>input_sequence_46594
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ACATATAAGCGCACACACCCGGGACATC
AGATCATCAGATTCCCCAAAGAAGCCAAACCTAGCTAGCGCGCGCGAGACAAGATGGC------ACGCAGGTTCACCGGC
TCCGACGCCCTGACGGCGCTCACCCACCGCCTCGCCCACCAGTTGTCGGTCACCAGGGAGACCCCCAGCAACGTCGCCTT
CTCGCCGCTCTCTATCTACTCGGCTCTATCCCTGGTGGCCGCCGGGGCCCGCGGCGGCACCCTGGACGAGCTCCTCGCCG
TCCTCGGCGCGAGCTCCCGCGACGAACTCGCCGCGAACGGCCGCTTCGTGGCGGAGCACGCGCTCGCCGACCGGTCGCCG
TCGGGCGGGCCACGCGTCGCGTTCGCCTCCGGCGTGTGGCACGACGCGGGGCGGGCGCTGGAGCCGGCCTACAGGGAGGC
CGTCGTCGCGTCCTACTTGGCCGAGATACGCGCCGTCGACTTCCGCAACAAGGTCAGTGTCTATGTCGTCAGGTCATATG
TACTACTCTCTTCGTTCCAAAATATAAGTCTTTGTAGAGATTTCAGATGAACTATCACATACGGATGTATATAGACATAT
TTTAAAGTGTAGATTTACTCATTTTGCTTCGTATGTAGTTATTTGTTGAAATCTCTAGAAAGATCTATATTTAAAAACGG
AGGGAGTATAGTGCATGCATGAATCCGTCCAATGGAGATTGATTGGTTGCTGTCGATCGGTGCAGGCGGAGGAATCGAGG
GAAGAGATCAACAAGTGGGTCGCGGCGGCCACGGGCAAGCTCATCGACTCGATCCTCCCCGCGGAGTCGGTGGACGAGGA
CACGGCCGTGGTGCTCGCCAGCGCCATCTACTTCAAGGGCAAGTGGGAGACGCCCTTCAGGAAGAAGCGCACCAAGGTGG
AGCGGTTCTACCTCCTGGACGGGACCGCCGTCGACGCGCCCATGATGCGCACCGGCCGGAGCCAGTACATCGACGAGCAC
GACGGCTTCAAGGTGCTCCGGCTGCCGTACAGGTCCCAGGACCCCGGCGCCTCCAAGAAGCGGCGACGC-----------
-GGCACCTCGTCCGGCGACGATCCTGCCCCACCACTACCGCGCTACTCCATGTGCGTCTTCCTGCCGGACGCGCGCGACG
GCCTGTGGGACCTCGTCGGCAAGATCGCGTCCAGCCCGAGCTTCCTGCGCGACCACCTTCCGGAATACGAGGTCGATGTC
GACGAGTTCCGCCTGCCCAAGTTCAAGGTCTCCTTCTACGGGAAGCTGTCCGGTGTGCTTGGGGATATGGGACTCGTGGC
CGCGTTCAAGGCCGACAAGGCTGACCTGACTGGCATGGCGCCCGACGTCGAGGATGCCTCTGGCGAC---ATAAAGCGGC
TGGTGCTCAAGAACGTTTTCCACAGGGCGGTGGTCGAGGTGAACGAGGAAGGCACCGAGGCGGCCGCAGTAACCGTCTGT
GAGGAGGAAGATGAATCGGCCTGTCAGCCCGTTGATTTCGTCGCCGACCATCCGTTTGCCTTCTTTGTGATCGAGGAGGT
GTCCGGTGCCGTCGTCTTCGCCGGCCATGTGCTTGATCCGACAAAACACCAAGACACATTACACGACGTGGATTAATTAG
AAACTCGACTATATTTTGTATCTCCA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr5D_1_TraesCS5D01G312500
CAGGAGCATTCAAACGATCATCCTCGATCAAGTACTCCACATATGCACATCCTTTCTAAAATTAAACTCTCAAATGAAG-
-GT-AGGGAGGTGAGGCCAGCATATAGAGCATAAGGGCATCTTTAGTACGGACCCATAAACTGCCTGCATCCGTCTGGAC
GAAGCAGTTCCCACGTGATTCACCATCCAATAACTACTCTGATTACATCAAAAAATGCAGGCATCGAGCTAGGAACTTCT
TTGAACGACGGAAAATAGTTTAGGTCCACTATGCCATGGTCTCTGCTACCCTCTTGAACCTGCATATCGAACGTTCGGTT
TTACATTTCTGAAGTAGAACACA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CGCCATGAAAAGATA
ATTGCGACCAAGTGTTCTAGACTTCGAGTGGGACGAAATGTTCGTTAGGAAGATTATTACTCCCTCAATTCCTTTATATA
AGGTGGATTTTTTTTTGATAAAATTTCATGATGCAAGGTGCATTTCTTCTAATTCCTTGCTGTTTCAGTTTTAGCCCTCT
AAAAAAAGAA----------AAGTATTTCTCCCTTGATTGCATGTATCTCTCCATGTAGAGAAAAAACGAAAAGTATCTC
TCCTGATTGCGTGTATC-----TCTTTTTTTTCCTGGCCTAAATAATTTACTTGCCTCTAATCAACGAATTATCTAAGGA
TAATTTGGTCCTAAATTGTCTAGGATTATGTGCCTTGGTCACCGTGCTGAAAATACACCTTTATGGAGGGAGGTAGGGGA
ATAGATTAAGACATATTTTGCCCGCCATAGAGAAAAAGAAGAATACTGGACTTATTTATGGGAGGCAATCTGAAGTCTGA
ACATAGATACGT-ATGCTGTATGCACTGTTCCATGAGTAGCAGGATCTGATCTT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CCCTTTATTTCCTCTTTGAGTTATCAACCAATCGGTATTACTAACGGTAACGGGGGAGAGACACAAATCTATACG
TTTGGTTACTCCGATCGTCGCACGTATAAAGTGTTCAAGTCTTCAAGGTCATACATATAAGCGCACACACCCGGGACATC
AGATCATCAGATTCCCCAAAGAAGCCAAACCTAGCTAGCGCGCGCGAGACAAGATGGC------ACGCAGGTTCACCGGC
TCCGACGCCCTGACGGCGCTCACCCACCGCCTCGCCCACCAGTTGTCGGTCACCAGGGAGACCCCCAGCAACGTCGCCTT
CTCGCCGCTCTCTATCTACTCGGCTCTATCCCTGGTGGCCGCCGGGGCCCGCGGCGGCACCCTGGACGAGCTCCTCGCCG
TCCTCGGCGCGAGCTCCCGCGACGAACTCGCCGCGAACGGCCGCTTCGTGGCGGAGCACGCGCTCGCCGACCGGTCGCCG
TCGGGCGGGCCACGCGTCGCGTTCGCCTCCGGCGTGTGGCACGACGCGGGGCGGGCGCTGGAGCCGGCCTACAGGGAGGC
CGTCGTCGCGTCCTACTTGGCCGAGATACGCGCCGTCGACTTCCGCAACAAGGTCAGTGTCTATGTCGTCAGGTCATATG
TACTACTCTCTTCGTTCCAAAATATAAGTCTTTGTAGAGATTTCAGATGAACTATCACATACGGATGTATATAGACATAT
TTTAAAGTGTAGATTTACTCATTTTGCTTCGTATGTAGTTATTTGTTGAAATCTCTAGAAAGATCTATATTTAAAAACGG
AGGGAGTATAGTGCATGCATGAATCCGTCCAATGGAGATTGATTGGTTGCTGTCGATCGGTGCAGGCGGAGGAATCGAGG
GAAGAGATCAACAAGTGGGTCGCGGCGGCCACGGGCAAGCTCATCGACTCGATCCTCCCCGCGGAGTCGGTGGACGAGGA
CACGGCCGTGGTGCTCGCCAGCGCCATCTACTTCAAGGGCAAGTGGGAGACGCCCTTCAGGAAGAAGCGCACCAAGGTGG
AGCGGTTCTACCTCCTGGACGGGACCGCCGTCGACGCGCCCATGATGCGCACCGGCCGGAGCCAGTACATCGACGAGCAC
GACGGCTTCAAGGTGCTCCGGCTGCCGTACAGGTCCCAGGACCCCGGCGCCTCCAAGAAGCGGCGACGC-----------
-GGCACCTCGTCCGGCGACGATCCTGCCCCACCACTACCGCGCTACTCCATGTGCGTCTTCCTGCCGGACGCGCGCGACG
GCCTGTGGGACCTCGTCGGCAAGATCGCGTCCAGCCCGAGCTTCCTGCGCGACCACCTTCCGGAATACGAGGTCGATGTC
GACGAGTTCCGCCTGCCCAAGTTCAAGGTCTCCTTCTACGGGAAGCTGTCCGGTGTGCTTGGGGATATGGGACTCGTGGC
CGCGTTCAAGGCCGACAAGGCTGACCTGACTGGCATGGCGCCCGACGTCGAGGATGCCTCTGGCGAC---ATAAAGCGGC
TGGTGCTCAAGAACGTTTTCCACAGGGCGGTGGTCGAGGTGAACGAGGAAGGCACCGAGGCGGCCGCAGTAACCGTCTGT
GAGGAGGAAGATGAATCGGCCTGTCAGCCCGTTGATTTCGTCGCCGACCATCCGTTTGCCTTCTTTGTGATCGAGGAGGT
GTCCGGTGCCGTCGTCTTCGCCGGCCATGTGCTTGATCCGACAAAACACCAAGACACATTACACGACGTGGATTAATTAG
AAACTCGACTATATTTTGTATCTCCAACAAATAGCCACCCGCCAACTAATGACTCGAACTTGTGAATTATTATTTTTATT
TTTATTTTGGGGAGACTGGGAGTTTAAACTGGATTGGCTATTCAAAGAGAGAAATGAGTAGGTGAATATGGACTAGGGAG
TGCCTACGTTCACAATTTCTTGAAGCTCGATCTCCCCCAGATGACTCATTTAGATGAGATATAATTTGGTCTCATTCACC
TAACAAAAACATATACAACCCACGTCAGTACACACATCTTATAGCGTCACATTCAATGGCTATAAAAGGTGAATGAGACC
AAACTATATCTCATCTAGATGAGTTCTATCAAAACTGTATGGACTATTACTATTCATTGCTTCGAAC-CCGATTTTTATT
CGACGAATAGGAATCACTCAAGGCCAAATCGAATGGCTAGAATTGCATCAAGCTTGAGATCGAACGGCCCAAAGTCACTG
AGATCTGAGAGGATATCATATGAGCATGGGTGACTTAGAGTGTCTGTTACGCACCAAGTCGTGTTAAAGGTGGACACAAT
TTCTTTTAATACAATATATT--ATCGAAGTCGCACACATACACGAGCATATATACACCCA------T-------AGGCTA
TAATCACACACATGCATACCCTACCCCCAATTGAGCACCTCCGAGAGAATGACCGGCACATCATCTTAAGATGAGTAAAT
AGCATAAAACTACCACTTTTCGTCCTATGGTTCCAAAAAACCACCACTTTTTTGTTTGTGACTGATAGCTACCACTTTTT
TCGTCGGTTGTCTCAAAAAACCCAAATCGCCCGTTGCTAGCGTTTTAAACCGTTTTCTGACGGTCCGGGCCCGCCTGTCA
GGCCACGTCAGCGCCGCGCGTGACGGCGAGGCCGTTAACGGCCGTTATTCGGACCGACCGGTGCGGTCGGACCGCACCCG
CTCGCTCGCTGCCGTTCTCTCTCTGTCGGCAGCATCTCTCTCTCTCGCTCCTCCTTCCCCCCGTGCTCTCTGTCTCCCCC
GA
>chr5B_1
CAGGAGCATTCAAACGATCATCCTTGATCATGTACTCCACATAAGCACATTCTTTCTAAAATTGAACTCCCACAAATGAA
TGT-AGGGAGGTGAGGCCAGCGTGTAGAGCATAAGGGCATCTCCAATATGGGCCCCTAAACCGCCTGCACCCGTCTGGAC
CAAGCGGTTTGGACGTGATTCGCCATCCAATAACTACTCTGATTACATCAAAGAATGCAGG--------------CTTCT
TTGAACGACGGAAGACGGTTTAGGTCCACTATGCCATGGTCTCCGCTACCCTCTTGAACCTGCGTATCACACGTTTTTTC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGATA
CATGCAACCAAGCGAGAGATACTTTTCTTTTTCTAGAGGGCTAAAACTGAAACTGCGAGGAATTAGAAGAAATGCATCTT
ACATTT------------TAAAATTTCATTAAAAAAATCCACCTTATATAAAGGAATTGAGGGAGTAATAATCTTCCTAA
CGAACATTTGGTCCCACTTGAAGTCTAGAACACTTGGTCGCAATTATCTTTTCATGGCGCGTGTTCTACTTCAGAAATGT
AAAACCCAACGTGTGATATATATCTTTTTTTCCCTAGCATAAACAATTTACTTGCCTCTAATCAACGAA-----------
---------CCTAAAATGTCTAGGATTATGTGACTTGGTCACTGTGCCGAAAATACACCT------AGGGAGGGAGGGGA
ATAGATTAAGACATATTTTGCCCGCCATAGAGAAAAAGAAGAATATTGGACTTGTTTATGGGAGGCAA-------TCTGA
ACATAGATACGT-ATGCTGTATGCACTGTTCCATGAGTTGCAGGATCTGATCTT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CCCTCTATTTCCTCTTTGAGCTATGAACCAATCGGTATTACTAACGTGG--------GAGAGACAAATCTATACG
TTTGGTTACTCCGATCGTCGCACGTATAAAGTGTTCCAT-----------ATATATATAAGCGCACACACCCGGGACATC
AGATCATCAGATTCACCAAAGAAAACAAACCTAGCTAGGGCC----AGACAAGATGGC------ACGCGGGTTCACCGGC
TCCGACGCCCTGACGGCGCTCACCCACCGCCTCGCCGACCAGTTGTCGGTCACCAGGGAAACCCCCAGCAACGTCGCCTT
CTCGCCGCTCACTATCTACTCGGCCCTATCCCTGGTGGCCGCCGGGGCCCGGGGCAGCACCCTGGACGAGCTCCTCGCCG
TCCTCGGCGCGAGCTCCCGCGACGAACTCGCCGCGAACGGCCGCTTCGTGGCGGAGCGCGCGCTCGCCGACCGCTCGCCA
TCAGGTGGGCCACGCGTCGTGTTCGCCTCCGGCGTGTGGCACGACGCGGGGCGGCCGCTGGAGCCGGCCTACAGGGAGGC
CGTCGCCGCGTCCTACTTGGCCGAGATACGCGCCGTCGACTTCCGCAACAAGGTC-------------------------
--------------------------------------------------------------------------------
------------------------------------AGTTATATATATATATATATATATATATATATATATATATATAT
A-----TATAGTGCACGCATGAATCCATCCAATGGAAATTGATCGATTGCTG----TCGGTGCAGGCGGACGAGTCGAGG
GAAGAGATCAACAAGTGGGTCGCGGCGGCCACGGGCAACCTCATCGACTCGATCCTCCCCGCTGAGTCGGTGGGCGAGGA
CACGGCCGTGGTGCTCGCCAACGCCATCTACTTCAAGGGCAAGTGGGAGACGCCATTCAAGAAGAAGAAGACCAAGGTGG
AGCGGTTCTACCTCCTGGACGGGACCGCCGTGGATGCGCCCATGATGCGCACCGGGCGGAGCCAGTACATCGACGAGCAC
GACGGCTTCAAGGTGCTCCGGCTGCCGTACAGGTCCAAGGACCCCGGCGCCTCCAAGAAGCGGCGACGC-----------
-GGCACCTCGTCCGGCGACGATCCTGCCCCGCCACTACCGCGCTACTCCATGTGCGTCTTCCTGCCGGACGCGCGCGACG
GCCTGTGGGACCTCGTCGGCAAGATCGCGTCCAGCCCGAGCTTCCTGCGCGACCACCTGCCGGAATACGAGGTCGATGTC
GACGAGTTCCGCCTGCCCAAGTTCAAGGTCTCCTTCTACGGCAAGCTGTCCGGGGTGCTTGGGGATATGGGACTCGTGGC
CACGTTCAAGGCCGACAAGGCTGACCTGACTGGCATGGCGCCCGACGTCGAGGATACCTCTGGGGAC---ATAAAGCGGC
TGGTGCTCAAGGACGTTTTCCAGAGGGCGGTGGTCGAGGTGAACGAGGAAGGCACGGAGGCGGCGGCAGTAACCGTCTGT
GAGGAGGAAGATGAATCGGCCTGTCAGCCGGTGGATTTCATCGCCGACCATCCGTTTGCCTTCTTTGTGATCGAGGAGGT
GTCCGGTGCCGTCGTCTTCGCCGGCCATGTGCTTGATCCTACAAAACACCAAGACACATTACACGACGTGGATTA----G
AAACTCGACTATATTTTGTATCTCCAA----TAGCCACCCGCCAACTAATGACTCAAGCTTGTGAATTTTTATTTTGCCG
A-----------AGACTGGGAGTTTAAACTGGATTGACTATTCAAAGAGAGAAATGAGTAGGGGAAT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ATGGACTATTACTATTCATTGCTTCGAAC-CCGATTTTTATC
CGACGAACAGGAATCACTCGAGGCCAAATCAAACGGCTAGAATCGCATCAAGCTCGAAATCGAACGGC------------
-----------------------------------TAGAGTGTCCGTTGCGCACCCAGTCGTGTCAAAGGTGGACACAAT
TTTTTTTAATACAATATATACCGTCAAAGTCGCTCACATACACGAGCATATATATACACCCATTCCT-------AGGCTA
TAATCACACACACACATACCCTACCCCCAATTGAGCACCTCCGAGAGAATGACCGGCACATCATCTTAAGAT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr5A_2
-AGGAGCACTCAAAC-ATCATCCTCGATCAAGTACTCCACATATGCATATCTTTTCTAAAATCAAACTCCCACGGATGAA
ACGCAGGGAGGTGAGGCCAGCGTGTAGAACATAAGGGCATCTTCAACGTGGACCTCTAAATCGCACGCACCCGTCCGGAC
CAAGCGGAACAAACGTGATTCGCGACCCAAAAACTACTTTGATTACATCAAAGATTGCAGGCATCGAGCTAGGAACTTCT
TTG-ACAACGGAAGACACTTTAGGTCCACTATGACATGGTCTTCGCCACCCTCTTGAACCTGCATATCGAACGTTGGGTT
TTACATTTCTAAAGTAGAACACACGCCACACAAAGCAAGCAGTACGCAACCGCCTTCTCCCCTAAGAAAAGCCTAGGATT
CCTTTGCATCCCGCCGGGCACCGCCGCCGGTCCGCGTCGTATCCGGTGACCTTAGGGCCATTGCGGCGCGGTGGATCCCG
GCCCTTGCCGGCGGGAGGGCTTTGTTATTTTCAGATGTTTCCTCCAGTTTCGTTAAGCTTTGTTTCCTATTCAAAAAGAC
GAGATGGTGGCGGTTTCCTAAAGATGGAATAAGGTTCGCCCCGCCTAGCCTCCGTCTTGGTGGTGTGTCGATCTAGCATC
GTCGGTGGGCATGTGGATGCGTGTCTCCGACGAATCTGTCCTTAGTGGTTTGCTCGGATCTGGCCGTAGTTCGTCTACGT
TCGTGTGTCTTTAGGTTAGATCCTTCCGATCTACGCTACTCTTCATCGGCAGTGATTGTTGTTCTGCTACGCTGGCCCTA
TGGGGTCTTAGCACGACAACTTCTCAACTGTCTATTACAACAAGTTTTGCACGGCTCCGGTGAGGGAGGGGCGATGACAG
CGGCGCGCCTTCGGCACACTTCGGTGCTTGTAGTCATGGCTACGTGGTCTATGGATCTGGATGTAATTTTTATTATTTTT
GACGTTCGTTACTGCCATGATTGAAGATGAATATACTGACTTTTTCTCGGAAAAAATAGAGCACGCGCCATGAAAAGCTA
ATTGCGACCAAGTGTTCTAGATCTTGAGTGGGACAAAATGTTCAGTAGGCCGCTAATTAGAAAAAGAAGAATGTTGAATG
GGAAATACATGAAGGCATATTTTGCCTGCTAAT----------------------------------------------T
AGAAAAAGAA----------GAATATTTGACTCCTTTTCTTTTCC-----------------------------------
-----------------------------------AGCCTAAATAATTTAATTGCCGCTAATCAACAAATTATTCAAGGG
TAATATCATCCTAAATTGTCTAAGATTATGCGCCTTGATCATCATGCC----------CTTTATGGAGGGAAGGAGGGAA
ATAGATTAAGACATATTTTGCCCGCCATAGAGAAAAGGAAGAATATTGGACTTGTTTATGGGAGGCAA-------GCTGA
ACATAGATACGTAATGCGGTATGCACTGGTCCATGAGAAGCAGGGTCTGATCTGAGTGTGGATTTTTGGAGGCCGAGCTC
CAGTGAGCTCGGTATTTAAAAAAAACATATTCAAAAGTTTCAAAAAAATCTAAAAAAAAATACCATGAAAACTTATATGT
ATTCTGCAAGAAGGTGTTAATTTTGTCGAAAAATGTTGTGATTTGTAGGCTGTACAAAAATAACAAATTTCTGGCCCGAT
AACAAAAATAACAAATTTCTGGCCCGATAACAAAAATAAAAGGCCCATTAAAAATGCATATTTGTCTTTTTCCTGTACTC
CACATGTAAATGTATAATACTGTGAAATTTTGCATATACATAGTATACATGTGCATGTGTGTTCAAAAAATAAATTTAGA
ATTTTTCACGCTCCAAAAAAATAAAAATTGAAAACGAGCTCACTGGAGCTCGGCCTCCGTTGGCATTTTTCCGGGTCTGA
TCTTCCCTTTTATTTCCTCTTTGAGTTATCAACCAATGGTATTAC-------TAACGGGGAAGAGACACAAATCTATACG
TCTGGTTGCTCCGATCGTTGCACGTATAAAGTGTTCAAGTCCTCAAGGCCATATATATAAGCGCACAAACCCGGGACATC
AGAT--------TCACCAAAGAAGCCAAACCTAGCAAGGGCC----AGACAAGATGGCACGCGGACGCGGGTTCACGGGC
TCCGACGCGCTGACGGCGCTCACCCACCGCCTCGCCGACCAGTTGTCGGTCACCAGGGAAAACCCCAGCAACGTCGCCTT
CTCGCCGCTCTCTATCTACTCGGCTCTATCCCTGGTGGCCGCCGGGGCCCGCGGCGGCACCCTGGACGAGCTCCTCGCCG
TCCTCGGCGCGAGCTCCCGCGACGAACTCGCCGCGAACGGCCGCTTCGTGGTGGAGCACGCGCTCGCCGACCGGTCGCCG
TCGGGTGGGCCACGCGTCGCGTTCGCGTCCGGCGTGTGGCACGACGCGGGGCGGGCGCTGGAGCCGGCCTACAGGGAGGC
CGTCGTCGCCTCCTACTTGGCCGAGATACGCGCCGTCGACTTCCGCAACAAGGTTAGTGTCTATGTCTCATCACGTC---
--------------------------------------------------------------------------------
------------------------------------------------------------------------ATATATAC
G-----TAGTTTGTATCCATGAATCCATCCA-TGGAGATTGACTGATTGCTGTCGATCGGTGCAGGCGGAGGAGTCGAGG
GAAGAGATCAACAAGTGGGTCGCGGCGGCCACGGGCAAGCTCATCGACTCGATCCTCCCCCCGGAGTCGGTGAGCGAGGA
CACGGCTGTGGTGCTCGCCAACGCCATCTACTTCAAGGGCAAGTGGGAGACGCCATTCAAGAAGAAGAACACCAAGGTGG
AGCGGTTCTACCTCCTGGACGGGACCGCCGTCGACGCGCCCATGATGCGCACCGGGCGGAGCCAGTACGTCGAGGAGCAC
GACGGCTTCAAGGTGCTCCGGCTGCCGTACGGGTCCCAGGACCCCGGCGCCTCCAAGAAGCGGCCACGCTCACGCCAAAG
CGGCACCTCATCCAGAGACAATCCTG---CACCACTGCCGCGGTACTCGATGTGCGTCTTCCTGCCGGACGCGCGCGACG
GCCTGTGGGACCTCGTCGGCAAGATCGCGTCCAGCCCGAGCTTCCTGCGCGACCACCTGCCGGAATATGAGGTCGATGTC
GACGAGTTCCGCCTGCCCAAGTTCAAGGTCTCCTTCTACGGCAAGCTGTCCTGTGTGCTTCGGGACATGGGACTCGTGGC
CGCGTTCAAGGCCGACAAGGCTGACCTGACTGACATGGCGCCCGACGTCGAGGATGCCTCGGGGGAGCTAATAAAGCGGC
TGGTGCTCAAGGACGTTTTCCACAGGGCGGTGGTCGAGGTGAACGAGGAAGGCACCGAGGCGGCCGCCGTCACCGTCTGT
GAGGAGGAAGATGAATCGGCCTGTCAGCCTGTCGATTTCATCGCCGACCATCCGTTTGCCTTCTTTGTGATCGAGGAGGT
GTCCGGTGCCGTCGTCTTCGCCGGCCATGTGCTTGATCCTACAAAACACCAAGACACATTACACGACGTGGATTA----G
AAACTCGACTATATTTTGTATCTCCAA----TAGCCACCCGCCAACTAATGACTCGAGCTTGTGAATTTTTATTTTTATT
TTTATTTTGCGAAGATTGGGAGTTTAAACTGGATTCTCTATTCAAAGAGAGAAATGAGTAGGCTAAT-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TTGGACTATTACTATTCATTGCTCCGAACCCCGATTTTTATC
CGACGAGCAGAAATCACTCGAGACCAAATCAAATGGCTAGAATCGCATCAAGCTCGAGATCGAACGGCCCAAAGTCTCTG
AGACATGAGAGGATATCATATGAGCATGATA-ACTTAGAGTGTCTGTTGCGCACCCAGTCGTGTCAAAGGTGGACACAAT
TTCTTTTAATACAGTATATACCATCGAAGTCGCTCACATACACGAGCATATATACACTCA------TCCCTATAAGGCTA
TAATCAAATACACACATACACTACCTTCAATTGAGCACCTCTAAGAGAATGACCAGCACAACAGCTTAAGATTGATAAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>SNPs
---------------------------------------------------------------------S--S-SSSSS-
---------------------S-S-------------------S-S--S------S-----S-------S----------
S----S----SS---------S------------------------------S---------------------------
-------------S-S---------------------------S-------------------------------S----
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S---------S--------SS-------S-S----SSSSSSS--SSSS-------S
--S-SS-SS-SSSSSSSS-----------S-SSS--SSSSSSS--S-SSS--SSSS---SS-SSSS-S-SS-SSS---S-
-S--------------------------SS-S----S-S----S-----S-S----SS-S-SSSSSSSSSSS--S-SSSS
SSSSSSSSS-----SSS--------------S---S-------------------------------------SS----S
----S-SS---------------------------------------S-------------------------S------
---------------------------------------------S-------S--------------SSSSSSS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S--------S-------------------
-----------------------------------------S------S----S--------------------------
--------------S-----------------------S--SSSSS----------------------S-----------
------------------------------------S----------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------------------------------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-S-SS-S--S-S--S-S-S--S-----S--S-S-SSS
-SSSSS--------------------S------------------S---------------------------S------
-------------------------------------------------------------------------S------
--------------------S---------------------------------S----S-------SS-----------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-----------------------------------------S--------------------------------------
---------------------------------------------------------------S----------------
-----------S--------------------------------------------------------------------
-----------------------------S--S------S----------------------------------------
---------------------------------------S-----------------------------------SSSS-
---------------------------SSSS--------------------------S----------S-----------
---------S-S------------------------S-------------------------S----SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------S
-------S-----------S----------S------------S----------S---------------------S---
---SS-----------------------SSSS----------------S------S--------S---------------
-------------------S-------------S-----------------------S----------------------
------------SS----------------------------------------------------------SSS----S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_182
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AGCAGTTCCCACGTGATTCA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_2134
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CATATAAGCGCACACACCCG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_1075
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TCTAGACTTCGAGTGGGACG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_3339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TCCGGAATACGAGGTCGATG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_2300
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTTGTCGGTCACCAGGGAG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_3916
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GGGAG
TGCCTACGTTCACAA-----------------------------------------------------------------
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--
