>input_sequence_46570
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------CCATAAATTCT
TTCCGTCCGCCTCGTG------TTGCTTCCCGACCAAGTCTGCAGCTTCCTCTCCTCGCCAGCAAGAGCGCGGATTCCAT
TCCATCCGGATTTCCTTCTCGATCGCACTCACAGCCTAGCCTAATAGCCGATCAAACAAACCCGGCCTTCCGTAGCCCGC
CCGAGACCCCAAGTCACGCACAAATTTTCTTCATCTTCTCCCGCAATGGCGGAGCCTGCTCCTGCTCCGGCGCAGCCAAG
AACCGGCGGTGACGATGTCATTTCTGCCAGGATGCAGCGGGCTCTGGAGCTCTTGTTCCCGTCTAATCTCGCCGGGAAGG
CGGTGCTGTTCGCCGTCGTGGTGGCGCTGCTGCGGATGCTGCCGACGAGCCAGACCCCCGGGATCTGGGACCTGCCGCAC
ATCCTCCTGCTCGGCCTCGTCATCTCCTACGGCGTCTTCGGCCAGAGGAACGCCGACGCCGATGTGGTGGTGCCCCCGGT
GGCCGCTTCTTCCAAGGTCACCGACGACGACGAGTCCGTGGAGGCCTTCGTCTCCCAGATACTGCAAGGGCCGCTGGTCT
TCGAGGGGAACAGCGGCGACGGA---------GGCAGCGGCGGCGCCAGGGACGGCGCCGTGCAGGCGTGGAGCTCGCAG
TACTACCCCGACGATGCCCTCGTCGTCGTCGCCGACACGGGCGACGCTGGCGAGAAGCCGATTCTCCTGCCGGTGAGGAA
GCTCAAGCCATTGGCCGAAGAATCTGCACCGGGCAATGTAAGTGATGACGCTACCGATGAAGAAGCAGAGTTCCTCCCCA
AGGAAGAAATAGGATACGGCAGCGCGCGCGAAAAAGCCATGTCGTCGCCGTCCTCCGTCCTCGAAGCCGGCTTGACCCTC
TCGCCGTCCTCGCCTCCTCCCCCGCCGCCTCCACCGCAGTTTCGTGGCGGCGCGCGTGGCCTCGGGAAGGCGAGAGCAAG
AAGCTTCAACGAATATGGGGTTGGAGACATGAGCATGAGCGGACGGACGGGTTTACGGAGCAGGTTCCGGTCAAACTCTT
CCATCCAAGCAACGAGGAGGAGCACTTTCACCGACTACGATCCTGTGGCTCCGTCCGACGATCAAGCGGCCGCAGACGAT
GAGGCTGACGAGATGGCCGCGGCCTCGGACAGCTCGTTCAGC---GACGACATGGCCAGGGACGGCGACGATGAACACGA
CGAGGAGGAAGACAACTACGACGAAGAGGGAGAC------GAGGAGGGGCGGCAAGGTGACAACTCCTGCGACGAAGAGC
TTTTCGAGCTGGCGACGAGGCCCGAGCCGGAGGAGGACGAGGTGGACAAGAAGGCTGACGAGTTCATAGCCAAGTTCAGG
GAGCAGATTAGGATGCAGCGGGCTCATCCGGGGCCGGGCAGAAGATGAGCCATCTCATGTGTAATGCACCGCATTTTAAT
GTTTTTTTT-CTTCTTTTGATTGCTCTCATGTAACTACAACCTGAACAAATGGTGTCAATCAGTGGAATAAGTGTGCGCG
GGATATTGTGCGCATCCTCTTTTTCTCACATTTTGTTTGATAAAGCACGTTTTATTGACTCTTAGACAAGAGTAATGCTG
CACATACATAGATTTACCGGACTTAG----GCAGTTGGGTTTTGATCGGAGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr2D_1_TraesCS2D01G413000
AGAAGATGGGGAGCGGTGGACTTGGTGATGCGATTCTTGCCCAGCGTCTAGCCTCCTTTAAATAGAGGGTGCACGGGAGG
AGCTTTGCCCTGCATTGTGTTTAATGTCGGCCCAC-TCGTGAATGGACATGTGACCGGAGTAGGTTTGTCGTCTTCCACA
CCGGTTTAATGGAGGCATTTGAATGCGGCGAGGAGGCATGTTCTGCCGGCGTGCAGCGGGCGACGCCCTCGACTGGTGCG
CCGTTTTAATGGTCGAGGCAGTGAGACGTCGCGTCCGTTCTAAGCCGTCTTCAATATGGAGGGGCACGCTCTACAGCAAC
AAGAATGCGGGCAGCTGGCGCCAGGCGGGAACGCGTGCGGGCGATGGAGGAGTGGTTCGGGTGGGCCACGGCGGACGGGT
------GTGGGTAGTGTCGGAATGCCCGCAAAGCCCATA-TTTGTCTTCGGTTTACGGGAGAAACAACGTCCAAATCAAA
CAGCGA--------AGGTCCGCGTTGGATGGGGTTCCGTGATCCGAACGTATGCGGATGATTTAAAGGTAAGGTGTCGAA
GATGCCCTAGCATAGCACGCTCTCTTTTCTGGAGCGTGCCTGAAGCTAGCGACTGAACAACCCAGAAGTGGACTTCTACG
TCCTTTCAGCCCCAGCTCGGCTCCAAAGTCCAAGCTTCCAAAACAGAGGAGCTCATGAGCAAACGCGGCGCGTAGCCTAG
AACCGTCCACATGACGAGACCTGCAAATCTCATCCGGTAGGAGAGCCATGGACCATATCCGGCCTGGGGCTTGGGCGGCG
ACGGCGTTTGGCAAAGCGCCAAACGCTACGGTTGCGCCGGCCCGGACC------------ACCGCCCGCCGCCCCCCCAG
AGGATTACCACGCACACGAGTCCTTTTCGATCGCCGAATGATTT-TGATCTAGCACGTTCCCGCGGTTTCCCTCCACAGT
TGAACGTTGCCCTCGCCAGGATTAATACTAATCCCGTCCATTCTCTTTGGGGTTGCTTTGCCTTTGCTCCCATAAATTCT
TTCCGTCCGCCTCGTG------TTGCTTCCCGACCAAGTCTGCAGCTTCCTCTCCTCGCCAGCAAGAGCGCGGATTCCAT
TCCATCCGGATTTCCTTCTCGATCGCACTCACAGCCTAGCCTAATAGCCGATCAAACAAACCCGGCCTTCCGTAGCCCGC
CCGAGACCCCAAGTCACGCACAAATTTTCTTCATCTTCTCCCGCAATGGCGGAGCCTGCTCCTGCTCCGGCGCAGCCAAG
AACCGGCGGTGACGATGTCATTTCTGCCAGGATGCAGCGGGCTCTGGAGCTCTTGTTCCCGTCTAATCTCGCCGGGAAGG
CGGTGCTGTTCGCCGTCGTGGTGGCGCTGCTGCGGATGCTGCCGACGAGCCAGACCCCCGGGATCTGGGACCTGCCGCAC
ATCCTCCTGCTCGGCCTCGTCATCTCCTACGGCGTCTTCGGCCAGAGGAACGCCGACGCCGATGTGGTGGTGCCCCCGGT
GGCCGCTTCTTCCAAGGTCACCGACGACGACGAGTCCGTGGAGGCCTTCGTCTCCCAGATACTGCAAGGGCCGCTGGTCT
TCGAGGGGAACAGCGGCGACGGA---------GGCAGCGGCGGCGCCAGGGACGGCGCCGTGCAGGCGTGGAGCTCGCAG
TACTACCCCGACGATGCCCTCGTCGTCGTCGCCGACACGGGCGACGCTGGCGAGAAGCCGATTCTCCTGCCGGTGAGGAA
GCTCAAGCCATTGGCCGAAGAATCTGCACCGGGCAATGTAAGTGATGACGCTACCGATGAAGAAGCAGAGTTCCTCCCCA
AGGAAGAAATAGGATACGGCAGCGCGCGCGAAAAAGCCATGTCGTCGCCGTCCTCCGTCCTCGAAGCCGGCTTGACCCTC
TCGCCGTCCTCGCCTCCTCCCCCGCCGCCTCCACCGCAGTTTCGTGGCGGCGCGCGTGGCCTCGGGAAGGCGAGAGCAAG
AAGCTTCAACGAATATGGGGTTGGAGACATGAGCATGAGCGGACGGACGGGTTTACGGAGCAGGTTCCGGTCAAACTCTT
CCATCCAAGCAACGAGGAGGAGCACTTTCACCGACTACGATCCTGTGGCTCCGTCCGACGATCAAGCGGCCGCAGACGAT
GAGGCTGACGAGATGGCCGCGGCCTCGGACAGCTCGTTCAGC---GACGACATGGCCAGGGACGGCGACGATGAACACGA
CGAGGAGGAAGACAACTACGACGAAGAGGGAGAC------GAGGAGGGGCGGCAAGGTGACAACTCCTGCGACGAAGAGC
TTTTCGAGCTGGCGACGAGGCCCGAGCCGGAGGAGGACGAGGTGGACAAGAAGGCTGACGAGTTCATAGCCAAGTTCAGG
GAGCAGATTAGGATGCAGCGGGCTCATCCGGGGCCGGGCAGAAGATGAGCCATCTCATGTGTAATGCACCGCATTTTAAT
GTTTTTTTT-CTTCTTTTGATTGCTCTCATGTAACTACAACCTGAACAAATGGTGTCAATCAGTGGAATAAGTGTGCGCG
GGATATTGTGCGCATCCTCTTTTTCTCACATTTTGTTTGATAAAGCACGTTTTATTGACTCTTAGACAAGAGTAATGCTG
CACATACATAGATTTACCGGACTTAG----GCAGTTGGGTTTTGATCGGAGATTAAAGGGGGGAGAGGGCACCCCGTGAA
AATCAGGGAGAGGTTAGTTAGAAAGAAAGAATCTTAGTCAGCGTTA-------------------TACGTTTAGCATTAT
TGCTTAGACAACATAGCAAAAGCATAACCA----GAAGAGGGGAGTGAAAAGGTTCATTTTTTGTCTCTCGATATAGCGA
CTTGTGCAGTTTTTGTCACTCAACTTCAAAGCCAGACAACTTTTTTGCGAAGCTAAACTACACAACTTGCACCCGAACTT
TTCAAACCGGACAAGATTGGTCTCTCGACCCTGATTTGAATGCTAACTCATTGTGGTTTTGACCAATAGCCGCCCATGGG
GCAATGTATCTCTTCCCTACTCAATGGCCTTCAAATGAGCCACACTTTCTTCTCTCTCCATTTTTGCAAGCTGGAACTGA
ATGAGGCCGGACTGATGAGATGGAGGCAACACACCGTTGTGACATCGATGATTGCTTAGGATACATCGCCTGGTACGATG
GAGATTCGATATGTTGTGTAGGATCCATGACTTCTCATATCTCTACTAGTGCATAAAGAAAACAAATCTTTCACATCCGC
CATTTATGATGGCAATTGTGCTTTAAAGATGAGCATTGGTGTTGGGCCCAAGATTCAAATCTTCACGGTTCCATGCCAAA
CACTCTAACAAGGTGGCTTCGTGCGCCGCCCTTCTCCCTTAAGAGAAGTATTGGATCGCATTGGTGTTATTCTGGTATTG
TATACCTATGTCATTATATGCTGTATGATCATACCACTCATAGTTTGGTTTTCCTTTTCGTTTTTTCCAAATATGAGTGT
ATTCGATCTCTATACGACAATGTTTGCACTCTATTCCAAGCCTTCTTATTCAAAGACAAGCTTTCATCCTTGCAAGAGTC
TCTTTTGATCATATTCATATAGCT--GATTTCATTGGGGTGAGTATCCTCGATTTGTGGAGCCTTTTGAACAGTTTTCGA
GGAAGCCTACAATTCGCTACGCACCCTAGAGATGTCC
>chr2A_6
-----ATGCGGAGCGTCGGAGTTGGTGGCGCGATTCTTGCCCGGCGTCTGGCCTCCTTTAAATAGAGGGAGGACAGAAGG
AGCTTTGCCCCGCGTTGTGTTTAATGTCGGCTCGCTTCGTGAACGGACGTGTGGCCGGAGTAGATTTCTCGTCTTTCATG
TGGGTTAAATAGAGGCATTTGCATGCAGCGAGGAAGTGTGTTTAGCCGGCGTGCAGCGGGCGACGCCCTCGGCCGGCGCG
CCACTTTAATGGACGAGGCAATGAGAGGGCGTGCCTGCCCTGAGCCGTCTTTAATGTGGAGCGTCGCGATCTATGATGAC
ATGAATGTGGGTAGCTGGCGCTGGGCGAGAACGCGTGCGGGCGAGGAAGGAGGGGTTCGGGTTGGCCACGGTAGTCAGAA
ACATACGTGGGTGGTGTCCGGACGCCCTCAAAGCCCCACGTTTGTCTCCAGTTTATGAAAAAAAGTATGTCCAAACCGAG
CCGCGGATCAATATAGGCCCGTGTTGGATGAGTTCCGTGGTCTGGATAACGCGGCGCGCGGTTTAAGTATTGG------A
GATGCCCTAACATAGCACGCTCTGTTTTCTGGAGCGTACCTGAACCTAGCGACTGAACAACCCAGAAGTGGACTTGTACG
TCCTTTCAGCGCCGGCTCTGCTGCAAAGTCCAAGCTTCCAAAGCAGAGGAGCTCATCAGCAAACGCGGCGCGTAGCCTAG
AACCGTCCACATGACGAGACCTGCAAACCTCATCCGGTAGGAGAGCCATGGACCATATACGGC-TGGGGCTTGGGCGGCG
ACGGCGTCTGGCAAAGCGCCAAACGCTACGGTTCCGCCGGCCCGGACCACCGCCGGCTCCACCGCCCGCCGCCCCCCCAA
AGGATTACCGCGCATACGAGTCCTTTTCGATCGCCAAATGATTTTTGATCCAGCACGTTCCCGCGGTTTCCCTCCACAGT
TGAACGTTGCCCTCGCCAGGATTAATACTAATCCCGTCCATTCTCTTTGCC---GCTTTGCCTTTGCTCCCATAAATTCT
TTGCCTCCACCCCGAGTTGCTCTTGCTTCCCGACCAAGTCTGCAGCTTCCTCTCTTCTCCAGCAAGAGCGCGGATTCCAT
TCCGTCCGGATTTCCTTCTCGATCGCACTCACAGCCTAGCCTAATAGCCGATCAAACAAACCCGGCCGTCCGTA----GC
CCGAGACCCCAAGTCACGCACAAATTTTCCTCATCTTCTCCCGCAATGGCGGAGCCTGCTCCTGCTCCGGCGCAGCCAAG
AACCGGCGGTGACGATGTCATTTCTGCCAGGTTGCAGCGGGCTCTGGAGCTCTTGTTCCCGTCCAACCTCGCCGGTAAGG
CGGTGCTGTTCGCCGTCGTGGTGGCGCTGCTGCGGATGCTGCCCACGAGCCAGACCCCCGGGATCTGGGACCTGCCGCAC
ATCCTCCTGCTCGGCCTCGTCATCTCCTACGGCGTCTTCGGCCAGAGGAACGCCGACGCCGATGTGG---TGCCCCCGGT
GGTCCCTTCTTCCAAGGTCGTCGACGACGACGAGTCCGTGGAGGCCTTCGTCTCCCAGATACTGCAAGGGCCGCTGGTCT
TCGAGGGAAGCAACGGCGACGGA---------GGC---------GCCAAGGACGGCGGCGTGCAGGCGTGGAGCTCGCAG
TACTACCCCGATGATGCCCTCGTCGTAGTCGCCGACACGGGCGACGCTGGCGAGAAGCCGATTCTCCTGCCGGTGAGGAA
GCTCAAGCCATTGGCCGAAGAATCTGCACCGGGCAATGTAAGTGATGGCGCTACCGATGAAGAAGCAGAGTTCCTCCCCA
AGGAAGAAATAGGATACGGCGGCGCGCGCGAAAAAGCCATGTCGTCGCCGTCCTCCGTCCTCGACGCCGGCTTGACCCTC
TCGCCGTCCTCGCCTCCTCCCCCGCCGCCTGCGCCGCAGTTTCTTGGCAGCGCGCGTGGCCTCGGGAAGGCCAGAGCAAG
AAGCTTCAACGAATATGGGGTTGGAGACATGAGCATGAGCGGACGGGCGGGTTTACGGAGCAGGTTCCGGTCAAACTCTT
CCATCCAAGCAACGAGGAGGAGCACTTTGACCGGCTACGATCCTGTAGCTCCGTCCGACGATCAAGCGGCCGCAGACGAT
GAGGCTGACGAGATGGCCGCGGCCTCGGACAGCTCGTTCAGCAGCGACGACATGGCCAGGGACGGCGACGATGAACACGA
CGAGGAGGAAGACAACTACGACGAAGAGGGAGAGGGAGAGGAGGAGGGGCGGGAAGGTGACAACTCTTGCGACGAAGAGC
TTTTTGAGCTGGCGACGAGGGCCGAGGCGGAGGAGGACGAGGTGGACAAGAAGGCTGACGAGTTCATAGCCAAGTTCAGG
GAGCAGATTAGGATGCAGCGGGCTCAGCCGGGGCCGGGCAGAAGATGAGCCATCTCATGTGTAATGCACCGCATTTTAAT
GTTTTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr2B_555
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------CATAGCACGCTCTGTTCTCTGGAGCGTCCCTGAACCTAGCGGGTGAACAGCCCAGAAGTGGACTTCTACG
TCCGTTCAGCGCCGGCTCGGCTCCAAAGTCCAAGCCTAAAAAGCAGAGGAGCTCATCAGCAAATGCGCCGCGTAGCCTAG
AACCGTCCACATGACGAGACCTGCAAATCTCATCCGGTAGGAGAGCCATGGACCATATACGGCCTGGGGCTTGGGCGGCG
ACGGCGTTTGGCAAAGCGCCAAACGGTACGGTTGCGCCGGCCCGGACCACCGTCGGCTCCACCGCCCGCCGCCC-CCCAG
AGGATTACCGCGCACACGAGTCCTTTTCGCGCGCCGAATGATTTTTGATCTAGCACGTTCCCGCGGTTTCCCTCCACAGT
TGAACATTGCCCTCGCCAGGATTAATAATCTTTC---CCATTCTCTTTGGGGTTGCTTTGCCTTTGCTCCCATAAATTCT
TTCCGTCCGCCCCGTG------TTGCTTCCCGACCAAGTCTGCAGCTTCCTCTCCTCGCCAGCAAGATCGCGGATTCCAT
TCCGTCCAGATTTCCTTCTCGATCGCACTCACAGCCTAGCCTAATAGCCGATCACACAAACCCGGCCCTCCGTA----GC
CCGAGACCCCAAGTCACGCACAAATTTTCTTCATCTTCTCGCGCAATGGCGGAGCCTGCTCCTGCTCCGGCGCAGCCAAG
AACCGCCGGTGACGATGTTATTTCTGCCAGGTTGCAGCGGGCTCTGGAGCTCTTGTTCCCGTCTAACCTCGCCGGGAAGG
CGGTGCTGTTCGCCGTCGTGGTGGCGCTGCTGCGGATGCTGCCCACGAGCCAGACCCCCGGGATCTGGGACCTGCCGCAC
ATCCTCCTGCTCGGCCTCGTCATCTCCTACGGCGTCTTCGGCCAGAGGAACGCCGACGCCGATGTGG---TGCCCCCGGT
GGCCCCTTCTTCCAGGATCGTCGACGACGACGAGTCCGTGGAGGCCTTCGTCTCCCAGATACTGCAAGGGCCGCTGGTCT
TCGAGGGGAACAGCGGCGACGGAGGCAGCAGCGGC---------GCCAAGGACGGCAGCGTGCAGGCGTGGAGCTCGCAG
TACTACCCCGACGATGCCCTCGTAGTAGTCGCCGACACGGGCGACGCTGGCGAGAAGCCGATTCTCCTGCCGGTGAGGAA
GCTCAAGCCATTGGCCGAAGAATCTGCACCGGGCAATGTAAGTGATGACGCTACCGATGAAGAAGCAGAGTTCCTCCCCA
AGGAAGAAATAGGATACGGCGGCGCGCGCGAACACGCCATATCTTCGCCGTCCTCCGTCCTCGACGCCGGCAAGACCCTC
TCGCCGTCCTCGCCTCCTCCCCCGCCGCCTCCGCCGCAGTTTCGTGGCGGCGCGCGTGGCCTCGGGAAGGCCAGAGCAAG
AAGCTTCAACGAATATGGGGTTGCAGACATGAGCATGAGCGCACGGACGGGTTTACGAAGCAGGTTCAGGTCAAACTCTT
CGATCCAAGCAACGAGGAGGAGCACTTTCACCGGCTACGATCCTGTTGCCCCGTCCGACGATCAAGCGGACGCAGATGAT
GAGGTTGACGACATGGCCGCGGCCTCGGACAGCTCGTTCAGCAGCGACGACATGGCCAGGGACGGCGACGATGAACACGA
CGAGGAGGAAGACAACTACGAAGAAGACGGAGAC------GAGGAGACGCGGGAAGGTGACAACTCTTGCGACGAAGGGC
TTTTTGAGCTGGCGACGAGGCCCGAGGCGGAGGAGGACGAGGTGGACAAGAAGGCTGACGAGTTCATAGCCAAGTTCAGG
GAGCAGATTAGGATGCAGCGAGCTCAGCCGGGGCCGGGCAGAAGATGAGCCATCTCATGTGTAATGCACCGCATTTTAAT
GTTTTTTTTCCTTCTTTTGATTGCTCTCATGTAACTACAACCTGAACAAATGGTGTCAACCAGTGGAATAAGAGTGTGCG
GGATATTGTGCGCATCCTCTTTTTCTCACAATTTGTTTGATAAAGCACATTTTATTGACTCTTT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GACAACATAGCAAAAGCATAACCACAAAGAGGGGGAGTTTGAAAAGGTTGATTTTTGGTCTCTCAACATATCGA
CTTGTGCAGTTTTTGTCACTCAACTTCAAAATCAAACAACTTTTTTGCGAAGCTAAACTACACAACTTGCACCTGAACTT
TTCAAACCAGACAAGTTTGGTCCTTCGACCCTGCTTTCAATGCTAACTCAATGTGGTTTGGACCAATTGTCGTCCACGTG
CCAATGTATCTCTTCCCTGCTCAGTGGCCTTCAAATGAGCCAGACTTTCTTCTCTCTCCATTTTGCGG-GCTGGAACTAA
ATGAGGCCGGACTGATGAGATGGAGGCAGCGCACCATTGTGACATCGATGACTGCGTAGGATACATCGCCTAGTACGGTG
GAGATTCGATATATTGTGTAGGATCCATGACTTCTCATATCTCTACTAGTGCATAAAGAAAAGAAATCTTTCACATCTGC
CATTTATGATGGCAATTGTGCTTCAAAGATGAGTATTGGTGTTGGGCACAGGATTCAAATCTTCACGGTTCCATGCCAAA
CACTCTAACAAGGTGGCTTCGGGATCCGCCCTTCTCTCTTAAGAGAAGTATTGGAT------------------------
--------------------------------------------------------------------------------
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-------------------------------------
>chr2A_2459
AACAC---------------------------------------------------------------------------
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--------------------------------------AACCTGAACAAATGGTGTCTGCCAGTGGAATAAGAGTGTGCG
GGGTATTGTGCGTGTCCTCTTTTTCTCACAATTTGTTTGATAAAGCATGTTTTATTGACTCTTAGACAAGAGTAATGCTG
CACATACATAGATTTATGGGGATTTTACACGCAGTTGGGTTTTGATTGGAGATCAAAAGGGAGAGGGGGCACCCCTTGAA
AATCAGGAGGGGGTTAGTTAGAAAGAAAGAATCTTAGTCAGCGTGTAATTGCATGTAACTCTTTGTACGTTTAGCATTAT
TGCTTAGACAACATAGCAAAAGCATAACCACAAAGAGGAGGGGTTTGAAAAGGTTCATTTTTGGTCTCTCAGTAGAGCGA
CTTGTGCAGTTTTTGTCACTCAACTTCAAAACCAGACAACTTTTTTGTGAAGCTAAACTACACAACTTGCACCTTAACTT
TTCAAATCGGACAAGATTGGTTTCTCGACCCTGGTTTGAATGCTAACTCATTGTGGTTTAGACCAATTGTCGCCCATGTG
GCAATGTATCTCTTCCCTACTGAATGGTCTTCAAATGAGCCACACTTTCTTCTCTCTCCATTTTGCGG-GTTGGAACTGA
ATGAGGCCGGACTGATGAGATGGAGGCAGCGCACCGTTGTGACATCAATGGTTGCGTAGGATACATCGCCTAGTACAGTG
GAGATTTGATATGTTGTGTAGGATCCATGACTTCTCATATCTCTACTAGTGCATAAAGAAAACAAATCTTTCACATCCGT
CATTTATGATGGCAATTGTGCTCCAAAGATGAGTATTGGTGTTGGGCCCAAGATTCAAATCTTCACAGTTCCATGCCAAA
CATTCTAACAAGGTGGCTTCGGGCGCCTCCCTTCTCTCTTAAGAGAAGTATTGGATCGCATTGGTGTTATTATGGTATTG
TATACCTATCTCATTATATGCTAAAGTAGCATACCACTCATAGTTTGGT-TTCCTTTTCGTTTTTG-CAAATATGAGTGT
ATTAGATCTCTATAAGACAATGTTTGCGTTATATCCCAAGCCTTCTTATTGAAAGACATGCTTTCATCCTTGCAAGAGTC
CCTTTTGATCATATTCATATAGCTAGGATTTCAATGGGGCGAGTATCCTCGATTTGTGGAGCCTTTTGAACAGTTTTCAG
GGAAGCCTACAATTCGCTACGCACCCTAGAGATGTCC
>SNPs
-SS-S---S------SS---S------SS-------------S------S-------------------S-S--S-S---
----------S--S-----------------S-S---------S----S----S---------S---S-------S--SS
SS----S---S----------S----S-------S-SS----SS---------------------------S-S--S---
--SS--------S-------S-----S-S--S-S-S-SS--S---------S---S-----S-S-S--S----SSSSS--
-S-----S---S---------SS----S----------------S-S-----S---------S--------SS-S-S-SS
------------S-----S-S-S----S--------SSS--------S-S-----S-SS-S---SS-S-------S-S-S
-S---S-----------S---S--------S-S-S-SSS-SSSS--SSSSSS-SS-SSSSS--S---SSSS--SSSSSS-
---------S-------------S-------------S------S-----------------------------------
----------S--S----------------------------S-------------S-----------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
---S---------------------------------------------------------------S------SSSS--
--------------------------------------------------------------------------------
-------------------------------S----------------------------------S-------------
-------------------------------------------S------------------------------------
-------------------------------------------------------------------SSS----------
----S--------------SS-----------------------------------------------------------
-----------------------------------SSSSSSSSS----S--------S----------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------------------------------------S---------------
--------------------------------S--------------------------------------S--------
--------------------------------------------------------------------------------
---------------------------------S------------S---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-------------S-------------
----S---------------------S-----------------------------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------------------S------------S---S---
------------------------------S-------------------------------------------------
----------------SS--SS--SS--------------------S------S---S---S---S---------S----
-------SS-S---------------------------------SS----------------------------------
------------------------------------S------SS-----------------S-------S---------
------------------------------S------------------------------------------S------
---------------------------------S-------------------------S-------S-S--------S-
----------------------------------------------------------------SSSSS-----------
----------------------------S-S------------------------S---------------S-----S--
--------------------------------------------------------------------------------
-----------------------S---------S----------------------------------------------
---------------------S--------------S----------------------------------S--------
---------S------------SS-SS-S--------------------S---------------SS-------------
---S----------S------------SS-S---S---------------S-------S---------------------
S--------------------------------S-----S--------------------------------------SS
-------------------------------------
>forward_195
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CATTTGAATGCGGCGAGGAG---------------------------------------------
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>reverse_1525
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GCTTCTTCCAAGGTCACCGA--------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------
>forward_522
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GTTGGATGGGGTTCCGTGAT--------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
>reverse_2307
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------CTGCGACGAAGAGC
TTTTCG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>forward_584
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----CCCTAGCATAGCACGCTCTC--------------------------------------------------------
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-------------------------------------
>reverse_2540
--------------------------------------------------------------------------------
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-----------------------------------------------------------TCAGTGGAATAAGTGTGCGC-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------
>forward_2325
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------CCTGCGACGAAGAGC
TTTTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------
>reverse_3314
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------CATTGGTGTTGGGCCCAAGA---------------------------
--------------------------------------------------------------------------------
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-------------------------------------
