>input_sequence_46733
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--------------ATGGGCGGACCTTTGGTAGACTGCAGTGCTGAAGGTGTGAGCAGCAGCTCATGTCTCAGCCGCAGC
ACCTGCGGAAAAGCAGGTTTTGAGCACAGCTCTTGTGCTCTCCCTGAAGATGAAAAGTTTGAAGCTGGAATAGCATGTGT
GAAAGATGATTTGGTTGTCAAGGAAATCAGTTTGGCTCTTGCTGAGGTGATGCGTGTCTATGATGACAATGATGATGAAG
AGACAGATCTGAGTGAAGACTCTGACGAAAATGGGGATTCACTTTCTGTAGAATCAGATTCGGCTGATGATTTGGTTGTT
ATTGACACTGAAATGGTCACATCGTCAGCCTTCACTGCCGGGAATGCGTCTGAATCATCAACTGGAAATTCAGAGAATGG
AAATTTCTCAACCAATGTAAGTATTTGATTGCAGTACACGCATGGACTCTTCCTTATCTGTCTTATCTTGCTATATCGTC
AGAGTGTTTGTTTTGTTATCTTTGTACCAAAATATTTGTCAGTAAGCCA-----------GCTCTCCATGTAAAAATGTG
CTAGAAATGTTGGACGCTTAATTTTTCATATATCAACTCTTGTTTCTTATAACAAATTATTACTTGCCAT---TTAGGAT
TTTGGGTAGCTAAATATTATTCCGCTCTTATGCGTCACTGCTCCTTTTTCTACCTGTTAGGAGGTATCATAGCTTGCCTT
TGTTTTGGTAAATTGATTGTGTTGATACCAGTTGTGAAGTCATCTTCGATATTTGTTTGAATTGATCTGAGAATGCTGTC
CA-----TTCTTTTCCCTTGTTTCTTCGTATCTTCTTCTTTCATTATTAAACCAACTGCTGATCTGAATTATGAAAACGA
GTATGACCTCATCGAGCTATTGCTTATCTGAATATAAGTAATTTTGCTTGTGAAATGTTCTATTCTCTACTTGGCTGACC
ATATAGTGATTTGTAATAACATATA--CTCTACATGCAGGGGACTCAACTGTTGGTTTCTGCTATGAAAGGAAGCCGTGC
AAAGCGGGGAATTGTGACAAAGTTGATTGTTTCATGGGCCCCTGACGTATATGATCCTCCTGTTACTTCTGACTCACACA
CAGTGAAGCCGCACCAGAGAAGTTCAAGGAAGAGCCACTACAAATACAAGCCCCCAAAGGGCAGCAGCAGCAGCAGCAGC
AGCCGCACTAGCAGTGGCAGCAAAAAGGACAAGAAGCATTCTCACCACAGCAGCAGCAGCAGCA---AAAGAGATAAGAA
ACCTTCCCATCGCAGTAGCAATGGTGGCAGCAGCAGAATTGACACTAGTGATCCTCAACATCGGAAGGCATATGGCAGCA
TCACTAGCAGCAGAACTGACACTAGTGTTCCTGAATATCATAAGTTATCACCGTGGCAGCCACCGGCTAGTGCCGCAGTG
GAAGAAGCCATACCTACCGTACCTGTACTGAAGGCCATGGAACAGATCAAACGTAGTTCCAGCTGCTGCAAGGAGCCGCC
GATAAGCATGAAGGCCATGGAACAGATCAAGCGTAGCTCCAGCTGCTGCAAGGAGCCGCCGATAAGCATGCTATCACGCC
AATTCGTGGCTGCCAAGTACAAAGGGATGTTTTCTTTCTTGAGTCAGAACCAACTTGCTTCTTGA---------------
--------------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G331900
ATTAGCAGGGCGTGACCTCGGCGCGCCCGCCC----TCCCGCCCGCCGCTCCCTCCTCTCCGCCCGCCGTCGT-CCCCGG
TCGCCGGAACCCGACAAGTTGGATATCTAGGAGGCACCGCAGCGTTGCGGCGCCCACCGCGCGGACACCATGTCTGCGGC
GCCAGCCGCGTACCCCACCACCAGCCTCCGCGCCGTCGCGTCCGGGAACTCC---------TTCTTCCCCTGCTCGCACC
GCCTCAAGCTCTCCTCCTCGCATCGTTTTAGTAGTAGTAGTATTGGTAATCGTAGTAATTGCCTCTGACGTTTGCCTCCC
CCTCGTCGCCCACGACCTTCGGTTCGATCTGCTCCTTGTGCTCGTCCTGAGGATTGTCTGGTTGTGAGGGCTAGGTGCTA
CATCTCTGCCTTTTGCGTTTGCGCGAGTTTGGTGTCTGTGTCTGTGTTCGATCACCAGGTCCGATCCAGAGCGATTTGGC
CTGTTGGAGGTGGTGATTGCTGTCTCTCCGAGGAAAGAGGTATGGGAAA--TTTGCCTGGTCATTTTTTCTAGTATACTC
CTATGTGAAAATATGCCAGTTTACTCTTCTGGTGGAATTGCAAATGCAATGAAATTGTGGTCATAGTATT----------
--------------------------------------------------------------------------------
--------------------------------AACGATGGAATTATGATTCTTTCGAATATTTATTGTCTTATGCAGTTA
TACCTGTTAATATATGTCATGAAGTGAATGCCCTTGAGGATTTAAACATT--------TTAGTTGCTTGATAAAATACTA
CTCGCC----TGAACCATAGTATTAATTGTCGCTGATTTAGTGCAACAAATA----------------------------
-----------------------------------ATATTTGGTTTACCTATTTTACTAGAAATGTTGCCTTAGATCTAA
TGAACTTAAATATGAGCAATATATGTGCACCTATTTCTATCATATGGTCTTGTTAACTTTTATCTAGTAATCTAGGGTGT
GGTCCTTAAGAAATCCTTCACTTGTTCTATTCTAATTTT-GTTTTTCCCTGCTAAGCAGGAAGTTCTCTTCTGAACTTCG
GATCTAGCTTGTGGATGGGCGGACCTTTGGTAGACTGCAGTGCTGAAGGTGTGAGCAGCAGCTCATGTCTCAGCCGCAGC
ACCTGCGGAAAAGCAGGTTTTGAGCACAGCTCTTGTGCTCTCCCTGAAGATGAAAAGTTTGAAGCTGGAATAGCATGTGT
GAAAGATGATTTGGTTGTCAAGGAAATCAGTTTGGCTCTTGCTGAGGTGATGCGTGTCTATGATGACAATGATGATGAAG
AGACAGATCTGAGTGAAGACTCTGACGAAAATGGGGATTCACTTTCTGTAGAATCAGATTCGGCTGATGATTTGGTTGTT
ATTGACACTGAAATGGTCACATCGTCAGCCTTCACTGCCGGGAATGCGTCTGAATCATCAACTGGAAATTCAGAGAATGG
AAATTTCTCAACCAATGTAAGTATTTGATTGCAGTACACGCATGGACTCTTCCTTATCTGTCTTATCTTGCTATATCGTC
AGAGTGTTTGTTTTGTTATCTTTGTACCAAAATATTTGTCAGTAAGCCA-----------GCTCTCCATGTAAAAATGTG
CTAGAAATGTTGGACGCTTAATTTTTCATATATCAACTCTTGTTTCTTATAACAAATTATTACTTGCCAT---TTAGGAT
TTTGGGTAGCTAAATATTATTCCGCTCTTATGCGTCACTGCTCCTTTTTCTACCTGTTAGGAGGTATCATAGCTTGCCTT
TGTTTTGGTAAATTGATTGTGTTGATACCAGTTGTGAAGTCATCTTCGATATTTGTTTGAATTGATCTGAGAATGCTGTC
CA-----TTCTTTTCCCTTGTTTCTTCGTATCTTCTTCTTTCATTATTAAACCAACTGCTGATCTGAATTATGAAAACGA
GTATGACCTCATCGAGCTATTGCTTATCTGAATATAAGTAATTTTGCTTGTGAAATGTTCTATTCTCTACTTGGCTGACC
ATATAGTGATTTGTAATAACATATA--CTCTACATGCAGGGGACTCAACTGTTGGTTTCTGCTATGAAAGGAAGCCGTGC
AAAGCGGGGAATTGTGACAAAGTTGATTGTTTCATGGGCCCCTGACGTATATGATCCTCCTGTTACTTCTGACTCACACA
CAGTGAAGCCGCACCAGAGAAGTTCAAGGAAGAGCCACTACAAATACAAGCCCCCAAAGGGCAGCAGCAGCAGCAGCAGC
AGCCGCACTAGCAGTGGCAGCAAAAAGGACAAGAAGCATTCTCACCACAGCAGCAGCAGCAGCA---AAAGAGATAAGAA
ACCTTCCCATCGCAGTAGCAATGGTGGCAGCAGCAGAATTGACACTAGTGATCCTCAACATCGGAAGGCATATGGCAGCA
TCACTAGCAGCAGAACTGACACTAGTGTTCCTGAATATCATAAGTTATCACCGTGGCAGCCACCGGCTAGTGCCGCAGTG
GAAGAAGCCATACCTACCGTACCTGTACTGAAGGCCATGGAACAGATCAAACGTAGTTCCAGCTGCTGCAAGGAGCCGCC
GATAAGCATGAAGGCCATGGAACAGATCAAGCGTAGCTCCAGCTGCTGCAAGGAGCCGCCGATAAGCATGCTATCACGCC
AATTCGTGGCTGCCAAGTACAAAGGGATGTTTTCTTTCTTGAGTCAGAACCAACTTGCTTCTTGAGCATATCGCAGAGA-
CTCCTGCGCTATTCACAGGCGTTCCTCTGGTTATCAGCAAGGCTTTCATGTTGGATGGCGTT-TGATCTATGAACTTTTG
TTTGGACATCAGTGGACACGGTTTTGAAAATTCTTTGGTTGACGTATGCATGACC-TTGAGATTATTAACTGTCTTTTCT
TATTATTAAAAT-AAAAACTGTTTTGCTCATTTATTTATGTAATATATAAGCATGTTATGTGTGTAATTTGTGTAATAAG
TATGTTATGCGTGTGCATTCTGTTTTCTGTTTTGAGTTTGGGCATTATTACATCAGTTAAGCTGATTCCTTCATGCCCCG
CCAAAAAAAAACTGATTCCTTCATGGATCAGGTAATGGCTGAAGTAAAGTAACACATGGAGGGATGTAACC---------
-AATGGTAACAATGTATCTGTGGATGTAACCACTTCCCCAGTGTAAAATGAAATACACAACATTTCAGTAATCTTAGCTG
CGGTTCTCGTCTGCTC--TTGCTGCGCCAAGCTGCCATCTCTGACTGTCTCCATC-----------------------GA
CACGAAGAGCTCAATCGTGCCGTCAAAGCCAAGTAATAAGGTTACGAACCTACGATCGTTGCTTCCACTTCCGGTCAACC
GCCGGCACGAGAGCTTTGGACCACGACATGTTCCTCCGCCACCTTTGCCTGGCAAACACGACAGACCACGAC---ATGTT
CCTCAGCCACCTTTGCCTGGCAAACACGACATGTTTCA---GTATGCCGACCTGGGGTAGCCTGAACAAGCCCGCTCTTG
CACAGTGTTGGACCTTTGGGACC-CTGTTGCCTGCTGGGGCTGGAAGCACACCATGTGGA-------GGGTGTGGGACTG
AGCATCACGGTGCCCCTGAAGTGGCCATATTGGCATAAAGAAACAAGTAAACATTAATCAATCTTTTAGGTGCATGTGCA
TCCAATTATAGTTCCAAATTTGACTTATAAATG--GTAATGAGTAACGCAACCGGCCTTTATTAACGCAATGGACAGAGA
>chr3A_1
ATTAGCAGGGCGTGACCTCGGCGCGCCCGCCCTCCCTCCCGCCCGCCGCTCCCTCCTCTCCGCCCGCCGTCGT-CCC-GG
TCGCCGGAACCCGACAAGTTGGATATCTAGGAGGCACCGCAGCGTTGCGGCGCCCACCGCGCGGACACCATGTCTGCGGC
GCCAGCCGCGTACCCCACCACCAGCCTCCGCGCCGTCGCGTCCGGGAACTCC---------TTCTTCCCCTGCTCGCACC
GCCTCAAGCTTTCCTCCTCGCATCGTTTTAGTAGTAGTAGTATTGGCAATCGTAGTAATTGCCTCTGACGTTTGCCTCCC
CCTCGTCGCCCACGACCTTCGGTTCGATCCGCTCCTTGTGCTCGTCCTGAGGATTGTCCGGTTGTGAGGGCTAGGTGCTA
CATCTCTGCCTTCTGCGTTTGCGCGGGTTTGGTGTCTGTGTTCGATTTCGATCAGCAGGTCCGATCGAAAGAGATTTGGT
CTGTTGGAGGTGGTGATTGCTGTCTCTCCAAGGAAAGAGGTATGGGAAA--TTTGCCTGGTCATTTTTTCTAGTA-----
-TATGTGAAAATATGCCAGTTTACTCTTCTGGTGGAATTGCAAATGCAATGAAATTGTGTCCA---TATC----------
--------------------------------------------------------------------------------
--------------------------------AATGATGGAATTACGATTCTTTCGAATATTTATTGTCTTATGCAGTTA
TACTCGTTAAT-TATATCATGGAGTGAATGC------------------T--------TTAGTTGCTTAATAAAATACTA
CTCGCT----TGATCCATATTAATTT---TCGCTGCTTTAGTACAACAATTA----------------------------
-----------------------------------ATATTTGGTTTACCTACTTTGCCAGAAATGTTGACTTAGATCGAA
TGAACTTAAATATGAGCAATATATGTGCACCTATTTCTATCGTATGGGCTTCTTAACTTC-ATCTAGTAATCTAGGGTGT
GGTCCTTAAGAAGTCCTTTACTTGTTCTATTCTAATTTTTGTTTTTCCCTGCTAAGCAGGAAGTTGTCTTCTGAACTTCG
GATTTAGCTTGTGGATGGGCGGACCTTTGGTAGACTGCAGTGCCGAAGGTGTGAGCAGCAGCTCATGTCTCAGCCGCAGC
ACCTGCGAAAAAGCAGGTTTTGAGCACAGCTCTTGTGCTCTACCTGAAGATGAAAAGTCTGAAGCTGGAATAGCATCTGT
GAAAGATGATTTGGTTGTCAAGGAAATCAGTTTGGCTCTTGCTGAGGTGATGCGTGTCTATAATGACAATGATGATGAAG
AGACAGATCTGAGTGAAGACTCTGACGAAAATGGGGATTCACTTTCTGTAGAATCAGATTCGGCTGATGATTTGGTTGAT
ATTGACACTGAGGTGGTCACATCGTCAGCCTTAACTGCCGGGAATGCGTCTAAATCATCAACTGGAAATTCAGAGATTGG
AAATTCCTCAACCAATGTAAGTATTTGATTGCAGTACACGCATGGACTCTTCCTAATCTGTCTTATCTTGCTAGCCAAAG
CGTTTCT---TCTTGTCATCTTTTTGCCAAAAAGATTGGCAATAGGCCAATAGCTATGCGGCTCCTCATATAAAAATGTG
CTTTAAGTGTTGGACGCTTAGTTTTTAACATATTGACTCTTGCTTCTTAGAACATATTATTACCTG---T---TTAGAAT
TTCGGGTAGCTAAATGTAATTCTGCTCTTATGATTGGCTGCTCCTTTTTCTACCTGTTACGAGGTATCATAGCTTGTCAT
TGTATGGGTAAATTGATTGTGTTGATACGATCTT----GTCATCTTCGATATTTGTTTGAATTGACCCAAGAATGATGTT
GTTATTTTTTTCTACTCTTATTTCTTAATATATTTTTCATTCATTATTGTCCG-ACTGTTGCTCTGAATTCTGAAAATGA
GTATGACCACATAGTGTTATTGCTTG----------------------TGTTAAATGTTCTGTCCTCTACTTGGATG---
-----GTGATTTGTAAC-----ATA--CTGTATATGCAGGGGACTGAACTGTTGGTTTCTGCAATGAAAGGAAGCCGTGC
AAAGCGGGGAATTGTGACAAAGTTGAGTGTTTCATGGGCCCCTGACGTATATGATCCTCCTGTTACTTCTGACTCACACA
CAGTGAAGCCGCACCAGAGAAGTTCAAGGAAGAGCCACTACAAATACAAGCCCCCAAAGG------GCAGCAGCAGCAGC
AGCCGCACTAGCAGTGGCAGCAAAAAGGACAAGAAGCATTCTCACCACAGCAGCAGCAGCAGCAGTAAAAGAGATAAGAA
ACCTTCCCACCGCAGTAGCAATGGTGGCAGCAGCAGAACTGACACTAGTGATCCTCACCATCGGAAGGCATATGGCAGCA
GCATTACCAGCAGAACTGATACTAGTGTTCCTGAATATCATAAGTTATCGCCGTGGCAGCCACCGGCTAGTGCCGCAGTG
GAAGAAGCCATGCCCCCTGTACCTGTTCTGAAGGCCATGGAACAGATCAAGCGTAGCTCCAGCTGCTGCAAGGAGCCGCC
GATAAGCATGAAGGCCATGGAACAGATCAAGCGTAGCTCCAGCTGCTGCAAGGAGCCACCGATAAGCATGCTATCACGCC
AATTCGTGGCTGCCAAGTACAAAGGGATGTTTTCTTTCTTGAGTCAGAACCAACTTGCTTCTTGAGCATATGGCGGGGGC
CTCCTGCGCTATTCACAGGCGCGCTTCTGGTTATCAGCAAAGCTTTCATGTTGGATGGTGTTTTGATCTGTGAACTTTTG
TTTGGACATCAGTGGACATGGTTTTGAAAATTCTTTGGTTGACGTATGCACGACC-TTGAGATTTTAACCTGTCTTTCCT
TATTATTAAAAT-AAAAACTGTTTTGCTCATTTATTTATGTAATATATAAGCATGTTATGTGTGTAATTTCTGTAATAAG
CATGCTATGCGTGTGCATTCTGTTTTCTGTTTTGAGTTTGGGCATTATTACATCAGTTAAGCTGATTCCTTCATGCCCTG
CAAAAAAAGAGCCGATTCCTTCATGGATCAGATAATGACTGAAGTGAAGTAACACATGGAGGGATGTAT------GTAAC
CCATGGTAACAATGTATCTGTGGATGTAACCACTTCCCCAGTGTAAAATGAAATACACAACATTTCAGTAATCTTAGCTT
CGGTTCTCGTCTGCTC--TTGCTGCGCCAAGCTGTCATCTCTGACCGTCTCCATCCACATGAGAAGCTCAATCGTGCCGA
CATGAAAAGCTCAATCGTGCCGTCAAAGGCAAGTAATAAGGTTACGAACTTTTGATCGTTGCTTCCAGTTCCGGTCAACC
GACGGCATGAGAGCTTTGGACCACGACATGTTCCTCCGCCACCTTTGCCTGGCAAA----------CACGAC---ATGTT
CCTCGGTCACCTTTGCCTGGCAAACACGACATGTTCCA---GTATGCCGACCTTGGGTAGCCCGAACAAGCCCGCTCTTG
CACAGTGTTGGACCTTTGGGACCCCTGTTGCCTGCTGGGGCTGGGAGCACACCATGTGGA-------GGGTGTAGGACTG
AGCATCATGGTGCCCCTGAAGTGGCCATATTGACATAAAGAAACAAGTAAACATTAATCAAACATTTAGGTGCATGTGCA
TCCAATGATAGTTCCAGATTTGACTTATAAATGGTGTAATGAGTAACGCAACCGGCCTTTATTAACGCAATGGACAGAGA
>chr3B_4
---AGCAGGGCGTGACA-----GCGCCCTCTCGTCGTATCTCCCGCCGC-CCCTCCTCTCCGCCCGCCGTCGTCCCC-GG
TCGCCGGAACCCGACAAGTTGGATATCTAGGCGGCACCGCAGCGTTGCGGCGCCCACCGCGCGGACAGGATGTCTGCGGC
GCCAGCCGCGTACC---CCACCAGCCTCCGCGCCGTCGCGTCCGGGAACTCCGAGGCCTCCTTCTTCCCCTGCTCGCACC
GCCTCAAGCTCTCCTCCTCGCATCGTTTTAGTAGTAGTAGTATTGGTAATCGTAGTAATTGCCTCTGACGTTTGCCTCCC
CCTCGTTGCCCACGACCTTCGGTTCGATCTGCTCCTTGTGCTCGTCCTGAGGATTGTCTGGTTGTGAGGGCTCTGTGTTA
CATCTCTGCCTTTTGTGTTCGCGCGGGTTTGGTGTCTGTGTCTGTGTTCGATCACCAGGTCCGATCCAGAGCGATTTGGC
CTGTTGGAGGTTGTGATTGCTGTCTCTCCGAGGAAAGAGGTATGGGAAAGTTTTGCCAGGTCATTTTTTCTATG------
---TGTGAAAATATGCCAGTTTACCCTTCTGGTGGAATTGCAAATGCAATGAAATTGTGTACTCCCTCCGTCCGGAAATA
CTTGTCATCAAAATGAATAAAAGGGGATGTATCTAGATGTATTTTAGTTCTAGATACACTCCTTTTTGTCCATTTTGATG
ACAAGTTTTTCCGGACGGAGGGAGTACATATTAATGGTGGAATTACGTTCCTTTCGAATATTTGTTGTCTTATGCAGTTA
GACTCTTTAAT-TATATCATGGAGTGAATGCCCTT-AGGCTTTAAACATGTTTTGTGATTAGTTTCTTTATAAAATACTG
CTACTCCCTCTGATCCATATTAGTTG---TCACTCAAATGGATGTATCTAGCACTAAAATACATCTAGATACATCCGTTT
CAGCTACAACTAATATGGATCGGAGGGAGTAGTAGATTTTTGGTTTACCTGTTTTGCTAGAAATGTTGCCTCAGATCGAA
TGAACTTAAATATGAGCAATATATGTGCACCTATTTCTATCATATGGTCTTATTAACTTT-ATCTAGTAAACTAGGGCGT
GGTCCTTAAGAAGTCCTT-ACTTGTTCTATTCTAATTTTTGTTTTTCCCTGCTAAGCAGGAAGTTCTCTTCTGAACTTCG
GATTTAGCTTGTGGATGGGCGGACCTTTGGTAGACTGCAGTGCTGAAGGTGTGAGCAGCAGCTCATGTCTCAGCCGCAGC
ACCTGTGGAAAAGCAGGTTTTGAGCACAGCTCTTGTGCTCTCCCTGAAGATGAAAAGTTTGAAGCTGGAATAGCATGTGT
GAAAGATGATTTGGTTGTCAAGGAAATCAGTTTGGCTCTTGCTGAGGTGATGCGTGTCTATAATGACAATGATGATGAAG
AGACAGATCTGAGTGAAGACTCTGACGAAAATGGGGATTCACTTTCTATAGAATCAGATTCGGCTGATGATTTGGTTGAT
ATTGACACTGAAGTGGTCACATCGTCAGCCTTCACTGCTGGGAATGCGTCTGAATCATCAACTGGAAATTCAGAGAATGG
AAATTCCTCAACCACTGTGAGTATTTGATTGCAGTACACGCATGGACTCTTCCTAATCTGTCTTATCTTGC---------
-----------------------------------------------CAATCGCTATGCGGCTCTTCATATAAAAATGTG
CTATAAGTGTTGGATGCTTAGTTTTTGACATATTGACTCTTGCTTCTTAGAACATATTATTACCTG---TCATTTAGAAT
TTTGGGTAGCTAAATGTAATTCTGCTCTTATGATTTGCTGCTCCTTCTTATACCTGTTAGGAGGTATCATATCTTGTCAT
TGTACGGGTAAATTGATTGTGCTGATACGATCTC----GTCATCTTTGATAATTGTTTGAATTGACCCGAGAATGATGTT
A----TTTTTTCTACTCTTATTTCTTAATATTTTTTTCATTTATTATTGTCTG-ACTGTTGCTCTGAATTCTGAAAATGA
GTATGACCTC--AGTGTTATTGCTTG----------------------TGCTAAATGTTCTGTTCTCTACTTGGATG---
-----GTGATGTGTTAA-----ATGTTCTGTATATGCAGGGGACTCAACTGTTGGTTTCCGCAATGAAAGGAAGCCGTGC
AAAGCGGGGAATTGTGACAAAGTTGAGTGTTTCATGGGCCCCTGACGTATATGATCCTCCTGTTACTTCTGACTCACACA
CAGTGGAGCCACACCAGAGAAGTTCAAGGAAGAGCCACTACAAATACAAGCCCCCAAAGGGCG---GCAGCGGCAGCAGC
AGCCGCAGCAGCAGTGGCAGCAAAAAGGAAAAGAAGCATTCTCACCACAGCAGCAGCAGCAGCAGCAAGAGAGATAAGAA
ACCTTCCTACCGCAGTAGCAATGGCGGCAGCAGCAGAACCGACACTAGTGATCCTCAACATCGGAAGGCATATGGCAGCA
GCATTACCAGCAGAACTGACACTAGTGTTCCTGAATATCACAAGTTATCGCCGTGGCAGCCACTGGCTAGTGCCGCCGTG
GAAGAAGCCATGCCCCCCGTACCTGTACTGAAGGCCATGGAACAGATCAAACGCAGTTCCAGCTGCTGCAAGGAGCCGCC
GATAAGCATGAAGGCCATGGAACAGATCAAGCGTAGCTCCAGCTGCTGCAAGGAGCCGCCGATAAGCATGCTATCACGCC
AATTCGTGGCTGCCAAGTACAAAGGGATGTTTTCCTTCTTGAGTCAGAACCAACTTGCTTCTTGAGCATATCGCGGAGA-
CTCCTGCGCTATTCACTGCCGTGCTTTTGGTTATCAGCAAGGCTTTCATGTTGGATGGTG-TTTGATCTATGAACTTTTG
TTTGGACATCAGTGGGCATGGTTTTGAAAATTCTTTGGTTGACGTATGCACGATCGTTGAGATTATTAACTGTCTTTCCT
TATTATTAAAATAAAAAACTGTTTTGCTCATTTATTTATGTAATATATAAGCATGTTATGTGTGTAATTTGAGTAATAAG
CATGTTATGCGTGTGCATTCTGTTTTATGTTTTGAGTTTGGGTATTATTACATCAGTTAAGCTGATTCCCTCATGCCCCG
CCAAAAAAAAACTGATTCCTTCATGGATCAGACAATGACTTTAGTAAAGTAACACATGGAGGGATGTAACAAATGGTAAC
AAATGGTAACAATGTATCTGTGGATGTAACCACTTCCCCAGTGTAAAATGAAATACACAACATTTCAGTATTCTTAGCTT
CGGTTCTCGTCTGCTCTTTTGCTGCGCCAAGCTGCCATCTCTGACTGTCTCCATG-----------------------GA
CACGAAAAGCTCAATCGTGCCGTCAAAGCCAAGCAATATGGTTATGAACTTACGATCGTTGCTTCCAGTTCCGGTCAACA
GCCGGCACGAGAGCTTTGGATCACGACATGTTCCTCCACCACCTTTGACTGGCAAACACGACAGACCACGACGACATGCT
CCTCAGCCACCTTTGCCTGGCAAACACGACATGTTCCACCGGTATGCCGACCTTGGGTAGCCTGAACAAGCCCGCTCTTG
CACAGTGTTGGACCTTTGGGACC-CTGTTGCCTGCTGGGGCTGGGAGCACACCATGTGGATTGTGGAGGGTGTAGGACTG
AGCATCACGGTGCCCCTGAAGTGGCCATATTGGCATAAAGAAACAAGTAAACATTAATCAATCTTTTAGGTGCATGTGCA
TCCAATGATAGTTCCAACTTTGACTTATAAATGGTGTAATGAGTAACGCAACCGGCCTTTATTAACGCAATGGACAGAGA
>SNPs
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
---------------------------------------------------------------------------SSSSS
S----------------------------------------------------------SS--SSS---S----------
--------------------------------------------------------------------------------
----------------------------------S----------S----------------------------------
---SS------S---S-----S-------------S---S----------------------------S-----------
-------------S-----S--S-SSSSS-------------S-------------------------------------
-------------------------------------------------------S---------------------S--
---------------------------------------------------S--------S-------------------
------------S-----S-------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
------------------------------------------------------------------------------S-
------------S-------------------------------------------------------------------
-----S------------------------------------------------S------------------SSSSSSS
S-SS-S-SSS-S----S------S-S------SSS---S--S--S--------------------S---S----------
---S--S-------------S-----S-S----SS-------S------S----S--------S--SSS--------S--
---------------S-S----S---------SS-SS---------------------------------------S-S-
---S-S----------------------S-SS-SSSSS---------------------------S-S-------S---S
SS-------S-S-S-S---S------SS---S--S---S---------SSS-SS----S--S--------S------S--
------------S-S-S--------SSSSSSSSSSSSSSSSSSSSSSS---S---------S------------S--SSS
SSSSS-----------SSSSSS-------S--S-----------------------------S-----------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------SSSS--------------
--------------------------------------------------------------------------------
---------S----------------------------S-----------------------------------------
S--S--S------------------------------------------S------------------------------
-----------S--SS----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
----------------------S-S---------------------------------S---------------------
------------------S-------------------------------S--------------------------S--
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-------------------------------S-----S--------------------------------S---------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------S------------------------------------------S-----------------S------------
--------------------------------------------------------------------------------
-----------------------------------S-----------------S--------------------------
--------------------------------------------S----------------------------S------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
>forward_840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TGAAGTGAATGCCCTTGAGGA----------------------------------------
--------------------------------------------------------------------------------
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>reverse_2193
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------CATGCAGGGGACTCAACTGT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_1655
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ACACGCATGGACTCTTCCTT-------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>reverse_2656
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------ACCGTACCTGTACTGAAGGC---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>forward_2652
--------------------------------------------------------------------------------
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------------------------------------------------------------------------CCGCAGTG
GAAGAAGCCATA--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>reverse_3725
--------------------------------------------------------------------------------
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--------------------------------------------AAGCACACCATGTGGAGGG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
