>input_sequence_46610
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--ATGTGTGCTGCAATGGCGTTCATGGGGCGGATGGCCGGCAGTCGCATTTTCTCAGAGCTGTGCGGCTCGATCGTGAAT
CTGAGGATGTACTCTTCGAGGGTGGACTGGAAGCAGCTGCGGCCCATGATTCTAAAGAGGATCAAGAACCGAACAAAGGA
TTATCCTATCAAGCGAATGATCCCGGTGGCCCAGGAGGTGGTCAGGGCCAGAGAGATTCTCACTGAAGGCGTCTCGATAC
TCCTCAGAGCTGTCCCTGTACATTCATGCAAGTAAGGGCAACAAGTATGAAATTATTAAG-TTTTTGTCTTAT-CATAGG
AGGATACAATACAATAAACTTGGTCTTCTCGTTTGTTGCTGAAAGTTCCTTGCTTTGC-----ATCATTATCCAGTTTAG
GTATTGCAAGAAGTCTGAAGAAATGGCAAAAC-AATTCAACAAAAATAAGTACTATAGAAGATTGGTGTTCATAGGCTAG
TGTTATTGTTTCCATATACATTCATGCAAGTAA--GCAAGAAATATGAAATTA-TAAGTGTTTTCCACTTGATCATAGGA
GGATAA--------AATACAATAATAAACTTCGTCTTCTTGTTTGTTGCTGAAAGATCCTTATTTTGGCAGATCATCAGC
AAAGGTATTGCTAAGAAGTCTGAGGAAATGGACAGATAATTAAACAGACATACGTAGAATATTAGTGTTCCTAAACTAGT
ATTGTTGTTGTGTAATGTTGTTGCCAAGTTTGCCTTTTAGTCTGAGTGAATTCCAGTTACTCAAGCAGTCCTCTTTGATT
TTCACATTTGTTCTCATTTGTTGATCAGAGTGGACCTTTCTGCATTATTCATTCAGATGTTTTATGTGCTGTCATTTTAA
TTAGTGATTTATGTTTTGACTCATCCTGTAGGTTTTGTCCTGAAATTCATGTTGGAGCAATGGCACATCAGATGAAATCA
TGTCACGGTTTCAAACGTATGATCAAGGATCGACCTCACCAATGGGGCCCAGGCGGCTTGAATAACATCCTTGTCCCTGT
TGAGGCCTTCCATCAGGAAAACATGTTTCAGGATGAGATAAGGCATGACCAGAGGTTCGACTTCACTCGTGTCCCGGCTG
TACTCGAGCTATGTCATCAGGCAGGTGCAGAGCTACCTGAAGGACTCCTATACAGACGTGATGAGCTATGTACGGCAGCT
GAAGCTAACAACCAAAATCCTGCCCCTTTGCTATCTTCTGAACTTAGATTGGTAGGTCAAAGAACACTGGAAGCATGGGA
AAGGCTCAGATTAGGTGTGACAAAACTCCTATTGGTCTACCCATCCAAAGTGTGCGAGAATTGCTCTGAAGTGCATGTTG
GGATATCAGGGCACAAGGCCAGGATGTGTGGAGTATTTAAGTTTGAGGGCTGGCGGGGAAAACACAAGTGGAAGAAGGCT
GGAGTGGATGACCTGGTTCCTCAAAAGATTGTGTGGCATCAGCGGCCTCATGACCCACCAATTCTGGTGGACAGTGGGCG
AGATTATTATGGTCATGCTCCTGCTGTTGTGGAGCTTTGTGTGCAAGTAGGTGCAAGAGCATCACCAAAATATAATTGCA
TGATGAAGGAGCATGGCTTGGCACCACCTGTTCAAAGAGACCAGGCCACATAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------
>chr2D_1_TraesCS2D01G474900
AGGTTTGGTGAGAAACATTTGAAAATAGCACCGTTCACGCCCGAATTTTTCTTTTTTGCCTCGCGCTCCTCGTTCAAACT
TCACCAAATTTTGCATGAAAATCACACACATGGACATCTTGCTTGCAAAAAAATTCAGAATTTTTTCATATTTTTTCTAT
TTCTAACCTTGTTTTGAGAAAAAATTTATATTTCTAACCACTGTACTGTTGAGC-------------CCGGGCACTGAAG
TGGATATTCGTTGGGCTTTCTCTAAATTTTCGGAGTTCGTTGGGCTTTCTCTAAATTTCCCGCAAAAAAA----------
-----------------GAAGTTCGCTGGGCTTAGATCTCACCGAAACGTCCTTACCATTATTGGGCTGGGCCCAGGTTA
ACTCCGCTGCCGATCCCTAATTCGTTCGGCTGAGCCCAAAGCCTGGCAGCCGGAGGCGAATCGATCGATCGGGCACGCCG
TCGCATTTCTTCCATCCTCCCCCGCCCGCCCGGCCGCGCCGCCGTCCGTGCCGGCCGTAGCGTCTCGTCTCGCTCACAGG
CTGCGCACCACCGCTTCCCTCAAAGCTCGCTCCACCTCTCGCCACCCAGCGCCGACGCCTTCCTCGGCTGCTCGACGGCG
CCCGGCGCTTCCCCGGACCCGAGGCGAGCGGCGGTGCTCGTCAGATCCGCGGGTGCGGCGCCGCCACCGAGGGGAAGGAG
ACCCTGTGCGTCTCCGCTCTATTGCGGGCGGCTCCCCGTCCCATCTCCTCCG-CCGCTCCCCTCCATTGGCTGCCGCGCC
GCCAGCGAGCTCAAGGAGACCGGCGGACTGCGGGCAAGGTAATCGTCCGTCATCCCCTTCCCTCGTTCCCCTTCTCATCT
TCTGGAGAAGCATCGACGCAACACCCAGGTGGAGAAAGCAATAAAATTTAGAGGAAATGTACATGTTCCGTTTGTTGTTC
GTCATATCTCCTGCTAATAATAATACTACCATGGATGCCTGTTTCCTGTCCTTATGAAAAACAATTTTGAACCTGTA-GG
CTATGTGTGCTGCAATGGCGTTCATGGGGCGGATGGCCGGCAGTCGCATTTTCTCAGAGCTGTGCGGCTCGATCGTGAAT
CTGAGGATGTACTCTTCGAGGGTGGACTGGAAGCAGCTGCGGCCCATGATTCTAAAGAGGATCAAGAACCGAACAAAGGA
TTATCCTATCAAGCGAATGATCCCGGTGGCCCAGGAGGTGGTCAGGGCCAGAGAGATTCTCACTGAAGGCGTCTCGATAC
TCCTCAGAGCTGTCCCTGTACATTCATGCAAGTAAGGGCAACAAGTATGAAATTATTAAG-TTTTTGTCTTAT-CATAGG
AGGATACAATACAATAAACTTGGTCTTCTCGTTTGTTGCTGAAAGTTCCTTGCTTTGC-----ATCATTATCCAGTTTAG
GTATTGCAAGAAGTCTGAAGAAATGGCAAAAC-AATTCAACAAAAATAAGTACTATAGAAGATTGGTGTTCATAGGCTAG
TGTTATTGTTTCCATATACATTCATGCAAGTAA--GCAAGAAATATGAAATTA-TAAGTGTTTTCCACTTGATCATAGGA
GGATAA--------AATACAATAATAAACTTCGTCTTCTTGTTTGTTGCTGAAAGATCCTTATTTTGGCAGATCATCAGC
AAAGGTATTGCTAAGAAGTCTGAGGAAATGGACAGATAATTAAACAGACATACGTAGAATATTAGTGTTCCTAAACTAGT
ATTGTTGTTGTGTAATGTTGTTGCCAAGTTTGCCTTTTAGTCTGAGTGAATTCCAGTTACTCAAGCAGTCCTCTTTGATT
TTCACATTTGTTCTCATTTGTTGATCAGAGTGGACCTTTCTGCATTATTCATTCAGATGTTTTATGTGCTGTCATTTTAA
TTAGTGATTTATGTTTTGACTCATCCTGTAGGTTTTGTCCTGAAATTCATGTTGGAGCAATGGCACATCAGATGAAATCA
TGTCACGGTTTCAAACGTATGATCAAGGATCGACCTCACCAATGGGGCCCAGGCGGCTTGAATAACATCCTTGTCCCTGT
TGAGGCCTTCCATCAGGAAAACATGTTTCAGGATGAGATAAGGCATGACCAGAGGTTCGACTTCACTCGTGTCCCGGCTG
TACTCGAGCTATGTCATCAGGCAGGTGCAGAGCTACCTGAAGGACTCCTATACAGACGTGATGAGCTATGTACGGCAGCT
GAAGCTAACAACCAAAATCCTGCCCCTTTGCTATCTTCTGAACTTAGATTGGTAGGTCAAAGAACACTGGAAGCATGGGA
AAGGCTCAGATTAGGTGTGACAAAACTCCTATTGGTCTACCCATCCAAAGTGTGCGAGAATTGCTCTGAAGTGCATGTTG
GGATATCAGGGCACAAGGCCAGGATGTGTGGAGTATTTAAGTTTGAGGGCTGGCGGGGAAAACACAAGTGGAAGAAGGCT
GGAGTGGATGACCTGGTTCCTCAAAAGATTGTGTGGCATCAGCGGCCTCATGACCCACCAATTCTGGTGGACAGTGGGCG
AGATTATTATGGTCATGCTCCTGCTGTTGTGGAGCTTTGTGTGCAAGTAGGTGCAAGAGCATCACCAAAATATAATTGCA
TGATGAAGGAGCATGGCTTGGCACCACCTGTTCAAAGAGACCAGGCCACATAAGAAGTTCATTGCTTAGCTAGGTCTGTG
CATGATGACGATGTTATACGGTAGCTGTACATATCAGGTAACAAGAGACCACAAGAGACC----------CTTTTGGATG
TGGAGCGAATCTAGGGTTACTAAAATTGTACTTTTGCAGAATTCATGTGAATCAAATGAGGCAGGTAGCAATCCATTTTG
AAGGTTATCTGTGTTACTCAGGACAGTAGGTGAGAAGGAAAACACTGTTCATGTTTACCAATTAGCTGAATTTCCTCTGA
TGATATCAGGCAATTTCTTTCAGTGGGAGACTTAACTGCATTGTAAATTATCCAGAAGGCCAGAATGGAATATTTGGG--
-CCTTAGTTTGTGCCGGCTCATTGAAAATCGAGGGATGGTAGCTCTGCCTTGCTACTGTAACATCAAGTGTTGTCATT--
TTTTTTGTGGGAGTTCTTTTTCCAAGGGGATTACTGGA-CAGTTTGTTCACATTACCTAGATGTCATACCATTACTCTTT
TCTGATAGCCCTATGGGCAATTTTGTTATAAGCAAGCTATGTAGAGGGAACTCACTTGCTGCAAGTTGGTACTGTGTGTG
AACATCACAAATAACTTATGTACTGCTTTCATAAGCACCCCTTTTTGAAGTGTGATCTGTACACACAACCTAGCTTGGCC
CCCTTTTTGT----------------------GTACTGATTATTCCAGCCACATTGGCTGATAAGCTGGGTATAAATGAA
TTTCATGTACATTAAAGCTGAGTGTGTATATGCTTTCCACATGTTTTTTTGTTGTTATTGTAATATATCTGTATCCGCTG
AAAAGTACTCCCTTTGTAT--CAAAATGTAAGATGTTTTTGAGTCTCAGTCTAAACCAAAAAATGTCTTACATTTTGATA
AAGAGGGAGTGCTTTGTACTGAGTGGACTCTGTTA-GGCATCTTCAATAATTTGTACTGTATGTAATAAGTATGTAAATA
TGTTTTTCATTTGTTGTATGTCATTCTGGAAACATGTTTCTGCAATGTATGCTT
>chr2B_8
-------GTGAGAAACATTTGAAAATAGCACTGTTCATGTCCGAATTTGTCTTCTTTGCCGCGCGCCCCTCGTTCAAACT
TCACCAAATTTTGCACGAACATCACACACATGGACATCCTGCTTGAAAAAAAAATCGGATTTATTATTATTATT------
------------------------TTTCTATTTCTGATCACTGTACTGTTCATCGGGCTCATCTGAGCCCGGGACCTAAG
TGGATATT----------------------CGGAGTTCGTTGGGCTAACTCTAAATTTCCGCAAAAAAAAAAGTTCGCTG
GGCTTTCTTTTTTAGTTGATGTTCGCTGGGCTTATATGTCACCGAAACGTCCTTACCTTTATTGGGCTGGGCCCAGGTTA
ACTCCACTGCCGATCCCTAATTCGCTCGGCTGAGCCCAAAGCCTGGCAGCCGGAGGCGAATCGATCGATCGGGCACGCCG
TCGCATTTCTTCCTTCCCTCCCCGCCCGCCCGGCCGCGCCGCCGTCCGTGCCGGCCGTAGCGTCTCGTCTCGCTCACAGG
CTGCGCACCACCGCTTCCCTCAAAGCTCGCTCCACCTCTCGCCGCCCAGCGCCGGCTCCTTCCTCGGCCGCTCGACGGCG
CCCGGCACTTCCACGGACCCGAGGCGAGCGGCGGGGCTCGTCAGATCGACGGGTGCGG---------CGCGGGGAAGGAG
ACCCTGCGCGTCTCCGCTATATTGCGGGCGGCCCCCCGTCCTATCCCCTGCG-CCGCTCCCCTCCATTGGCTGCCGCGCC
GCCAGCGAGCTCCAGGAGACCGGCGGACTGTGGGCAAGGTAGTCATCCGTCATCCCCTTCCCTCGTTCCCCTTCTTATCT
TCTGGAGAAGCGTCGACGCAACACCCAGGTGGAGAGAGCGACAAAATTTAGAGGAAATATACATGTTCCG-TTGTTGTTC
GTCACATCTCCTGCTAATAATATATGTACCATGGATGCTTGTTTCCTGTCCTTATGAAAAACAATTGTGAACCTGTA-GG
CTCTGTGCGCTGCAATGGCGTTTATGCGGCGGATGGCCGGCAGTCACATTTGCTCAGAGCTGTGCGGCTCGATCTTGAAT
CTGAGGATGTACTCTTCGAGGGTGGACTGGAAGCAGCTGCGGCCCATGATTCTGAAGAGGATCAAGAACCGAACAAAGGA
TTATCCTATCAAGCGAATGATCCCGGTGGCCCAGGAGGTGGTCAGGGCCAGAGAGATTCTCACTGAAGGCGTCTCAATAC
TTCTCAGAGCTGTCCCTGTACATTCATGCAAGTAAGGGCAAGAAGTATGAAATTATTAAGTTTTTTGTCGTAT-CATAGG
AGGATACAATACAGTAAACTTGGTCTTCTCGTTTGTTGCTGAAAGTTCCTTGTTTTGC-----ATCATTAT-CAGTTTAG
GTATTGCAAGAAGTCTGAAGAAATGGCAAAAC-AATTCAACAAAAATAAGTAC--TAGAAGATTGGTGTTCATAGGCTAG
TGTTATTGTTTCCGTA--CATTCATGCAACTAAGGGCAAGAAATATGAAATTGTTAAGTGTTTTCCACTTGATCATAGGA
GGATACAA--------TACAATAATAAACTTAGTCTTCTTGTTTGCTGTGGAAAGATCCTTATTTTGGCAGATCATCAGC
AAAGGTATTGCTAAGAAGTCTGAAGAAATGGACATATAAATAAACAGACATACGTAGAAGATTAGTGTTCCTAAACTAGT
---GTTGTTGTGTAATGTTGTTGCCAAGTTTGCCTTTTAGTCTGAGTGAATTCCAGTAACTCAAGCAGTCCCCTTTGATT
TTCACATTTGTTCTCATTTGTTGATCAGAGTGGACCTTTCTGCATTATTCATTCAGATGTTTTATGTGCTGTCATTTTAA
TTAGTGATTCATTTTTTGACTCATCCTGTAGATTTTGTCCTGAAATTCATGTTGGAGAAATGGCACATCAAATGAAAACT
TGCCACGGTTTCAAACGTATGGTCAAGGATCGACCTCACCAATGGGGCCCAGGCGGCTTGAATAACATCCTTGTCCCTGT
TGAGGCCTTCCATCAGGAACACATGTTTCAGGAGGAGATAAGGCATGACCAGAGGTTCGACTTCACTCGTGTCCCTGCTG
TACTCGAGCTATGTCATCAGGCAGGTGCAGAGCTACCTGAAGGACTCCTATACAGACGTGATGAGCTATGTACGGCAGCT
GAAGCTAACAACCAAAATCCTGCCCCTTTGCTATCTTCTGAACTTAGATTGGTAGGTCAAAGAACACTAGAAGCATGGGA
AAGGCTCAGATTAGGTGTGACAAAACTCCTATTGGTCTACCCATCCAAAGTGTGCGAGAATTGCTCTGAAGTGCATGTTG
GGATATCAGGGCATAAGGCCAGGATGTGTGGAGTATTTAAGTTTGAGGGCTGGCGGGGAAAACACAAGTGGAAGAAGGCT
GGAGTGGATGACCTGGTTCCTCAAAAGATTGTGTGGCATCAGCGGCCTCATGACCCACCAATTCTGGTGGACAGTGGGCG
AGATTATTATGGTCATGCTCCTGCTGTTGTGGAGCTTTGTGTGCAAGTAGGTGCAAGAGCATCACCAAAATATAATTGCA
TGATGAAGGAGCATGGCTTAGCACCACCTGTTCAAAGAGACCAGGCCACATAAGAAGTTCATTGCTTAGCTAGGTCTGTG
CATGATGACGATGTTATACGGTAGCTGTACATATCAGGTA----------ACAAGAGACC----------CTTTTGGATG
TGGAGCGAATCTAGGGTTGCTAAAATTGTACTTTCGCAGAATTCATGTGAATCAAATGAGGCAGGTAGCAATCCATTTTG
AAGGTTATCTGTGTTAGTGACGACAGTAGGTGAGAAGGAAAACACAGTTCATGTTTACCAATTAGCTGAATTTCCTCTGA
TGATATCAGGCAATTTCTTTCAGCGGGAGACTTAACTGCATTGTAAATTACCCAGAAGCCAAGAACGGAATATTTGGGGG
CCCTTAGTTTGTGCCGGCTCATTGAAAATCGAGGGATGGTAGCTCCGCCTTGCTACTGTAACATCAAGTGTTGTCATTAT
TTTTTTGCGGGAATTCTTTTTCCAAGGGGATTACTTGGGCAGTTTGTTCACATTACCTAGATGTCATACCATTACTCTTT
TCTGATAGCCCTATGGGCAATTTTGTTATAAGCAAGCTATGTAGAGGAAGCTCACTTGCTGCAAGTTGGTACTGTGTGTG
AACATCACAAATAACTTTTGTACTGCTTTCATAAGCACCCCTTTTTGAAGTGTGATCTGTACACACAACTTAGCTTGGCT
CCCGTTTTGTGTACTGATTATTCCAGCCACATGTACTGATTATTCCAGCCACATTGGCTGATAAGCTGGGTACAAATGAA
TTTCATGTACATTAAAGCTGAGGATGTATATGCTTTCCACATGTTTTTTTGTT---ATTATAATATATCTGTATCTGCTG
ACAAGTACTCCCTCTG--T--CAAAATGTAACATGTTTTTGAGTCTCAATCAAAACCAAAAAATGTCTTACATTTTGATA
AAG--GGAGTGCTTTGTACAGAGTGGACTCTGTTAGGGCATCTTCAATAATTTGTA-----TGTAATAAGTATGTAAACA
TGTTTTTCATTTGTCGTCTGTCATTATGGAAACATGTTTCTGCAATGGATGCTT
>chr2A_266
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------GTTGGGCTTACTCTGAATTTCCCACACAAAAAA---------
------------------AAGTTCGCTGGGCTTAGATGTCACCGAAACGTCCTTACCGTTATTGGGCTGGGCCCAGGTTA
ACTCCACTGCCGATCCCTAATTCGTTCGGCTGAGCCCAAAGCCTGGCAGCCGGAGGCGAATCGATCGATCGGGCACACCG
TCGCATTTCTTCCGTCCTCCCCCGCCCGCCCGGCCGCGCCGCCGTCCGTGCCGGCCGTAGCGTCTCGTCTCGCTCACAGG
CTGCGCGCCGCCGCCTCCCTCAAAGCTCGCTCCACCTCTCGCCGCCCAGCGCCGGCGCCTTCCTCGGCTGCTCGACGGCG
CCCGGCGCTTCCCCGGACCCGAGGCGAGCGGCGGGGCCTGTCAGATCGACGGGTGCGGCGCCGCCACCGAGGGGAAGGAG
ACCCTGTGCGTCTCCGCTCTATTGCGGGCGGCTCCCCATCCTATCCCCTGCGGCCGCTCCCCTCCATTGGCTGCCACGCT
GCCACCGAGCTCAAGGAGACCGGCGGACTGCGGGCAGGGTAATCATCCGTCATCCCCTTCCCTCGTTCCCCTTCTTATCT
TCTGGAGAAGCATCGACGCAACACTCAGGTGGAGAAAGCAACAAAATTTAGAGGAAATATACATGTCCCG-TTGTTGTTC
GTCACATCTCCTGCTAACAATATA----CCATGAATGCTTGTTTCCTGTCCTTATGAAAAACAATTGTGAATCTGTAGGG
CTCTGTGCGCTGCAATGGCGTTTATGGGGCGGATGGCGGGCAGTCGCATTTTCTCAGAGCTGTGCGGCTCGATCGTGAAT
CTGAGGATGTACTCCTCAAGGGTGGACTGGAAGCAGCTGCGGCCCATGATTCTAAAGAGGATCAAGAACCGTACAAAGGA
TTATCCTATCAAGCGAATGATCCCGGTAGCCCAGGAGGTGGTCAGGGCCAGAGAAATTCTCACGGAAGGCGTCTCAATAC
TTCTCAGAGCTGTCCCTGTACATTCATGCAAGTAAGGGCAAGAAGTATGAGATTATTAAGTTTTTTGTCTTAT-CATAGG
AGGATACAATACAATAAACTTGGTCTTCTCGTTTGTTGCTGAAAGTTCCTTGTTTTGC-----ATCATTATCCAGTTTAG
GTATTGCAAGAAGTCTGAAGAAATGGCAAAAC-AATTCAACAAAAATAAGTAC--TAGAAGATTGGTGTTCATAGGCTAG
TGTTATTGTTTCCGTATACATTCATGCAAGTAA--GCAAGAAATATGAAATTA-TAATTGTTTTCCACTTGATCATAGGA
GGATACAAGTATACAATACAATAATAAACTTCGTCTTCTTGTTTGTTGCTGAAAGATCCTTATTTTGGCAGATCATCAGC
AAAGGTATTGCTAAGAAGTCTGAATAAATGGACAGATAATTAAACAGACATACGTAGAAGATTAGTGTTCCTAAACTAGT
AT-------------TGTTGTTGCCAAGTTTGCCTTTTAGTCTGAGTGAATTCCAGTTACTCAAGCAGTCCTCTTTGATT
TTCACATTTGTTCTCATTTGTTGATCAGAGTGGACCTTTCTGCATTATTCATTCAGATGTTTTATGTGCTGTCATTTAAA
TTAGTGATTTATGTTTTGACTCATCCTGTAGGTTTTGTCCTGCAATTCATGTTGGAGCAATGGCACATCAGATGAAAACA
TGTCATGGTTTCAAACGTATGATCAAGGATCGACCTCACCAATGGGGCCCGGGCGGCTTGAATAACATCCTTGTCCCTGT
TGAGGCCTTCCATCAGGAAAACATGTTTCAGGATGAGATAAGGCATGACCAGAGGTTCGACTTCACTCGTGTCCCGGCTG
TACTCGAGCTATGTCATCAGGCAGGTGCAGAGCTACCTGAAGGACTCCTATACAGACGTGATGAGCTATGTACGGCAGCT
GAAGCTAACAACCAAAATCCTGCCCCTTTGCTATCTTCTGAACTTAGATTGGTAGGTCAAAGAACACTGGAAGCATGGGA
AAGGCTCAGATTAGGTGTGACAAAACTCCTATTGGTCTACCCATCCAAAGTGTGCGAGAATTGCTCTGAAGTGCATGTTG
GGATATCAGGGCATAAGGCCAGGATGTGTGGAGTATTTAAGTTTGAGGGCTGGCGGGGAAAACACAAGTGGAAGAAGGCT
GGAGTGGATGACCTGGTTCCTCAAAAGATTGTGTGGCATCAACGGCCTCATGACCCACCAATTCTGGTGGACAGTGGGCG
AGATTATTATGGTCATGCTCCTGCTGTTGTGGAGCTTTGTGTGCAAGTAGGTGCAAGAGCATCACCAAAATATAATTGCA
TGATGAAGGAGCATGGCTTAGCACCACCTGTTCAAAGAGACCAGGCCACATAAGAAGTTCATTGCTTAGCTAGGTCTGTG
CATGATGACGATGTTATACGGTAGCTGTACATATCAGGTA----------ACAAGAGACCACAAGAGGCCCTTTTGGATG
TGGAGCGAATCTAGGGTTACTAAAATTGTACTTTTGCAGAATTCATGTGAATCAAATGAGGCAGGTAGCAATCCATTTTG
AAGGTTATCTGTGTTAGTGAGGACAGTAGGTGAGAAGGAAAACACAGTTCATGTTTACCAATTAGCTGAATTTCCTCTGA
TGATATGAAGCAATTTCTTTCAGTGGGAGACTTAACTGCACTGTAAATTATCCAGAAGGCCAGAATGGAATATTTTGGGG
CCCTTAGTTTGTGCCGGCTCATTGAAAATCGAGGGATGGTAGCTCTGCCTTGCTACTGTAACATCAAGTGTTGTCATTAT
TTTTTTGCGGGAGTTCTTTTTCCAAGGGGATTACTGGA-CAGTTTGTTCACATTACCTAGATGTCATACCATTACTCTTT
TCTGATAGCCCTATGGGCAATTTTGTTATAAGCAAGCTATGTAGAGGGAGCTCACTTGCTGCAAGTTGGTACTGTGTGTG
AACATCACAAATAACTTTTGTACTGCTTTCATAAGCACCCCTTTTTGAAGTGTGATCTGTACACACAACATAACTCAGCC
CCCTTTTTGT----------------------GTACTGATTATTCCAGCCACATTGGCTGATAAGCTGGGTATAAATGAA
TTTCATGTACATTAAAGCTGAGTGTGTATATGCTTTCCACATGGTTTTTT-TTGTTATTGTAATATATCTGTATCTGCTG
ACAAGTACTCCCTCTG--TATCAAAATTTAAGACGTTTTTGAGTCTCAATCTAAACCAAAAACCGTCTTACATTTTGATA
AAG--GGAGTGCTTTGTACTGAGTGGACTTTGTTAGGGCATCTTCACTAATTTGTACTGTATGTAACAAGTATGTAAACA
TGTTTTTCATTTGTCGTCTGTCATTCTGGAAGCATGTTTCTGCAATGTATGTTT
>chr2D_1293
--------------------------------------------------------------------------------
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------------------------------------------------------ATTAAG-TTTTTGTCTTCAGCATAGG
AGGATACAATACAATAAACTTGGTCTTCTTGTTTGTTGCTGAAAGTTCCTTCTTTTGTAGTAGATCATTAT-CAATTTAG
ATATTGCAAGAAGTCTGAAGAAATGGCAAAAGAAAATAAACAAAAATAAG-----TAGAAGACTGGTGTTCATAGGCTAG
TGTTATTGTTGTGTAGC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TAATGGTGCTGCCATGTTTGCCTTTTAATCT--------------TACTCAAACAGTCCTCCTCGGTG
TTCACGTTTGTCCTCATTTGTTGATCAGAGTGGACCTTTCT-----ATTCATTCAATTGTTTTATGTGCTGTCATTTTAA
TTAGTGCTTTATGTTTTGACACGTGTTGAAGGTTTTGTCCCGAAATTCATGTTGGAGCAATGACACACCGGATGAAAACA
TGCTATGGTTTCAAACGTATGGTCAAGGATCAACCTCACCAATGGGGTCCCGACTGCTTGAATAACATCCTTGTCCCTGT
TGAGGCCTTCCATCAGGAAAACAAGTTTCAGGATGAGATAAGGCATGACCAGAGGTTTGACTTCACTCGTGTCCCAGCTG
TACTCGAGTTATGCCATTAGGCAGGTGCAGAGCTACCTGAAGGACTCCTGTACAGACGTGATGAGCTATGTACGGCAGCT
GAAGCTAACAACCAAAATCCTGCTCCTTTGCTATCTGATGAACTTAGATTGGTAGGTCAGACAAGACTGGAAACATGGGA
AAGGCTCAGATTAGGTGTGACAAAACTCCTACTGGTCTATCCATCCAAAGT-----------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>SNPs
SSSSSSS------------------------S-----S-S--------S----S------S-----S-------------
---------------S---S------------------S------S-------S--S--S--S--SSSSS-S--SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS---S-------S-S------------S-S----------------S--S--SS---
--------SSSSSSSSSSSSSSSSSSSSSS-----------------S-------------S------------------
-------------------------------------S-------------------S----------------------
-----S--------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-------------------------------------------S----------S-------------------------
----------------------------------S------------SS-------------------------------
-----------------------------------------S---S---S------------------------------
--------------------------------------------S------------------------------S----
-----------------------------------------S----------------S-----------S---------
----S-----------------SSSS------------S---------------------------S-------------
--S----S--------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-S---------------------------------------S--------------------------------------
----------------------------------------------------S---------------------------
-----------------------------------------------------SS-------------------------
-------------S------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-----------------------S-----------------------------------S--------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
----------------------------------------SSSSSSSSSS------------------------------
--------------------------------------------------------------------------------
----------------S-S--------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-----------------S---------------------------------------------------S----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-S-----------S--SS------------------------------S-------------------------------
---SS-------------------------------------------------------------------------S-
--------------S--S------------------------------------
>forward_288
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TTCGGAGTTCGTTGGGCTTT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------
>reverse_1282
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-CCTCAGAGCTGTCCCTGTAC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>forward_1276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TTCTCACTGAAGGCGTCTCG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------
>reverse_2414
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CAAGGCCAGGATGTGTGGAG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_1282
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ACTGAAGGCGTCTCGATAC
TC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>reverse_2660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GGCACCACCTGTTCAAAGAG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_2414
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CATGTTG
GGATATCAGGGCAC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_3350
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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