>input_sequence_46511
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----------------------------------------ATGACAACGACCAACATGGATCAAACCACCAGTGTTGCGG
CATGTCTCACCATATCGATTTTCTTTCTCACCATCAAAATGATCAAAAGAAGAACTCTGCACCAAGAGGGACCTTCACTT
CCACCAGCTGTGAGTGTTGTTTCACTGTCAGCATATCTGCCTACATTTCTATCCAAGGGCCTATCTGCCGTGATTCAAGA
CCTACACACAAAGATGGGTAGTGTGTTCACAATAAGTCTTTTTGGGCTGAAGAAGGTGACCTTCCTGGTAGGACCAGAGG
TCACAGCCCATTTCTTCCAAGGCTCAGAATCAGAGATCAGGCAGTCCGATATCTACAAAGTCACGGTGCCTGTTTTTGGC
CGAGGGGTTTTGTATGATGTGGACTTGGCTACTAGGAGCAGGCAGATTAGCTTTTGTCTCGATTCGATAAAGCCAATGAA
CTTGAGAGGACACGTTGATTCCATGGTTAAGGAAGTGGAGGTAAGCAACATATATCTGCTATCATCCTACTCTTAATTAT
TTCTCTTTTCATGTTATTATCATTTGGTGGTCCTTTTTT-TCTATTTCATGTTATCACACTCCTTTGTTTTATCATTTCC
TTCTAGTGGGTGTCTTGTCTCAAAATAAAATTTGTGTAGGACTACTTCACAAAATGGGAGCAGCATGGTGTAGTTGACAT
AAAGCATGAGATGGGGAACCTGATCTTGCTGATCGCAAATCGATGCTTGCTTGGAAAACAGTTCCGAGAGAATATGTTTG
AAGAAGTATCCACACTCGCCCATGATATTTTTGATAATGGCTTCCACTTAATCAGCCTCTTCTTCCCATATCTCCCTATC
CCACCACACCATCGTCGTGACAAAGCTCGTGCTAAGCTGGGAGAGATGATCCATGAGGTCGTGAGATCACGTAGGAGTTC
AGGCCAAGCTGAGAATGATGTGCTACAGAAATTTGTAGACTCCAAATACATCAATGGCCGCTCCATGACTGAGAATGAGA
TCGCAGGGCTGCTCATTTGTATGATGTTTGCAGCACAACACACGAGCTCCGCCACCAGTACCTGGACAGGAGCTTGTCTG
CTCAGTCATGGGGAAAGCTACTTGGCTGCTGCTATCGAAGAGCAGAAACGGATCATGGAACGTCATGGGGAACATATAGA
CTACACCATCTTGCAAGAGATGGGAACCTTGCATTGCTGCATCAAAGAGGCGCTGAGGTTGCACTCTCCAGCAATTCTGC
TGATCCGCCATGCAAGCAAGAGCTTCAGTGTGCAAACAAGAGAAGGCTATAAAATTGATATCCCTCAAGGACATACCTTA
GCGACCTGTACTACAGTTAGTAGCAAGCTACCATACATCTATAAAGATCCGGATGTATATGATCCAAGTAGGTTTGGTCC
AGGGAGAGAGGAAGACAAAGTTGGTGGCAAGTTCTCTTATACACCATTTAGTGCTGGGAGGCACTTCTGCTTGGGAGAGG
ATTTTGCTTATACGCAAATTAAGGTGATATGGAGCCATTTGCTGAGGAACTTTGAGCTCGAATTGATCTCCCCTTTCCCG
AAGGAGGAATGGGACAAATTCATTCCAGGGCCTAAAGGTAAAGTGATGGTTAGTTACAAGAGACGAAGACTCACGTGA--
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>chr7B_1_TraesCS7B01G253700
ATACTCCATAGTTATTACAAAATAACAAAAATTCATAGTTATGATCTTTTTGATTTTGTTGTGAATCATACTTTACATGG
CATCTTTTACTACCTTGCAATATTACAATTCCAACGTTAGAAATGGAAAATGTTTTCACATGTACATAAATTGTTAGCTT
CTTCATTTCGTATAGGGATGATAGCTAGCTGCACCAAATAAATAGCTTGGATCTCTACCTCAATTAATTATTATTATTAT
TTCGAGAGTACGCCTAGGCGTACCATAACTTTATAGAAGGCAGAATTATAGGTACAAGATGACTATCACTCGCTGTGAAA
AACGAGTGTAGTCAATTAATTAATTATTATGATATCTGAAGATTCCCCTATAATTCCAAGGGTTTCCTTTTAAACAAATA
AATTAACCATTGGAGTTTGTCAATTAAATTTGTTTTGTCCCGATGCACACAATCTGTTTTCACCACTATTTTTGAAACAA
TAGTCTTTATCTTTTATGATTTTTAATATTTTGAAATAAGTTTAGTCAGTTTATTTCATAACCATGGGTGTAGAAATACT
AGTTGTACCTAAATATATTTCTTTGTATGCGAGATTGAATCCTGCCATGAACCATTTTACAATATATCCATGTTGATAAT
TGGTTATTGTAATATAATTGGACCCTCATTATCATTAATTCTGGTATGTTTAAATGAATGATATTAGGAATTGATGTAGG
ATTTAGCTAGACTCATTTTATTCCGATGATGATTGTACGAATTAGCTACATTGATCCTAACCTTTATACTTTATATCTAA
ATGTCAAGGTAACTATTTGTTGTGCGATGGCTCAGAAGGCTCTAGCATGCATGAAATGTTACATGCCATAAAATTCTGAT
AATTTTGATTAATATAGCAGTTTCCAAGGAGACTTAATTAGCAACAGTGTGAGATAAGACATAAGATAATCGACCACTAA
CTTGACTTCATATATTTCTTGTGTTAGGCTGGTTAGTTTGATGACAACGACCAACATGGATCAAACCACCAGTGTTGCGG
CATGTCTCACCATATCGATTTTCTTTCTCACCATCAAAATGATCAAAAGAAGAACTCTGCACCAAGAGGGACCTTCACTT
CCACCAGCTGTGAGTGTTGTTTCACTGTCAGCATATCTGCCTACATTTCTATCCAAGGGCCTATCTGCCGTGATTCAAGA
CCTACACACAAAGATGGGTAGTGTGTTCACAATAAGTCTTTTTGGGCTGAAGAAGGTGACCTTCCTGGTAGGACCAGAGG
TCACAGCCCATTTCTTCCAAGGCTCAGAATCAGAGATCAGGCAGTCCGATATCTACAAAGTCACGGTGCCTGTTTTTGGC
CGAGGGGTTTTGTATGATGTGGACTTGGCTACTAGGAGCAGGCAGATTAGCTTTTGTCTCGATTCGATAAAGCCAATGAA
CTTGAGAGGACACGTTGATTCCATGGTTAAGGAAGTGGAGGTAAGCAACATATATCTGCTATCATCCTACTCTTAATTAT
TTCTCTTTTCATGTTATTATCATTTGGTGGTCCTTTTTT-TCTATTTCATGTTATCACACTCCTTTGTTTTATCATTTCC
TTCTAGTGGGTGTCTTGTCTCAAAATAAAATTTGTGTAGGACTACTTCACAAAATGGGAGCAGCATGGTGTAGTTGACAT
AAAGCATGAGATGGGGAACCTGATCTTGCTGATCGCAAATCGATGCTTGCTTGGAAAACAGTTCCGAGAGAATATGTTTG
AAGAAGTATCCACACTCGCCCATGATATTTTTGATAATGGCTTCCACTTAATCAGCCTCTTCTTCCCATATCTCCCTATC
CCACCACACCATCGTCGTGACAAAGCTCGTGCTAAGCTGGGAGAGATGATCCATGAGGTCGTGAGATCACGTAGGAGTTC
AGGCCAAGCTGAGAATGATGTGCTACAGAAATTTGTAGACTCCAAATACATCAATGGCCGCTCCATGACTGAGAATGAGA
TCGCAGGGCTGCTCATTTGTATGATGTTTGCAGCACAACACACGAGCTCCGCCACCAGTACCTGGACAGGAGCTTGTCTG
CTCAGTCATGGGGAAAGCTACTTGGCTGCTGCTATCGAAGAGCAGAAACGGATCATGGAACGTCATGGGGAACATATAGA
CTACACCATCTTGCAAGAGATGGGAACCTTGCATTGCTGCATCAAAGAGGCGCTGAGGTTGCACTCTCCAGCAATTCTGC
TGATCCGCCATGCAAGCAAGAGCTTCAGTGTGCAAACAAGAGAAGGCTATAAAATTGATATCCCTCAAGGACATACCTTA
GCGACCTGTACTACAGTTAGTAGCAAGCTACCATACATCTATAAAGATCCGGATGTATATGATCCAAGTAGGTTTGGTCC
AGGGAGAGAGGAAGACAAAGTTGGTGGCAAGTTCTCTTATACACCATTTAGTGCTGGGAGGCACTTCTGCTTGGGAGAGG
ATTTTGCTTATACGCAAATTAAGGTGATATGGAGCCATTTGCTGAGGAACTTTGAGCTCGAATTGATCTCCCCTTTCCCG
AAGGAGGAATGGGACAAATTCATTCCAGGGCCTAAAGGTAAAGTGATGGTTAGTTACAAGAGACGAAGACTCACGTGATT
AGCATCTATTGAAGAACTTGTAAGGGTGTGTAC--TATGTGGTGGATCAAGTAAATTGTTAAGTGTGTAATTTGAAGAGA
GAATAAATGTATCTGTGCTTGGGACTATTTGGTAAAATATGTATTTCAAAAGATTAAGTGTGTAATTTGAAGAGAGAATA
ATGAGTATGTACGTCTGGGACTATAGGTAAAATATGTATTTCAAAAGATTGTGTGTGATTTGAAGGGAGAATAAAGAGTG
TGTACATTTGGGACTATATGTTAAATATGTATTTCATAGAAAGAATAGTGTATGTCTACGTATGTGCACTATCGAATAAG
ATATTGTCCCGAGTGTCGAAAACATTCTGGAAAATTGCCCACACACATGGGTAATATATTTCCTAAGTGTTAAACTTACA
CATGAAAATCCAGTCAGCGAAAAACCCTTTACTGACTGTTTGAAATCATACGGACCATAGAACTATACGCCCAGTGTGCT
TTCGCGAATTCTCAAGAATTGGTCTTAAGGAACAACCTTTAATGGAATACAGTAGACATCCGCGTGGCTTTTCCAATTGT
ACTTTTCCTAACAAAATAGCAGACTTGGCTGCCAGGTGCGCCCAACGGAGCTGGATCATTTTGTTGGCTACCAATCAGGA
AAGTGGCAAACATGGAATTATCCCAATTATTGCTCCAGTTCATATACATGGCATGAA--AAAATTAGGTATTTACCACTA
TCCTGTGATACTTGGTTCATGGCAATAAGTTTGTTGAAATTTTGGTTGTGTCACCAATGCTATGGAAGAAATTGGGCAGA
AGCCACTTCATAATGTTTGCTCAAGTTGCTGGATCATTTAGTTAATACATGATCAACATTTTCTCTATACACATTTAACA
TTTTTCAAATGCTTGATTAACATTTTTCAAATACTTGTTCAACATTTTTCCAAATGCTTGATTAACATTTTTATACACAC
GATAAAAAATCATCATTAATAAGTGATCAAAAATATTTGGAT
>chr7A_674
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---------------------------------ATTGATTCTGGTAT-TTTAAATGAGTGATAATAGGAATTGATTTAGG
ATTTAGCTATACCCCTTTTATTC---TGATGATTGTACTAATTAACTACATTAATCGTAACCTTCATACTTCAAATCTAA
ATGTCAAGATAACTATTTGTTGTGTGATGGCCCAGGGGGCTCTAACATGCATGAAATGTTACATGCTATAAAATCCTGAT
AATTTTGATGAATATAGCGGTTTCCAAGGAGACTTAATTAACAACAATATGACATAAGACATAAGATAATTGACCACTAA
CTTGACTTCATATATTTCTTGTGTTAGGCTGGTTAGTTTGACGACGGCGACCAACATGGATCAAACCACCAGTGTCGCAG
CATGTCTCA-CATAGCAATTTTCTTCCTCACCATCAAAATGATCAAAAGAAGAACTCTGCACCAAGAGGGACCTTCACTT
CCACTTGTTGTGAGTGTTGTCTCACTGTCAACATATTTGCCTACATTTCTATCCAAGGGCCTATCTGCCGTGATTCAAGA
CCTACACACAAAGATGGGCAGTGTGTTCACAATAAGTCTTTTTGGGCTGAAGAAGGTGACCTTCCTGGTTGGACCAGAGG
TCACAGCCCATTTCTTCCAAGGCTCGGAATCGGAGATAAGGCAGTCCAATATCTACAAAGTCACGGTGCCCGTTTTTGGC
CGAGGGGTTTTGTACGATGTGGACTTGGCTACTAGGAGCAGGCAGATTAGCTTTTATCTCGATTCGATAAAGCCAATGAA
CTTGAGAGGCCACGTTGATTCCATGGTTAAGGAAGTGGAGGTAAGCAACATATATCTGCTATCATCCTACTCTTGATTAT
TTCTCTTTTCACGTTATTATCATTTGGTAGTCCTTTTTTCTCTATTTCATGTGATCACACTCCTTTGTTTTATCATTTCC
TTCTAGTGGGTGTCTTATCTCAAAATAAAATTTGTGTAGGACTACTTCACAAAATGGGGGCAGCATGGTGTCGTTGACAT
AAAGCATGAGATGGGGAACCTAATCTTGCTGATCGCAAATCGATGCTTGCTTGGAAAACAGTTCCGAGAGAATATGTTTG
AAGAAGTATCCACGCTCGCTCATGGTATTTTTTATAATGGCTTCCACTTGATCAGCCTCTTCTTCCCATATCTACCTATC
CCACCACACCGTCGTCGTGACAAAGCTCGTGCTAAGCTGGGAGAGATGATCCATGAGGTCGTGAGATCACGTAGGAGTTC
AGGCCAGGCTGAGAATGATGTGCTACAGAAATTTGTAGACTCCAAATACATCAATGGCCGCTCCATGACTGAGAATGAGA
TCGCGGGGCTGCTCATTTGTATGATGTTTGCAGCACAACACACGAGCTCCGCCACCAGTACCTGTACAGGAGCTTGTCTG
CTCAGTCATGAAGAAAGCTACTTGGCTGCTGCTATCGAAGAGCAGAAACGGATCATGGAACGTCATGGGGAACATATAGA
CTACACCATCTTGCAAGAGATGGGAACCTTGCATTGCTGCATCAAAGAGGCACTGAGGTTGCACTCTCCAGCAATTCTGC
TGATCCGCCATGCAAGCAAGAGCTACAGTGTGCAAACAAGAGAAGGCAATAGAATTGATATCCCTCAAGGACATACCTTA
GCAACCTGCACTACAGTTAGCAGCAAGCTACCATACATCTATATGGATCCGGATGTATATGATCCAAGTAGGTTTGGTCC
AGGGAGAGAGGAAGACAAAGTTGGTGGCAAGTTCTCTTATACACCATTTAGCGCTGGGAGGCACTTCTGCTTGGGAGAGG
ATTTTGCTTACACGCAAATTAAGGTGATATGGAGCCATTTGCTGAGGAACTTTGAGCTCGAATTGATCTCCCCTTTCCCG
AAGGAGGAATGGGACAAATTCATTCCAGGGCCTAAAGGTAAAGTGATGGTTAGTTACAAGAGACGAAGAATCATGTGATT
AGCATCTATTGAAGAACTTTGTGAGGATGTGTTCTTATGTGGTGGATCAGGTAAACTGTTAAGTGTGTAATTTGAGGAGA
GAATAAATGTATGCGCAGTTGGGAATATT-GGTAAAATATGTATTTCAAAAGATAAAGTGTGTAGTTTGAAGGGAGAATA
ATGGGTATGTACGTTTGGGACTATAGGTAAAATATGTACTTCAAAAGATTGTGTCTAATTTGAAGGGAGAATAAAGAGT-
-GTACATTTGGGACTACATGTTAAATATGTATTTCAAAGAA-GAATAGTGTATG--------------------------
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-------------------------------------------------------TCATTCTGTTGGCTACCAATCAGGA
AAGTGTCAAACATGGAATCATCACAATTATTGCTTGAGTTCATGTGGTATATTTCATGGAAAATTAGGTCTTTGCCACTA
TATTGTGATATTTGGTGCCTGCCACTAAATTTGTTGAAGTTTTGATTGTGTCACCAATGCTATGGAAGAAATTGGGCAGA
AGCCACTTCTTGATGTTTGCTCAAGTT-----------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----------S---------S-----S-----------S----
---------S--S-S--------SSS------------S-----S-------S---S-------S------S-S------
--------S---------------S------S---SS-------S---------------------S-------S-----
---------S--------S---------------------S-----S-S---S-----------------S---------
-----------------------------------------S---SS----------------------------S--S-
---------S----S-S--------S------------------------------------------------------
----SS-S------------S---------S-----S-------------------------------------------
------------------S--------------------------------------------------S----------
-------------------------S-----S-----S---------S----------------------S---------
--------------S----------------------------------------S------------------------
---------S----------------------------------------------------------------S-----
-----------S----------------S-----------------------S---------------------------
----------------S-----------------------------------------S------------S--------
---------------------S----------------------------------------------------------
-------------S-----S----S-------S----------------S-----------------------S------
----------S---------------------------------------------------------------------
------S-------------------------------------------------------------------------
----S-----------------------------------------------------------S---------------
----------SS--------------------------------------------------------------------
---------------------------------------------------S----------------------------
------------------------S----------------------S---S----------------------------
--S-----S-----------S----------------------SS-----------------------------------
---------------------------------------------------S----------------------------
----------S---------------------------------------------------------------------
---------------------------------------------------------------------S---S------
-------------------SSSSS--SSSSSSS----------------S-----S-------------------S----
------------SS-SSS------S----S------------------------S---------S-------S-------
---S----------S-----------------------S---------------S-S----------------------S
S---------------S-------------------S----S------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------------
-----S------------S---S-----------SS-------S-SSSSSSSS-S-S------------S---S------
-SS-------S-----S-S--S--S---S---------S-----S-----------------------------------
---------S-S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_836
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----------------TTGTTGTGCGATGGCTCAGA--------------------------------------------
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>reverse_1851
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----------ATCGTCGTGACAAAGCTCGT--------------------------------------------------
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>forward_1125
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-----------------------------------------------------------------GAGGGACCTTCACTT
CCACC---------------------------------------------------------------------------
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>reverse_2091
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----------GGGAAAGCTACTTGGCTGCT--------------------------------------------------
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>forward_1927
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-------------------------------------------------------------------CACGTAGGAGTTC
AGGCCAA-------------------------------------------------------------------------
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>reverse_3173
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----------------------------------------------------TAGACATCCGCGTGGCTTTT--------
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