC
CACCCCAAGTCCCGTGAGCCTGCCAAGGCAACAACACCAGCTTGCACTCTGCTAGACACCACAACCACCAATGTAGTGCT
TCCAAGGAAGGGTCACCGCCGCACTGCTACCATCGCTGGCTCCGACGAACCGGTCCTATGGTTTCCCTTTATGCCCGAGG
GGACATCCAAGACCAAGACAATGCATCCAGATAGGAGACAAACCCACACGCGTCACCATTATCTGCAACTGCTGTTGTAT
ATGGA-TTTTCCCCGTCCATGACTGCCAAGAACCGTTAGAGAAAAGCAGGTTCGGTTGCAGGGA
>chr5D_1005
--------------------------------------------------------------------------------
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-------------------------------------------CTGCTGCTCCGGCGACGACGGCGGTGGTGGCGGTGCC
GCGGATGAAGCTGGGCTCGCAGGGGCTGGAGGTGGCGGCGCTGGGGCTGGGCTGCATGGGTATGTCCGCCTACTACGGGC
CGCCCAAGCCCGAGCCCGACATGGTCGCGCTCATCCACCACGCCGTCGCCGCGGGCGTCACCCTCCTCGATACCTCCGAC
ATCTACGGCCCGCACACCAACGAGCTCCTCCTCGGCAAGGCGCTGCAGGGCGAGGTGAGGGGCAAGGTGCAGCTGGCGAC
CAAATTCGGCATCCTCGCCGGCGCCGACGGCGCGCGGGCGA----------CCCGGCGTACGTGCGCGCAGCGTGCGAGG
GCAGCCTCCGGCGCCTCGGCGTGGAATGCATCGACCTCTACTACCAGCACCGCGTCGACGTCAGCGTGCCCATCGAGGTC
ACGGTGAGCGAGTCAACCTCAGTTCAACCCACTGAAAAAAAATAGCGCGCTATAGCGTCGCTAATAGCACGCTATAGCGT
ATGGAGAATTGCCTCGCTAAATATATCAGTGTACAACGTCTCGCTAATAGCACACTGTAGCGCGATATAGCACGCTAATA
GCATATTTTGAGGTCGCCGCTATTTTGCTGTAGTGTGCTATTTTTTCATTGGTTCTACCCAATCGCGTTGACTAGTCAAA
CCAACGAGCTGGTGACGTCAATA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GAGGAAAATTTACACACTTGGCCTCCACCAGATGGTCGAACTCAAAAAAC
TGGTTGAAGAGGGGAAGATAAAGTACATCGGGCTATTCGAAGCATCGGTGTCGACCATCCGAAGAGCGCACGTAGTTCAT
CCCATAACCGCCGTCCAACTAGAGTGGTCGCTGTGGTCAAGAGATGTCGAGAAAGACATAATCCCCCTACCTGCAGGTAC
GTACATTTTCATGCTCAATCATGACATGTCAAGGTCATTTTTGGTTTCCCAATCGTAT--ATTTTGTCCCTGCTC----A
CAATCTCAGGGAACTTGACATTGGAATTGTGACGTACAGCCCGTTGTGCAGAGGCTTCTTCTCTAGTGGGCCAAAGTTGG
TCGACATGCTGTCTGAACAAGACTTCCGCAAGGTTTGTTA--TAAGCATGTCTGCCTACTTCGCTCTC--GTGTATTTGA
CAAATCCTTCTCTTTGTACAAGAAATCTTGATTTTGAGACTATTACTTCTGTTCTAAGTTTCTAACCCAACAATGCTCAA
CACATTTATTCAGGACTTACCAAGATTCCAAGCTGAAAACCTTGAGAAGAACACCATGGTGTTTGAGCGGGTTAGTGCGA
TGGCAGCGAGGAAGGGGTGCACGATGTCG-AGCTCGCACTTGCATGGGTTCACCACCAGGGGAACGATGTGTGTCCGATA
CTAGGAACCACAAAGGTCGACAACTTCAACCAGAATGTGGCGGCGCTATCCGTGAAGCTCGCCCCAGAGGAGATGGCCGA
GCTTGAGTCCTACGCGTCGGCGGATGTTGCGGGCGATCGCTACCATGATTTCCTGAACACTTGGAAGGATTCTGAGACCC
CTCTCATGTCATCCTGGAAGGCTAAGTGACAACTTTTCATGGGAACCGGAATAAAGAGTTCACTGTTTCTT----ATTTC
TTCTACCACTCGAAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GTGTTTGCTT
GATTAATCATGTTGTATCCCGGGAAGCACTGTGATCCCATGTATGAATGGACTCTGGAAATGATGTACGCAGTACCATCT
GTTGTGGTCGTGAGCAAGTTAATTACGTCCATTTGTTAAAAAGGGCCCTGGGACAACGGGGAGGCAAGTCCGAATACAAA
ATAACTCCCAACTCATATGGCCCCTTTATCCGAACCACCCAGTTGCTCCGAGATTATTGAAGATATTGGTATTTCTGCTT
GTAGTCTCTCATCCACTTCACCTTTTTTTCAAGGATACACCATGGCGAGATGTACCAGTAACATAGAAGAAGAGTGAAGA
TGGTTGATACAACTGATACTAATGCCCAACATCACAACACACCTACCACAATTACAACTACACACAAC----------TC
ATCTTGTCCAACTCAAGCCATGAAGAGGCATGATGCCATACACCTCGGAAGCATGAGCAAAACTCTTGGCTCGACTGACT
CAATGCACCCTTCACACTCGACACCTTGGAGATCGGCAGATGGACACTTAGAAACAATCGGACTTGAGGAAGATGTCATC
CAAGAGGGACCGACGACGAGGATGCACATAGCGCCCCGAAGGCCCATGCCCACATCAGCAACCAACTCATAGCACCACGC
CTCCCCAAGCTCCGTGAGCCCACCAAGGCAAAAACACCAGCTTGCACTCCGGTAAACACCACAACCACCCACGCAGTGCT
TCCAAGGA------------------------------------------------------------------------
-GACATCCAAGACCAAGACAATGCCTCCAAAGAGGAGAAC-ACCCACACGCATCACCATTATCTGCAACTGCTATCGCGT
AGGGATTTCTCCCCAGCCATGACCGCCAAGAACCGTTAGAGAAAAGCAGGTTGGGTTGCGGGGA
>SNPs
-----------------S---SSSS-------------------------------------------------------
-------------------------------------------------------------------S------------
---------S--------------------------------------S------------------S----------S-
--------S--S-------------S---------------------------------------------S------SS
SSSSSSSSSS-----------------S-----S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS--S----S--S---------S------SS-S-S-S-S-SSSSSS-S-SS-SS-SS-SSSSSSSSS-SSSSSS--SSS-
SSS--SSS-SSSS-SSS-SSSS-SSSSSSSSSSSSSSSS-S-SSSSS-SSSSS-SSSSSS-SSS-S-S-SSSS-SSS-SS
SSS-SSSSS-SSS-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
----S-----S-----------------------------S-----------------S-------------S-------
----------------------------------------S---------------------------------------
-----------------S--------------------------------------------------------------
------------------------------S-----------------S-------------------------------
-----------------------SS-------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
------------------S-------------------------------------------------------------
-S--------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S----------S--------
------S---------------------------------S------------------S-----SS-SS-SS-SS-S-S
S-S-SSS-SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--S-------------------S--S---S-----S---S------SSS--SS-------------S-------------
---S---SS-----------------------------------------S-----------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------S-------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------SS----------
S-S-S---------------------------------------------S--------------S-----------S--
--------------------------------------------------------------------------------
----------------------------------S--------------------S--------S---------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
------------------------------------S--------------------S----------------------
----S---S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-----S---------------S----------------S----S------------------------------------
------------------------------------------------S----------S--------------------
------------S--------S---------------S-----------------------S------------S-----
---S-------------------------------S--------------------------------------------
-----------------------------S-S---S-----------S--------------------SSSSSSSSSS--
-------------------------------------------------------------------S------------
-----------------------------------S--------------------------------------------
------------S-------------S---S-S-----------------------------------------------
-----------S---------------S---------------------------------------S---------S--
--------------S----S-------S-------SS---------------------S-S------S--S---------
------------------------------------------------S-------------------------S-----
---------------S-----S-S--------------S-------------------------
>forward_550
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ATGCTGACCTGTGAAAGCGA----------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>reverse_2856
--------------------------------------------------------------------------------
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-------------------------------------------------------TCAGGGGAATGATGTGTGCC-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------
>forward_559
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGTGAAAGCGACTTGGTGGT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_2865
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGATGTGTGCCCCATA
CCAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>forward_561
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGAAAGCGACTTGGTGGTC
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_2994
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TGATCGCTACCATGATTTCCTGA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>forward_1001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------ACGATGGGGAGCGAACAATC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_3129
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATGGAAGGGGTGTGTGTGTG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
