>input_sequence_46475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------ATGAGAAGCTGGATTTGCATCAAATCTC
AGCTTCACCACTTCCAGTTCGAGAGAATGGTGAGCTCAACCAAGGGCAAAGTGTGTGTAACTGGGGCCTCAGGCTTTCTC
GCCTCTTGGCTCATCAAAAGGCTTCTCGAGTGTGGATATCATGTGATAGGGACAGTCAGAGACCCAGGT-AATCCTTTGT
AGCATTCCTCTTGATGGCATCATT-ATCGTATATATCTGCAAGCAAATGAACTGAATTTTTGTGGATTTCTGTGAC--TT
GGCAGGGAATCGAAAAAAAGTGGGACACCTTTGGAAACTGCCTGGTGCAAATGAGAGGCTCCAACTTGTGAGAGCTGATT
TATTGGAGGAAGGGAGCTTTGACGATGCTGTGATGGCTTGTGAGGGCGTCTTCCACATCGCATCGCCTGTCCTCGGGAAA
TCCGACTCCAATTGCAAGGTATGCTGCATTTGCTTCAAGCACCCGACTGTATTATCATTACCATGGCATGTGCCTGAATA
TGCTATTCATGTTGCAGGAAGCAACACTTGGTCCTGCAATTAATGGTACCCTAAACGTGCTAAGGTCGTGCAAGAAGAGT
CCGTTTCTCAAAAGGGTTGTTCTCACATCTTCATCGTCCGCGGTGAGGATTAGGGACGAAACTCAGCAGCCAGAACTGTT
GTGGGATGAAACAACGTGGAGCTCTGTGCCACTCTGCGAAAAGCTACAGGTAATGCGGAACATTGTAACACACGTTGTAA
ACTGTACTCCAGATTACATTTCTGCATAAAACTTTGATCTGAAATTGTCCCTCTTCTATGCGCCCAAAAAGCTATGGTAT
GCCCTGGCAAAGGTATTTGCAGAGAAAGCAGCATTGGACTTTGCCAAGGAGAATAACATTGACCTTGTCACCGTTCTTCC
GTCATTCGTGATTGGGCCCAGTTTGTCCCATGAACTGTGTACAACTGCTTCTGATATCCTTGGCTTGCTTCAGGGTATGT
AAGATCTTTCTAG------------------------------------------------------------------C
TCAACATTTTCAAGCTTTTTTCCTGAATGCAAGTCCCTGGCTTCAGATCTAAGAGCATTTTTTGCACCATTCAGA-----
--------------------------------------------------------------------------------
-TCGTTGGCTGCTTCGTTTTTCAAATGCTGTACCCTATGTCCGTCGGCATAGTTGCTAAATGCTGTTATATGTTCTTGCA
GGTGACACGGACAGGTTCACTTCGTATGGGAGGATGGGATATGTTCACATCGACGACGTTGCACGGAGCCACATTCTAGT
GTATGAAACACCCGAGGCAAGGGGCAGATATCTGTGCAGTTCAGTGGTTCTGGATAACAATGAATTGGTTGGCTTACTCA
CAAAGCAGTTTCCAGTATTCCCTATTCCAAGGAGGTCAGTCAATGCAATGCATACAACGCATGCTCACGAGCAGTCT---
--------------------------------------------------------------------------------
----------------------------------------------------------TAACATCTGCTTTTGCTGTGAA
CATACATATTTTTCTTCAATCCATCTCTTGAAGCCAGCATTTTGATCCAAATGCGTACCTTGAAATTGCTCTGCAGGCTC
AACAACCCCTACGGAAAGCAGGCGTATCAGCTAAACACATCCAAGCTCCAGGGGCTGGGCCTCAAGTTCAAAGGAGTGCA
AGAGATGTTCAACGACTGCGTCGAGTCGCTGAAAGCTCAGGGCCATTTGCTGGAGTGCCCGTTGTGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>chr5B_1_TraesCS5B01G271500
GCCCCTACCTCCTGCCCGGCGCCCTCGACCCCTTCGCGGCGCTCGCCTTCACGTCTCGCTCCGGCATCGCCGCCTTCTCC
CGCGCCCTCCCCTCCTCCTCCTCCTCCACCCAGCTTCCCCTCTCCGACGCCGCATCCGCGCTCCCCTTCACTGTGGCGGC
ACTGGGGAGCCACGCCGACCTCCTGGACGGCGCGTTCCTCGCCAGGCTCTGCCGCGACGCCGGGAGGGTGGCCGTCCTCG
TCCCGGACGTCCCCACCCCCGCCGGCCTCGTGGAGGCGCTGGGGCGCGGGTCCGGCCGCCGCGTGCTCTGCCTCGTCCCC
GAGGTCGATGGCCTCCGCGAGCCGCCCGTCGTGCCCGACTTCCTCGCCCGGCTCGACGCGGCCGGGTGGGCGGCCGTGCG
CGCGCCGGCGTACACCACGTGCTGGACCGGCCCGGGCTGCGCCGAGAGGCTGCTGGCCCCGGACGCCGCCGCGCCCGACG
CTATCGTGTTCACCAGCTCGGCGGAGGTCGAGGGGCTGCTCAAGGGGCTGGACGCCGCGGGGTGGAGCTGGCCGCGGCTC
AGGGCGCGGTGGCCCGACATGGTCGTGGCTGCGCATGGGCCAGTCACCGCCGAGGGCGTCAGGAGGCTCGGCATTGAGGT
GGACGTCGTGAGCTCGAGGTTTAGCAGCTTCCATGGGGTTCTTGATGCTCTCGCTGCAACATTTTGTTCTCAACAATTGA
AAATTAGCTCCAGGTTTAGTGCTGGTTCACATTGAAA------------TTTTTTATGTAAACATTCTTTCTTCGAGTCA
CAAGTTATCAGCCTGATGGAATGAACAAAAATATTCAGTCAGCAAACTCATTGCTATTCCACACCAACCTGTCACCTAGA
TATCTTCAGAATGTGCTGTAAATCTGCATTCTACCAACCAAGCTTTGTACCTGTTAATAACTGTGATCACAAAAATGGGG
TGATGAACCATTCTTGATCCTCCTCCTCTAGAATGTTCTTTGACGTGCTTATATGAGAAGCTGGATTTGCATCAAATCTC
AGCTTCACCACTTCCAGTTCGAGAGAATGGTGAGCTCAACCAAGGGCAAAGTGTGTGTAACTGGGGCCTCAGGCTTTCTC
GCCTCTTGGCTCATCAAAAGGCTTCTCGAGTGTGGATATCATGTGATAGGGACAGTCAGAGACCCAGGT-AATCCTTTGT
AGCATTCCTCTTGATGGCATCATT-ATCGTATATATCTGCAAGCAAATGAACTGAATTTTTGTGGATTTCTGTGAC--TT
GGCAGGGAATCGAAAAAAAGTGGGACACCTTTGGAAACTGCCTGGTGCAAATGAGAGGCTCCAACTTGTGAGAGCTGATT
TATTGGAGGAAGGGAGCTTTGACGATGCTGTGATGGCTTGTGAGGGCGTCTTCCACATCGCATCGCCTGTCCTCGGGAAA
TCCGACTCCAATTGCAAGGTATGCTGCATTTGCTTCAAGCACCCGACTGTATTATCATTACCATGGCATGTGCCTGAATA
TGCTATTCATGTTGCAGGAAGCAACACTTGGTCCTGCAATTAATGGTACCCTAAACGTGCTAAGGTCGTGCAAGAAGAGT
CCGTTTCTCAAAAGGGTTGTTCTCACATCTTCATCGTCCGCGGTGAGGATTAGGGACGAAACTCAGCAGCCAGAACTGTT
GTGGGATGAAACAACGTGGAGCTCTGTGCCACTCTGCGAAAAGCTACAGGTAATGCGGAACATTGTAACACACGTTGTAA
ACTGTACTCCAGATTACATTTCTGCATAAAACTTTGATCTGAAATTGTCCCTCTTCTATGCGCCCAAAAAGCTATGGTAT
GCCCTGGCAAAGGTATTTGCAGAGAAAGCAGCATTGGACTTTGCCAAGGAGAATAACATTGACCTTGTCACCGTTCTTCC
GTCATTCGTGATTGGGCCCAGTTTGTCCCATGAACTGTGTACAACTGCTTCTGATATCCTTGGCTTGCTTCAGGGTATGT
AAGATCTTTCTAG------------------------------------------------------------------C
TCAACATTTTCAAGCTTTTTTCCTGAATGCAAGTCCCTGGCTTCAGATCTAAGAGCATTTTTTGCACCATTCAGA-----
--------------------------------------------------------------------------------
-TCGTTGGCTGCTTCGTTTTTCAAATGCTGTACCCTATGTCCGTCGGCATAGTTGCTAAATGCTGTTATATGTTCTTGCA
GGTGACACGGACAGGTTCACTTCGTATGGGAGGATGGGATATGTTCACATCGACGACGTTGCACGGAGCCACATTCTAGT
GTATGAAACACCCGAGGCAAGGGGCAGATATCTGTGCAGTTCAGTGGTTCTGGATAACAATGAATTGGTTGGCTTACTCA
CAAAGCAGTTTCCAGTATTCCCTATTCCAAGGAGGTCAGTCAATGCAATGCATACAACGCATGCTCACGAGCAGTCT---
--------------------------------------------------------------------------------
----------------------------------------------------------TAACATCTGCTTTTGCTGTGAA
CATACATATTTTTCTTCAATCCATCTCTTGAAGCCAGCATTTTGATCCAAATGCGTACCTTGAAATTGCTCTGCAGGCTC
AACAACCCCTACGGAAAGCAGGCGTATCAGCTAAACACATCCAAGCTCCAGGGGCTGGGCCTCAAGTTCAAAGGAGTGCA
AGAGATGTTCAACGACTGCGTCGAGTCGCTGAAAGCTCAGGGCCATTTGCTGGAGTGCCCGTTGTGAAAATAGAGACAAC
ACGAACAAGAGCCATAGCCAAACACGTCGCAACTATGTCTAGATCATGTCAGTTCTCGAGTCTTTTTTTTTCCTCTTCAA
ATAATTCCTATGTCGTCTAGTTACTATTACCAAACATCAACTGTCACTCGCAGATTATGCGACTACACGAAATGTTCCCA
TATGCTTTGCAATTGATTCAATCAGCAATGAAACATTTGACACATTGAATAGAGAATTCAGTTACTTTTATCATGCATTT
TGCTGCTGCCTGACTGCCTGGTGTTGCTGACAACTGGCTAACTTCCTCCCTGGGTTGAGCATTTATGCTGCTGTTTATTT
ATTTATTTATTTATTTCAACTCCGCACTCCTGCCACTTACTTCATCATTGCCAGATCACTCCCACAATGAAAAGCCAAAT
TACTAGACAAATCTAGGGTTGAATATGAAT-TTCATCTTAATTTCGAAGTGTGGCGAAGGCCAGACTGAAAGTTTTCTCT
GATGCCATTGTCATCACGTCAATTCTGGATGCACAGCTGACTGGAGTGAGTGGTACACATCACAGGCAG--AATGAGAAG
GTTCCACAATTCAGACCACCAGCACACCCAGCC-------CCAAAACCAACACAATTCACACTTCAGCTGTATTTACACA
CTTACACACCACACCATGGGTTAGGTTCATCTAAAACCCGGTAACTACTTACACCATAAAAACAAAACCCAAAACCCAAA
ACCGAAACCGAAAACCGGTGCCTG-----CCTACTCGGCCAGATCCCTATGTACAACGTATCTGAAGTTGGACTTGTAAG
GCAGCCACTCCACACACTTGTCGATCCGTCTCCTGAGTCGGTGCTGGAGCTGTGCCATCTCCTTCCGCTGGGTCTCCGAC
GTGCTCTCGCACACCAGCTCCACGAGGTGGCGCAGCTCGAGCGCCGCGTCCTTGGCATAGTAGTGGAGCACCTTGGGCAG
CAGGAGGGCCTGCTTCTTCACCGTGACGTTGGCCTGGATGAA
>chr5D_1
GCCCCTACCTCCTGCCCGGCGCCCTCGACCCCTTCACGGCGCTCGCCTTCACCTCCCGCTCCGGCATCGCCGCCTTCTCC
CGCGCCCTCCCCTCCTCCTCCTCC---GCCCAGCTTCCCCTCTCCGACGCCGCGTCGGCGCTCCCCTTCACCGTCGCCGC
ACTCGGCAGCGACGCCGACCTTCTGGACGGCGCCTTCCTCGCCAGGCTCTGCCGCGACGCCGGGAGGCTGGCCGTCCTCG
TCCCGGACGTCCCCACCCCCGCCGGCCTCGTGGAGGCGCTGGGGCGCGGGTCCGGCCGCCGCGTGCTCTGCCCCGTCCCC
GACGTCGACGGCCTCCGCGAGCCGCCCGTCGTGCCCGACTTCCTCGCCCGGCTCGACGCGGCCGGCTGGGCGGCCGTGCG
CGCTCCGGCGTACACCACGTGCTGGGTCGGCCCGGGCTGCGCCGAGCGGCTGGTGGCCCCGGACGCCACCGCGCCCGACG
CCATCGTTTTCACCAGCTCGGCGGAGGTCGAGGGGCTGCTCAAGGGGCTGGACGCCGCGGGCTGGAGCTGGCCCCGGCTC
AGGGCGCGATGGCCCGACATGGTCGTGGCCGTTCATGGGCCGGTCACGGCCGACGGCGTCAGGAGGCTCGGCATTGAGGT
GGACGTCGTGAGCTCGAGGTTTAGCAGCTTCCATGGGGTTCTTGATGCTCTAGCTGCAACATTTTGTTCTCAACAATTGA
AAATTAGCTCCAGGTTTAGTGCTGGTTCACATTGAAA------------ATTTTGATGTAAACTTTCTTTCTTCGAGTCA
CAAGTTATCAGCCTGATGGAATGAACAAAAATATA-AGTCAGCAAACTCAATGCTATTCCACACCAACCTGTCACCTAGA
TATCTTCAGAATGTACTGTAAATCTGCATTCTACCAACCCAGCTTTGTACCTGTTAATAACTGTGATCACAAAAATGGGG
TGATGAACCATTCTTGATCCTCCTCCTCTAGAATGTTCTTTGACGTGCTTATATGAGAAGCTGGATTTGCATCAAATCTC
AGCTTCACCACTTCCAGTTCGAGAGAATGGTGAGCTCAACCAAGGGCAAAGTGTGTGTAACCGGGGCCTCAGGCTTTCTC
GCCTCTTGGCTCATCAAAAGACTTCTTGAGTGTGGATATCATGTGATAGGGACAGTCAGAGACCCAGGTAAATCCTTTGT
AGCATTCCTCTTGATGACATTATT-ATCGTACATATCTGCAAGCAAATGAACTATGGTTTGAACTGTGTATTTGGAATTT
GGCAGGGAATCGGAAAAAAGTTGGACACCTTTGGAAATTACCTGGTGCAAATGAGAGGCTCCAACTTGTGAGAGCTGATT
TATTGGAGGAAGGGAGCTTTGATGATGCTGTGATGGCTTGTGAGGGTGTCTTCCACATTGCATCACCTGTCCTCGGGAAA
TCTGACTCCAATTGCAAGGCATGCTGCATTTGCTTCCAGCACTCGCTC-TATTATCATTACCATGCCATGTACCTGAATA
TGATATTCATTTCGCAGGAAGCAACACTTGGTCCTGCAATTAATGGCACCCTAAACGTGCTAAGGTCGTGCAAGAAGAGT
CCGTTTCTAAAACGGGTTGTTCTCACATCTTCATCGTCTGCAGTGAGGATTAGGGACGAAACCCAGCAGCCAGAACTGTT
GTGGGATGAAACAACGTGGAGCTGTGTGCCACTCTGCGAAAAGCTACAGGTAATACGGAACATT------------GTAA
ACTGTACACCAGATTACATTTCTGCATAAAACTTTGATCTGAAATAGTTCCTCTTCTATGCCCCAAAAAAGCTATGGTAT
GCCCTGGCAAAGGTATTTGCAGAGAAAGCAGCATTGGACTTTGCCAAGGAAAATAACATTGACCTTGTCACTGTTCTTCC
TTCATTCGTGATTGGGCCCAGTTTGTCCCATGAACTGTGTACAACTGCTTCTGATATCCTTGGCTTACTTCAAGGTATGT
AAGGTTTTTCTACTCATTTATCTCCAGTAGGGTGCTAAAACTTACTGTGTGACC-------------TCAGTAATTTAGT
TCAACCTTTTCCAAGTTTTCTCCTGAATGCAAGTCCCTGGCTTCAGATCTAAAAGCATTTTTGGCATCATTTGGTTCGTT
GCTTGTTCTGTTTTTCAAATGGTGTACCCTTTGTAGTTACTCGCTAACTGCTGTTATATGCTCTTGCAGGTGACATTTGG
TTCGTTGCTTGTTCTGTTTTTCAAATGGTGTACCCTTTGTAGTTACTC------GCTAACTGCTGTTATATGCTCTTGCA
GGTGACACGGACAGGTTCACTTCGTATGGAAGGATGGGATATGTTCACATTGACGATGTTGCACGGAGCCACATTCTAGT
GTACGAAACACCCGAGGCAAGGGGCAGATATCTGTGCAGTTCAGTGGTTCTGGATAACAATGAATTGGTTGGCTTACTCA
CGAAGCAGTTTCCAGTATTCCCTATTCCAAGGAGGTAAGTCGATGCAATGCATACAACTCATTCTCACGAGCAGTCTTAG
AGCCTGTTCGGAATTCCGCTAGCTCCGCAAAATCTCCGGAGTTGCAGAGCCAGGAAACCGCAGCTCCATGATTTTCAACA
GTAACTCCCCCCGCTCCGGGAGTGGAGTCGGGGAGCGGAGGTCCTCCGAACAGGGCCTTAATATCTGCTCTTGCTGCAAA
CATACATATTTTTCTTCGAGTCGTCTCTTTCCCGAGTTTTGACTG---AAATGCGTACCTTGAAATCTCTCTGCAGGCTC
AGTAACCCCTATGGAAAGCAGGCGTATCAGCTGAACACATCCAAGCTCCAGGGGCTGGGTCTCAAGTTCAAAGGAGTGCA
AGAGATGTTCAACGACTGCGTCGAGTCGCTGAAAGCTCAGGGCCATTTGCTGGAGTGCCCGTTGTGAAAATAGAGACAAC
ACAAACA--AGCCATAGCCAAACACGTCGCAACTATGTCTAGATCATGTCAGTTCTCGAGTCTTTTTTTTTTCTCTTCAA
ATAATTCCTATGTCGTCTC--TACTATTACCAAACATCAACTGTCACTCGCAGATTATGCGACTACACGAAATGTTTCCA
TATGCTTTGCAATTGATTCAATCAGCAATGAAACATTTGAAACGTTGAATAGAGC--TCAGTTACTTTTATCATGCATTC
TGCTGGCGCCTCACTGCCTAGTGTTTTACCAGT---------TTCCTCCCTGGGTTGAGCATTTATGTTGTTGTTTATTT
TATCG-------------ACTCTGCATTTGTGCCACTTGCTTCACCGTTGTGAGATCGCCGCCACAATGGAAAGCCAAAT
TACTAGACAAATCCAGGGCTGA-TATGAATTTTCACCTGAATTTCGATGTGCAGATAAGATAAGACCGACAATTTTCTCT
AA------TGCCATCATGTCAATTCTGGATGCACAGTTGACTAT--TGAGCAGTACACACCACAATGGCAAAATGAGAAG
GTCTCACAATTTAGATCACCAGTACACCCAGCCCCTATAACCAAAACCAACACAATTCACACTTCAGCTGTATTTACACA
CTTACACACCACACCATGGGTTAGGTTCATCTAAAACCCGGTAACTACTTACACCATAAGAACAAAACCAAAAACCA---
----AAACCGAAAACCGGTGCCTGCCCTGCCTACTCGGCCAGATCCCTATGTACAACGTATCTGAAGTTGGACTTGTAGG
GCAGCCACTCCACACACTTGTCGATCTTTCTCCTGAGCCGGTGCTGGAGCTGGGCCATCTCCTTCCGCTGGGTCTCCGAC
GTGCTCTCGCACACCAGCTCCACGAGGTGGCGCAGCTCGAGCGCCGCGTCCTTGGCATAGTAGTGGAGCACCTTGGGCAG
CAGGAGGGCCTGCTTCTTCACCGCGACATTGGCCTGGATGAA
>chr5A_1
GCCCCTACCTCCTGCCCGGCGCTCTCGACCCCTTCGCGGCGCTCGCCTTCACATCCCGCTCCGGCATCGCCGCCTTCTCC
CGCGCCCTCCCCTCCTCCTCCTCCTCCGCCCAGCTTCCCCTCTCCGACGCCGCCTCCGCGCTCCCCTTCACCGTGGCGGC
ACTCGGCAGCGACGCCGACCTCCTGGACGGCGCCTTCCTTGCCAGGCTCTGCCGCGACGCCGGGAGGGTGGCCGTCCTCG
TCCCGGACGTCCCCACCCCCGCCGGCCTCGTGGAGGCGCTGGGGCGCGGGTCCGGCCGCCGCGTGCTCTGCCCTGTCCCC
GACGTCGACGGGCTCCGCGAGCCGCCCGTCGTGCCCGACTTCCTCGCCCGGCTCAACGCGGCCGGGTGGACGGCCATGCG
CGCGCCGGCGTACACCACGTGCTGGGCCGGCCCGGGCTGCGCCGAGCGGCTGGTGGCCCCGGACGCCGCCGCGCCCGACG
CCATCGTGTTCACCAGCTCGGCCGAGGTGGAGGGGCTGCTCAAGGGGTTGGACGCCGCCGGGTGGAGCTGGCCGCGGCTC
AGGGCGCGCTGGCCGGACATGGTCGTGGCCGCGCATGGGCCGGTCACCGCCGAGGGCGTCAGGAGGCTCGGCATTGAGGT
CGACGTCGTGAGCTCGAGGTTTAGCAGCTTCCATGGGGTTCTTGATGCTCTCGCTGCAACATTTTGCTCTCAACAATTTA
AAATTAGCTCCAGGTTTAGTGCTGGTTCACATTGATATGATAGGCGAATTTTTTGATGTAAACTTTCTTTCTTCGAGTCA
CAAATTGTCAGCCTGATGGAATGAACAAAAATATTCAGTCAGCAAACTCATTGCTATTCCACACCAACCTGTCACCTAGA
TATCTCCAGAATGTACTGTAAATCTGCATTCTACCAACCAAGCTTTTTACCTGTTAATAACTGCGATCACAGAAATGGGG
TGGTGAACCATTCTTGATCTTCCTCCTCTAGAACGTTCCTTGACGTGCTTATATGAGAAGCTGGATTTGCAACAAATCTC
AGCTTCACCACTTCCAGTTCGAGACAATGGTGAGCTCAGCCAAGGGCAAAGTGTGTGTAACTGGGGCCTCAGGCTTTCTC
GCCTCTTGGCTCATCAAGAGACTTCTTGAGTGTGGATATCATGTGATAGGGACAGTCAGAGATCCAGGTAT-TCCTTTCT
AGCATCCCTCTTGATGACATTATTTATCGTACATACCTGCAAGCAAATGAACTATGGTTTGAACTGTGTATTTGGAATTT
GGCAGGGAATCGGAAAAAAGTTGGACACCTTTGGAAATTACCTGGTGCAAATGAGAGGCTCCAACTTGTGAGAGCTGATT
TATTGGAGGAAGGGAGCTTTGATGATGCTGTGATGGCTTGTGAGGGTGTCTTCCACATTGCATCACCTGTCCTTGGAAAA
TCTGATTCCAATTGCAAGGCATGCTGCATTTGCTTCAAACCCTCAATC-TATTATTATTACCATGCCATGTACTTGAATA
TGCTATTTATGTTACAGGAAGCAACACTTGGTCCTGCAATTAATGGTACCCTAAATGTGCTAAGGTCGTGCAAGAAGAGT
CCGTTTCTAAAACGGGTTGTTCTCACATCTTCATCGTCCGCGGTGAGGATTAGGGACGAAACCCAGCAGCCAGAACTGTT
GTGGGATGAAACAACGTGGAGCTCTGTGCCACTCTGCGAAAAGCTACAGGTAATACAG---------------------A
ACTGTACTCCAGATTACATTTCTGCATAACACTTTGATCTGAAATTGTTCCTCTTCCATGCGCCCAAAAAGCTATGGTAT
GCCCTGGCAAAGGTATTTGCAGAGAAAGCAGCATTGGACTTTGCCAAGGAGAATAACATTGACCTTGTCACCGTTCTTCC
GTCATTCGTGATTGGGCCCAGTTTGTCCCATGAACTGTGTACAACTGCTTCTGATATCCTTGGCTTACTTCAAGGTATGT
GAGATTTTTCTAGTCATTTATCTCCAATAGGGTGCTAAAAGCATTTTTAGTTGTTGGATCGTTGGCTTCAGTAATTTAAC
TCAACCTTTTCCAAGTTTTCTCCTGAATGCAAGTCCCTGGCTTCAGATCTAAAAGCATTTTTGGCAGCATTTGGATTGTT
GCTTGTTCTGTTTTTCAAATGATGTACCCTTTGTAGTTAGTCGCTAACTGCTGTTCA-----------------------
------------------------------------------------------------------TATATGCTCTTGCA
GGTGACACAGACAGGTTCACTTCGTATGGGAGGATGGGATATGTTCACATCGACGACGTTGCACGGAGCCACATTCTAGT
GTACGAAACACCTGAGGCAAGTGGCAGATATCTGTGCAGTTCAGTGGTTCTGGATAACAATGAATTGGTTGGCTTACTCA
CGAAGCAGTTTCCGGTATTCCCAATTCCTAGGAGGTAAGTCGATGCAATGCATACAACTCATTCTCACGAGCAGTCT---
--------------------------------------------------------------------------------
----------------------------------------------------------TAATATCTGCTCTTGCTGCAAA
TATACATATTTTTCTTCGGTTCATCTCTTTGCCGAATTTTGACTG---AAATGTGTACCTTGAAATCGCTCTGCAGGCTC
AGTAACCCCTATGGAAAGCAGGCGTATCAGCTCAACACATCCAAGCTCCAGGGGCTGGGTCTCAAGTTCAAAGGAGTGCA
AGAGATGTTCAACGACTGCGTCGAGTCGCTGAAAGCCCAGGGCCATTTGCTGGAGTGCCCGTTGTGAAAATAGAGACAAC
ACAAACA--AGCCATAGCCAAACGCGTCGCAACTATGTCTAGATCATGTCAGTTCTCGAGTCTTTTTTTTTTCTCTTCAA
ATAATTCCTATGTCGTCTCGTTACTATTACCAAACATCAACTGTCACTCGCAGATTATGCGACTACACGAAATGTTTCCA
AATGCTTTCCAATTGATTCAATCAGCAATGAAACATTTGACACATTGAATAGAGAATTCAGTTACTTTTATCATGCATTC
TGCTGGCGCCTCACTGCCTAGTGTTTTACCAGT---------TTCCTCCCTGGGTTGAGCATTTATGTTGTTGTTTATTT
TATCG-------------ACTCTGCATTTGTGCCACTTGCTTCACCGTCGTGAGATCGCCGCCACAATGGAAAGCTAAAT
TACTAGACAAATCCAGGGCTGAATATGAATTTTCACCTGAATATCGATGTGCAGATAAGATAAGGCCGACAATTGTCTCT
AA------TGCCATCATGTCAATTCTGGATGCACAGTTGACTGT--TGAGCAGTATACACCACAGTGGCAAAATGAGAAG
CTTTCACAATTCAGATCACCAGTACACCCAGCCCCTATAACCAAAACCAACACAATTCACACTTCAGCTGTATTTACACA
CTTACACACCACACCATGGGTTAGGTTCATCTAAAACCCGGTAACTACTTACACCATAAGAACAAAACCCAAAACCA---
----AAACCCAAAACCGGTGCCTGCCCTGCCTACTCGGCCAGATCCCTATGTACAACGTATCTGAAGTTGGACTTGTAAG
GCAGCCACTCCACACACTTGTCGATCCGTTTCCTGAGTCGGTGCTGGAGCTGTGTCATCTCCTTCCGCTGGGTCTCCGAC
GTGCTCTCGCACACCAGCTCCACGAGGTGGCGCAGCTCGAGCGCAGCGTCCTTGGCATAGTAGTGGAGCACCTTGGGCAG
CAGGAGGGCCTGCTTCTTCACGGCGACGTTGGCCTGGATGAA
>SNPs
----------------------------------------------------S--S------------------------
---------------------------S-------------------------S-----------------S--------
---S--S---S----------------------S----------------------------------------------
------------------------------------------------------------------------S-------
--S-----S-----------------------------------------------------------------------
-------------------------S--------------------S-----S---------------------------
-S------------------------------------------------------------------------------
--------S--------------------S-----------S--------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S--------S----------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----S-----------------------------------------------------
----------------S---S----------S---------------------SSSS---SSSSSS-S-S-S--SS----
------------S--------S---------------S-S----------------------------------------
----------------------S-----------------------S-----------S-----S---------------
--S----------------S----------------------S---SSS----------------S-----S--------
--------------------------------------------------------------------------------
--------S---S-------------------------------------------------S-----------------
------------------------------------------------------S---------SSSSSSSSSSSS----
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-----S-------
-----S--------------------------------------------------------------------------
-----S-----S-SS----S--------------------------------S---------S---S----SS-------
--------------------------------------------------------------------------------
-------SS--S-SS------------S--------S---SSS-SSS-SSSSSS-----S------------S-------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
-S----------------------------------S----S----------------S---S-----------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-------S------SS--
-----------------S--S--------SSSSSS-SSS-SSSSSSSS------------------S-------------
-SS--------S--------------------S--------------------------S--------------------
--------------------------------------------------------------------------------
--S----SS--------------------------------------------------------------S--------
------------------S---------------------------------------------------------S---
-------------------------------------------------------------------------------S
-----SS----S-------S-----SSSSSSSSSSSSSSSSS-------------------------S--S---------
SS-SSSSSSSSSSSSSSS----S---S-SS--------S-----S-S---SS-----S-SS--------S----------
-------------S----S----------------S--S--------S---SS-SS---SSS----S--S-S--------
S-SSSSSS--S-----S-------------------S------SSS----SS-------S-----SSSS-----------
---S-----------S------S---------------------------------------------------------
-----------------------------------------------------------S----------------SSSS
SSSS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S------------------
>forward_108
--------------------------------------------------------------------------------
---------CCCTCCTCCTCCTCCTCCA----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_1272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GTGACTTGG
CAGGGAATCGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------
>forward_426
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGTACACCACGTGCTGGA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1383
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGATGCTGTGATGGCTTGTG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1293
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------GTGACTT
GGCAGGGAATCGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2968
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------AGAGCCATAGCCAAACACGT-----------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
