>input_sequence_46661
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---------------------------------------------------ATGATACCCCAACCTGAGAACTGCAAGCT
CATGAATCCTAGCTCAAATATGTCTTCCATGGAGGAGCCTCTGCTGCCTCTATTCCAGCGTAATCAGAAGTACTCTTCCT
CCAAGCAAGACAGAAGCAAATCATGCGATGTCCCAAACAGGTGTGCACCTTCCTTTCATCCAGACACTAATGTCAAAGCT
AGCCTCAGTACTCGCAATCATCCTCCAGCCACTAATGAAAACACCGATATAGTATCCACGCCGACTTTACAGCGGGTGCG
TTCTTCACCTTCTATATTCACATCAATCAAAGAAGCTCCCTGTGCACATGAGCTTGGCAAGCAAAGCCCTTCTGCACAAT
ACACACCATCAATTACAAGGCAGGCTATTGTTAGTGTCATCCTATACATCTCAATAGGAGTCACGGTGTACATGACAAAT
GTTGAAGGCTTCAAGGGGAAATCCACGTTTAAGTTAGTGGATGCCCTGTACTTCACCATCATAAGCTTGTGCACCATTGG
GTATGGTGACATAGTCCCTTGCACTACCTTCACAAAGGTGTTCACATGCTTGTTTCTACTAATAGGTGTTCGCTTTGTTG
ACATTATGCTAAATGGACTGTTGACAAATGTGCTAGACAAGCAGAGAACAGTCCTACTTAGCACAATGGATGACAATAAG
CTGAACAGGGTATTTGACACGTACATGATCGATGCTGCAAAGAAAAGGTCAAGAGGGAAGATGAAAGTACTACTTGCACT
AGGCGTTGTTGCAGGGACTATCTCAATTTGTACAATCATAGTACATGAGGTGGAGGGCCTAAATTGGATTGACAGCTTCT
ATTTATCAGTCATTTCTGTGACAACAGTTGGATATGGGGATTATGGCTTCTCAACTACAGCTGGAAGGCTCTCCGCGACC
GTGTGTCTGTTGGTGAGCACGTTGGCAGTTGGCAAGGCATTCTTGTTCCTAACGGATCTAAGGATGGACAGAAGGAACCG
ACGAACTACAAAATGGATCCTCCAGAAGAAAATGGACAATGAGCCACCTGCTGCAGACCTTGATAACGATGCAGCTGTAA
GGTATTGTAAATTTTCCATCAATTACCATGTCAAGGAATTTTGCACTT-GACATGCGCTTCTACTCTGCTGCTTATCTCG
TATCCAATGATTACATCATATT-----CTTATCTGGAAATTAAATTTATCTGATGATATGTTCTTTCTT-----CTTGCA
CGACAAAGAGCTAATAATTTCTCGTTCCTTTTAGTCTTTTACCAAACACTCAAGGAAACAATAAATATACTTGTGATATG
CATTGACACCTCAAAAAGTTACATTGAAGTTACTTTTCATCAGTTCGTCACAACCTCTACATCTTTCTTCTCATTAAATT
AATTTAGAAGTATGTTACTATGTC---TTACAGGGCAACTATGCCTTTTACGTTCAAGCAAGCTGCTTCACATGTGATTA
ACGTGTGATTGCCTTCTCCATATGCAACAGCAAATCAGACTTTATGATCTACAAGCTGAAAGAGATGGGGAAGATCGATG
AGAAAGATGTCACGATGATCTCAGACCAGTTTGATCAGCTAGGCCTTGCAAAATGTGGAAATGTTGCTCTTGCTGACATA
ATTGGAAACTTATGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----
>chr3D_1_TraesCS3D01G257700
AAACTCTGGATACAGGGTAAAGATATTCATGGCGCAGTCTCATTATGTACATTTATGTCAGAAGCTCAACTGCTTGCTTT
GGAGTTGGGACCTCTAAATCTTCCGGTCTTCGG-TAAAATCTGCACGAAGTTGTACAGTTTTGCCTACAGCCTTCTCACC
AGATCGCATGATCCATACAGACACCGACCACTCGAAGAGACATAGATGACCCGGAACAAAGTTCCTTCAGCTTGAGAAGC
TTTCAGTCGGCACAATCGTACCTCCCTCACCGACAACAAGATCTGAGCACCACAAGAAATTGACATGTCCCCACTACTCC
AGTTGCAGAACGGAGTCCTGCAGAATATGGCACTGCCTTTATTCCGACGGATCATCCCAGAGAGCGGAGGACCAACTTGC
AAGACCAGAAGGTTGATAAGCCA---------TTGTCATTTGCCAACTTGGTACCTGCACCAAAATGTAACACGAAATTT
AATGTTGGAGAACCTAATTAGCGCACGTGCAGCAAGTGGCAAGCCAGTGCATGGTTACTCCTGCAACAACACAGGGAACT
ACGAAGATCACCCTTAACCGGAGCATACAGAATGATGCACTACAAATCCACAATCGCTCAGCATAGAAGTTTGCAGTGTT
ACTAAAGGCTAGAAGTGAGAATCCCCCGCAAAGAAAGGAGAACAAGAGGTGGGAATTCACAGTATAGCAAATCCATTTTA
ATTTTGGAGATGAACCTAGTAATTTAGTTTCTGATATCAAAAGAAAGTGTCAGATAA-GAAGGAACGAATATGCCCACCC
TTTCTGTCCCTTTCATCAGTTGCCTCTTGTATCAACAACTATGCAAGATACTAGAAACTACATGATTTAAATGCTGGAAT
AAATAAGAATGATATGCTTCAAGATCTTTTCACCTCAGAAACACCAGGGAAGTGTACATCCCTGGTTGACTGTCTGATGG
TTACCGCTTCCATTGTCTAGATCTCAGCAGAACCACCATGTATATAAAGTGATGATACCCCAACCTGAGAACTGCAAGCT
CATGAATCCTAGCTCAAATATGTCTTCCATGGAGGAGCCTCTGCTGCCTCTATTCCAGCGTAATCAGAAGTACTCTTCCT
CCAAGCAAGACAGAAGCAAATCATGCGATGTCCCAAACAGGTGTGCACCTTCCTTTCATCCAGACACTAATGTCAAAGCT
AGCCTCAGTACTCGCAATCATCCTCCAGCCACTAATGAAAACACCGATATAGTATCCACGCCGACTTTACAGCGGGTGCG
TTCTTCACCTTCTATATTCACATCAATCAAAGAAGCTCCCTGTGCACATGAGCTTGGCAAGCAAAGCCCTTCTGCACAAT
ACACACCATCAATTACAAGGCAGGCTATTGTTAGTGTCATCCTATACATCTCAATAGGAGTCACGGTGTACATGACAAAT
GTTGAAGGCTTCAAGGGGAAATCCACGTTTAAGTTAGTGGATGCCCTGTACTTCACCATCATAAGCTTGTGCACCATTGG
GTATGGTGACATAGTCCCTTGCACTACCTTCACAAAGGTGTTCACATGCTTGTTTCTACTAATAGGTGTTCGCTTTGTTG
ACATTATGCTAAATGGACTGTTGACAAATGTGCTAGACAAGCAGAGAACAGTCCTACTTAGCACAATGGATGACAATAAG
CTGAACAGGGTATTTGACACGTACATGATCGATGCTGCAAAGAAAAGGTCAAGAGGGAAGATGAAAGTACTACTTGCACT
AGGCGTTGTTGCAGGGACTATCTCAATTTGTACAATCATAGTACATGAGGTGGAGGGCCTAAATTGGATTGACAGCTTCT
ATTTATCAGTCATTTCTGTGACAACAGTTGGATATGGGGATTATGGCTTCTCAACTACAGCTGGAAGGCTCTCCGCGACC
GTGTGTCTGTTGGTGAGCACGTTGGCAGTTGGCAAGGCATTCTTGTTCCTAACGGATCTAAGGATGGACAGAAGGAACCG
ACGAACTACAAAATGGATCCTCCAGAAGAAAATGGACAATGAGCCACCTGCTGCAGACCTTGATAACGATGCAGCTGTAA
GGTATTGTAAATTTTCCATCAATTACCATGTCAAGGAATTTTGCACTT-GACATGCGCTTCTACTCTGCTGCTTATCTCG
TATCCAATGATTACATCATATT-----CTTATCTGGAAATTAAATTTATCTGATGATATGTTCTTTCTT-----CTTGCA
CGACAAAGAGCTAATAATTTCTCGTTCCTTTTAGTCTTTTACCAAACACTCAAGGAAACAATAAATATACTTGTGATATG
CATTGACACCTCAAAAAGTTACATTGAAGTTACTTTTCATCAGTTCGTCACAACCTCTACATCTTTCTTCTCATTAAATT
AATTTAGAAGTATGTTACTATGTC---TTACAGGGCAACTATGCCTTTTACGTTCAAGCAAGCTGCTTCACATGTGATTA
ACGTGTGATTGCCTTCTCCATATGCAACAGCAAATCAGACTTTATGATCTACAAGCTGAAAGAGATGGGGAAGATCGATG
AGAAAGATGTCACGATGATCTCAGACCAGTTTGATCAGCTAGGCCTTGCAAAATGTGGAAATGTTGCTCTTGCTGACATA
ATTGGAAACTTATGAGTATGTATTATGTAAATAAGAGAAATATATCATACTTCAATGATAGATATCATTGATACTTTGCT
AACTAGAAATCAAAATTTAA-----------------------------ACATGTACACGTGACCTATTTAATACCCTTC
CATATTACAAGTAGTCGAAACATTGTCTATCACTGTTGATCTTGGAGTCATACATTGTCGTATACAATTGAACTTGGAGT
CATATTTCTTGTAATGTGGTTGGCCATAGCCACAGCTTCAGGGTTTCTTTACATA-TTTTCTCACCCGGATTGTATGGAT
ATGTAATTAAGGATACAGGGAAGAACTGGATAGGACGAGTTTTGTGCAGTGTAATTAAAGCAATGGGACAACTTACCAAA
GAAAGAGACAGAGCTTGACACGATGAATTCAATGTTTTGTAGTTTGCCATCATCTCAAGCCATCAGATCCACTCTCACTT
ACTGTGTTATCCGAAATGTTAGCAATCCTGGAAAAGTTAGTTACTGTAATGAAGCTCAAGCATATTTGGTTTGGGGATGC
CAAAAAAAGCCAGATGCAGAACATATATTAGTGCATTTGTGACTTTTCGTGCTCCTCCTTCAAGACTAACCTTTCTCTAG
TTTCAGTTATAAGCTTCAATATGGTTGACAATTTGTGCAACTTGTCATTTACAGACTGCTGAGTGTCCAACTCTTTTGCT
AATTGGGAACTGGCGTAGTGATCAATTTCACATTGTAATGAACTCAGCTGTGAATCAATATGCTGCACAAAATCATCATA
TGCAGAATGATCATCCATGATGTTTGTTGGGTCATGATCCTTGGAGAATGTGAAGCTATCAGCCATCTGAAGTTCACTTC
CCTTGGATTGGCCAGCCACGTTTGAATCACTAGTCTCATCCACCCGATCATCAATTTTACCGGAGAACACTCTTATATGG
TCATTGGAGTCTTCAACAGTAGCCATCCCTGGACGCAACGCGTGTTCAATTAACATATTCTGCTTCACCGAAATAACCTG
GATAC
>chr3B_1
AAACTCTGGATACAGGATAAAGATATTCATGGCGCAGTCTCATTATGTACATTTATATCAGAAGCTCGACTGCTTGCTTT
GGAGTTGGGACCTCAAAATCTTCTGGTTTTC-G-TAAAATCTGCACGAAGTTGTACAGTTTTGCCTACAGCCTTCTCCCC
AGATCGCATGATCCATACAGACATCGACCACTCGAAGAGACATAGATGACCCGGAACCAAGTTCCTTCAGCTCGAGAAGC
TGTCAGTCGGCACAATTGTACCTCCCTCACCGACAACAAGATCTGAGCACCACAAGAAATTGACATGTCCCCACTACTCC
AGTTGCAGAACGGAGTCCTGCAGAATATGGCACTGCCTTAATTCCGCTGGATCATCCCAGAGAGCGGGGGACCAACTTGC
AAGATCAGAAGGTTGATAAAAGCCATTGTCATTTGT-------CAACTTGGTACCTGCACCAAAATGTAACACGAAATTT
AATGTTGGAGAACCTAAATAGCGCACGTGCAACAAGTGGCGAGCCAGTGCATGCTTACTCCTGCAACAACACAGGAAACT
ATGACGATCACCCTTCACCGGAGCATACAGAATGATGCACTACAAATCTACAATCGCTTAGCATAGAAGTTTGCAATGTT
ACTAAAGGCCGGAG----GAATCCCCGGCAAAAATAGA--AGCTAGAGGTGGGAATTCACAGTATAGCAAAACCGTTTTA
ATTTTGGAGATGAACCTAGCAATTTAGTTTCTGATATCAGACGAAAGTGTCAGAAAAGGAAGGAACGAATATGCCCACCA
TTGCTGTCCCTTTCATCAGTTGCCTCTTGTATCAACAACTATGCAAGATACTAGAAACTACATGATTTAAATGCTGGAAT
AAATAAGAATGATATGCTTCAAGATCTTTTCACCTCAGAAACACCAGGGAAGTGCACATCCCTGGTTGAATGTCTGATGG
TTACCGCTTCCATTGTCAAGGTCTCAGCAGAACCACCATGTATATAAAGTGATGATAGCCCAACATCAGAGATGCAAGCT
CATGAATCCTAGCTCAAATATGTCTTCCATGGAGGAGCCTCTGCTGCCTCTATTCCAGCGTAATCAGAAGTACTCTTCCT
CCAAGCAAGACAGAAGCAAATCATGCGATGTCACAAACAGGTGTGCACCTTCCTTTCATCCAGACACTAATGTCAAAGCT
AGCCTCAATACTCTCAATCATCCTCCAGCCACTAATGAAAACACCAATATAGTATCCACACCGACTTTACAGCGGGTGTG
TTCTTCACCTTCTATATTCACATCAATCAAAGAAGCTCCCAGTGCACATGAGCTTGACAAGCAAAGCCCTTCTGCACAAT
ACACACCATCAATCACAAGGCAGGCTATTGTTAGTGTCATCCTATACATCTCAATAGGAGTCATTGTGTACATGACAAAT
GTTGAAGGCTTCAAGGGGAAATCCACGTTTAAGTTAGTGGATGCCCTGTACTTCACCATCATAAGCTTGTGCACCATTGG
GTATGGTGACATAGTCCCTTGCACTACCTTCACAAAGGTGTTCACATGCTTGTTTCTACTAATAGGTGTTCGCTTTGTTG
ACATTATGCTAAATGGGTTGTTGACAAATGTGCTAGACAAGCAGAGAACAGTCCTACTTAGCACAATGGATGATAATAAG
CTGAACAGGGTATTTGACACGTACATGATCGATGCTGAAAAGAAAAGGTCAAGAGGGAAGATGAAAGTACTACTTGCACT
AGGCGTTGTTGCAGGGTCTATCTCAATTTGTACAATCATAGTACATGAGGTGGAGGGCCTAAACTGGATTGACAGCTTCT
ATTTATCAGTCATTTCTGTGACAACAGTTGGATATGGGGATTATGGCTTCTCAACTACAGCTGGAAGGCTCTCCGCGACC
GTGTGTCTGTTGGTGAGCACTTTGGCAGTTGGCAAGGCATTCTTGTTCCTAACGGATCTAAGGATGGACAGAAGGAACCG
ACGAACTACAAAATGGATCCTCCAGAAGAAAATGGACAATGAGCCACTTGCTGCAGACCTTGATAACGATGCATCTGTAA
GGTATTGTAAATTTTCCATCAATTACCATGTCAAGGAATTTTGTACTTGAACATGCGCTTCTACTCTGCTGCTTATCTCG
TATCCAATGATTACAGCATATTATTTCCTTATCTGAAAATTAAATTTATCTGATGATAGGATCTTTCTTAATTTCTTGCA
CGACAAAGAGCTAATAATTTGTCGTTCCTTTTAGTCTTTTACCAAACACGCAAGAAAACAATAAATATACTTGTGGTATG
CATTGACACCTCAAAAACATACATGGAAGTTACTCTTCATCAGTTCATCACAACTTCTACATTGTTCTTCTCATTAAACT
AATTCAAAAGTATGTTACTATGTCGCATTACAGGGCAACTATGCCTTTTACGTTCAAGCAAGCTACTTCACATGCGATTA
ACGTGTGATTGCCTTCTCCATATGCAACAGTAAACCAGACTTTATGATCTACAAGCTGAAAGAGATGGGGAAGATCGATG
AGAAAGATGTCACGATGATCTCAGACCAGTTTGATCAGCTAGGCCTTGCAAAATGTGGAAATGTTGCTCTTGCTGACATA
ATTGGAAACTTATGAGTATGTATTATGTAAATGCTAGAAATATATCATGCCTCAGTGATAGATAACATCTG---------
-------------------ATACTTTGCTAACTAGCAATCAAAATCTAAACATGTACACGTGACCTATTTAATACCCTTT
CATGTTACAAGTAGTCGAAACACTGTGTATCACTGTTGATCTTGGAGTCGTACATTGTCATATACAATTGAACTTGGAGT
CATATTTCTTGTAATGTGGTTGGTCATAGCCACAGCTTCAAGGTTTCTTCACATA-TTT-CTCACCCGGATTGTATGGAT
ATGTAATTAAGGATACAGGGAAGAACTGGATAGTACGAGTTCAGTGCAGTGTAATTAAAGCAATGGGACAACTTACCAAA
GAAAGAGACAGAGCTTGACAAGATGAACTCAATGTTTTGTAGTTTGCCATCATCTCAAGCCATCAGATCCACTCTCACTT
ACTGTGTTATCCGAAATCTTCGCAATCCTGGAAAAGTTAGTTACTGTAATGAAGCTCAAGCATATTCAGTTTGGGGATGC
CAAAAAGAGCCAGATACAGAACATATATTAGTGCATTTGTGACTTTTCGTGCTCCTCCTTCAAGACTAACCTTTCTCTAG
TTTCAGTTATAAGCTTCAATATGGTTGATAATTTGTGCAACTTGTCATTTATAGACTGCTGAGTGTCCAACTCTTTTGCT
AATCGGGAACTGGAGTAGTGATCAATTTCGCATTGTAATGAACTCAGCTGTGAATCAATATGCTGCACAAAATCATCATA
TGCAGAATGATCATCCATGATGTTTGTTGGGTCATGGTCCTTGGAGAATGTGAAGCTATTAGCCATCTGAAGTTCACTTC
TCTTGGATTGGCCAGCCACGTTTGAATCACTAGTCTCATCCACCCGATCATCAATTTTACCGGAGAACACTCTTATATGG
TCATTGGAGTCTTCAACAGTAGCCGTCCCTGGACGCAACGCGTGTTCAATTAACATATTCTGCTTCACTGAAATAACCTG
GATAC
>chr3A_1
AAACTCTGGATACAGGATAAAGATATTCATGGCGCAGTCTCATTATGTACATTTATGTCAGAAGCTCGACTGCTTGCTTC
GGAGTTGGGACCTCTAAATCTTCCAGTCTTC-GGTAAAATCTGCACGAAGTCGTACAGTTTTGCCTACAGCCTTCTGTCC
AGATCGTATGATCCATACAGACACCGACCACTCGAAGAGACATAGATGACCCGGAGCCAAGTTCCTTCAGCACGAGAAGC
TTTTAGGCGGCGCAATCGTACCTCCCTCACCGACAACAAGATCTGAGCACCACAAGAAATTGACATGTCCAC---ACTCC
AGTTGCAGAACGGAGTCCTGCAGAATATGGCACTGCCTTAATTCCGATGGATCACCCCAGAGAGCGGAGGACCAACTTGC
AAGATCAGAAGGTTGATAAGCCA---------TTGT-------CAACTTGGTACCTGCACCAAAATGTAACACGAAATTT
AATGTTGGAGAACCTAATTAGCGCACGTGCAGCAAGTGGCGAGCCAGTGCATGGTTACTCCTGCAACAACACAGGGAAC-
ACGAAGATCACCCTTAACCGGAGCATACAGAATGATGCACTACAAATCCAAAATCGCTCAGCATA-AAGTTTGCAGTGTT
ACTAAAGGATAGAAGTGAGAATCCCCCGCAAAGAAAGGAGAGCAAGAGGTGGGAATTCACAGTATAGCAAATCCGTTTTA
ATTTTGGAGATGAACCTAGTAATTTAGTTTCTGATATCAAAAGAAAGTGTCAGATAA-GAAGGAACGAATATGCCCACCC
TTTCTGTCCCTTTCATCAGTTGCCTCTTGTATCAACAACTATGCAAGATACTAGAAACTACATGATTTAAATGCTGGAAT
AAATAAGAATGATATGCTTCAAGATCTTTTCACCTCAGAAACACCAGGGAAGTGTACATCCCTGGTTGACTGTCTGATGG
TTACCGCTTCCATTGTCTAGATCTCAGCAGAACCACCATGTATATAAAGTGATGATACCCCAACCTGAGAACTGCAAGCT
CATGAATCCTAGCTCAAATATGTCTTCCATGGAGGAGCCTCTGCTGCCTCTATTCCAGCGTAATCAGAAGTATTCTTCCT
CCAAGCAAGACAGAAGCAAATCATGCGATGTCCCAAACAGGTGTGCACCTTCCTTTCATCCAGACACTAATGTCAAAGCT
AGCCTCAGTACTCTCAATCATCCTCCAGCCACTAATGAAAACACCAATATAGTTTCCACGCCGACTTTACAGCGGGTGCA
TTCTTCACCTTCTATATTCACATCAATCAAAGAAGCTCCCTGTGCACATGAGCTTGGCAAGCAAAGCCCTTCTGCACAAT
ACACACCATCAATTACAAGGCAAGCTATTGTTAGTGTCATCCTATACATCTCAATAGGAGTCACGGTGTACATGACAAAT
GTTGAAGGCTTCAAGGGGAAATCCACGTTTAAGTTAGTGGATGCCCTGTACTTCACCATCATAAGCTTGTGCACCATTGG
GTATGGTGACATAGTCCCTTGCACTACCTTCACAAAGGTGTTCACATGCTTGTTTCTACTAATAGGTGTTCGCTTTGTTG
ACATTATGCTAAATGGACTGTTGACAAATGTGCTAGACAAGCAGAGAACAGTCCTACTTAGCACAATGGATGACAATAAG
CTGAACAGGGTATTTGACACATACATGATCGATGCTGAAAAGAAAAGGTCAAGAGGGAAGATGAAAGTACTACTTGCACT
AGGCGTTGTTGCAGGGACTATCTCAATTTGTACAATCATAGTACATGAGGTGGAGGGCCTAAATTGGATTGACAGCTTCT
ATTTATCAGTCATTTCTGTGACAACAGTTGGATATGGGGATTATGGCTTCTCAACTACAGCTGGAAGGCTCTCCGCGACT
GTGTGTCTGTTGGTGAGCACGTTGGCAGTTGGCAAGGCATTCTTGTTCCTAACGGATCTAAGGATGGACAGAAGGAACCG
ACGAACTACAAAATGGATCCTCCAGAAGAAAATGGACAATGAGCCGCTTGCTGCAGACCTTGATAACAATGCAGCTGTAA
GGTATTGTAAATTTTCCATCAATTACCATGTCAAGGAATTTTGTACTT-AACATGCGCTTCTAGTCTGCTGCTTATCTCG
TATCCAATGATTACATCATATTATTTCCTTATCTGGAAATTAAATTTATCTGATGATATGATCTTTCTT-----CTTGCA
CGACAAAGAGCTAATAATTTCTCATTCCTTTTAGTCTTTTACCAAACACGCAAGGAAACAATAAATATACTTGTGATATG
CATTGACACCTCAAAAACTTACATGGAAGTTACTTTTCATCAGTTCGTCACAACCTCTACATCTTTCTTCTCATTAAATT
AATTTAAAAGTATGTTACTATGTC---TTACAGGGCAACTATGCCTTTTACGTTCAAGCAAGCTACTTCACATGTGATTA
ACGTGTGATTGCCTTCTCCATATGCAACAGCAAATCAGATTTTATGATCTACAAGCTGAAAGAGATGGGGAAGATCGACG
AGAAAGATGTCACGATGATCTCAGACCAGTTTGATCAGCTAGGCCTTGCAAAATGTGGAAATGTTGCTCTTGCTGACATA
ATTGGAAACTTATGAGTATGTATTATG--------AGAAATATATCATACTTCAATGATAGATATCATCTG---------
-------------------A-----------------------------ACATGTACACGTGACCTATTTAATACCCTTC
CATATTACAAGTAGAAGAAACACTGTCTATCACTGTTGATCTTGGAGTCGTACATTGTCGTATACAATTGAACTTGGAGC
CGTATTTCTTGTAATATGGTTGGTCATAGCAACAACTTCAGGGTTTCTTTACATATTTT-CTCACCCGGATTGTATGGAT
ATGTAATTAAGGATACAGGGAAGAACTGGATAGTACGAGTTTTGTGCAGTGTAATTAAAGCAATGGGACAACTTACCAAA
GAAAGAGACAGAGCTTGACATGATGAATTCAATGTTTTGTAGTTTGCCATCATCTCAAGCCATCAGATCCACTCTCACTT
ACTGTGTTATCCGAAATCTTCGCAATCCTGGAAAAGTTAGTTTCTGTAATGAAGCTCAAGCATATTCGGTTTGGGGATGC
CAAGAAAAGCCAGATACAGAACATATATTAGTGCATTTGTGACTTTTCGTACACCTCCTTCAAGACTAACCTTTCTCTAG
TTTCAGTTATAAGCTTCAATATGGTTGACAATTTGTGCAACTTGTCATTTATAGACTGCTGAGTGTCCAACTCTTTTGCT
AATTGGGAACTGGTGTAGTGATCAATTTCACATTGTAATGAACTCAGCTGTGAATCAATATGCTGCACAAAATCATCATA
TGCAGAATGATCATCCATGATGTTTGTTGGGTCGTGATCCTTGGAGAATGTGAAGCTATCAGCCATCTGAAGTTCACTTC
TCTTGGAGTGGCCAGCCAAGTTTGAATCACTAGTCTCATCCACCCGATCATCAATTTTACCGGAGAACACCCTTATATGG
TCATTGGAGTCCTCAACATTAGTCGTCCCTGGACGCAACGCGTGTTCAATTAACATATTCTGCTTCACCGAAATAACCTG
GATAC
>SNPs
----------------S--------------------------------------------------S------------
-------------------------------S---------------------------------------------S--
---------------------------------------------------------S--------------S-------
--------------------------------------------------------------------------------
---------------------------------------S-------S--------------------------------
----S-------------------------------SSSSSSS-------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------S-------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------------------------------------------S-----S------------------------------
------------------------------------------------------------S-------------------
-------------------------------------------------S------------------------------
-----------------S------S-------------------------------------------------------
------S---------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------SSS---------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-------------------------------------------------------------
----------------------S--------------------------S------------------------------
-----------------------S-----------------------------------S--------------------
---------------------------------S----------------------------------------------
--------------------S-----------------------------------------------------------
-----------------S--S---------------------------------------------S-------------
---------------S----------------------------------------------------------------
---------------------------------------------------S----------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----
>forward_682
--------------------------------------------------------------------------------
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----------------------CCCCCGCAAAGAAAGGAGAA--------------------------------------
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>reverse_2130
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------GACATGCGCTTCTACTCTGC-----------
--------------------------------------------------------------------------------
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>forward_1718
--------------------------------------------------------------------------------
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-----------------CACGTACATGATCGATGCTGC------------------------------------------
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>reverse_3332
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------CAGACTGCTGAGTGTCCAACT--------
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