>input_sequence_46711
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------ATGGACGCGCCCGCA
CCTGCCAAGAGGAGACGAGGCGGCGGTGGCGGAGGCGGGGAGAAGAAGGATCTGTTCCACGTCGTCCACAAGGTGCCCGC
CGGCGACAGCCCCTACGTCCGGGCCAAGCACCTCCAGGTTGGTTAATCATTCGCAGCTCCCTTCCTGCCCATGCAAATTC
TGCCTC-----------------TCTAGAGTGGATTTATTGTGG-------TCAAAACGGAAACTGGAATA---TATACT
GTATGCAGTAGCCTTTGATTGTGCACCGGTTGCCCAATCATGATAGCGGCCACCATGAAAGCAGATCACAGTACTATTCC
CTACTTTTCCGTCGGCTCCGGGCGATTCTTGCCTTCTTGCTCTCGCCGCCAAATCTTCTTTGCTCCTCTTGGCCGAAAGA
AATCGTTGTTCGCCGAATCGGTCACAGTGCTGAGG----TTCTCCGTGTTGCCGCAAATGGGCAGTGGTCCATCGCGCG-
--------TGCGTGCTTAGTGAATGATTATGTTCTAATCACATCAAATTAAATTCAGTTACACCATACATAATTCATGAT
TAG---TAGTTGAACGAGAG-AAAAATCCCTTTCCTCAAAAAAAAAAAAGAATCTGTTTTCCCTGCAAACGTTAAGTTGC
TGACTTGGGTGAAACGGCTTGTATTGATCAGCTCGTGGAGAAGGACGCGGAGGCGTCGATCGTGTGGTTCTGGAAGGCGA
TCAACTCCGGGGACAGGGTAGACAGCGCGCTCAAGGACATGGCCGTGGTGATGAAGCAGCAGGACCGCGCCGAGGAGGCG
ATAGAGGCCATCAGATCCTTCAGGCACCTCTGCTCCAGGCAGGCCCAGGAGTCCCTCGACAACCTGCTCATCGACCTCTA
CAAGGTGCGTCTCAGCTGCACATCTCACAGGG-AAATCTGCTCAAGGATTGGTTTA----TGCATTAATTCTAACCTGGT
ATGTGG-ATTTTGATATTCAGAAATGCGGAAAAGTTGACGAGCAGATAGAGCTGCTGAAACAGAAGCTCAAGATGATATG
CCTCGGCGAGGCCTTCAACGGGAAGATCACCAAGACGGCGCGATCCCATGGCAAGAAGTTCCAGGTCTCGATCCAGCAGG
AGATGTCGCGCATTCTGGTATGGGTTACTGCTCCCATGTTACTCTTACTGATTGCTAATTAGGCATGTCTTGGTCTATCA
CTGCAGCAGTATTCATTTATACTCAGGTTACTGAAACTTTTGATGTGCGATTTCACAGGGTAACCTTGGCTGGGCTTACA
TGCAGCAGAAC------AACTACGAAGCCGCTGAATTGGTGTACCGGAAGGCCCAGACTATCGTACCTGATGCCAACAGA
GCGTGCAACCTCGGGCTGTGCTTGATCAAGCAGGGCAGGCATGAGGAGGCAGTGCAAGTGCTCGGGGATGTCCTACTTCG
CAGAATCTCTGGGTTGGATGATGACAAGGCGGTTGCCCGAGCTGAGCAGCTTCTCAGTGAGCTCGGTCCGACGACACATG
TTTCATCGCCCTTTGATATTGGCTTGAGTTTCACCGAAGAGATCATGGAGAGACTAGACCTTGTGATGAATGATTGGACA
CCGTTCAGGTCGAGGCGGCTGCCCGTATTCGAGGAGTTAGATGCATTCAGGGACCAAATGGCTTGTTGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>chr1B_1_TraesCS1B01G337400
GGAGTATTATCATACACTAGTATATGATACTCCCCACTATGGGCAGCCTTAGAGTAACATAGATAGATACCATAATATAA
TAAATGATGTAGTACTACTTTGTGTCATGCATGGTCACAAATAATTAAGATCATCTACCATATGATACTATACACTATGA
AGGTAGTATCATATGCATGATAGTGTCAAAAAACTTGTCCCTTAAATGGATGTACCTAGCATAAACTTGGTGCTAGATAT
ATTCATTTGAGGGACAAGTTTTTTGGACGGAGAGAGTATATGGTACTCCCCACTATGAGTAGCCTAAGAGCATGTCCAAC
AGGCGCCCAAAATTTTCATGCCCTAAAATAGTTTTAACGCGCAACTGTAGCAGTTTAAGCGCGCCGGACCCAACATTGTT
TTATCATATGCCCAAAAACACACAGTGTAAATTGTGAAACGTGTGCAATCCACCGCCTCAAATTTACAGCATCCCGTAGC
GTTTTTCAGCGCGTGTCCAATTTTTTTTCACACGTACTGTTTTACAGCTTCTGTTGAAGCTGTACTGTCCGGCATCAAAA
ACCTGAATTTTAATGCGCGGAGCAGTTCTCTAAACACATCGCACATGCGTCTAGAAGATGCAGCCAATCCGGACGCAGTT
GAGCTCGCTAAACGCCCATCAAACAGTAACAATAAAG-----------GCTTCGAGCCGCCCGTCACACCCGCTGCTCTC
CCTAGGCGCCGCGAGCACGTCACTACGGATGCGGACGCGTGGTGCCCACCCGACCGCCGGATGGGGGCCAGGTCGCCATC
CAGCCCCCGCCCTCGAACCCGGACGCCTTCCCGTCCAGATCCACTCCGCCCGCCTCGTCATCCCCC--------CTCCTC
CCTCCCTTCCCACCCTCCAGATCCCGCAACCCGCGAAACAAACCACCAGCCAAG-----CCGGCAAGCAATCCGCGCGCC
CCCATTGTTCTC-CTCTCCCTCTCTCTCTCCCTCTCAGCATCCGCTCCGAATCAGCTCCGACGGCATGGACGCGCCCGCA
CCTGCCAAGAGGAGACGAGGCGGCGGTGGCGGAGGCGGGGAGAAGAAGGATCTGTTCCACGTCGTCCACAAGGTGCCCGC
CGGCGACAGCCCCTACGTCCGGGCCAAGCACCTCCAGGTTGGTTAATCATTCGCAGCTCCCTTCCTGCCCATGCAAATTC
TGCCTC-----------------TCTAGAGTGGATTTATTGTGG-------TCAAAACGGAAACTGGAATA---TATACT
GTATGCAGTAGCCTTTGATTGTGCACCGGTTGCCCAATCATGATAGCGGCCACCATGAAAGCAGATCACAGTACTATTCC
CTACTTTTCCGTCGGCTCCGGGCGATTCTTGCCTTCTTGCTCTCGCCGCCAAATCTTCTTTGCTCCTCTTGGCCGAAAGA
AATCGTTGTTCGCCGAATCGGTCACAGTGCTGAGG----TTCTCCGTGTTGCCGCAAATGGGCAGTGGTCCATCGCGCG-
--------TGCGTGCTTAGTGAATGATTATGTTCTAATCACATCAAATTAAATTCAGTTACACCATACATAATTCATGAT
TAG---TAGTTGAACGAGAG-AAAAATCCCTTTCCTCAAAAAAAAAAAAGAATCTGTTTTCCCTGCAAACGTTAAGTTGC
TGACTTGGGTGAAACGGCTTGTATTGATCAGCTCGTGGAGAAGGACGCGGAGGCGTCGATCGTGTGGTTCTGGAAGGCGA
TCAACTCCGGGGACAGGGTAGACAGCGCGCTCAAGGACATGGCCGTGGTGATGAAGCAGCAGGACCGCGCCGAGGAGGCG
ATAGAGGCCATCAGATCCTTCAGGCACCTCTGCTCCAGGCAGGCCCAGGAGTCCCTCGACAACCTGCTCATCGACCTCTA
CAAGGTGCGTCTCAGCTGCACATCTCACAGGG-AAATCTGCTCAAGGATTGGTTTA----TGCATTAATTCTAACCTGGT
ATGTGG-ATTTTGATATTCAGAAATGCGGAAAAGTTGACGAGCAGATAGAGCTGCTGAAACAGAAGCTCAAGATGATATG
CCTCGGCGAGGCCTTCAACGGGAAGATCACCAAGACGGCGCGATCCCATGGCAAGAAGTTCCAGGTCTCGATCCAGCAGG
AGATGTCGCGCATTCTGGTATGGGTTACTGCTCCCATGTTACTCTTACTGATTGCTAATTAGGCATGTCTTGGTCTATCA
CTGCAGCAGTATTCATTTATACTCAGGTTACTGAAACTTTTGATGTGCGATTTCACAGGGTAACCTTGGCTGGGCTTACA
TGCAGCAGAAC------AACTACGAAGCCGCTGAATTGGTGTACCGGAAGGCCCAGACTATCGTACCTGATGCCAACAGA
GCGTGCAACCTCGGGCTGTGCTTGATCAAGCAGGGCAGGCATGAGGAGGCAGTGCAAGTGCTCGGGGATGTCCTACTTCG
CAGAATCTCTGGGTTGGATGATGACAAGGCGGTTGCCCGAGCTGAGCAGCTTCTCAGTGAGCTCGGTCCGACGACACATG
TTTCATCGCCCTTTGATATTGGCTTGAGTTTCACCGAAGAGATCATGGAGAGACTAGACCTTGTGATGAATGATTGGACA
CCGTTCAGGTCGAGGCGGCTGCCCGTATTCGAGGAGTTAGATGCATTCAGGGACCAAATGGCTTGTTGATTTGTTACTTC
GTCGG-TTTTTAAACTTTTAACGTGCATTTGCATGTGGTAAATAGAAGTTGATGTGCATGTATGTAGGAGGTT-------
-----TTGTGGATGTTATAGGTGTGAATGAGAGATTTGATAGATTGTAGATATCATAAGCAGCTAGGGTTGATGCAAAGC
GTTCCCTTGCGGAGTAATGTGGTTTCAGTTTTGGATGCAGTTGGCCTTTGCCCAGAGATATGCTTAATTTGACCTCCTTG
GGATGTGAAATTGTCATGTGGATTGCTCACTTGCTTTAATTGCAGAAACTGAAATGATTCCTTTTCCTTTTGCTAAAAG-
-CCCAACACTGAGTACAACATATT----ACCAAGTAAAATTTCATCCATGCAGGAGCCAGCTTGAGCGAGCACCGCCAAA
TTCAAGAACTTGAGAACAAGTAAAAGAGACAATTGGTGCTGAATACAGATAAGAGAGCACTATATACACTCACAAAATAG
ACATGTGGTGCTGGATTACTGATAAGAGGTCAGTATACACACACAAAAAAAGAACACACACACAAACACCGCAAGAAGAC
ATCCCAATATTTGTTGAATTGTTGAATCCAAGAGTTTGGTTAGTTATTGTATACATCCTTTAAGTGACAATCTCACTATG
TGTACAAAGCACCTAAGAACACCAAATAAAAGATGTGAATTCTGCAATGCTCTTTGACCTACAGTATGGATTTCAATGCA
GTGGACTTGGCAACCTAGCTCTTTCTGAAACCAAGGGTCTGCAACTTCAATTCCCAACCCTTCCTATTCCCAGCCGACTT
CCCGCGATCCTGAAAT-----------------ATATGTTACATTTAGTTTCATGCTCATGGCTCGCCCTCTTTGTCCAT
CATTGTTCTTGTGCGGTTTAATGTGGTGTGCAAGCCATGCTCGATGGTTTGGTTGTTGCTTCAGGCTCATGGCTCACCCT
CTTTCTTCCCCATTTTT-CTTGTGCGGTTTAATGAGGTGTGGTAGTCGTGCACGATGTTTTGGTTA
>chr1A_596
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ACATCGCACATGCGTCTAGAAGATGCGGCCAATCGGGACGGAGTT
GAGCTCGTTAAACGCCCATCAAAC-----------AG-----------GCTTCGAGCCGCCCGTCACACCCGGTGCTCGC
CCGAGGCGCCGCGAGCACGTCACTGCGGAAGCGGACGCGTGGTGCCCACCCGACCGCCGGATGGGGGCCAGGTCGCCATC
CAGCCCCCGCCCTCGAACCCGGACGCCTTCCCGTCCAGATCCACTCCGCCCGCCTCGTCATCCCCCGCGGCCCCCTCTTC
CCTCCCTTCCCACCCTCCAGATCCCGCAACCCGCGAAACAAACCACC-----AG-----CCGGCAAGCAATCCGCGCGCG
CCCATTGTTCTC-CTCTCCCTCTCCCTCTCCCCCCCAGCCTCGGTTCCGGATCAGCTTCGACGGCATGGCCGCACCTCCA
CCCTCCAAGAGGAGAGGCGGCGGCGGTGGCGGGGGTGTGGAGAGGAAGGATCTGTTCCACGTCGTCCACAAGGTGCCCGC
CGGCGACAGCCCCTACGTCCGGGCCAAGCACCTCCAGGTTGGTTAATCATTCGCAGCTCCCTTCCTGCCCATGCAAATTC
TGCCTC-----------------TCTCTAGTGGATTTATTGTGG-------TTAAAACGGAAACTGGAATATACTATACT
GTATGCAGTAGCC-TTGATTGTGCACCGGTTGCCCAATCATGATAACGGCCAGCATGAAAGCAGATCACAGTATTATTCC
CTACTTTTCCGTCGGCTCCGGGCGATTCTTGACTTCTTGCTCTCGCCGTCAAATCTTCTTTGCTCCTCTTGGCCGAAAGA
AACCATTGCTCGCCGAATCGGTCACTGTGCTAAGGTTACTTCTCCGTGTTGCCACAAATGGGCAGTGGTCCATCGCGCGG
AGTCGACCTGCGTGCTTACTGAATGATTATGTTCTAATCACATCGAATTAAGTTCAGTTACACCATA----ATTCATGAT
TAGGAGTAGTTGAACGAGAGAAAAAATCCCTTTCCTCAAAAAAAGAGAGAATA--TTTTTCCCTGCAAACGTTAAGTTGC
TGACTTGGGTGAAACGGCTTGGATTGATCAGCTCGTGGAGAAGGACGCGGAGGCGTCGATCGTGTGGTTCTGGAAGGCGA
TCAACTCCGGGGACAGGGTGGACAGCGCGCTCAAGGACATGGCCGTGGTGATGAAGCAGCAGGACCGCGCCGAGGAGGCC
ATAGAGGCCATCAGATCCTTCAGGCACCTCTGCTCCAGGCAGGCCCAGGAGTCCCTCGACAACCTGCTCATCGACCTCTA
CAAGGTGCGTCTAACTTGCACGTCTCACAGGAAAAATCTGCTCAAGGATCGATCCGGCCGTGCATCTATTCTAACCTGAT
ATGTCTCATTTTGATCTTCAGAAATGCGGAAAAGTCGACGAGCAGATAGAGCTGCTGAAACAGAAGCTCAAGATGATATG
CCTCGGCGAGGCCTTCAACGGGAAGATCACCAAGACGGCCCGCTCCCACGGCAAGAAGTTCCAGGTCTCGATCCAGCAGG
AGATGTCACGCATTCTGGTACGGGTTACTGCTCCCATGTTACTCTTACTGATTGCTAATTAGGCATGTCTTGGTCTGTCA
CTGCAGCAATATTCAGTTATACTCAGGTTACTGAAACTTTTGATGTGCAATTTCACAGGGTAACCTTGGCTGGGCTTACA
TGCAGCAGAAC------AACTATGAAGCCGCAGAATTGGTGTATCGGAAGGCCCAGACTATCGTACCTGATGCCAACAGG
GCGTGCAACCTCGGGCTGTGCTTGATCAAGCAGGGCAGGCATCAGGAGGCAGTGCAAGTACTCGAGGATG----------
--------------TGGATGACGACAAGGCGGTTGCCCGAGCTGAGCAGCTCCTCAGTGAGCTCGGTCCGACTACACATG
TTTCATCGCCCTTTGATATTGGCTTGAGTTTCACTGAAGAGATCATGGAGAGACTAGACCTTGTGATGAATGAGTGGACA
CCGTTCAGGTCGAGGCGGCTGCCTGTATTCGAGGAGTTAGATGCATTCAGGGACCAGATGGCTTGTTGATTCGTTACTTC
GCCAG-TTTTTAATCTTTTAACGTGCATTTGCGTGTGGTAAATAGAAGTTGATGTGCATGTATGTAGGAGGTTATGTAGG
AGGTTTTGTGGATGTTACAGGTGTGAATGAGAGATTTGATAGATTGTAGATATCATAAGCAGCTAGGGTTGATGCAAAGC
GTTCCCTTGCGGAATAATGTGGTTTCAGTTTTGAATGCAGCTGGTCTTTGCCCAGAGATATGCTTAATTTGACCTCCTTG
CGATGTGAAATCGTCGTGTGGATTACTCACTTGCTTTAATTGCAAAAACTGAAATGATTCCTTTTCCTTTTGCTAAAAG-
-CC-AACACTGAGTATAACATATTGCATACCAAGTAAAATTTCATCCATGCAGGAGCCAGCTTGAGCGAACACCGCCAAA
GTCAAGAACTTGAGAGCAAGTAAAAGAGACAGCTGGTGCTGAATACAGATAAGAGAGCACTATATACACTCACAAAATAG
ACATGTG---CTGGATTACTGATAAGAG----------------------------------------------------
ATCCCAATATTTGTTGGATTGTTGAATCCAAGAGTTTGGTTCGTTATTGTATACATCCTTTAAGTGATAATCTCACTATG
TGTACAAAGCACCTAAGAACACCAAATAAAAGATGTGAATTCTGCAATGCTCTTTGACCTACAGTATGGATTTCAACGCC
AGGGACTTGCCAGGCTAGCTCTTTTTGAAACCAAGCGCCTGCAACTTCAATTCCCAACCCTTCCTATTCCCGGCCGACTT
CTCTTGATACTGAAATACTCCTCTTTCCCCCTCATATGTTACATCCAGTTTCATGCTCATGGCTCGCCCTCTTTCTCCCT
CATTGTTCTTGTGTGGTTTAATGTGGTGTGCAAGCCATGCTCGCTGTTTTGGTTGTTGCTTCATGCTCATGGCTCATCCT
CTTTCTTCCCCATTTTTTCTTGTGTGGCTTAATGAGGTGTGGTAGTCGTGCTCGATGTGTTGGTTA
>chr1D_607
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GCGTCTAGAAGGTGCAGCCAATCGGGACGCAGTT
GAGCTCGTTAAACGCCCAACAAAC-----------AGTAACAATAAAGGCTTCGAGTCGCCCGTCACACCCGCTGCTCGC
CCAAGGCGCCGCGAGCACGTCACTACGGATGCGGACGCGTGGTGCCCACCCTACCGCCGGATGGGGGCCAGGTCGCCATC
CAGCCCCCGCCCTCGAACCCAGACGCCTTCCCGTCCAGATCCACTCCGCCCGCCTCGTCATCCCCC--------CTCCTC
CCTCCCTT-CCACCCTCCAGATCCCGCAACCCGCGAAACAAACCACC-----AGCCAAGCCGGCAAGCAATCCGCGCGCG
CCCATTGTTCTCTCTCTCCCTCTCAC-------------------TCAGCATCCTCTCCGACGGCATGGCCGCGCCCGCA
CCCGCCAAGAGGAGAGGCAGCGGCGGTGGCGGAGGCGGGGAGAAGAAGGATCTGTTCCACGTCGTCCACAAGGTGCCCGC
CGGCGACAGCCCCTACGTCCGGGCCAAGCACCTCCAGGTTGGTTAATCGTTCGCAGCTCCCTTCCTGCCCATGCAAATTC
TGCCTCCGCGTTCTCTCTCCATCTCTCGAGTGGATTTATTGTGGTTAAAACTTAAAACGGAAACTGGAATAGTATAT---
-------GTAGCC-TTGATTGTGCACCGGTTGCCCAATCATGATAACGGCCACCATGAAAGCAGACGTCCAA--------
--ACGTTTCCGTCGGCTTCGGGCGATTCTTGCCTTCTTGCTCTCGCCGCCAAATCTTCTTTGCTCCTCTTGGGCGGAAGA
AATCGTTGTTCGCCGAATCGGTCACTGTGCTAAGG----TTCTCCGTGTTGCCACGAATGGGCAGTGGTCCATCGC--GG
AGTCGACGTGCGTGCTTACTGAATGATTATGTTCTAATTACATCAAATTAAACTCAGTTACACCATA----ATTCATGAT
TAG---TAGCTGAACAAGAA-AAAAAACCACTTCCCT---AAAAAAAAGGATTTTTTTTTCCCTGCT-ACGTTAAATTGC
TGACTTGGGTGAAACGGCTTGGATTGATCAGCTCGTGGAGAAGGACGCGGAGGCGTCGGTCGTGTGGTTCTGGAAGGCGA
TCAACTCCGGGGACAGGGTGGACAGCGCGCTCAAGGACATGGCCGTGGTGATGAAGCAGCAGGACCGCGCTGAGGAGGCG
ATAGAGGCCATCAGATCCTTCAGGCACCTCTGCTCCAGGCAGGCCCAGGAGTCCCTCGACAACCTGCTCATTGACCTCTA
CAAGGTGCGTCTCAGTTGCATATCTCACAGGG-AAATCTGTTCAAGGGTCGATTCT----TGCATCAATTCTAAGCTGAT
ATGTCTCATTTTGATCTTCAGAAATGTGGAAAAGTCGACGAGCAGATAGAGCTGCTGAAACAGAAGCTCAAGATGATATG
CCTCGGCGAGGCCTTCAACGGGAAGATCACCAAGACGGCACGATCCCATGGCAAGAAGTTCCAGGTCTCGATCCAGCAGG
AGATGTCACGCATTCTGGTACGGGTTACTGCTCCCATGTTACTCTTACTGATTGCTAATTAGGCATGTCTTGGTCTGTCA
CTGCAGCAATATTCAGTTATACTCAGGTTACTGAAACTTTTGATGTGGGATTG--CAGGGTAACCTTGGCTGGGCTTACA
TGCAGCAGAAC------AACTATGAAGCCGCTGAATTGGTTTATCGAAAGGCCCAGACTATCGTACCTGATGCCAACAGG
GCGTGCAACCTCGGGCTGTGCCTGATTAAGCAGGGCAGACATGAGGAGGCAGTGCAAGTACTCGAGGACGTCCTACTTCG
CAGAATCTCAGGGTTGGATGACGACAAGGCGGTTGCCCGAGCCGAGCAGCTCCTCCGTGAGCTCGGTCCGACAACACATG
TTTCATCGCCCTTTGATATTGGCTTGAGTTTCACCGAAGAGATCATGGAGAGACTAGACCTTGTGATGAATGACTGGACA
CCGTTCAGGTCGAGGCGGCTGCCCGTATTCGAGGAGTTAGATGCATTCAGGGACCAAATGGCTTGTTGATTCGTTACTAA
GTCAGTTTTTTTATCTTTTAACGTGCATTTGTGTGTGGTAAATAGAAGTTGATGTGCATGTATGTAGGAGGT--------
----TTTGTGGATGTTACAGGTGTGAATGAGAGATTTGATAGATTGTAGATATCATAAGCAGCTAGGGTTGATGGAAAGC
GTTCCCTTGCGGAATAATGTGGTTTCAGTTTTGAATGCAGTTGGTCTTTGCCCAGGAATATGTTTAATTTGACCTCCTTA
GGATGTGATATTGTCATTTGGATTACTAACTTGCTTTAATTGCAAAAACTGAAATGATTCCTTTTCCTTTTGCTAAAAAG
CCC-AACACTGAGTGTAACATATTGCATACCAACTAAAATTTCATCCATTCAGGAGCCAGCTTGAGCGAACACCGCCAAA
ATCAAGAACTTGAGAACAAGTAAAAGAGACG--TGGTGCTGAATACGGATAAGTGAGCACTATATACACTCACAAAATAG
ACATGTGGTGATGGA-TACTCGTAAGAGATCAGTATATACACACACAAAAAAAA-----ACACAAACACTGCAAGAAGAC
ATCCCAGTATTTGTTGGATTGTTGAATCCAAGAGTTTGGTTCGTTACTGTATATTATCCTTAAGTGACAATCTCACTATG
TGTACAAAGG--------ACACAAAATAAAGAATGTGAACTCTGCAATGCTCTTTAACCCACAGTACGGATTTCAACGCC
GGGGACTCACCAGGCTAGCTCTTTTTGAAACCAAGGGTCTGCAACTTCAATTCCCAACCCTTCCTATTCCCAGCCGACTT
CTCTTGATCCTGAAAT-----------------ATATGTTACATTCAGTTTCATGCTCATGGCTCGCCCTCTTTCTCCCT
CATTGTTCTTGTGTGGTTTAATGTGGTGTGCAAGCCATGCTCGATGTTTTGGTTGTTGCTTCAGGCTCATGGCTCATCCT
CTTTCTTCCCCATTTTT-CTTGTGTGGCTTAATGAGGTGTGGTAGTCGTGCTCGATGTGTTGGTTA
>chr1B_1991
--------------------------------------------------------------------------------
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-----------------------------------------------------------------GCTGAAAATGGTATG
CCTTAGCGAGGCCTTCAACAAGAAAATCACCAAGATGACTCACTCCCACTGCAAGAAGTCTAACTCTCA-ATCCAGCAAG
AGTTGTTGTGCATTCTGGTATGGGTTACTTCTCCCCC-TTACCATTATTGATTGCTAATTGGGCATGCCACT--------
-----GCAATATTCAGTTGCACTAAAGTTACTCACACTTTTGATGTGCGATTG--CATGGTAACCTTGGCTGATCTTACA
TGCATCAGGCAACTACAAAGTACGAACTAGCTCAATTGGTGTATTGGAAGGAACAAACTATCGTACCTGATGCCAACGGG
GCATGAAACCTCGGGTTGTGCATGATTAAGCAGGA-AGACATGTGGTGGCAATGCAAGCACTTTCGACTGCCCTACTTCA
TAGAATCTCTGGGCTGGGCGAAAACAAGGCGATTGCCTAGGCCAAGAAATTCCGCCATGAGCTCTGTCCGACGACACCTG
TTTCATCTCCCTTTAATGTTGGCTTGATTTTAATCGAAGATACCATGGAGAGACTATACCTTGTGATGAATGAGTGGACG
CCATTCTGGATGAGGAGGCTGCCCGTATTTGAGGAGCTTGATGCATTCAGGGACCAAATGGCTTGCTGATTCGTTACTTA
ATCAGTTTTT-AATCTTTTAACGTGCATTTGTGTGTGGTAAATAGAAGTTGATGTGCATGTATATAGGAGGT--------
----TTTGTGGATGTTACAAGTGTGAATGAGAGCTTTGATAGATTGTAGATATCATCAGCAGCTAGGGTTGATGCAAAGC
GTTCCCTTGCGGAATAATGTGGTTTTAGTTTTGAATGCAGTTGGTCTTTGCCTAAAGATATGTTTAATTTAACCTCCTTG
GGATGTGAAATTGTCATGTGGATTACTCACTTGCTTTAATTTCATAAACTGAAATGATTCCTTTTCCTTTTGCTAAA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------S----------
-------S----------------SSSSSSSSSSS-------------------------------------------S-
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SSSSS---------------------------S
------------------------S-------S-S----S--S-S----S-------------------S----------
--S------------S-S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-------------------------S---------------------------
-------------S-------------------------------S---------------------------S------
--------------------------------------------------------------------------------
-------------------------S-----S---------------------S--------------------------
------------------S------------------------------------------------SSSS---------
------------------------------------------------S--S-S-S------------------------
---------------------S----------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S---------------------------------S-S--SS---------S------------S-
----SS---------S-------------------S--------------------------------------------
---------------------------------------S----------------------------------------
----------------------------------------------------------------------------S---
--------S------S----------------------------------------------------------------
-------------------------------------------S-----------------------------------S
-----------------------------------------------------------S----S---------------
---------------------S-----------------------------S----------------------------
-------------------------------------------------------------------------S------
-----------------------------------------------------------------------S--------
---S---------S------------------S-----------------------------------------------
-----------------S--------------------------------------------------------------
-------------S-------------------S----------S-----------------------------------
------------------------S-------------------S-----------------------------------
---S-----------S-----------------------------------------------------S----------
S------------------------------SS-----------------------------------------------
----------------------------S--------S-------S-----S--SSSSS----------S----------
----------------S------------------------S--------------------------------------
----------------------------------------------------------------------------S--S
-S-------S--SS----------S-------------------------------------------------------
-S-SS----------------------------------------S----------------------------S---S-
-------------S--------------------------------S-----------------------------S---
------------------------S--S-----------------------S------S-------
>forward_555
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GAAGCTGTACTGTCCGGCAT-----
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_2460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GCTCGGGGATGTCCTACTTC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_556
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AAGCTGTACTGTCCGGCATC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_2465
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------GGGATGTCCTACTTCG
CAGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
>forward_1936
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TCTA
CAAGGTGCGTCTCAGC----------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_3440
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
GTGGACTTGGCAACCTAGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------
