>input_sequence_46789
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ATGTGCGAGGGGCGGCGCCCCGGGCACGCGAGCCGGCCGCCGTGGGCGCTGGCGGCGGAGCTGCGGCG
GAGGGAGGCCGCGGCGGACGCGCGGCTGGCGGCGGCGCGGGCGCGGCTGGCCGAGGCGCTGGCGGAGCTGGAGCGGGCGC
GGGCGCGCGCCGCCGAGCTGCAGCGCCGCCTGGAGGAGAACTACGGCAAGCGGCGCCGGCTCAAGCGGGTGGTGGCCGCC
ACCCGCTCCCGGATCCACGACACCCGCGCGCTCCTCCAGGACCACCAGGACCCG---CCGCCGCCGCAGCAGCAGCA---
GCTCCCCGCCGAATCCGATCCCACCTCCTAGGTAGGCCTGGCCGTCTTCCTCGATTAAGCCCTCGTCGTGATCAA-CCGA
TTGATCGAAGCGTAAACAGTA----TCTGACATCG-----TCCTCTCCTCTTGATTCGTCGTCCGCAGAGAGGGAGTCGC
GGCAGGGTGATGTGAAGTCCTGCTCTGAAGACC-GACCGGATCGGCAGGCTGCGAGCCTACACAGCTACTGATTTCATTC
CCCTTTCTTCATCTTTTTTTCGCGTC--GGAAGCTAGC---------TAGTAGCCTAGTAGCTAGCCTCTGCAACATACG
GGCG----GGGCGAATGTTCCATGGGACATCAATC----AGAAAAAGGCTTGTCATGTCATTCGCGTCGCATACAGTGAC
TGAAATGAATCGGAAG---TCAGCACCTGGCAGGGACTCACTCTGTAATACAGTACACTAGTAGTAATAATCATGCCTTC
GGTGACTGCACGCATACATGTGCCGAAATCTTCAGCTCCTGTCGTGTCAAACA------TATATGCTACCGTCACGAAAC
CCTGTTATGTCATTCACTTGGGTGCGCTGAAAGGAGCTGGCCGAGATGCCCGCATTCCTTTTAGATGAGTTGCCCGCGAT
TGCAAGGAAAGAAT-------ATCAGACGCAACGCTCACCAATGACTG------TAGCATTCCTTGCCGCTGCCGTCGCA
GGC-----TCAATAATCTCCACATACCCAATGGTATAGAGAAGATCATGCTGAGATAAGACAAGAC--CGATGCTAGAGT
GTACCATGGCATATTATGCTGTCCAACTTTCATCGTCGCACACAAGGAAGAATGCTGTCGAACATGGCACATTATGCAGT
CAAGGGCGGGAGCGATGGAGTACTGTATAGTTTCATCAGCCTGAATTCTTACATGAGTTGACACAACAAAATATAAATCG
ATCCCGATATCGAAAACTCGACTCTACAGAGCTCTTGTATGCACGGTTCCCAGGGTTCACAAAATCAAGTCCGCCATATG
GTCTATACTACAACCAACGAATTCATTCACTTGAATAACTGCTTGTAACGAGGTGTAAAGGTGGCTTCAAACTACTCGCT
TGAACGGGCAGATACGGGATACAAGTCATCGAAGCATCACTTGATCCAGAATTTCTTTCTCCAGTGTTATAACAGGCCGG
---CTTCCTTGTTTAGTAGAATCACCATATCTTGTTCTTGGCCCAGAACAGTATTATTACAACCCCAATCACAATGGCAA
CCGGAGCATACTTCCGAATGAAGGCCTGAAACCAAGAAGCAGCACAATTAACATAGAAGTCAAAACACTAAACATAATAC
ATGATGGAAC-TTTTTCAGAAATACG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>chr5A_1_TraesCS5A01G428700
TTCGTACGAATTTCATCTGGACTTTGCAATAAATGGAAGGAATCTCATCAATAATTGTGAAAGATTTAGAGTTCTTGCCC
TCGTAGAACCGATCTTTTGGATTTGTT-GACTTCTTGTTAGTGCACCTCCGTGCTTTTGCTGGTATGGTTTTTTCTTTAG
AACTGGAATCTTTCTTTGGAAG-TACGACGAAGATTGTGATTCGAGAGTCTACACTTCCAGGGGGGGTCATCACCAGCCC
AAGTGCATTCATTGCTCAATACTTTCCATCTCTTTAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------ATGGGC
AAGCGAAGGAGCTCAT-TGAAATCTCTATTGATAGTCAAGTTCATGCCAATGTACGAGCGGTGGCGTCGCCGCTCCGGTC
TGACTGCATTATCTTAGTTGAACCCTTGGCAAAATTTCATCTTTCAAAAAGTTATTACCGTGGAGAAGGCGTATCTGAAA
GATTTGATTGCAATTTTTAGTTTC--AACAGCTACTTTGTCTACTTGTCTTAA---------------------------
------------------------------------------------AAAAAAGACTTTTCCATTCGTAGTACGTATTA
CTCACTCCGTTTCAAAATAGATGACTCGACTTTATACTAACTTTAGTATAAAGTTAGTATAAAGTTGGGTCATCTATTTT
GAATCGGATGGAGTACTAGTTAGCTGCCCAATCTCGAGTCTCGCCATTGTTTGTTTGGAAGGTACGGTGGAAGAAATAAT
GCCCAATAATTGCAGGCAACAGGAAGAGGACATGATGATCGATGCTTCACCGTCCGCCGATCGCCAATAATCAGTCGTAC
TGCCAATTCCATGGGGAGTTTGCAGGAAACGGAAAGAATCGCGTCGATAATGGGGACGGATTTCGTGTCCGTGC-----G
TCGTCGCTGTCAGGCAAGGCACGCCAAGCCCGCAAGTGAAAAG------GGGGAGCGTCCGCCCTTCCCTTCCCTTCCCC
GCACCCACCCCAACCAAAGCCCACTTCTTTGCCCCCACTTGGCCTTCTTCTCCTTCCCCGCGAGGCGACCGACGCGGAGG
GTAGG----AGGATGTGCGAGGGGCGGCGCCCCGGGCACGCGAGCCGGCCGCCGTGGGCGCTGGCGGCGGAGCTGCGGCG
GAGGGAGGCCGCGGCGGACGCGCGGCTGGCGGCGGCGCGGGCGCGGCTGGCCGAGGCGCTGGCGGAGCTGGAGCGGGCGC
GGGCGCGCGCCGCCGAGCTGCAGCGCCGCCTGGAGGAGAACTACGGCAAGCGGCGCCGGCTCAAGCGGGTGGTGGCCGCC
ACCCGCTCCCGGATCCACGACACCCGCGCGCTCCTCCAGGACCACCAGGACCCG---CCGCCGCCGCAGCAGCAGCA---
GCTCCCCGCCGAATCCGATCCCACCTCCTAGGTAGGCCTGGCCGTCTTCCTCGATTAAGCCCTCGTCGTGATCAA-CCGA
TTGATCGAAGCGTAAACAGTA----TCTGACATCG-----TCCTCTCCTCTTGATTCGTCGTCCGCAGAGAGGGAGTCGC
GGCAGGGTGATGTGAAGTCCTGCTCTGAAGACC-GACCGGATCGGCAGGCTGCGAGCCTACACAGCTACTGATTTCATTC
CCCTTTCTTCATCTTTTTTTCGCGTC--GGAAGCTAGC---------TAGTAGCCTAGTAGCTAGCCTCTGCAACATACG
GGCG----GGGCGAATGTTCCATGGGACATCAATC----AGAAAAAGGCTTGTCATGTCATTCGCGTCGCATACAGTGAC
TGAAATGAATCGGAAG---TCAGCACCTGGCAGGGACTCACTCTGTAATACAGTACACTAGTAGTAATAATCATGCCTTC
GGTGACTGCACGCATACATGTGCCGAAATCTTCAGCTCCTGTCGTGTCAAACA------TATATGCTACCGTCACGAAAC
CCTGTTATGTCATTCACTTGGGTGCGCTGAAAGGAGCTGGCCGAGATGCCCGCATTCCTTTTAGATGAGTTGCCCGCGAT
TGCAAGGAAAGAAT-------ATCAGACGCAACGCTCACCAATGACTG------TAGCATTCCTTGCCGCTGCCGTCGCA
GGC-----TCAATAATCTCCACATACCCAATGGTATAGAGAAGATCATGCTGAGATAAGACAAGAC--CGATGCTAGAGT
GTACCATGGCATATTATGCTGTCCAACTTTCATCGTCGCACACAAGGAAGAATGCTGTCGAACATGGCACATTATGCAGT
CAAGGGCGGGAGCGATGGAGTACTGTATAGTTTCATCAGCCTGAATTCTTACATGAGTTGACACAACAAAATATAAATCG
ATCCCGATATCGAAAACTCGACTCTACAGAGCTCTTGTATGCACGGTTCCCAGGGTTCACAAAATCAAGTCCGCCATATG
GTCTATACTACAACCAACGAATTCATTCACTTGAATAACTGCTTGTAACGAGGTGTAAAGGTGGCTTCAAACTACTCGCT
TGAACGGGCAGATACGGGATACAAGTCATCGAAGCATCACTTGATCCAGAATTTCTTTCTCCAGTGTTATAACAGGCCGG
---CTTCCTTGTTTAGTAGAATCACCATATCTTGTTCTTGGCCCAGAACAGTATTATTACAACCCCAATCACAATGGCAA
CCGGAGCATACTTCCGAATGAAGGCCTGAAACCAAGAAGCAGCACAATTAACATAGAAGTCAAAACACTAAACATAATAC
ATGATGGAAC-TTTTTCAGAAATACGCAGATCGTGATGCAAATTGGGGACTATATAGAAATGTGGATAATGAAGCTAATA
AAGTATCACCTCCGTTCCCAATTATAAGACATTTTGGATATTTCAATATAGACT--ACATACATACTGAAATGAGTGAAC
AAACAC--------G--TCTATATACATCTGATTCAGGAAAAGTTAGAACATCTTGTACTGTAATTCGAAACGGAGGGAG
TAATCA-TAAGACTTCCATCAAGGACACAAAGTCTTGACAGACACTGCAATTGCAAATGCTTGCCTTCTAAAAATTTATC
AGATTTACCTGGGTAGTAACTAGAAACT----CCATTTTGCTAACCACAGGGTATACTTGTGAACTATCAGCCTAATAAC
AACAGGTGTGTTGGAAGCATATAAACTT----TAGTCAAACAAAAATTAGAGAGTATTTTTCATCCATGGAACATACTCC
CTCTGTCCCAAAATAATCTTCTTAACTTTGTACTAACTTTAGTACAAAGTTGTACTAAGGTTGAGACACTTATTTTGAGA
CGGAGGGAGTACATTTCTTT--GATGCTTCAAGGGCAAAACTCAAGCTAATGAAATTGATCATTATGTCAAGGTATT-CA
ACCAAAAACAAAACAAA-AATGGTATTCCTGACTACGATGGAGAAAATGCTCAAATTCATT--------AGAACTAACAA
ATGTATATATCAAAACAGCATATGCATTCAGCACATAGATTACCTGGCGATTGAGATCCTTTGCCTTATCAGCATAGATT
CTCGTGTCAGATGTCAACCTACTTGACATTTCACTAACCTCTGCAAAAATAGAAACACGGAATAGTAAACAGTTACTTGC
CAATTTCAAACCTTCCAATGCACTGGAATGAGGTGAAAAGGGAGATATGGGAAGCATCTTGAAAACGCAAAAAAAATACA
TTGTGCACCAGAAGTAAAGCTAAG--GAAATAATGATATAGTATGAAGCTTTTTTAACTTAAGTAGTAAATTAAGACCTA
TTGGAAGGATAACTCCTCGAT
>chr5D_1
TTCGTACGAATTTCATCTGGACTTTGCAATAAATGGAAGGAATCTCTTCAATAATTGGGAAAGATTTAGAGTTCTTGCCC
TCGTAGATCCGATCTTTCAGATCGGTTAGACTTCTTGTTAGTGCATCTTGGTGTTTTTGTTGGTATGGTTTTTTTTTTAG
AACTGGAATTTTTTTCTTGGCACTACGGCGAAGATTGTGATTTGACACTCTGCACTTCCAGGGGA--TCATCACCAGCCC
AAGTCCATTCATTGCTCGATACTTTCCATCTCTTTAG-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------ATGGGC
AAGCCAAGGAGCTCACATGGAATCTCTATCGGTAGTCAGGTTCATGCAAATGCACGAGCGGTGGCGTCGCCGCTGCGGTC
TGATTGCAGTATCTTAGTTGAAGCATTGGTAGAATTTCATCTTTCAAAAAGTTATTACCACGGAGAAGACGTGTCTGAAA
GATTTCATTGCAATTTTTAGTTTC--AACAGCTACTTTGTCTAATTCTTTGAATCTTTGATCATAACCATCGTACCTGTA
ATGGCTGTCGCCTTTTATAATAAACTTATGTACAGGGACTTCTAAAAAAGAAGACTAG-TTTCATCGGTACTACT-----
--------------------------------------------------------------------------------
------------GTACCAGTTAGCTGCCCAATCTTGAGTCTCGCCATTTTTT----GTCTGGGAGCAGGCAAGTCTCGTC
CGAGGACG------------------------GGATGATGGATGCTGCACCGTCCGCCGATCGCCAATAATCAGTGCTA-
--CCAATTCCATGAGGAGTTTGCAGGAAACGGAAAGAATCCCGTCGATAATGGTGACGGATTTCGTGTCCGTGCCGTGCG
TCGTCGCTGTCAGGCAAGGCACGCCAAGCCCGCAAGTGAAAA-------GGGGGGCGTCCACCCCTCCCTTCCCTTCCCC
GCACCCACCCCAACCAAAGCCCACTTCTTTGCCCCCACTTGGCCTTCTTCTCCTTCCCCGCGAGGCGACCGACGCGGAGG
GTAGG----AGGATGTGCGAGGGGCGGCGCCCCGGGCACGCGACCCGGCCGCCGTGGGCGCTGGCGGCGGAGCTGCGGCG
GAGGGAGGCCGCGGCGGACGCGCGGCTGGCGGCGGCGCGGGCGCGGCTGGCCGAGGCGCTGGCGGAGCTGGAGCGGGCCC
GGGCGCGCGCCGCCGAGCTGCAGCGCCGCCTGGAGGAGAACTACGGCAAGCGGCGCCGGCTCAAGCGGGTGGTGGCCGCC
ACCCGCTCCCGGATCCACGACACCCGCGCGCTCCTCCAGGACCACCAGGACCCACACCCGCCGCCGCAGCAGCAGCA---
GCTCCCCGCCGAATCCGATCCCACCTCCTAGGTAGGCCTGAATCGAGCCTGC----------------TGATCAAGCCGA
TTGATCGAAGCGTAAACAGTA----TCTAACATCG-----TCCTC-----TTGATTCGTCTGC-------AGGGAGTCGC
GGCCGGGTGATGTGACGTCCTGCTCCGAAGACC-GATCGGATCGGCAGGCTGCGAGCCTACACAGCTACTGATTTCATTC
CCCTTTCTTCTTGTTTTTTCGCATCGGAGGAAGCTAGC---------TAGTAGCCTGGTAGCTAGCCTCTGCAACATACG
AGCGAGCGGGACGAATGTTCCATGGAACATCAATCAATCAGAAAAAGGCTTGTCATGTCATTCGCGTCGCATACAGTGAC
TGGAATGAATCGCAAGTTATTAGCACCTGGCAGGGACTCACTCTGTAATACAGTA--------GTAGTAATAATGTCTTC
AGTGACTGCACGCATACATGTGCCAAAGTCTTCAGCCCCTGTCGTATCAAACCTC--------TGCTACCGTCACGAAAC
TCTGTG-----------TTGGTCACGCTGAAAGCAGCTGCCCAAGATGCCTGCACTGCTTTTAGACGAGTTGCCTGCGAT
TGCAAGGAAAGAATCTGGCTCATCAGATGCCT------------------------GCATTCCCTGCCACCGCCGTCGCA
AGCCGGGCTCCGACATCTTCACATACCCGAAGGTATAGAGAAGATCATGGTAAGATAAGGTAAGACGGCGATGCTAGAGT
GTACTAAGACG--------------ACTTTCATCGTTGCACACAAGAAAGAATGCTGTCGAACATGCCATATTATGCAGT
CAAG---GGGAGCGATGGAGTACTGTATAGTTTCATCAGCCTGAATTCTTACATGAGTTGACACGACAAA-TATAAATCG
ATCCCGATATCCAAAACTCGACTCTACAGAGCTCTTGTATGTACGGTTCCCAGGGTTCACAAAATCAAGTCCGCCATATG
GTCTATACTACAACCAACGAATTCGTTCACTTCAATAGCTGCTTGTAAGGAGGTGTAAAGGTAGCTTCAAATTACTCGCT
TGAACGGGCAGATACGGGATACAAGTCATCGAAGCATCGCTTGATCCACAATTTCTTTCTCCAGTGTTATAACACAGGCC
GGCCTTCCTTGTTTAGTGGAATCACCATATCTTGTTCTTGGCCCAGAACAGTATTATTACAACCCCAATCACAATGGCAA
CGGGAGCATACTTCCGAATGAAGGCCTGAAACCAAGAAGCAGCACGATCCACATAAAAGTCAAAACACTAAACATAATAC
ATGATGCAATTTTTTTCAGGAATACACAGCTCATGATGCAAATTGGGGACTATGTACAAATATGGATAACAAAGCTAATA
AAGTATCACTTCCGTT-CCAATTATAAGACGTTTTGGATATTTCAATATA--------ATACAGACTGAAATGAGTGAAC
AAACACTAGAACAAG--TCTATATAGATCTGATTCGGGAAAAGTTAGAACATCTTGTAATTTG------AACGGAGGGAG
TAATCATTAAGACTTCCATCAAGGACACAAAGTCTTGACAGACATTGCAATTGCAAATGCTTGCCTTCTAAA---TTATC
AGATTTACCTAGGTAGTAAGAATCGAGAAACACCATTTTGCTAACCACAGGGTATACCTGTAAACTATCAACCTAATAAC
AACAGATGTGTTGGAAGCATATAAACTTACTTTAGTCAAACAAAAATTAGAGAGTATTTTTCATCCATGGAACA------
--------------------------------------------------------------------------------
---------TACATTTCTTTGA--TGCTTTAAGGGCAAAGCTCAAGCTAATGAAATTGATAATTATGTCAAGGTATTTCA
ACAAAAAACAAAA-AAC-AATGATATTCCTGACTACGATGGTTTAAATGCTCAAACT-ATT--------TGAACTAACAA
ATGTATATATCAAAACAGCATATGCATTCAGCACATAGATTACCTGGCGATTGAGATCCTTTGCCTTATCAGCATAGATT
CTCGTGTCAGATGTCAACCTACTTGACATTTCACTAACCTCTGCAAAAATGGAAACACGGAATAGTAAACAGTTACTTGT
CAATTAAAAACCTTCCAAAGCACTGGAATGAGGTGAAAAGGGATATATGGGAAGCATCTTGTAAAACGCAAAAAAATACA
GAGTGCACCAGAAGTAAAGCTAAGATGAAATAATAATATAGTATGAAGCTTTTTAAACTTAAGTAGTAACTTAAGGCCTA
TTGGAAAGATAACTCCTCGAT
>chr5B_2
-TCGTGCAAATTTCATTTGGACTTTGCAATAAATGGAAGGAACCTCATCAATAATTGGGAAAGATTTAGAGGTCTTGCCC
TCATAGAACCGATCTTTCGGATCTGTT-GACTTCTTGTTAGTGCACCTCGGTGCTTTTGCTGGTATGGTTTTTTCTTTAG
AACTGGAATATTTC-CTTGGCACTACGGCGAAGATTGTGATTCGACGGTCGACACTTCCAAGGGA--TCATGACCAACAC
AAGTCCATTCATTGCTCGATACTTCCCATCTCTTTAGGCCTCCTTTGGTTTGTAGAAATCTTATAGGAATTTTATAGGAT
AGGATTTTCAAAGGAAATATCCTATGAAGTCCTTTGGTTTGTAGGAATCTTGTATGAATTTTAAAGGATAGGACTTCCAA
ATGAAAAAATCCTATAAGTCCTTTGGTTTGTAGGAATGGATTCATATTCCTATGTAAGATAGGAATCAATGCTTCATATT
TCAAAGAAAAAAAACATTAGGCTAGACTCAATGGAAAAAATCATATCCTATATGCATCAAATGGCATTGTCTTTCTCTAT
AGGAATTGAGATGCATGTCATATCACTTCCTATGATTTTCCTATTCCTATCCTATGAATCAAAAAACGCCTTAGATGGGC
AAGCCAAGGAGCTCACCTGAAATCTCTATCGGTAGTCAGGTTCATGCAAATGTACGAGCGGTAACGTCGCCACTCCAGTC
TAATTGCAGTATCTTAGTTGAAGCCTTGGTAGAATTTCATCTATCAAAAAGTTGTTACCACGTAGAAGACGTATCCGAAA
GATTTCATTGCAATTTTTAGTTTTAGAACAGTTACTTCGTCTACTTTTTTGAATATTTGATCATAACCATTGTACCCGCA
ATGGCTGTCGCCTTTTAATAAAGTTAT-----CAGGGTCTTCTAAAATAAAAGGACCTATTCCATCAGTACTATAGTTAG
TTGCCCAATCTCAACTCAAAAAAAAAA-----------------------------------------------------
-----------------AGTTAGTTGCCCAATCTTGAGTCTCGCCATTGTTT----GGAAGGTGCGGTGGAAGAGATTAT
ACCCAATAATTGCCGGCAACAGGAAGAGGACAGGATGATGGATGCTTCACCGTCCGCCGATCACCAATAATCAGTCCTA-
--CCAATTCCATGAGGAGTTTGCAGGAAACGGAAAGAATCCCGTCGATAATGGGGAAGGATTTGGTGTCCGTGC-----G
TCGTCGCTGTCAGGCAAAGCACGCCAAGCCCGCAAGTGAAAAGAGGGGGGGGGGGCGTCCACCCTTCG-----CTTCCCC
GCACCCACCCCAACCAAAGCCCACTTCTTTGCCCCCACTTGGGCTTCTTCTCCTTCCCCGCGAGGCGACCGACGACGCGG
AGGAGTCGTAGGATGTGCGAGGGGCGGCGCCCCGGGCACGCGACCCGGCCGCCGTGGGCGCTGGCGGCGGAGCTGCGGCG
GAGGGAGGCCGCGGCGGACGCGCGGCTGGCGGCGGCGCGGGCGCGGCTGGCCGAGGCGCTGGCGGAGCTGGAGCGGGCCC
GGGCGCGCGCCGCCGAGCTGCAGCGCCGCCTGGAGGAGAACTACGGCAAGCGGCGCCGGCTCAAGCGGGTGGTGGCCGCC
ACCCGCTCCCGGATCCACGAGACCCGCGCGCTCCTCCAGGACCGCCAGGACCCG---CCGCCGCCGCAGCAGCAGCAGCA
GCTCCCCGCCGAATCCGATCCCACCTCCTAGGTAGGCCTGGCCCTC-TCCTCGATTAAGCCCTCGTCGTGATCAAGCCGA
TTGATCGAAGCGTAAACAGTACTTATCTGACATCGTCCTCTCCTC-----TTGATTCGTCTGC-------AGGGAGTCGC
GGCCGGGTGACGTGACGTCCTGCTCCGAAGACCCGATCGGATCGGCAGACTGCTGGCCTACACAGCTACTGATTTCATTC
CCCTTTCTTCTTGTTTTTTCGCATCGGAGGAAGCTAGCTAGTAGGAGTAGTAGCCTGGTAGCTAGTCTCTGCAATATACG
GGCG----GGACGAATGTCCCATGGAACATCAATCAATCAGAAAAAGGCT--TCATGTCATTCGCATCGCATACAGTGAC
TGAAATGAATCGGAAG---TTAGCACCCGGCAGGGACTCACTCTGTAATACAGTAC-----TAGTAATAATCATGTCTTC
AGTGACTGGA-GCATACATGTGCCAAAATCTTCAGCTCCTGTCGTATCAAACATACGAGTATATGCTACCGTCACGAAAC
CCTGCTATGTCGTTCATTTGGTCACGCTGAAAGCAGCTGGCCGTGATGCCTGCATTGCTTTTAGACGAGTTGCCTGCGAT
TGCAAGGAAAGAATCCGGCTCATCGGACGCAACTCTCACCAATGACTGGCGTAATAGCTTTCCCTGCCACTGCCGTCGCA
GGCCGGGCTCAATAATCTTCTCATACCCAAAGGTATAGAGAAGATCATG-------------------------------
---CTAAGATG--------------ACTTTCATCGTTGCACACAAGAAAGAATGCTGTCGAACATGGCATATTGTGCAGT
CAAGGGCGGGAGCGACGGAGTACTGTATAGTTTCATCAGCCTGAATTCTTACATGAGTTGACACAACAAAATATAAATCG
ATCCCGATATCGAAAACTCGACTCTACAGAGCTCTTGTATGTACGGTTCCCAGGGTTCACAAAATCAAGTCCGCCATATG
GTCTATACTACAACCAACGAATTCGTTCACTTGAATAGCTGCTTGTAAGGAGGTGTAAAGGTAGCTTCAAATTACTCGCT
TGAACGGGCAGATACGGGATACAAGTCATTGAAGCATCGCTTGATCCAGAATTTCTTTCTCCAGTGTTATAACACAGGCC
GGCCTTCCTTGTTTAGTGGAATCACCATATCTTGTTCTTGGCCCAGAACAGTATTATTACAACCCCAATCACAATGGCAA
CAGGAGCATACTTCCGAATGAAGGCCTGAAACCAATAAGCAGCACAGTTCACATAAAAGTCAAAACACTACACATAATAC
ATGATGCAAATTCTTTTAGAAATACGCAGATCGTGATGTAAATTGGGGACTATATACAAATGTGGATAACTAAGCTAATA
AAGTATCACCTCCATTCCCAATTATAAGATGTTTTGGATATTTCAATATAGACTATACATACAGCCTGAAATGAGTGAAC
AAACACACTAGAACACATCTATATACATCTGATTCAGGAAAAGTTAGAACATATTAT----TAATTCGAAAAGGAGGGAG
TAATCATTAAGACTTCCATCAAGCACACAAAGTCTTCACAGGCACTGCAACTGCAAATGCTTGCCTTCTAAAAATTTATC
AGATTTACCTAGGTAGTAAGAATCGACAAACGCCATTTTGCTAACCACAGTGTATGCCTGTGAATTATCAACCTAATAAC
AACAGATGTGTCGGAAGCATATAAACTTACTTTAGTCAAACAAAAATTAGAAAGTATTTTTCATCCATGGAACA------
--------------------------------------------------------------------------------
---------TACATTTCTTTGAGATGCTTCAAGGGCAAAACTCAAGCTAATGAAATTTATAATTATGTCAAGGTATTCAA
CAAAAAATGAAAA-AAAAAATGACATTCCTGACTACGATGGAGAAAATGCTCAAATACATTTTTAGTTTTGAACTAACAA
ATGTATAT-TCAAAACAGCATATTCATTCAGCACATAGATTACCTGGCGATTAAGATCCTTGGCTTTATCAGCATAGATT
CTCGTGTCAGATGTCAACCTACTTGACATTTCACTAACCTCTGCAAAAATAGAAACACGGAATAGTAAATATTTACTTGC
CAATTTCAAACCTTCCAATGCACAGGAATGAGGTGAAAAGG---ATATGCGAAGCATCTTGTAAAACGCAAAAAAATACA
GAGTGCACCAGAAGTAAAGCTAAG--GAAATAATAGTATAAGAC----------------AAGTAGTAAATTAACGCCTA
TTGGAAGGATAACTCCT----
>SNPs
---------------------------------------------------------S----------------------
-----------------S----S--------------------------S------------------------------
---------S-----S-S-SSS-----S-----------------S------------------SSS-------------
----S------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S----------S-------------S-S------S--------S--------------------------------
---S----S-------------S------S-S---------------------------SS-------S-----------
-----S----------------------------------------S-S-S-----------------------------
----------------------------------------------------S-SS--S------SS---S---SSS-SS
S-SS-SSSSS-SS-SSSS-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS----S-----------------S-----------------SSSS------------------S--S--
S------------S------------------S------S------------------------------------S--S
SS-----------S--------------------------S---------------------------------------
-----------------------------------------------------S------S-------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--S---------------------------------
---------------------------------------------SSSSS----------SS-SSSSSSS----------
---S-----------S---------S----------S-------------------------------------------
----------S-S------SSSSSSS------------------------------S-----------------------
----------S--------------S------------------------------------------------------
--------------------S-----------------------------------SSSSS--------------S----
S-----------------------S--------------------S----------------------------------
-----------S----S----SSS---------S----------------S-----S--------S--------S-----
---------------------------------S-----------------------------S----S-----------
------------------S-----------S------------------S-S-------SS-------------------
----S-S-S-SSSSSSSSSSSSSSS-----------S---------S----------------------S----------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
------------------------S------------S----------S-------------S--------S--------
--------------------------------------S-----------------------------------SSSSSS
-----------------S--------------------------------------------------------------
-S-----------------------------------------------S-----S------------------------
------S--S----------------------------------------------S------------SS---------
------------------------------S--------------------------------S----------------
----------------------------------------------------------S-S-------------------
--------------------------------------------------------------------------------
----------S--------SS-SSS--S-----------------------------S------------S---------
-----S--------------------------------------------------------------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS---------------------------------------------------S-------------------
--S----------S--------S----------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S-----------------S---SSSS-----------
SS--------------------------------S-------------------S--------------------S----
---------------------
>forward_245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GGTCATCACCAGCCC
AAGTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_1936
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AGTCCTGCTCTGAAGACCGA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>forward_1905
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TCCTCTTGATTCGTCGTCCG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_2955
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GGCCGG
CTTCCTTGTTTAGT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>forward_1957
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GTCCTGCTCTGAAGACCGAC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_2956
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCCGG
CTTCCTTGTTTAGTAG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>forward_2630
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AATGCTGTCGAACATGGCAC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
>reverse_3468
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TCCATTTTGCTAACCACAGGGT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
