>input_sequence_46814
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---------------ATGTACACGGCGAGGAAGAAGATCCAGAAGGACAAGGGCCTCGAGCCCTCCGAGTTCGAGGACTC
CGTCGCGCAGGTAGCTAAGAAGCCCTCTAGTCTCACGTCACTGCTGTTGCGCGTGGTCTCTGCGCTCCGTGTTTCACCAC
CGCGGTTTCGTGTTTGTAGGCATTCTTCGACCTGGAGAATGGCAGCCAGGAGCTCAAGAGCGACGTTAAAGACCTCTACA
TCAACGCCGCCTTGTAAGTCATCAGCCAGTCTTAACCTTGGTTTTCGTTTCTGTTGAGTAGCAGTCCAAGTGGTAGCGAG
GTGTGATGGTTTCTGGTTTGTGCTGCCTCGTGTTGCAGCCAGATGGATGTTACAGGGAACAGGAAGGCCGTAGTCATCCA
CGTGCCGTACAGGCTCCGCAAGAACTTCAGGAAGATCCACGTCAGGCTTGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCA
AGGTTAGTGAATTGCCATTCACCTTGTTAGATTCCTTTCCTTTGAGAACAGTGTGATATAC---AGTAATCAGTATTTCA
CATAGGAGTAAGTTGGAGTAAGTTCGCTAGTCCGAAGGATTGCTTATGTGTTGTAGATTTCGTAGACAAAGATGGTATTC
CCCTACAGCTATAGCAGTATACTGCTTTACCAGAGAGCATGCCTGTATGCTCCTCCTGAATCCTGTTATGTTTTGCACTA
CACTCTGCTGCTAAAAGTACAATGCGATACCTCTGTGTGTGGAATGTTCACCATTATGCTTCCTAGACTACAACTAGGAT
GCTGTACTCTTATGGGCATGTGTTTTCCGTTTGGAAGAGTTGTATTTACTCGAATGCTGTGGCAGTTTTTTCTTATTTCC
TTCTTTGTCAGGTGCTATTTACAATGTTTGTCATCTTTTTATTCAATGTTACTGGTTTAAAGTCGAATTTGGTTGTTCGT
CTAACGTTATTGCAGAGTAATTATTGTATTCATGTCACTTCCCTGCAATTGCCAAATAATACTCTGTTCGAGAAATTTCT
TCAT------GTCTTTCGCCTAGCAAAATGCCAAACCCCCCCAATTACGCTGAAGCAAATGTTAGCCATTGTCCCGTTTG
TTCCGTGCTTGTTGAAATGTGTGGTTGACTATGACTCAATGCAGGATGTTGTTATTGTTGCAACAAGGCGGATTGTGAGG
CCACCCAAGAAGGGTTCTGCTGTTGTTCGCCCTCGTACCAGAACTTTGACCGCTGTTCATGATGGTCTTTTGGAGGATGT
TGTGTACCCAGCTGAGATTGTGGGGAAACGTGTCAGATATCGCCTAGATGGCTCGAAGATCATTAAGGTAAGATTTGACC
ACTGCATTGATATAGCTGATTATTGTCTAGACAATTTTTGATTAGCTTGAACTTTTACATCTCTATTTCACTCTTGTAAT
TTCTTCTGAATTGATCAACATTGACGCTGTTGATCCAAACAATTTTTTGTTGGTGCGCTGTTTATTTTACTGGTGTTGTT
GCAGATCTTCTTGGACCCGAAGGAACGCAACAACACAGAGTACAAGTTGGATACCTTCACTGCAGTGTACCGCAGGCTTT
GTGGCAAGGATGTTGTGTACGAGTACCCGGTTGCCGAAACTGCTTGA---------------------------------
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>chr1A_1_TraesCS1A01G129100
CCGACACTCTTGTGCTCACGTCCCCTCGCTAGCAGCATTGTCCTCATCTCTGGCGAGCACGTCTATGTGCAACATCGCCT
CCACCAACTGTTGGGTCGCAACCTCTGTGTTTGCGGCGACGACCACGAACATCTCTACACCGACCACAACCTTTACCCCT
CTTGCATCAGGCGACGTCAACTCCGTGCTTGCTCAAAACACGACCATTCTCTTGGTCCGCAAGGATGAACTCCACTTCGT
GCCACCCACTGGTATCAGCATGCCTTCTTCCAAGCTCGTCGTGTCCACTGTGCTCCCTCCATCCTCGACCGCGCGTGACG
TCGTTGCCACAACATCAACAACCACAATATGCTTGACCACCGTCTGTAAGGGGTGTGTACTCGATGAAGCGTTAGCTACA
TCCTCCCCAGTGGTCATACTGGCTTCCTTGACCACTCGCTCAATGTCAGCAACTTCCACGATGATATCTAAGGTCATTCA
CATGCCTGCCGCTACTCCTGGGCCGTCCTCGTCTGGCGACACTGACATCGTCATTAGCCTTCCCGTCACTTGTCACCCTT
CAAAAATAAATAATTAGCAATTAATCTCTTATCTTTGT--TATTCCAATAAAGCAAATCAATCATGGGCACATACCTATT
TTGCCTGTTTAAGCAATGACAGAAATATCTATGCTTTATAAACAAAACATATATT-----------------TTTTATTC
TACCTGTTTTGCATCATAATTTATCCCGTATGGTCCTCCTATATATTGTGTTAAAAATAATAATATTTGGATCA-GCGGC
AGCGCATGAGCACATACACAGTCCATTTTGTTT-TTGATAAAGATCAAAATTGGGCCAGTGCCACAGGCCTTCTGTACCG
AGCGTGGCCCAGCCCACAAACATTTTGGGATTCCTTA------------------TAGACCTATAAAATCGTATCCCACT
ACTCGCGGCCGCCTCCAAACCCTACCTCCGTGGCCGCC----------------ACCCCTCGACCTCCCTCACGCGAAGA
AAGGGCGAAAGCACCATGTACACGGCGAGGAAGAAGATCCAGAAGGACAAGGGCCTCGAGCCCTCCGAGTTCGAGGACTC
CGTCGCGCAGGTAGCTAAGAAGCCCTCTAGTCTCACGTCACTGCTGTTGCGCGTGGTCTCTGCGCTCCGTGTTTCACCAC
CGCGGTTTCGTGTTTGTAGGCATTCTTCGACCTGGAGAATGGCAGCCAGGAGCTCAAGAGCGACGTTAAAGACCTCTACA
TCAACGCCGCCTTGTAAGTCATCAGCCAGTCTTAACCTTGGTTTTCGTTTCTGTTGAGTAGCAGTCCAAGTGGTAGCGAG
GTGTGATGGTTTCTGGTTTGTGCTGCCTCGTGTTGCAGCCAGATGGATGTTACAGGGAACAGGAAGGCCGTAGTCATCCA
CGTGCCGTACAGGCTCCGCAAGAACTTCAGGAAGATCCACGTCAGGCTTGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCA
AGGTTAGTGAATTGCCATTCACCTTGTTAGATTCCTTTCCTTTGAGAACAGTGTGATATAC---AGTAATCAGTATTTCA
CATAGGAGTAAGTTGGAGTAAGTTCGCTAGTCCGAAGGATTGCTTATGTGTTGTAGATTTCGTAGACAAAGATGGTATTC
CCCTACAGCTATAGCAGTATACTGCTTTACCAGAGAGCATGCCTGTATGCTCCTCCTGAATCCTGTTATGTTTTGCACTA
CACTCTGCTGCTAAAAGTACAATGCGATACCTCTGTGTGTGGAATGTTCACCATTATGCTTCCTAGACTACAACTAGGAT
GCTGTACTCTTATGGGCATGTGTTTTCCGTTTGGAAGAGTTGTATTTACTCGAATGCTGTGGCAGTTTTTTCTTATTTCC
TTCTTTGTCAGGTGCTATTTACAATGTTTGTCATCTTTTTATTCAATGTTACTGGTTTAAAGTCGAATTTGGTTGTTCGT
CTAACGTTATTGCAGAGTAATTATTGTATTCATGTCACTTCCCTGCAATTGCCAAATAATACTCTGTTCGAGAAATTTCT
TCAT------GTCTTTCGCCTAGCAAAATGCCAAACCCCCCCAATTACGCTGAAGCAAATGTTAGCCATTGTCCCGTTTG
TTCCGTGCTTGTTGAAATGTGTGGTTGACTATGACTCAATGCAGGATGTTGTTATTGTTGCAACAAGGCGGATTGTGAGG
CCACCCAAGAAGGGTTCTGCTGTTGTTCGCCCTCGTACCAGAACTTTGACCGCTGTTCATGATGGTCTTTTGGAGGATGT
TGTGTACCCAGCTGAGATTGTGGGGAAACGTGTCAGATATCGCCTAGATGGCTCGAAGATCATTAAGGTAAGATTTGACC
ACTGCATTGATATAGCTGATTATTGTCTAGACAATTTTTGATTAGCTTGAACTTTTACATCTCTATTTCACTCTTGTAAT
TTCTTCTGAATTGATCAACATTGACGCTGTTGATCCAAACAATTTTTTGTTGGTGCGCTGTTTATTTTACTGGTGTTGTT
GCAGATCTTCTTGGACCCGAAGGAACGCAACAACACAGAGTACAAGTTGGATACCTTCACTGCAGTGTACCGCAGGCTTT
GTGGCAAGGATGTTGTGTACGAGTACCCGGTTGCCGAAACTGCTTGAAGATCCATATTTATTTGCATATTGGCCCTCTTG
TTCATGTATTGAATTTGCGACGGCTTGCTTGAGCTCGTTGTTTCTCGGATCATGTATTCGAAAAATCAAAAATATAGCTG
TGATGCCAAACCTAAATATTTGCTAGTTCGAGATGGTAACGAGTGAAAAGTGTTGAATTTTGAGCTTTAAATTAAGTTGC
ACTTGTTATATTTACGTGACGAGTGAACACTGAGTTAGGGCCTGTTCTGATCTCCTCCCACTCCATACTTCTAAAAACTT
CTGCCTGAAGGCAGCCCGAACGGATTAGCTTCACGAAGCTA----AAATTCAGGAAGCTGCGAT-GGGCTGTAGTTCATT
TTTTCGAAGC-GATAGATTCCCAGCTTCCTGTTTTCGTGAATCTGAAGCTGTTTTCGTGAATCTGAAGCTGCTTGTTATT
TACGGCCGAATTGCCACCGCCAAGAAAAACGTTTCG---CTCAACACCCCCTCGCTCGATCCCGCAGGTCAACCTGGTCG
CACACAACTCCCTTCCCCTCGCTTCTC---TGTAGCCCTACCG---------CCGCCGCCA-----------------CG
CTCAGCAGCCCCCGTCGCCGGCCAAATCGTTGACTCA-ACTACAGAACCGGCCGTCCCAGTCTATTTCCCGCCGGATCCC
ATCGTCTTCGCCGTCCGTCGCGCCTGGTGCAAGGAGCTGCAACCCCATGGCTCGGAGGAGCCGG-CCCCAACGCCATTGA
CGCCCAAGCGACGCTCCCAAGCCAGGAGTGGCACGAGGACTACCGCA-CCTCCAAGCATAAACTGCAAGGTGAGCTCGTC
CCCTTCTCTTCTTCCCTATGGATTGGTGTCCTCGC--ATGTCCTCTGTTCTGTACATCTGTGCAGTTTATTTTCAGAGTT
GTATTTGTTGTGTGCAAATTCCTACAGTAGAACCTATTCTTTGTTGTGCAA-ATCTGGAATATATG--TGCAATTCTGGA
ATCATAAGCTTTAATGCATATTGCTATGAGGGTACTGCCATGAGTGCTAACCT
>chr1D_1
CCGACACTCTCATGCTCACGCCCCCTCGCTAGCAGCATTGTCCTCATCTCTGGCGAGCACGTCTATGTGCAACATCGCCT
CCACCAACTGTTGGGTCGCAGCCTCTTTGTTTGCGGCGACGACCACGAACATCTCTACGCCGACCACAACCTTTACCCCC
CTACATT-AGGCGACGTCAACTCCGTGCTTGCTCAAAACACGACCACTCTCTTGGTCCGCAAGGATGATCTCCACTTCGT
GCCACCCACTAGTGTCAGCATGCCTTCTTCCAAGCTCGTCGTGTCCACTGTGCTCTCTCCATCCTCGACCAAGCGTGACG
TCGTTGCCACGACATCGACAACCACCATATGCTTGACCACCGTCCATAAGGGGTGTGTACTCGATGAAGCGTTAGCTACA
TCCTCCCTGATGGCCATACTGGCTTCCTTGACCACTGGCTCAATGGCAGCAACTTCCACGATGACATCTAAGGTCATTCA
CGTGCCTGCCGCTACTCCTTGTCCGTCCTCATCTGGCGACACTAACATCGTCATTAGCCTGCCCGTCACCCGTCACCCAT
CAAAAATAAATAATTAGCAATTAATCTCTTATCTTAGT--TAATCCAATAAAGCAAATCAATCATGGGCACATTGT----
----CTGTTTAAGCAATGACAGAAA-ATCTATGCTTTAAATATAATTTTTTTGCGGGCAAAATATAATTTTGTTTTATTC
TATCTGTTTTGCATCATAATTTATCCCGTATAGTCCTCCTATATATTGTGTTAATAATAATAATATTTGGATCATGCGGC
AACGCCTGGGCACATACATAGTCCAATTTTTTTGTTGATAAAGATCGAAATTGGGCTAGTGCGACAGGCCTTCTGTACCG
AGCATGGCCCAGCCCACAA-----------------A------------------TAGACCTATAAAATCGTATCCCACT
ACTCGCGGCCGCCTCCAAACCCTACCTCCGTGGCCGCC----------------ACCCCTCGACA-CCCTCAGGCGAAGA
AAGGGCGAAAGCACCATGTACACGGCGAGGAAGAAGATCCAGAAGGACAAGGGCCTCGAGCCCTCTGAGTTCGAGGACTC
CGTCGCGCAGGTAGCTAGGAAGCCCTCTCGTCTCACGTCACTGCTGTTGCGCGTGGTCTCTGCGCTCCGTGTTTCACCAC
CGCGGTTTCGTGTTTGTAGGCATTCTTCGACCTGGAGAATGGCAGCCAGGAGCTCAAGAGCGACGTTAAAGACCTCTACA
TCAACGCCGCCTTGTAAGTCATCGGCCAGTCTTAACCTTGGTTTTCGTTTCTGTTGAGTAGCAGTCCAAGTGGTAGCGAG
GTGTGATGGTTTCTGGTTTGTGCTGCCTCGTGTTGCAGCCAGATGGATGTTGCAGGGAACAGGAAGGCCGTGGTCATCCA
CGTGCCGTACAGGCTCCGCAAGAACTTCAGGAAGATCCACGTCAGGCTCGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCA
AGGTTAGTGAATTGCCATTCACCTTGTTAGAATCCTTTCCTTTGAGAACAGTGTGATCTGGAGTAGTAATCAGTATTTTA
CATAGGAATAAGTCGGAGTAAGTTCGCTAGTCCGAAGGATTGCTTATGTGTTGTAGATTTCGTAGACAAAGATGGTATTC
CCCTACGGCTATAGCAGTATACTACTTTACCAGAGAGCATGCCTGTATGCTCCTCCTGAATCCTGTTATGTTTTGCACTA
CACTCTGCTGCTACAAATACAATGCGATACCTCTGTGTGTGGAATGTTCACCAGTATGCT---------ACAACCAGGAT
GCTGTACTCTTATGGGCATGTGTTTTCCGTTTGAAAGAGTTGTATTTACTCAAATGCTGTGGCAGTTATTTCTTATTTCC
TTCTTTGTCAGGTGCCATTTACAATGTTTGTCATC-TTTTATTCAATGTTACTGGTTTAAAGTCGAATTTGGTTGTTTGT
CTAACGTTATTGCAGAGTAATTATTGTATTCACGTCACTTCCCTCTAATTGCCAAAT-ATACTCTGTTCGAGAAATTTCT
TCATAGTTGTGTCCTTCGCTTAGCAAAATGCCAAAAGCCCCCAATTACACTGAAGCAAATGTTAGCCATTGTCCCGTTTG
TTCCGTGCTTGTTGAAATGTGTGGTTGACTAGGAATCAATGTAGGATGTTGTTATTGTTGCAACAAGGCGGATTGTGAGG
CCACCCAAGAAGGGTTCTGCTGTTGTTCGCCCTCGTACCAGGACTTTGACCGCTGTTCATGATGGTCTTTTGGAGGATGT
TGTGTACCCAGCTGAGATTGTGGGGAAACGTGTCAGATATCGCCTAGATGGCTCGAAGATCATTAAGGTAAGATTTGACC
ACTGCATTGATATAGCTGATTATTGTCTAGACAATTTTTGATTAGCCTGAACTTTTACATCTCTATTTCGCCCTTGTAAT
TCCTTCCAAATTGATCAACATTGACACTTTTGATCCAAACAATTTTTTGTTGGTGCCCTGTTTATTTTACTGGTGTTGTT
GCAGATCTTCTTGTACCCAAAGGAACGCAACAACACAGAGTACAAGTTGGATACCTTCACTGCAGTGTACCGCAGGCTTT
GTGGCAAGGATGTTGTGTACGAGTACCTGGTTGCCGAAACTGCTTGAAGATCCATCTTGATTTGCATATTGGCCCTCTTG
TTCATGTATTGAATTTGCGACGGCTTGCTTGAGCTTGTTGTTGCTCGGATCATGTATTCGAAAAATCAAAATTATAGCTG
TGATGCCAAACCTAAATATTTGCTAGTTCGAGATGGTAATGAGTGAAAAGTGTTGAATTTTGAGCTTTAAATTAAGTTGC
ACTTGTTCTAT-TATGTGACGAGTAAACACTGAGTTAG------------------------------------------
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>chr1B_220
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-----------------------------------------------------------CAAGGATGATCTCCACTTCAT
GCCACCCACTGGTGTCAGCATGCCTTCTTCCAAGCTCGTTGTGTCCACTGTGCTCCCTCCATCCTCGACCACGCGTGACG
TCGTTGCCACAACATCAACAACCACCATATGCTTGACCACCGTCCGTAAGGGGTGTGTACTCGATGAAGCGTTAGCTACA
TCCTCCCAAGTGGTCATACTGGCTTCCTTTACCACTTGCTCAATGGCAGCAGCTTCCATGATGACATCTAAGGTCATTCA
CGTGCCTGCCGCTACTCTTGGCCCGTCCTCATCTGGCGACATTGACATCGTTATTAGCCTGCCCGTGACCCGTCACCCAT
GAAAAATAAATAATTAGCAATTAATCTCTTATCTTTGTTATAATCCAATAAAGCAAATCAATCATGGGCACGTACCTATT
TTGC-----------------------------------------------------------------TTGTTTAATTA
TATCTGTTTTGTATCATAATTTATCCCGTAT-GTCCTCCTATATATTGTGTTAAAAATAATAATATTTGGATCATGCGGC
AACGCATGGGCACATACACAGTCCATTTTTTTTT---ATAAAGATCGAAATTGGGCCAGTGCGACAGGCATTCTGTACCG
AGCATGGCCCAGCCCACAA-----------------ACATTTTGGGATCCCCTTATAGACCTATAAAATCGTATCCCACT
ACTCGCGGCCGCCTCCAAACCCTACCTCCGTGGCCGCCTCCAAACCCTACCGCCACCCCTCGACCTCCCTCAGGCGAAGA
AAGGGCGAAAGCACCATGTACACGGCGAGGAAGAAGATCCAGAAGGACAAGGGCCTCGAGCCCTCCGAGTTCGAGGACTC
CGTCGCGCAGGTAGCCTGGAAGCCCTCTCGTCTCACGTCAGTGCTGTTGCGCGTGGTCTCTGCGCTCCGTGTTTCACCAC
CGTTGTTTCGTGTTTGCAGGCATTCTTCGACCTGGAGAATGGCAGCCAGGAGCTCAAGAGCGACGTTAAAGACCTCTACA
TCAACGCCGCCTTGTAAGTCATCAGCCAGTCTTAACCTTGGTTTTCGTTTCTGTTGAGTAGCAGTCCAAGTGGTAGCGAG
GTGTGATGGTTTCTGGCTTGTGCTGCCTCGTATTGCAGCCAGATGGATGTTGCAGGGAACAGGAAGGCCGTGGTCATCCA
CGTGCCGTACAGGCTCCGCAAGAACTTCAGGAAGATCCACGTCAGGCTTGTCAGGGAGCTCGAGAAGAAGTTCAGCGGCA
AGGTTAGTGAATTGCCATTAACCTTGTTAGAGTCCTTTCCTTTGAGAATAGTGTGATCT-----AGTAATCAGTATTTCA
CATAGGAGTAAGT-GGAGTAAGTTTGCTAGTCAGAATGATTGCTTATGTGTTGTAGATTTCGTAGACAAAGATGGTATTC
CCCTACAGCTATAGCAGT---------------AGAGCATGCCTGTATGCTCCTCCTGAATCCTGTTATGTTTTGCACTA
CACTCTGCTGCTACAAATACAATGCGATACCTCTGTGTGTGGAATGTTCACCAGTATGCTTCCTAGTCTACAACTAGGAT
GCTGTACTCTTATGGGCATGTGTTTTCCGTTTGGAAGAGTTGTATTTACTCAAATGCTGTGGCAGTTATTTCTTATTTCC
TTCTTT-TCAGGTGCCATTTACAATGTTTGTCATC-TTTTATTCAGTGTTACTGGTTTAAAGTCGAATTTGGTTGTTTGT
CTAACGTTATTGCAGAGTAATTATTGTATTCATGTCACTTCCCTCTAATTGCCAAAT-ATACTCTGTTCGAGAAATTTCT
TCATAGTTGTGTCCTTTGCCTAGCAAAATGCCAAAACCCCCCAATTACGCTGAAGCAAATGTTAGCCATTGTCCTGTTTG
TTCCGTGCTTGTTGAAATGTGTGGTTGACTATGACTCGATGTAGGATGTTGTTATTGTTGCAACAAGGCGGATTGTGAGG
CCACCCAAGAAGGGTTCTGCTGTTGTTCGCCCTCGTACCAGGACTTTGACCGCTGTTCATGATGGTCTTTTGGAGGATGT
TGTGTACCCAGCTGAGATTGTGGGGAAACGTGTCAGATATCGCCTAGATGGCTCGAAGATCATCAAGGTAAGATTTGACG
ACTGCATTGATATAGCTGATTCTTGTCTAGACAATTTTTGATTAGCCTGAACTTT-ACATCTCTATTTCACCCTTGTAAT
TTCTTCCGAATTGATCAACATTGACACTTTTGATCCAAACAATTTTTTGTTGGTGCCCTGTTTATTTTACTGGTGTTGTT
GCAGATCTTCTTGGACCCAAAGGAACGCAACAACACAGAGTACAAATTGGATACCTTCACTGCAGTGTACCGCAGGCTTT
GTGGCAAGGATGTTGTGTACGAGTACCCGGTTGCCGAAACTGCTTGAAGATCCATCTTAATTTGCATATTGGCCCTCTTG
TTCATGTATTGAATTTGCGACGGCTTGCTTGAGCTCGTTGTTGCTCGGATCATGTCTTCGAAAAATCAAAATTATAGCTG
TGATGCCAAACCTAAATATTTGCTAGTTCGAGATGGTAATGAGTGAAAAGCGTTGAATTTTGAGCTTTAAAATAAGTTTC
ACTTGTTCTAT-TATGTAACGAGTAAACACTGAGTTA-------------------------------------------
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>chr7B_2851
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----------------------------------TTAGAGCCTGTTCTGATCTCCTCCCACTCCATACTTCTAAAAACTT
CTGCCCGAAGCCAGCCCGAACGGATTAGCTTCACGGAGCTA----AAATTCAGGAAGCCGCGAT-GGGCTGTAGTTCATT
TTTTCGAAGC-GACAGAATCCCAGCTTCCCGTTTTCGTGAA--------------------TCTGAAGCTGCTCGTTATT
TACGGCCGAATTGCCACCGCCAAGAAAAACGTTTCG---CTCAACTCCCCCTCGCTCGATCCCGCAGGTCAACCTGGTCG
CACACAACTCCCTTCCCCTCGCTTCTCCTCTGTAGCCCTACCGCCGCCATTGCCGCTGCCA-----------------CG
CCCAGCAGCCCCCGTCGCCGGCCAAATCGTTGACTCAGACTACAGATCCGGCCGCCCCAGTCTATTTCCCGCCGGATCCC
ATCGTCTTCGCCGTCCGTCGCGCCTGGTGCAAGGAGCTGCGACCCCATGGCCCGGAGGAGCTGT-CCCCAACGCCATTGA
CGCCCAAGAGACGCTCCCAAGCCAGGAGTGGCACCAGGACGACCGCG-CCTCCAAGCATAAACTGCAAGGTGAGCTCGTC
CCCTTCTCTTCTTCCCTATAGATTGCTGTCCTCGCGCATGTCCTCTGTTCTGTACATCTGTGCGATTTATTTTCAGAGTT
GTATTTGTTGTGTGCAAATTCCTACACTGGAACCTATTGTTTGTTGTGCAA-ATCTGGAATATATGTGTGCAATTCTGGA
ATCATAAGCTTTAATGCATATTGCTATGTGGGTACTGCCATGAGTGCTAACCT
>chr6A_2851
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----------------------------------TTAGGGCGTGTTTTGATCTCCTCCCACTCCATACTTGTAAAAACAT
CTGCCCGAAGCCAGCCCGAACGGATTAGCTTCGCGAAGCTG----AAATTCAGGAAGCCCCGAT-GGGATGTAGTTCATT
TTTTCGAAGCTGACAGAATCCCAGCTTCCCGTTTTCGTGAA--------------------TCTAAAGTTGCTTGTTATT
TACGGCTGAATTGCCATCGC-AAGAAAAACGTTTCG---CTCAACTCCCCCTCACTCGATCCCGCGGGTCAACCTGCTCG
CACACAACTCCCTTCCCCTCGTTTCTCCTCTGTAGCCCTAGCGCCGCCGTTGCCGCCGCCA-----------------CG
CCCGGCAGCCCCCGTCGCCGGCCAAATCGTTGACTCAGACTACAGATCCGGTCGCTCCAGTCTATTGCCCGCCGGATCCC
ATCATCTTCGCCGTCCGTCGCGCTTGGTGCAAGGAGCTGCGACCCCATGGCTCGGAGGAGCTGG-CCCCAACGCCATTGA
CGCCCAAGCGACGCTCCCAAGCCAGGAGTGGCACCAGGACGACCGCG-CCTCCAAGCATAAACTGCAAGGTGAGCTCGCC
CCCTTCTCTTCTTCCCTATGGATTGGTGTCCTCGCTCATGTCCTCTGTTCTGTACATCTGTGCAGTTTATTTTCAGAGTT
GTATTTGTTGTGTGCAAATTCCTACACTGGAACCTATTGTTTGTTGTGCAATTTCTGGAATATATGTGTGCAATTCTGGA
GTCATAAGCTTTAATGCATATTGCTATGTGGGTACTGCCATGAGTGCTAACCT
>chr6A_2851
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----------------------------------TTAGGGCCTGTTCTGATCTCCTCCCACTCTAAACTTCTGAAAAATT
CTGACCGAAGCAGGGCCTAACGGAATAGCTTCTCGAAGCTG----CAATCCAGGAAGCCACGAT-GGGCTGCAGTTCATT
TTTTTGAAGC-GACCGATTCCCAGCTTCACGTATTTGTGAA--------------------TCGGAAGCTGCA-GTTATT
TACGGCCGGATTGCCACCGCCAAGAAAAACGGTTCGCTCCTCATCTCCAACTCGCTCCATCCCACAGA--AACCCCCTCG
CTCACAACTCCCCTTCCCCTCGTTCTCCCCTGCAACCCTAGCGCCGTCATTCCCGCCGCCA-----------------CG
CCCGGCAGCCCCCGTCGCCGGCCAAATCGCCCCCTGTGACTACAGATCCGGCCGCCCCAGTCTATTTCCCGCCGGATCCC
ATCTTCGCCGCCGTCAGATGCGCCTGCTGCAAGGAGCTGCGCCCCCATGTCTCAGAGGAGCTACACCCCGACGCCATTGA
TGCCCGAGCGACGCTCCCAAGCTAGGAGCTGCACCAGGACGACC------------------------------------
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>chr5A_2851
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----------------------------------TTAGGGCCTGTTCTGATCTCCTCCCACTCTAAACTTCTGAAAAATT
CGGATCGAAGCAGGGCCGAACGGAATAGCTTCTCGAAGCTG----CAATCCAGGAAGCCACGAT-GGGCTGCAGTTCATT
TTTTTGAAGC-GACCGATTCCCAGCTTCACGTATTTGTGAA--------------------TCGGAAGCTGCA-GTTATT
TACGGCCGGATTGCCACCGCCAAGAAAAACGGTTCGCTCCTCACCTCCAACTCGCTCCATCCCGCAGA--AACCCCCTCG
CTCACAACTCCCCTTCCCCTCGTTCTCCTCTGCAACCCTAGCGCCGCCATTCCCGCCGCCA-----------------CG
CCC-GCAGCCCCCGTCGCCGGCCAAATCGCCCCCTGTGACTACAGATCCGGCCGCCCCAGTCTATTTCCCGCCGGATTCC
ATCTTCGCCGCCGTTCGATGCGCCTGCTGCAAGGAGCTGCGCCCCCATGTCTCAGAGGAGCTACACCCCGACGCCATTGA
CGCCCGAGCGACGCTCCCAAGCTAGGAGCTGCACCAGGACGACC------------------------------------
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>chr5D_2851
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----------------------------------TTAAGGCCTGTTCTGATCTCCTCCCACTCCAAACTTCTGAAAAATT
CTGACCGAAGCCAGCCCGAACGGAATAGCTTCTCGTAGCTGCCTGCAATCCAGGAAGCCACGATGGGGCTGCAGTTCATT
TTTTTGAAGC-GACCGATTCCCAGCTTCACGTATTTGTGAA--------------------TCGGAAGCTGCA-GTTATT
TACGACCGGATTGCCATCGCCAAGAAAAACGGTTCGCTCGTCATCTCCAACTCGCTG--------AGA--AACCCCCTG-
--------TCCCCTTCCCCTCCTTCTCCTTTGCAACCCCAGCGCCGCCGTTCCCGCCGCCACGCCCGGCAGCCCCCGTCG
CCCGGCAGCCCCCGTCGCCGGCCAAATCGGCCCCTCTGACTACAGATCCGGCCGCCCCGGTCTATTTCCCGCCGGATCCC
ATCTTCGCCGCCGTCCGACGCGCCTGCTGCAAGGAGCTGCGACCCCATGTCTCAGAGGAGCTAG-CCCCGACGCCATTGA
CGCCCGAGCGACGCTCCCAAGGTAGGAGCGGCACCAGGAAGACCACGCCCCCGAAGCCTAAGCTGCAAGGTGAGCTCGTC
CCCTTCTCTTCTTCCCCATGGATCGGTGTCCTGGCTCATGTTCTCTGTTCTCTACATGTGTGCAGTTTATTTTCAGAC--
-TACTTGTTGTGTGCAAAATCCTAC-------------------------------------------------------
-----------------------------------------------------
>chr5B_2853
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------------------------------------AGGGCGTGTTCTGATCTCCTCCCACTCCATACTGCTAAAAAATT
CT-ACCAAAGCCAGCCCGAACGGATTAGCTTCGCGAAGCTG----AAATCCAGGAAGCCACGAT-GGGTTGTAGTTCATT
TTTTCGAAGC-GACCGATTCCCAGCTTCCCGTTTTTGTGAA--------------------TCTGAAGCTGCTTGTTATT
TACGGCCGAATTGCCACCACCAAAGAAAACGTTTCG---CTCAACTCCCCCTCGCTCCATCCCGCAGGTCAACCCGCTCG
CCAACATCTCCCTCCCCCTCGTTTCTCCTCTGTAGCCCTACCGCCGCCGTTGCGGCTGCCACA-----------------
CCTGGCAGCCCTCGTCGCCAGCAAAATCATTGACCTGGACTACAGGTCCGGCCACCCCAGTCTATTTCCTACTGGGTCCC
ATTGTTGTCACCGTCCGTCGCGCCTTGTGCAAGGAGCTGCGACCCCATGGCTGGGAGGAGCTGG-CCCCAACGCCATTGA
CACCCAAGCGATGCTCCCAAGCCAGGAGTGGCACCAGGACGATTGCT-CCTCCAAGCATAAACTGCAAGGTGAGATCGTC
CCCTTCCCTTCTTCCCTATGGATTGGTGTCCTGGCTCATGTCCTCTGTTCTGTACATCTGTGCAGTTTATTTTCAGAGTT
GTATTTGTTGTGTGCATATTCCTACACAGGAACCTATTGTTCGTTGTGCAG-TTCTAGAATATATGTGTGCAATTATGGA
ATCATAAATTTTAATGTAGATTGCTATGTGGGTACTGCCATGAGTGCTAA---
>chr4B_2854
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GGGCCTGTTCTGATCTCCTCCCACTCCATACTTCTAAAAACTT
CTGCCCGAAGCCAGCCCGAACGGATTAGCTTCACGAAGCTA----AAATTCAGGAAGCCGCGAT-GGGCTGTAGTTCATT
TTTTCGAAGC-GACAGATTCCCAGCTTCCCATTTTCGTGAA--------------------TCTGAAGCTGCTCGTTATT
TATGGCCGAATTGCCACCGCCAAGAAAAACATTTCG---CTCAACTCCCCCTCACTTGATCCCGCAGGTCAACCTGGTTG
CACACAACTCCCTTCCCCTTGCTTCTCCTCTGTAGCCCTACCGCCGCCGTTGCCGCCGCCA-----------------CT
CCCGGCAGCCCCCGTCACCGGCCAAATCATTAACTCAGACTACAGATTCGGCCGACCCAGTCTGTTTCCCGCTGGATCCC
ATCGTCTTCGCCGTCCGTCACGCCCGGTGCAAGGAGCTGCAACCCCATGGCTCGGAGGAGCTGG-CCCCAACGCCATTGA
CGCCCAAGAGACGCTCCCAAGCCAGGAGTGGAACCAGGACGACCGCG-CCTCCAAGCATAAACTGCAAGGTGAGCTCGTC
CCCTTCTCTTCTTCCCTATGGATTGGTGTCCTCGCGCATGTCCTCTATTCTGTACATCTGTGTGATTTATTTTCAGAGTT
GTATTTGTTGTGTGCAAATTCCTACACCGGAACCTATTGTTTGTTGTGCAA-ATCTGGAATATATGTCTGCAATTCTGGA
ATCATAAGCTTTAATGCATATTGCTATGTGGGTACTGCCATGAGTGCTAACCT
>SNPs
----------SS--------S-----------------------------------------------------------
--------------------S-----S-------------------------------S--------------------S
--SSSS-S--------------------------------------S---------------------S-----------
-------------S--------------------------------------------------------S---------
-------------------------S------------------S-----------------------------------
-------S----------------------------S--------S------------------S---------------
-S-------------------S--------S-----------------------------S--------SS-------S-
------------------------------------------S-------------------------------------
-------------------------S------------S-S-S--SSSS-S-SSS-------------------------
--S----------------------------S------------------------------------------------
-S------S--------------------S----------------S---------------S-----------------
---S---------------SSSSSSSSSSSSSSSSS--------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
-----------------S----------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------------------S--------
--------------------------------------------------------------------------------
-------------------------------S-------------------------S-SS-------------------
-------------S------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-------------S--S------------------------------------S------------S-------------
---------------------------------------------------S---------------S------------
---------------S-------------------S-----------------------------------------S--
--------------------------------------------SS-----------S----------------------
-------------S---------------------S--------------------------------------------
-----------------------------------------S--------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S------------------------S--------
------S------------------S--S---------------------------S-----------------------
------------------S-------------------------------------------------------------
-------------------------------------------------------S--S---------------------
------------------------------------------S----------------------------S--------
---------------------------------------S----------------------------------------
-------S---S--S---------S-------------------------------------------------------
-----S----S-----------------------------------------------S---------------------
-------------S---------------S-----------SSSSSSSSSSSSSSSSSSSS-------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------S-------S-------------------------
-------------------------------------------------------------S------------------
----------------------------------S-----S-----S---------------------------------
--------------------------------------------------------------------------------
--------------------------S-S---------S-----------------------------------------
----------------------------S------------------------
>forward_408
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GCGTTAGCTACA
TCCTCCCC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1704
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GCTTTACCAGAGAGCATGCC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_906
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GCCCAGCCCACAAACATTTT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_2094
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TTTCGCCTAGCAAAATGCCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1432
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGGGAACAGGAAGGCCGTA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_3019
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TGCGATGGGCTGTAGTTCAT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
