>input_sequence_46751
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-----------------------------------------------ATGACTTCGCCGTCCGCCCCCGTCCTCCACCGC
CTAATCCTGCCCATACCCTTCGTACCCTCCTGCCGCGTCTCGCCCCGCACCCCCGCATCCGTCGCGGCGCAGCCGTCGCC
GTCGCCGAGGAGAATATGGCGCCTGCCCCTGCTCCGATCGTCGCTGCCTCCCGAAGGTGCGCGCGCGTCGCCACGCACCT
ACAATATTCCCGGTTTCCTTCCGCACATCTGACGCGCATCCGTCGCCCTAGGATCCCCGGCGGAGCTTGTAGCAGAGGAC
TCCAAGTTCGTACCGCTTAACGCCGAGGACCCGATGTACGGACCGCCGGTGAGTCGCCACCAGTTGCGCGTTACAAGCGA
GTGCTATTCCACGCCCCCGCTGCATAT----ACATATAGCTTCTGTTGCCGGTGAAATATAGTGATTTTGTTTACTTCGA
AATGCTGAGATCGATGTCACTGAATTGTGACCCCATTTCAGGCAATATTGCTCATCGGATTCGATAAAAGCGAGGCCGTC
AAGGTATTCGGTTCACAGGATTCTTAGAACCTGCGTGATGCTTGCATGCCGATATTGACAGATAGAACGCTAATTTACAA
GTAATTCCTGTGAATTTTCGTAACTAGTGCAGATTCAGGAGTTCCTGAAGGAGCTCGACGGTGATTTCCTCAAGGTAATT
ATGTTTCGCGCCTGCTGTAACAGAAGTTTACCGAGAAAAGATCAGGTTTG---GTACATTTAGCTGCAGAAGAACAGAAA
ATGAACGAAATAGGAGTCTTCTCCACTGTTAAAAAG-TAGGCGTCTTCTAACGG--AGTAAGTAATAAGATCAAGAAATG
AGTCTTGAAAAAAGAC-ACTGAAATGTAGAGTAGCCAAAGCTTACTCTTATTCAGAAACAAACGTGTGAGATGAAAATAC
AGTAGAAAGTTTGTCATACGATCTTGAAAGTTCAG-CAAACTTGTTCATGGGTCAGGTGATTCGTTGTACAGAAGAAATG
ACGAAACAAACTTTGTGGGATGCCATGCACACTGAGCAGCCTAATGTAGAAGCTGTCAAGGTAACAACATTCACAAACAT
GACATTTTCAGTCTTTACCGCGCTTACTTACACTCTTATGCTGAAATAACAGCCTTGCCAGATGCCTTCAATCACTTCTT
TCGTAGCCTTAAATTTTACCATCGATCGCTAGTTAACATGTGTGTTTGGTTCACAGATTATGAAATCTCCGCAAAGAATA
TGCATCTTTTCTGGTCTGACTGGTGAGGAGATGATGATGTTCATCAACGCCTACCCAGAAACAGGTACTAGTTCCTTAGT
CCTAGGCCAAAGGAAATTCAGAAACTGTAAGAGAAAAAACAGCGTCTTTCCACACGCACAAACAAAAGACTCTATGACGA
AATAAATTATA-----------------------------------------------TTGCTCACTGTTCAGGGTTGGA
ACAAGCCGCTTTCGCGGCACTTGTTCCCAACAGCGGAGAGAAGGTTCTTGCTGAGGTGATCGAGGAAATAATGGGTGACC
ATGAGATGCTGGTTTGTTGCTTCTGACTGCTGCCAACTTCTGTGTTCTTCTTCTGCCTTCAG---TACCTGCAGACCGAA
TGAGTTTTTTGCTTTCTTGCTTCACTACCTGCAGACGGGAAAGAATTCAGCATGA-------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr1A_1_TraesCS1A01G205600
TGCAGATGGAATAAGGTTCTCCCCATCCAGCCCCCATTCTGAAGATATTTCTAGCATCGTCGGAGGGCGTGTGGAGGTTT
GTCTCCGACGGATCTCATAGATCTCATGGGATTCAGTCGGGATTTGTCTTAGGTGGATCCACGTGGATCCAGTCTTCGTT
CTTCTGTGTTCGTGTGTCTACATGATGGATACTTCTGATCTATGTTTCTCTTCATCGGTGGCGGTTTGTTGTTCTGATGC
GTTGGTCCTATGGGGCTTTAGTACGATTACTTTCCGACTGTCTACTACAACAATATTTGCCCAAGTCTGATGTG-GAGGG
GCGATCACG-CCGATGCGCCTTTGGCTCGCTCCAGTGCCTGTAGTCATTGCTAGGTGGTCTATGAATCTGAATATTTTTT
TTATTTCTGATGCTCTTTGTACTATCTTGACCGTTAATAAATAGATTGGAGTTTTTCTCGTAAAGAAAAGAAAAGTCAGA
TCCTCTAAACCCGTCGTAAATATTTAGGTGATGAGTTTTAAAGATCTATTTGGTTGGACATCTCGCAGTATGCAGAAAAA
TTCACAGCCGGTCTGAGTTTTACTAGGCAAAAGTCATTTTTCTGACATGTGGATGTAACAATATCATAAAATGAACCGTT
GACGAAAGTTTTTTACTCGGTTGATTTTTTTGTGTAGCGCACGACAACTAGACGCCACATTACACTGTGCAGTG-CTGGC
TCTTATGCCCTACACGCCTAGTCAACCTACATTGTGTGGTACCACTAGTGCGACACCTACACCGTATAGTGTGGCGCCTA
ACTCTCAGACGTTACACATTGACTTGGCATTTTTCAGGTTGATGG-----------------------------------
------------------------------------------------TTTATTTTGTGATATTTTTTCGCGCACGGAGT
CAAATCTGTTGTTTTTTCCGTTTTGCTAGACGTGGCTTGAGACGAAACCCTGACGGAACATAGACTACGTACAAAACCAC
AC-AACACAGAAGGATAACGTCGCCGTCGTCCTCGCCGCCGGCGCCGATGACTTCGCCGTCCGCCCCCGTCCTCCACCGC
CTAATCCTGCCCATACCCTTCGTACCCTCCTGCCGCGTCTCGCCCCGCACCCCCGCATCCGTCGCGGCGCAGCCGTCGCC
GTCGCCGAGGAGAATATGGCGCCTGCCCCTGCTCCGATCGTCGCTGCCTCCCGAAGGTGCGCGCGCGTCGCCACGCACCT
ACAATATTCCCGGTTTCCTTCCGCACATCTGACGCGCATCCGTCGCCCTAGGATCCCCGGCGGAGCTTGTAGCAGAGGAC
TCCAAGTTCGTACCGCTTAACGCCGAGGACCCGATGTACGGACCGCCGGTGAGTCGCCACCAGTTGCGCGTTACAAGCGA
GTGCTATTCCACGCCCCCGCTGCATAT----ACATATAGCTTCTGTTGCCGGTGAAATATAGTGATTTTGTTTACTTCGA
AATGCTGAGATCGATGTCACTGAATTGTGACCCCATTTCAGGCAATATTGCTCATCGGATTCGATAAAAGCGAGGCCGTC
AAGGTATTCGGTTCACAGGATTCTTAGAACCTGCGTGATGCTTGCATGCCGATATTGACAGATAGAACGCTAATTTACAA
GTAATTCCTGTGAATTTTCGTAACTAGTGCAGATTCAGGAGTTCCTGAAGGAGCTCGACGGTGATTTCCTCAAGGTAATT
ATGTTTCGCGCCTGCTGTAACAGAAGTTTACCGAGAAAAGATCAGGTTTG---GTACATTTAGCTGCAGAAGAACAGAAA
ATGAACGAAATAGGAGTCTTCTCCACTGTTAAAAAG-TAGGCGTCTTCTAACGG--AGTAAGTAATAAGATCAAGAAATG
AGTCTTGAAAAAAGAC-ACTGAAATGTAGAGTAGCCAAAGCTTACTCTTATTCAGAAACAAACGTGTGAGATGAAAATAC
AGTAGAAAGTTTGTCATACGATCTTGAAAGTTCAG-CAAACTTGTTCATGGGTCAGGTGATTCGTTGTACAGAAGAAATG
ACGAAACAAACTTTGTGGGATGCCATGCACACTGAGCAGCCTAATGTAGAAGCTGTCAAGGTAACAACATTCACAAACAT
GACATTTTCAGTCTTTACCGCGCTTACTTACACTCTTATGCTGAAATAACAGCCTTGCCAGATGCCTTCAATCACTTCTT
TCGTAGCCTTAAATTTTACCATCGATCGCTAGTTAACATGTGTGTTTGGTTCACAGATTATGAAATCTCCGCAAAGAATA
TGCATCTTTTCTGGTCTGACTGGTGAGGAGATGATGATGTTCATCAACGCCTACCCAGAAACAGGTACTAGTTCCTTAGT
CCTAGGCCAAAGGAAATTCAGAAACTGTAAGAGAAAAAACAGCGTCTTTCCACACGCACAAACAAAAGACTCTATGACGA
AATAAATTATA-----------------------------------------------TTGCTCACTGTTCAGGGTTGGA
ACAAGCCGCTTTCGCGGCACTTGTTCCCAACAGCGGAGAGAAGGTTCTTGCTGAGGTGATCGAGGAAATAATGGGTGACC
ATGAGATGCTGGTTTGTTGCTTCTGACTGCTGCCAACTTCTGTGTTCTTCTTCTGCCTTCAG---TACCTGCAGACCGAA
TGAGTTTTTTGCTTTCTTGCTTCACTACCTGCAGACGGGAAAGAATTCAGCATGAAGGTAGTATGTCTCAGGTAGTGACC
CGTCCGCAGAGACAAAATCAGGCAGCATTGAACTGATCCTCAAATGGTCTTTTGAAATCACCCGCTCCAAGTGATCCACC
ATGT-AAATGTCAATCCTTCGACTCTCTCCATCTGCTGGTAAATGTTAATC-----------------------TCTGGA
GAAGTTGAGCAGCTTGTACATTTGAAACTGAGATGAACTGAGATGCAAG----------AGATCAATGTACATTTGAAAC
TGAGATGAACATTACTGAGACTTTTCTTCTTGACATAACCATGTAATTAAGATCCTTTTTGTTGGAAGCACTTAATTCTT
GGACAGTTCT-CTGTTGTTGGATTAAGGTACAGAATTCCTCAGCATGCTTATCCACACACCACATTTATTCCG-TTTACT
CCATGAGAAGGATGGTACTCTGCATCCTTTGCTTCAACTGTGACGCTACGGTGAAATGAATAATTCTGCTGTC-------
-------------------------AACAATGAACAATACTATTTTCTCTCTTGAAGTAGTACGGATGAGCATCCTGGCA
TGTGAGAAGTTTGTTTAATCATCCGTTTAAGACAATTATATTATGAGTTATGCGGTAAG-GTTTGCTATCTCTTTGTATA
TACAAGTCCTACTTGTCGGCAAAGTGATCAGAAAAACAATTAACCAAATGGTAGAGAAGATAAAATAGCAAGCCTTGTTC
TTGTCGCCTCTCTGGCTGTGCCTCTGCACCCCAGGATGGTTGAGGAAAGGGGGTGGATGATG------------------
---CTATATTCTCAAGTAG--------------------------------CACTCATGATCAAGGGTTGTTTTTCACAC
ACCAATAATCAAAAATTTAAGTTGGGCAATATTGTTCTCTATAGCTGCCTAAGATAACACCTGAATCATGAGACGGGATT
TTCGTTTTCCTCTCCGTTTCTTCTCTTGATTGATGCTCAGTCACTGGGTACCCTGTGAATGTTTTATTTCTCCCAGTGCG
GCGTTTTTTTTAAAACAAGGCAAAAGATTTGCCATTTTTATTAATTAAGAAGAGGTT
>chr1D_1
TGCAGATGGAATAAGGTCCTCCCACCT-AGCCCCTGTTCTGATGGTGTTTCTAGCATCGTTGGAGGGCGTGTGAAGGTTT
GTCTCTGACGGATCTCGTAGATACCATGGGATTCGGTCGGCGTTTGTCTTAGGTGGATCCACGTGGACCCGGTCTTCGTT
CTTCTATATTCGTGTGTCTACAGGATGGATACTTCTGATCTATGTTTCTCTTCATCGGTGGTGG-TTGTTGTTCTGGTGC
GTTGGTCCTATGGGGCGTTAGCATGATGATTTTCTGACTGTCTACTACAACAATGTTTGCCCAGCTCCGATGTGAGAGGG
GCGATGACGCCCGATGCGCCTTTGGCTCGCTTCAGTGTATGTAGTCGTCGCTAGGTGGTCTATGAACCGGAATGTATTTT
TTACTTCTGATATTCTTTGTACTATCTTGACGGTTGACGAATAGATTGGAGTTTTTCC-------AAAAAAAAGGCCGGG
TCCTCTAAACCCGTCGTAAATTTTTAGGTGACGAGTTTTAAGGATCTATTTGGTTAGACGTCTCGGGCACCGCAGCAAAA
TTTACAGCCCGTCTGAGTTTTGCTAAGCAAAATTCACTTTTCTAACCTGTGGACGTAACAATATCACAAAATGAACCGGT
GACGAAATTTTTTCATCCGGCTGATCTTTTTGTGTATCGCCAGACAGTTAGACACCACATTACACTGTGCAGTGTCTGGC
TCCCACGCCCTACACGCCTAGTCAACTACAA-TGTGTCGTGCCACTAGTGCGACGCTTACACTGCATAGTGTAGCGTCTA
GCTCTCAGGCGTTACACATTGATGTAGCATTTTTCAGGCAGTCTGGAGTGCGATGCCGGCTAGACGTGAGCGTTGTACAG
TGTAGTGTGTCTCCTAACGGGCGCTACACAAAAGGTCAGCCGGATGAATTTTTTTCGTGATATTTTTTCGTCCACGG-GT
CAAATTTGTTGTTTCTGCCGTTTTGCTAGACGTGGCTTCAGACGAAACCCTGACGGAACATAGACCACGTACAAAACCAC
ACAAACACACAAGGATAACGTCGCCGTCGTCCTCGCCGCCGGCGCCGATGACTTCGCCGTCCGCCCCCGTCCTCCACCGC
CAAATCCTGCCCAGACCCTTAGTACCCTCCTGCCGCGTCTCGCCCCGCACCCCCGCATCCGTCGCGGCGCAGCCGTCGCC
GTCGCCGAGGAGAATATGGCGCCTGCCCCTGCTCCGATCGTCGCTGCCTCCCGAAGGTGCGCGCGCGCCGCCACGCACCT
GCAATATTCCCGGTTTCCTTCCGCACATCTGACGCGCATCCGTCGTCCTAGGATCCCCGGCGGAGCTTGTAGCAGAGGAC
TCCAAGTTCGTGCCGCTGAACGCCGAGGACCCGATGTACGGACCGCCGGTGAGTCGCCGCCAGTTGCGCGTTACAAGAGA
GTGTTATTCCACGCCCCCGCTGCATAT----ACATATAGCTTCTGTTGCCGGTGAAATATAGTGATTTTGTTTACTTCGA
AATGCTGAGATCAGTGTCACTGAATTGTGACCCCATTTCAGGCATTGTTGCTCATCGGATTCGATAAAAGCGAGACCGTC
AAGGTATTCGGTTCACAGGATTGTTTGAACCCGCGTGATGCTTGCATGCCGATATTGACAGATAGAACG-TAATTTACAA
GTAATTCCTGTGAATTTTCGTAACTAGAGCAGATTCAGGAGTTCCTAAAGGAGCTGGACGGTGATTTCCTCAAGGTAATT
AAGTTTTGCGCCTGCTGTAACAGAAGTTTACAGAGAAAGGAACAGGTTCG---GTACATTTAACTGCAGAAGAATAGAGA
TTGAAC-AAATACGAGTCTTCTCCACCGTTAAAAAAATAGTCGTCTTCTCGATTACAGTAAGGAATAAGATCAAGAAATG
AGTCTAGAAAAAAAACCACTGAAATG--GAGTAGCGAAAGCTTACTCTCATTCAGAAACAAACATGTGAGACGAAAATAC
TGTAGAATGTTTGTCATGCGATCCTGATAGTTCAGCCAAACTTGTTCTTGCGTCAGGTGATTCATTGTACAGAAGAAATG
ACGAAACAAACTTTGTGGGATGCTATGCACACTGAGCAGCCTAATGTAGAAGCTGTCAAGGTAACAACACTTGCAAACAT
GACATTTTCAGTCTTTACTGCCCTTACTTACACTCTTGTGCTGAAATAACAGCCTTGCCAAATGCCTTCAATCACTTCTT
TCATAGCCTTAAATTTTACCGTGGATCGCTAGTTAACATGCGTGTTCGGTTCACAGATTATGAAATCTCCGCAGAGAATA
TGCATCTTTTCTGGTCTGACCGGTGAGGAGATGATGATGTTCATCAACGCCTTCCCAGAAACAGGTACTAGTTCCTTAGT
CCTAGGTCAAAGGAAATTCAGAAACTGTAAGAGAAAAAACAGCGTCTTTCCACACACTCAAACAAAAGACTGTGTGACGA
AATAAATTCTAGTGTGGAAGCTTTATCTCAGGCCGTGTGTCATCAAACTGACGAGCTGTTGCTCACTGTTCAGGGTTGGA
ACAAGCCGCTTTCGCAGCACTTGTTCCCAACAGCGCAGAGAAGGTTCTTGCTGAGGTGATCGAGGAAATAATGGGTGACC
ATGAGATGCTGGTTTGTTGCTTCTGACTACTGCCAACTTCTGTGTTCTTCTTCTGCCTTCAG---TACCTGCAGACCGAA
TGAGTTTTTTGCTTTCTTGCTTCACTACCTGCAGACGGGAAAGAATTCAGCATGAAGGTAGTATGTCTCAGGTAGTGACC
TGTCCGCAGAGACAAAATCAGGCAGCATTGAACTGATCCTCAAATGGTCTCTTGAAATCGCCCGCTCCAAGTGATCCACC
GTGT-AAATGTCAATCCTTCGACTGTCTCCATCTGCTGGTAAATGTTAATC-----------------------TACTAG
CTACTGTTTCAAACCCGC----------------------AGCTGCAAGCCCTGCAGCTAGATCACTGTTCATTTGAAAC
TGAGATGAACATTACTGAGGCTT---TTCTTGACGTAACCATGTAATTACAATCTTTTTTGTTGGAAGCACTTAATTCTT
GGACAGTTCTTCTGGTGTTCGATTAAGGCACAGAATCTCTCAGCATGCCTATCCACATACAACTTTTATTCCTTTTTACT
CCATGAAAAGGATGGTACTCTGTATCCTTTGCTTCAACCGTGGTGCTACAGTGTAGTGAATAATTCTACTGTCTACAATG
AATAATACTATATTTTTTTGCGGGAAACAATGAATAATACTATTGTCTTTCTTGAAGTAGTACGGATGAGGATCCTGGCA
TGTGAGAAGTTTGTTTAATCATCTGTGTAAGACAATTATATCATGAGTTATGCGGTAAGAGTTTGCTATCTCTTTGTATA
TACAAGTCCTACTTGGCGGCAAAGTGATCTGAAAACAATGTAACCAAATGGTAGAGAAGATAAAATAGCAAGCCTTGTTC
TTGTCGCCTCTCTGGCTGTGCCT------CCGAGGAGGGGTGAGGAAAGGGGGTGGATGGTGGTTTCTGGTGTGCA---G
ATACTATATTCTCAAGTAG--------------------------------CACTCATGATCAAGGGTTGTTTTCCATAC
ACCAATAATCAAAAAATTAAGTTGGGCGATATTGTTCTCTATAGCTGTGTAAGATAACACCTGAATCAT-----------
--------------------------------------------------------------------------------
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>chr1B_899
--------------------------------------------------------------------------------
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------------------------GCTAGACGTGGCTTCAAACGAAACCCTGACGGAACAGAGACCACGTACAAAACCAC
AC-AACACAGAAGGATAACGTCGCCGTCGTCCTCGCCGCCGGCGCCGATGACTTCGCCGTCCGCCCCCATCCTCCACCGC
CAAATCCTGCCCAGACCCTTCGTACCCTCCTGCCACGTCTCGCCCCGCACCCCCGCATCCGTCGCGGCGCAGCCGTCGCC
GTTGCCGAGGAGAATATGGCGCCTGCCCCTGCTCCGATCGTCGCTGCCTCCCGAAGGTGCGCGCGCGTCGCCACGCACCT
GCAATATTCCCGGTTTCCTTCCGCACATCTGACGCGCATCCGTCGTCCTAGGATCCCCGGCGGAGCTTGTAGCAGAGGAC
TCCAAGTTCGTGCCGCTGAACGCCGAGGACCCGATGTACGGACCGCCGGTGAGTCGCCGCCAGTTGCGCGTTACAAGCGA
GTGCTATTCCACGCCCCCGCTGCATATGGAAACATATAGCTTCTGTTGCCGGTG-AATATAGTGATTTTGTTTACTTCGA
AATGCTGAGATCAATGTCACTTAATTGTGACCCGATTTCAGGCAATATTGCTCATCGGATTCGATAAAAGCGAGACCGTC
AAGGTATTCGGTTCACATGATTCTTAGAACCTGCGTGATGCTTGCATGCCGATATTGACAGATAGAACG-TAATTTACAA
GTAATTCCTGTGAATTTTCGTAACTAGTGCAGATTCAGGAGTTCCTGAAGGAGCTCGACGGTGATTTCCTCAAGGTAATT
AAGTTTCGGTCCTTCTGTAATTGAAGTTTACCAAAAATGAAACATGTTTGGTAGTACATTTTACTGCAGAAGAACAGAGA
TTGAAC-AAATAGGAGTCTTCTCCACTGTTGAAAAAATAGGCATCTTCTCGAGT--AGTAAGTAATAAGATCAAGAAATG
AGTCTAGAAAAAACTCCACTGAAATG--GAGTAGCGAAAGCTTACTCTCATT-AGAAACAAACAAGTGAGATGAAAATAC
TGTAGAATGTTTGTCATGTGATCCTGATAGTTCAGCCAAACTTGTTCTTGCGTCAGGTGATTCATTGTACAGAAGAAATG
ACGAAACAAACTTTGTGGGATGCTATGCACACTGAGCAGCCTAATGTAGAAGCTGTTAAGGTAACAACACTTGCAAACAT
GACATTTTCAGTCTTTACTGCGCTTACTTACACTCTTGTGCTGAAATAACAGCCTTGCCAAATGCCTTCAATCGCTTCTT
TCATAGCCTTAAATTT-ACCGTCGATCGCTAGTTAACATGCTTGTTCGGTTCACAGATTTTGAAATCTCCACAAAGAATA
TGCATCTTTTCTGGTCTGACCGGTGAGGAGATGATGATGTTCATCAACGCCTTCCCAGAAACAGGTGCTAGTTCCTTAGT
CCTAGGTCAAAGGAAATTCAGAAACTGTAAGAGAAAAAACAGCGTCTTTCCACACAAACAAACAAAAGACTGTGTGACGA
AATAAATTCAATTGTGGATGCTTTATCTCAGGCAGTGTGTCATCAAACTGACGAGATGTTGCTCACTGTTCAGGGTTGGA
ACAAGCCGCTTTCGCAGCACTTGTTCCCAACAGCGCAGAGAAGGTTATTGCTGAGCTGATCGAGGAAATAATGGGTGACC
ATGAGATGCTGGTTTGTTGCCTCTGACTGCTGCCAACTTATCTGTTTTTCTTCTTCTGACTTTGCTACCTGCAGACGGAC
TGAGTTTTTTGATTTCTTGCTTCACTACCTGCAGACGGGAAAGAATTCAGCATGATGGTAGTATGTCTCAGGTAGCGATC
CGTCCGCAGCGACAAATTCAGGCAGCATTGAACTGATCCCCAAATGGTCTCTTGAAATCACCCGCTCCAACTGATCCGTC
GTGTAAAATGTCAATCCTTCGACTGTCTTCATCTGCTGGTAAATATTAAATATCTGGAGAAGTTGGGCAGCTTGTACTAG
CTACTTTTTCAAACACAC----------------------AGATGCAAGCCCTGCAACTAAATCAATGTACATTTGAAAC
TGAGATGAACATTACTGAGACTT---TTCTTGACGTAACCATGTAATTAAGATCTTTTTT-TTGGAAGCACTTAATTCTT
GGACAGTTCTTCTGGTGTTGGATTAAGGTACAGTATG-------------------------------------------
-------------------------------------------------------GTGAATAATTTCTACTGTATATAG-
------------------------------TGAACAGTACTATTATCTTTCTTGAAGTAGTACGGATGAGCATCCTGGCA
TGTGAGAAGTTTGTTTAATCATCTGTGTAAGACAATTATATTATGAGTTATGAGGTAAGGGTTTGCTTTCGCTTTGTATA
TAAAAGTCCTAGTTGGCGGTAAAGTGATCCGAAAATAATGTGACCAAATGGCAGAGAAGATAAAATAGCAAGCCCTGTTC
TTGTCGCCTCTCTGGCTGCACG-------CCGAGGAGGGGTGAGGAAAGGGAATGGACGGTGGGTTCGGGTGTGCACATG
ATGCTATATTCTAAGTACTCCCTCCGTAAAGAAATATAAGAGTGTTTAGATCACTCATGATCAAGGGTTGTTTTTCGTAC
ACCAATAATCAAAATTTTAAGTTGGGCAATATTGTTCTCTATAACTGCCTAAGATAACACCTGAATCAT-----------
--------------------------------------------------------------------------------
---------------------------------------------------------
>SNPs
-----------------S-----SSSSS------SS------S-S-S-------------S------------S------
-----S----------S-----SS----------S-----SS-------------------------S--S---------
-----S-S--------------S--------------------------------------S--S-----------S---
----------------S----S-S---S-S----S-------------------S--------SS--S------------
-----S-------------------------S-----SS-------S-S-----------------S-S----S-S----
---S-------SS------------------S---S-SS------------------SSSSSSSS----S---S-S-S-S
---------------------S---------S---------S-------------S---S-----SSSSSS----S----
--S------S-----------S---S------S---S------S--S------S------------S-----------S-
-------S-----S-SS---S----S----------S---SS----SS-----S--------------------------
--SS-S--------------------SSSS-S-----S--S-------------S-S-----S-S-------S---S---
S-------S-------------SS-S------------SS-SSS------------------------------------
---------------------------------------------------S---S--------------SS-----S--
-----S--------S-S---------------------S--------------------------S--------------
--------------------------------------------------------------------------------
-S-----------S------------------------------------------------------------------
--------------------------------------------------------------------------------
S--------------------------------------------S----------------------------------
-----------S-----S----------------------------------------S---------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------S-----
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-S------------------------------------S--S--------------------S---------------S-
S-----S----------------------------S-------------SSS-S--------------------------
-----S-------S------------SS-------S------------S--------------S----------------
S------S---------S-----S---S-------------------S--S------------S----------------
-----------------------S---------------------------------------------S-SS-------
------------------S------------------S----------------------S-------------------
--S-----------------S-------------------S-----S---------------------------------
--------------------S-------------------------------S---------------------------
------S------------------------------------------------S---------------S-S------
--------S-----------------------------------------------------------------------
---------------S-------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
S-----------------------S--------------------------------------------------SSSSS
SS-S--SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------
-----------------------SSS--------S-------------------S-------------------------
--------------S---------------------SS----------S--------S--S--S--------S-------
------S---------------S---------------S---SS-----S---S-S-----------S------------
--------------------------------------------S---S-------------------------------
-----------------------S--S-----------------------------------------------------
---------------S-------------S-----SS-SS----------------------------------------
-----------------------SSSSSS--S----S--S-------------------S--------------------
-----------------------------------------------------------------------------S--
---------------------------------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_777
--------------------------------------------------------------------------------
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-------------------------------------GGTACCACTAGTGCGACACC-----------------------
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>reverse_2104
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------CATGCACACTGAGCAGCCTA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>forward_801
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CCGTATAGTGTGGCGCCTA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2957
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TGGA
GAAGTTGAGCAGCTTGT---------------------------------------------------------------
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