>input_sequence_46477
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------------------------------------ATGCACTTCTACCGCGACCGCCGCCGCCACGTCATCACCACCCA
GACCGAGCACAAGTGCGTCCTCGACTCCTGCAGGTACCTCCAGCAAGAGGGCTTCGAGGTCACCTACCTCCCCGTTCGCC
CCGACGGCCTCATTGACGTCGCGCAGCTCGCCGATGCCATCCGCCCCGACACTGGCCTCGTCTCCGTCATGGCCGTCAAC
AACGAGATCGGCGTTGTCCAGCCGCTCGAGGAGATTGGCCGCATCTGCCGCGAGAAGGGCGTGCCCTTCCACACAGACGC
GGCTCAGGCTCTCGGGAAGATCCCAATTGATGTCAACCAGATGGGGATTGGACTCATGTCACTGTCCGCGCACAAGATTT
ATGGACCCAAGGGTGTCGGTGCGCTCTACCTGCGCCGCCGCCCTCGCATTCGTGTGGAGCCACAGATGAGTGGAGGTGGC
CAGGAACGGGGCATCCGCAGTGGTACGGTGCCCACGCCCATCGTTGTTGGATTTGGTGCTGCCTGCGAAATTGCAGCCAA
AGAGATGGACTACGACGAGAGGAGAGTTAGCGCTCTGCAGCAGCGTCTGCTTGATGGCATCCGTTCCAAGGTTGATGATG
TTGTCATCAATGGTAGCATGGAGCACCGGTATGCGGGCAACCTGAACTTGTCATTTGCATATGTCGAGGGCGAGAGCTTG
CTGATGGGGCTGAAGGAGGTGGCTGTGTCAAGTGGCAGCGCATGCACCAGTGCTAGTTTGGAGCCTTCCTATGTGCTCCG
GGCGCTTGGTGTGGATGAGGACATGGCACACACCTCGATTCGCTTTGGCATTGGCCGCTTCACCACCGAGGAAGAGGTGG
ACAGAGCAACTGAGCTCACTGTCCATCAGGTGCTTAAGCTCCGTGAGATGAGTCCACTCTATGAGATGGCTAAGGCAGGC
ATCGACATCAAGAGCATCCAGTGGTCGCAGCACTGAGACTCTTTTCACAATGCTGTTCGCTGGACTGCTTTAGATGTGCT
CGGATGGACACATACATAGGTATATGGCCTTTAGCTGTTCTT---ATATCTTGTTTTT-TTTCATAAGGCAATATGTACT
ATACCTGCTAGTGGAAGTGAGTGACCTTGAATACTCCTTAAATCTGGTAGGCCACCGCTGGCTAAGTTTTGAGAATGTTA
CCGTGTGTGCAATGTTTTCTCAGTAATAAGCTACAATCATTTGTTTGTGGCAGTTTGCTTTCTATGTAAAATTACCGCAG
ATCACTTTGAGAACCTGATTAATAGAACATAATATGCAATGATGGTTAAAATGCAAGGTTAAGTGCAGCAGAACATGAAA
TCGTTGGTTGTTGATCCCTTCATTACCATGTTATTTCTACAACGGGATGTTGCAAATTTTGTGCTAATATAGAAATGGAC
AGCACAATGTCTTGCTTGAAGGATATCTTTAAATGAAAAAAAATATCTCCAAGCTGAACGTCTGAAATTAATATGTTGTT
CACTTGGCAATGTTCAAAAAAGCGTAAAGCGTAAGCGAAGCGGAAGGCCACAGCTTAGAGCAATGGGCGCTTT-------
--------------AGCGTGTTTTGAAATTGGCTAGACTTTGACAGATTTTGAATAATATACACAGGAAAATAGGAAACA
TGGCACATGGGTAATT-AAA------------------------------------------------------------
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----------------------------------------------------------------------
>chr5D_1_TraesCS5D01G191100
GGCTACCACAACCACTGGATGGACGTTCAATGCTTGAAGGATAGCAACAACATCAGCGGCGACGATGACAGACCAAGCAT
CAACCAAGGTGCCAACGACCTTGGAGGCCATGCCTACGAGGTCACCGTCCGGTAGCTCACTTAGCTGTTTAGG--TTTAA
ATTTCATTCTTTGGTTGTAAGTACATCAAAATTTACAGTCTAGACACAAGCCTATCATCTTAAGATTTTTCGAAGTTAAC
GTAGGCATCTTTTAGTCGACGGGAACGTGTGATCATCAGAATTTAAACCTGATGGGCTGAAGATATCAGTGTCTTTCTGA
CCATCCACTACAGACTGTTTG---------------------AAAGATTGATGCACAGTGAAGATGCCCTAGAGTTTTTT
TATTTTCTTCGAGGCAAGATGCCCTGGATAGGG---TTTGCCGAGAACACGCCCACCGCAACGAAAACCTGGCCCGAACC
G---------------ACAGCGAAGGGCT---CATCAGGATGTGAT--TCGTCGGCTCGTTGCGTGCCCAATTTCCCTTA
GCCCAGCCTCCACCGCCTATCCACCACCACGTCGACGCTCCCCCAACCCCAAGGCCGCAAACCCTCCCCGTCTCGTCTCC
GCATAGCCATTCTCCCCAAATCGCCCCTCCGCAGAAACGGGAGCAGCGCGGCGGCACCCCTGAACCCTACCTCTCCCCAC
CCATGGCCCTCCCCCGCCGCCTCCTCCCCCTCTTCCTCCGCCGCGGCGGCCGCCTCCCCTCCTCCCCCGCCCCCACCCCC
AC------CCGCGCCCTCTCCACGGCCGCCCTGCCGGCCGACGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--CACCGAGTGCAACAACATCGCCGTCAAGGGCGTCATGCACTTCTACCGCGACCGCCGCCGCCACGTCATCACCACCCA
GACCGAGCACAAGTGCGTCCTCGACTCCTGCAGGTACCTCCAGCAAGAGGGCTTCGAGGTCACCTACCTCCCCGTTCGCC
CCGACGGCCTCATTGACGTCGCGCAGCTCGCCGATGCCATCCGCCCCGACACTGGCCTCGTCTCCGTCATGGCCGTCAAC
AACGAGATCGGCGTTGTCCAGCCGCTCGAGGAGATTGGCCGCATCTGCCGCGAGAAGGGCGTGCCCTTCCACACAGACGC
GGCTCAGGCTCTCGGGAAGATCCCAATTGATGTCAACCAGATGGGGATTGGACTCATGTCACTGTCCGCGCACAAGATTT
ATGGACCCAAGGGTGTCGGTGCGCTCTACCTGCGCCGCCGCCCTCGCATTCGTGTGGAGCCACAGATGAGTGGAGGTGGC
CAGGAACGGGGCATCCGCAGTGGTACGGTGCCCACGCCCATCGTTGTTGGATTTGGTGCTGCCTGCGAAATTGCAGCCAA
AGAGATGGACTACGACGAGAGGAGAGTTAGCGCTCTGCAGCAGCGTCTGCTTGATGGCATCCGTTCCAAGGTTGATGATG
TTGTCATCAATGGTAGCATGGAGCACCGGTATGCGGGCAACCTGAACTTGTCATTTGCATATGTCGAGGGCGAGAGCTTG
CTGATGGGGCTGAAGGAGGTGGCTGTGTCAAGTGGCAGCGCATGCACCAGTGCTAGTTTGGAGCCTTCCTATGTGCTCCG
GGCGCTTGGTGTGGATGAGGACATGGCACACACCTCGATTCGCTTTGGCATTGGCCGCTTCACCACCGAGGAAGAGGTGG
ACAGAGCAACTGAGCTCACTGTCCATCAGGTGCTTAAGCTCCGTGAGATGAGTCCACTCTATGAGATGGCTAAGGCAGGC
ATCGACATCAAGAGCATCCAGTGGTCGCAGCACTGAGACTCTTTTCACAATGCTGTTCGCTGGACTGCTTTAGATGTGCT
CGGATGGACACATACATAGGTATATGGCCTTTAGCTGTTCTT---ATATCTTGTTTTT-TTTCATAAGGCAATATGTACT
ATACCTGCTAGTGGAAGTGAGTGACCTTGAATACTCCTTAAATCTGGTAGGCCACCGCTGGCTAAGTTTTGAGAATGTTA
CCGTGTGTGCAATGTTTTCTCAGTAATAAGCTACAATCATTTGTTTGTGGCAGTTTGCTTTCTATGTAAAATTACCGCAG
ATCACTTTGAGAACCTGATTAATAGAACATAATATGCAATGATGGTTAAAATGCAAGGTTAAGTGCAGCAGAACATGAAA
TCGTTGGTTGTTGATCCCTTCATTACCATGTTATTTCTACAACGGGATGTTGCAAATTTTGTGCTAATATAGAAATGGAC
AGCACAATGTCTTGCTTGAAGGATATCTTTAAATGAAAAAAAATATCTCCAAGCTGAACGTCTGAAATTAATATGTTGTT
CACTTGGCAATGTTCAAAAAAGCGTAAAGCGTAAGCGAAGCGGAAGGCCACAGCTTAGAGCAATGGGCGCTTT-------
--------------AGCGTGTTTTGAAATTGGCTAGACTTTGACAGATTTTGAATAATATACACAGGAAAATAGGAAACA
TGGCACATGGGTAATT-AAATAGCATCTAAAATACAGTTCACACCATAGTGAATACACACATCAGGTTCACATGGCAAGC
AAAATAACAACTAAAATGCAGTTCAGTTCAAATAGTCATAAC-TAATGGAGATCATGTGGCCAGAATTTTGCCAGAATAT
GAACGAAGTAGTTCCCGAACAGAGCCTAACAAGAAGATAAATGGCATATTGTCATTATTGTGCAAGCAGACAAGCAAACT
TAGTTATAAAATAACCAAATTCTGGCCAATATTTTTAT-AAAATCGCTTAATCTACCGCTTAGGGCAAAAGCAAAGCAGT
TTGCCATCGCTCAGCG----------CTTAAGCGTCGCTTAAAAACGCTTCCTTGAACACTGTCACTTGATGACTTGATG
TCTTAGTTTGTTTGCTTCGCAACAGGTCATCATGAAATTCAAAGGGCATGCTTACTTCGCAGCCTGATTTTGTAGAGCAC
CTTACACCAAAGTGACCTGATCATATGACA--------TTGTAACTGAATTGCATTTTGCCA--ATAACTCAAATGTCAC
ATGGTTTTCTGTTTTT-ATAGG-TAGTCTGTTTATTTGTTCCATGCAGCCTTTGTTCTGTATGTTGTTTATGATTCTATC
TGATGTTTGCATATCCACTTTAGTTCTTTGA----CTTCTCAACTCCTGTTTATTTTAGTTCATATTGTGTTTAAGATAG
A-------------------------------------------------------------------------------
----------------TAAGTTTATAACTATCAATCTCAGTCTTAC----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------ATTCTATGTTCCTTCCAGTCTGGTGTTTTGTTTCTCACAT
ACTTCCGTTATTTGCATCAAAGAATCTAATCTTCATAATACTATAAGAGCATGGCTTCATACTAATTTACCATATGAATT
CATCTAGATAAAATTCTGTGTGTATATGTTGTTCTCCTGTTCCTTCGGTTGTATA-------------------------
--------------------------------------------------------------------------------
------------------------TGTATTGTCCAATTTTAATCATACTCTTGGTTGTGTTCTT---CAATGTTTTGGTG
CATTCAGTATCCTTATCTCTGTCCGCATCAGCG-TTTCTCTACCTTTGGTACATTTTTAGTGCCGTTTTG
>chr5A_83
ACG-----------------------------------------------------------------------------
-----AAGGTGCCAACGACCTTGGAGGCCATGCCTATGAGGTCACCGTTAGGTACCTCATTTAGTTTAGTTTAGATTTAA
ATTTCATTATTTGGTTGTAAATACATCAAAATTTACAA-----ACACAAGCATATCGTCTTGAGATTTTATGAAGTTATT
GTAGACGTCCCGTAGTTGATGAAAATGTGCGACACTGAGACTTACCCTGATGTGCCAAG-----------GTCTTTCTAA
CCATTCAACTAGCAGACTGGTTCGTGTGTTTTTTCTGATTTAAAAGGTTGATGCATAGTGAAGATGCCCTAGAGTTTTTT
GATTTTCTTTGAGGCAAGATGCCCTGGATAGGGGGGTTTGCCCAGAACACGCCCACCGCAATG-AAACCTGGGCCGAACC
G---------------ACAGCGAAGGGCTGCTCATCAGGATGTGAT--TCGTCGGCTCGTTGCGTGCCCAATTTCC-CTA
GCCCAGCCTCCACCGCCTATCCACCACCACGTCGACGCTCCCCCAACCCCAAGGCCGCAAACCCTCCCCGTCTCGTCTCC
GCAGAGCCATTCTCCCCAAATCGCCCCTCCGCAGAAACGGGAGCAGCGCGGCGGCACCCCTGAACCCTACCTCTCCCCA-
CCATGGCCCTCCCCCGTCGCCTCCTCCCCCTCTTCCTCCGCCGCGGCGGCCGCCTCCCCTCCTCCCCCGCCCCCACCCCC
GC------CCGCGCCCTCTCCACGGCCGCCCTGCCGGCCGACGCCCCCGCCGCGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCGCCATGCTCCCCTTCTACCTCTCCCGCTACGGCAACCCGCACTCCCGCACCCACCTCTACGGCTGGGAGTCGG
ACGCCGCCGTCGAGGAGGCCCGCGCGCGCGTCGCCAGGCTCATCGGCGCCGACCCCAGGGAGATCTTCTTCACCTCGGGC
GCCACCGAGTGCAACAACATCGCCGTCAAGGGCGTCATGCACTTCTACCGCGACCGCCGCCGCCACGTCATCACCACCCA
GACCGAGCACAAGTGCGTCCTCGACTCCTGCAGGTACCTCCAGCAGGAGGGGTTCGAGGTCACCTACCTCCCCGTTCGCC
CCGACGGCCTCATTGACGTCGCGCAGCTCGCCGATGCCATCCGCCCCGACACCGGGCTCGTCTCCGTCATGGCCGTCAAC
AACGAGATCGGCGTTGTCCAGCCGCTCGAGGAGATTGGCCGCATCTGCCGCGAGAAGGGCGTGCCCTTCCACACAGACGC
GGCGCAGGCTCTCGGGAAGATCCCAATTGATGTCAACCAGATGGGGATTGGACTCATGTCGCTGTCTGCTCACAAGATTT
ATGGGCCCAAGGGTGTCGGTGCGCTCTACCTGCGCCGCCGCCCTCGCATTCGCGTGGAGCCACAGATGAGTGGGGGTGGC
CAGGAACGTGGCATCCGCAGTGGCACGGTGCCCACGCCAATTGTTGTTGGATTTGGTGCTGCCTGCGAAATTGCAGCCAA
AGAGATGGACTACGACGAGAGGCGAGTTAGTGCTCTGCAGCAGCGTCTGCTTGATGGCATCCGTTCCAAGGTTGATGATG
TTGTCATCAATGGTAGCATGGAGCACCGGTACGCGGGCAACCTGAACTTGTCATTTGCATATGTCGAGGGCGAGAGCTTG
CTGATGGGGCTGAAGGAGGTGGCTGTGTCAAGTGGCAGCGCATGCACCAGTGCTAGTTTGGAGCCTTCCTATGTGCTCCG
GGCGCTTGGTGTGGATGAGGACATGGCACACACCTCCATTCGATTTGGCATTGGCCGCTTCACCACCGAGGAAGAGGTCG
ACAGAGCAACTGAGCTCACTGTCCATCAGGTGCTTAAGCTCCGGGAGATGAGTCCACTCTATGAGATGGCTAAGGCAGGC
ATCGACATCAAGAGCATCCAGTGGTCGCAGCACTGAGACTCTTATCACAATGCTGTTCGCTGGACTGCTTTAGATGTGCT
CGGATGGACACATACATAGGTATATGGCCTTTAGCTGTTCTTTTTATATCCTG-TTTT-TTTTATAAGGGAATATGTACT
ATACCTGCTAGTGGAAGTGTGTGACCTTGAACACTCGTTGAATCCGGTAGGCCACTGCTGGCTAAGTTTTGAGAATGTTA
CCGTGTGTGCAATGTTTTCTCAGTAATAAGCTACAATCATTTGTTTGTGGCAGTTTGTTTTCTATGCAAAGTTACTGCAG
ATTACTTTGAGAACCTGATTAATAGAACATAGTATGCAATGATGGTTAAATTGCAAGGTTAAGTGCAGCAGAACGTGAAA
TCTTTGGTTGTAGATCCTTTCATTGCCATATTATTTCTACATTGGGATGTTGCAAATTTTGTGCTGATAAAGAAATGGAC
AAGACAATGTCTTGCTTGAAGGATATCTCTAAATGACAAAAGTTATCTCCAATCTGAACATCTGAAATCAATATGTTGTT
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------ACTTGATGACTTGATG
TCTTAGTTTGTTTGCTTTGCAACAAGTCATTGTGAACTTC-AAGGGCATGCTTACTTTGCAGACTGATTTTGTAGAGCAC
CGTACACCAAAATGACCTGATCATATGACAATATGACATTGTAACTGAACTGGATTTCGCCAATATAACTCAAATGTGAC
ATGGTTTTCTGTGTTTTATAGATTTGTCTGTTTATTTGTCCCATTCATCCTTTGTTCTGTATGCTCTTTATGCTTCTGTC
TGATTTTTGCATATCCATTTTAGTTCTTCGGTTTCCTTCTCAACTCTTTATTTATTTATTTCAAATTGAGTTTTAGATAG
GTACTCCCTCCGTTCCAAAATAGATGACCCAACTTTGTACTAGCTTTGTACTAAAGTTAGTACAAAGTTGAGTCATCTAT
TTTGGAACGGAGGGAGTAAGTTTATAACTACCAATATCATACTTACTCCCTCTGTCTGGGTTTATTAGGCCACATCTTAT
TTTGTGCTAAATTTTGATCTGCAAATTTAACTCACAAAATGTATATTATATGTCACAAAAATTATATTGCTGGGAAGCTC
TTTCAAATACAAATCCAATGGTGTACTTTTTGTATCATACTAATATCAGTATGAATTCATCAATATACTAAAAATTATAT
TGCTGGAAAGCCTTACATTATGGGACGAAGGGAGTATATTTTATATATTTTTTGCAATATAGATGATCAAAATCTGACAC
AAAATACAAGGGGCCTAATAAACCCGGAAGGAGGTAGTACATTCTATGTTCCTTCCAGTCTGGTGTTTTGCTTCTCACAT
ATTATTGCTATTCGCATCAATGAAACTAATCTTAATAATACTA--AGAGCATGGCTTCATACTAATTTACCATATGAATT
CATCTAGAC-AAATTCTGTGTGTATATGTTGTTCTCCTGTTCCTTGGGTTGTACTCCCTCCGTCCGGAAATACTCGTCAT
CAAAATGGATAGAAGGGGATGTATCTAGATGTATTTTAGTTCTAGATACATCTCTTTTTATCCATTTTGATGACAAGTAT
TTTCGGATGGAGGGAGTATACTTGTGTATTCTCCAATTTTAATCATACTCTTGGTTGTGTTCTTCACCAATGTTCTGGTG
CATCCAGTATCCTTATCTCTTTCTGCATCAGCGTTTTCTCTACCTTTGGTACATTTTTGGTGCCGTTTTG
>chr5B_412
TTGCCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------GAGAACACGCCCACCGCAACGAAAACCTGGGCCGAACC
GGCGCGTGGCTTCGTGACAGCTGAGGGCT---CATCCGCCACCATTTATCGTCGGCTCGTTGCGTGCCCAATTTCC-TTA
GCCCAGTCTCCACCGCCTATCCGCCACCACGTCGACGCTGACGCTTCCCCAAGGCCGCAAACCCTCCCCGTCTCGTCTGC
GCATAGCCATTCTCCCCAATTCGCCCCTCCGCAGAAACGGGAGCAGCGCGGCGGCACCCCTGAACCCTACCTCTCCCCAC
CCATGGCCCTGCCCCGCCGCCTCCTCCCCCTCTTCCTCCGCCGCGGCGGCCGCCTCCCCTCCTCCCCCGCCCCCGCCCCC
ACCCCCGTCCGCGCCCTCTCCACGGCCGCCTTGCCGGCCGACGCCCTCGCCGCGGAGGAGGAGGACGACTCCATCACCAT
CAAGGGCGTGCGCATCTCCGGCCGCCCGCTCTACCTGGACATGCAGGCGACCACACCCGTGGACCCGCGGGTGCTCGA--
--------------------------------------------------------------------------------
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------CGCCATGCTCCCCTTCTACCTCTCCCGCTACGGCAACCCGCACTCCCGCACCCACCTCTACGGCTGGGAGTCGG
ACGCCGCCGTCGAGGAGGCCCGCGCGCGCGTCGCGAGGCTCATCGGCGCCGACCCCAGGGAGATCTTTTTCACCTCGGGC
GCCACCGAGTGCAACAACATCGCCGTCAAGGGCGTCATGCACTTCTACCGCGACCGCCGCCGCCACGTCATCACCACCCA
GACCGAGCACAAGTGCGTCCTCGACTCCTGCAGGTACCTCCAGCAAGAGGGGTTCGAGGTCACCTACCTCCCCGTTCGCC
CCGACGGCCTCATTGACGTCGCACAGCTCGCCGATGCCATCCGCCCCGACACTGGGCTGGTCTCCGTCATGGCAGTAAAC
AACGAGATTGGCGTTGTCCAGCCGCTTGAGGAGATTGGCCGCATCTGCCGTGAGAAGGGCGTGCCCTTCCACACAGACGC
GGCGCAGGCTCTCGGGAAGATCCCAATTGATGTCAACCAGATGGGGATTGGACTCATGTCACTGTCCGCGCACAAGATTT
ATGGACCCAAGGGTGTCGGTGCGCTCTACGTGCGCCGCCGCCCTCGCATTCGTGTGGAGCCACAGATGAGTGGAGGTGGC
CAGGAACGGGGCATACGCAGTGGCACAGTGCCCACGCCCATTGTTGTTGGATTTGGTGCTGCCTGCGAAATTGCAGCCAA
AGAGATGGACTACGATGAGAGGCGAGTTAGCGCCCTGCAGCAGCGTCTGCTTGATGGCATCCGTTCCAAGGTTGATGATG
TTGTCATCAATGGTAGCATGGAGCACCGGTATGCGGGCAACCTGAACTTGTCATTTGCATATGTCGAGGGCGAGAGCTTG
CTGATGGGGCTGAAGGAGGTGGCTGTGTCAAGTGGCAGTGCATGCACCAGTGCTAGTTTGGAGCCTTCCTATGTGCTCCG
GGCGCTTGGTGTGGATGAGGACATGGCACACACCTCCATTCGCTTTGGCATTGGCCGCTTCACCACCGAGGAAGAGGTGG
ACAGAGCAACTGAGCTCACTGTCCATCAGGTGCTTAAGCTCCGTGAGATGAGTCCACTCTATGAGATGGCTAAGGCAGGC
ATCGACATCAAGAGCATCCAGTGGTCGCAGCACTGAGACTCTTTTCACAATGCTGTTCGTTGGACTGCTTTAGATGTGCT
CGGATGGACACATACATAGGTATATGGCCTTTAGCTGTTCTTGTTATATCTTGTTTTTTTTTCATAAGGGAATATGTACT
ATACCTGCTAGTGGAAGTGCGTGACCTTGAGTACTCCTTAAATCTGGTAGGCCACCGCTGGCTAAGTTTTGAGAATGTTA
CCATGTGTGCAATGTTTTCTCAGTAATAAGCTACAATCATTTGTTTGTGGCAGTTTGCGTTCTATGTAAAATTACTGCAG
ATTACTTTGAGAACCTGATTAATAGAACATAATATGCAACGATGGTTAAAATGCAAGGTTAAGTGCAGCAGAACATGAAA
TCGTTGGTTGTGAATCCC-TCATTACCATGTTATTTCTACAAGGGGATGTTGCAAATTTTGTGCTAATATAGAAATGGAC
AGCACAATGTCTTGCTTGAAGGATATCTTTAAATGAAAAAAGTTATCTCCAAGCTGAACATCTGAAATTACTATGTTGTT
CACTTGACAATGTTCAAAAAAGCGGAAAGCGTAAGCGAAGCGGAAGGCCACAGCTTAGAGCAATGGGCGCTTT-------
--------------AGCGTTTTTTGAAATTGGCTAGAATTTGACAGATTTTGAATAACATGCACAGGAAAATAGGAAACA
TGGCACATGGGTAATT-AAATAGCATCTGAAATACAGTTCACACCATAGTGAATACACACATCAGGTTCACATGGCAAGC
AAAATAACAACTAAAATGCAGTTCAGTTCAAATAGTCATAAC-TAATAGAGACCATGTGGCCAGAATTTTGCCAGAATAT
GAAGGAAATAGTTCACGAACAGAGCCTAATAAGAAGATAAATGGCATATTGCCATTGTTGTGCAAACATACAAGCAAACA
TAGTTAAAAAACAGCCAAAATCTGGCCATTTAA----AAAAACCCGCTTAATCTACCGCTTAGGGCAAAAGCGAAGCAGT
TTGCCATCGCTCAGTG----------CTTAAGCGTCGCTTAAAAACGCTTCCTTGAACA--GTCACTTGATGACTTGATG
TCTTAGTTTGTTTGCTTCGCAACAGGTCATCATGAAATTCAAAGGGCATGCTTACTTCGCAGCCTGATTTTGTAGAGCAC
CTTACACCAAAGTGACCTGATCATATGACA--------TTGTAATTGAATTGCATTTTGCCA--ATAACTCAAATGTCAC
ATGGTTTTCTGTTTTTTATAGG-TTGTCTGTTTATTTGTTCCATGCATCCTTTGTTCTGTATGTTGTTTATGATTCTATC
TGATGTTTGCCTATCTATTTTAGTTCTTTGA----CTTCTCAACTCCTGTTTATTTTAGTTCATACTGTGTTTTAGATAG
A-------------------------------------------------------------------------------
----------------TAAGTTTATAACTATCAATCTCAGTCTTAC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATTCTATGTTCCTTCCAGTCTGGTGTTTCGTTTCTCACAT
ACTTCTGTTATTTGCATCAAATAATCTAATCTTAATAATACTATAAGAGCATGGCTTCATACTAATTTACCATATGGATT
CGTCTACG--AAATTCTGTGTGTATATGTTGTTCTCCTGTTCCTTGGGTT------------------------------
--------------------------------------------------------------------------------
---------------GTATACTTGTGTATTGTCCAATTTTAATCATACTCTTGCTTTTGTTCTTCACCAATGTTTTGGTG
CATTCAGTAACCTTATCTCTTTCTGCATCAGCG-TTTCTCTACCTTTGGTACATTTTTAGTGCTGTTTTG
>chr1B_2484
--------------------------------------------------------------------------------
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---TTGCCAATGTTCAAGAAAGCGGAAAGCGTAAGCGAAGCGGAAGGCCACAACTTAGAGCAATGAGCACTTG-------
--------------AGCGTTTTTTGAAATTGGCTAGAATTTGACAGATTTTGAATGATATACACATGAAAATAGGAAGCT
TGGCACATGGGTAATTGAAGTAGCATCTGAAATACAGTTCACACAATAGCAAATACAT--ATCAGGTTCGCATAGCAAGC
AAAATAACAACTAAAATGCAGTTCAGTTCAAATAGACGTAACCTAACAGAGATCATGTGGACAGAATTTTGCCAAAATAT
GAAGGAAATAGTTCTTGAACATAGCCTAGTAATAAGATAAATAACATATTGCCATTATTGCACAAGCAGACCAGCAGAAG
TAGTACAAAAATTGCCAAATTTTGGTCAAATTTCAAT-AAAAAACGCTTAATCTACCGCTTAGGGCAAAAGCGAAGCGCT
TTGCCATCGCTCAGCGCTTAATTGCACTTAAGCGTCGCTTAAAAACGCTTTCTTGAACACTG------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr5A_2486
--------------------------------------------------------------------------------
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-----GGCAATGTTCAAAAAAGCGGAAAGCGTAAGCGAAGCGGAAGGCCACAACTTAGAGCAATGGACGCTTA-------
--------------AGCGTTTTTTGAAATTGGCTAGAATTTGACAGATTTTGAATAATATACACAGGAAAATAGGAAACA
CGGCACATGGGTAATTGAAATAGCATCTAAAATACAGTTCACATCATAGCATATAC--ACATCAGGTTCACATAGCAAGC
AAAATAACAACTAAAATGCAGTTCAGTTCAAATAGTCATAACCTAATAGAGATCATGTGG-CAGAATTCTGCCAGAATAT
AAAGGAAATAGTTCCCGAACAGAGCCTAATAATAAGATAAATGACATATTGCCATTATTGCGCAAGCAGACAAGCAAAAG
TAGTTCAAAAACAGCCAAATTCTGGCTAAATTTAAGGAAAAAAACGCTTAATCTACCGCTTAGGGCAAAAGCGAAGCGGT
TTGCCATCGCTCAGCG----------CTTAAGCGTCGCTTAAAAACGCTTTCTTGAACACTG------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr7D_2488
--------------------------------------------------------------------------------
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-------CAATGTTCAAGAAAGCGGAAAGCGTAAGCGAAGCGGAAGGCCACAGCTTAGAGCAATGAGCGCTTAAGCGCAA
CTTAATCGCACTTAAGCGTTTTTTGAAATTGGCTAGAATTTGACAGATTTTGAATGATATACACATGAAAATAGGAAGCA
TGGCACATGGGTAATTGAAGTAGCATCTGGAATACAGTTCACACAACAGCAAATACAT--ATCAGGTTCGCATAGCAAGC
AAAATAACAACTAAAATGCAGTTCAGTTCAAATAGACGTAACCTAACAGATATCATGTGGACAGAATTTTGCCAAAATAT
GAAGGAAATAGTTCTTGAACATAGCCTAGTAATAAGATAAATAGCATATTGCCATTATTGCACAAGCAGACCAGCAGAAG
TAGTACAAAAATTGCCAAATTTTGGTCAAATTTAAAT-AAAAAACGCTTAATCTACCGCTTAGGGCAAAAGCGAAGCGCT
TTGCCATCGCTCAGCG----------CTTAAGCGTCGCTTAAAAACGCTTTCCTGAACACTG------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>SNPs
SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS-------------------------------S-----------SS----S----S----S-SSS-SSS-------
--------S-----------S----------------SSSSSS--------S----S----S-------SS-------SS
----S-S--SSS----S--S-SS--S---S--SSS-S---S--SSSSSSSSS--SSSS-SSSSSSSSSSS--------S-
----S--SSSSSS-SSS-SSS-------------------------S--------S------------------------
S--------S--------------------------------------------------------------S-------
----------------------------------------------------------------------------S---
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----------------------------------------------SSSSSSSSS-------------------------
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---------------------------------------------------S----------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------S--------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------S------------------------------------------------------------
---------------------------------------------------------------------------S----
--S-----------------------------------------------------------------------------
-----------S------------------------------S-------------------------------------
-----------------------------------------SS----------------S--------------------
------------------------S-------------------------------------------------------
-------------------S-----------------S------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
---S---S---------------------S---------------------S---------------------------S
------S------S----------------S--SSSSS-----S----------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S----------------------S--------------------------------
-----------------S-------------------------------------------------------S------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----S---------------------------S----------------------------------------------
--------SS-----------------------------------S-------SS-------------------------
--------------------------------------------------------------------------------
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--------------------S--S----------------------------------------------
>forward_20
GGCTACCACAACCACTGGAT------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_1882
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CGTTGTTGGATTTGGTGCTG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_79
-----------------------------------------------------------CGACGATGACAGACCAAGCA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_2197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GATTCGCTTTGGCATTGGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_263
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AGGCATCTTTTAGTCGACGGG---------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_2636
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CGCAG
ATCACTTTGAGAACCTG---------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_557
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GTTGCGTGCCCAATTTCCC---
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_2905
--------------------------------------------------------------------------------
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------------------------TAAAGCGTAAGCGAAGCGGA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>forward_1943
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--AGATGGACTACGACGAGAGGA---------------------------------------------------------
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----------------------------------------------------------------------
>reverse_3353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------AAAGCAGT
TTGCCATCGCTC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
