>input_sequence_46463
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------ATGTCGGCGGCGGCGGCAACAGGGCCGGTGGTGGACGCGGAGTACGTGGCCGAGATCGGGAGGGCGCGCCGGGA
CCTCCGCGCGCTCATCGCCAGCAAGAGCT---------------------------------------------------
-------------------------------------------------GCGCCCCCATCATGCTCCGCCTCGCGTGAGT
TCCTCATCCCCATTTTCTCGCCTGAGCAATGCACG------------TTTTGTAGCTTAACGACGGCGGTGATCATGGTG
CGTGCGTGCAGATGGC----------------------------------------------------------------
--------------------------ATGACGCCGGCACCTACGACAAGAACACCAACACCGGAGGCCCCGACGGCTCCA
TCAGGTT------------------------------------CCCGGAGGAGCTCAGCCACGCCGCGAATGCAGGGCTC
AAGATCGCCGTCGACCTTCTTGGTCAGCACTGTCAGAC-TTGGTTTTGGCTGTTCAGAGTTTCGTTTCTGACCCAATTAA
GCCTGCCAAACTGAATTTAAACATGATGAATAC----------------CTGTGGTGCAGAGCCGATTAAGCAGAAGCAC
CCCAAGATCACGTACGCCGACCTGTACCAGCTCGCCGGAGTCGTGGCCGTCGAGGTCACCGGCGGACCAACCATAGATTT
CGTTCCTGGCAGGAGGGTGAGTTCATGAAAGCAGCAGCAACATTTGCTCTATTAATTGTCGAG-AAAAAACATCAGTTCA
TTACCAT---AGCAACCATGTATCGCAGGATTCTTCAGTTGCCATTGAGGAAGGACGCTTGCCAGATGCTAAGCAAGGTA
ATCAACTTAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AAAAATATCTACTCTAGATTCCAGTGGCACATTGTT
TCTCTTCGTGAATGAAATGTGGGATGCAACCA------------------AAATAACAGTTTCAACTAATGCGCTTGAAT
TAGAGTTTGCTTTCA----ACAGTCAGTGGC---------------------AAATTGCTTATGTTTATCATGTGACCAG
GTGCTTCACACCTCAGGGAAGTTTTCTACCGAATGGGCTTGACCGACAAGGACATAGTAGCACTCTCGGGTGGCCATACT
CTGGTAATATCTCAACGCCTTCTTTTTCGTATTCAGATTCAGATCAGTGTTCATTAATCATAATTC---ATATTCTTGTT
TTGCAATGTACATTATTTTTAGGGGAAAGCTCGTCCGGATAGATCGGGATTTGACGGCGCTTGGACAAAAGATCCTCTCA
AGTTCGACAACTCCTACTTCATGTGAGCACAATCATACCATGTTCATAGACTGCGCTTCAGCTTATAA------------
--------------------------------------------------------------------------------
-------------------------------------CATTTTAAATATTTGTAGAACCAACAGTTCACCACAACCTTGT
CATCACTTGACTTCGTCTGCTGTATATGCTACAGTGAGCTTCTGAAAGGGGACTCTAATGGGCTACTGAAGCTGCCTACA
GACAAGGTTCTCGTGGAGGACGCCGATTTTCGTCGCTTCGTTGAATTATACGCAAAGGTAAAACAGAGTTCAGTTAAGAA
TATCTCCAATCCATGTGCTACATTCATCTTGCTTAGCGTGTGGGAT-ATTATGTTTCGCGCAGGATGAGGATGCCTTCTT
CAGGGACTATGCCGAGTCGCACAAGAAGCTTTCCGAGCTCGGGTTCACGCCTTCTCGCGCTACTCTACTGGCGTGGGGGT
GCAGAGACAAAGCCAAGAGGGCTGTCACGAGAACTACCACTGTCTTTGCGGTTGCGGTTGCCGTCATCGCCTGCGCTTAC
ATCTGTGAATCCAAGAGGAGGCTCAGTGGTTAG-----------------------------------------------
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------------
>chr2B_1_TraesCS2B01G087400
CCGGCTCCAATACTGTAGCTCCTGTTGGCGCCGCCTCCTCGCAGCGCCGTTCTTCTTTCTCTCATCTCTCATGAACACAC
ACCATGAAGAAACTCTACACAGACACA--CACACACACACAACCAAGAAGAAGACCGGCTGTTACTTTGCACGAGAGACC
CTTCTCTTTGGTGGAATAAGAGA-CTACATTGTGTTTTTTCCAGCCCTCTTGGCT-CCGCCTTTTCATTGCTCCAACACA
ACACTTATATACAAAGGACCCAGCCACCTATGTCATGCACCCACGCACTAACCAGGCGCCATTCCCG-------------
-------------------GCCACTAACACCACGCACACGCACCACTAACAGCATGCAGCGCTGCCCACTATTCCTCAAC
GGCCGCATACAACCCGGCCGAGTCCAGCTACCAACTCATGCATGCA----------------------------------
--------------------------------------------------------------------------------
----------AACTAACTCAGCCTATTCTCTTGACTAATACTTATCTTAACTACCATGCATCTCTAGTACTAACGTGGCA
TGCAACGCACACATCACGGTACACTTGGACGTGTACAACACATGTCAAGATTAATCCTAACAGCTCCGTCCCTCCCGCCA
TTGGCCATTGGAACGGCAGACAGAAGGATGGCAAATTTACAGGCTCGTCGGTGAAGCACCGTCAAGTTTACAGTAGTCCC
AAAAATACCTTGGAGACTT-----TGTAAACCCAGACCAGAAGGTACTAGAAACTAAAACTCGGGTGAAGAAACTTGTAG
AAAGCTCTGCCCGCTGCCGCCCACTGATTAACGGCGGGAATC--------------------------------------
--------------------------------------------------------------------------------
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----GCTT-ATCAGCATAAACATGGCAAAGACGTTGCTTTCATCTGGAGAGATCCCATGCTTT-----------------
--------------------------------------------------------------------------------
----------CTCCACGCCTCCAC----------TCCATTCCATTCCTCCCTCTCCT------------TCCTTCCTTCC
TTCCT----GCTGTCCACCCTTTTCTTCTCCCCGACTTCTACAAAACCGCGCTCCATGCCTCTCCAAACC------AACC
AGAGCTCCTTTGTTCCAT-------------------CCAGGCATCAAGAAAGAGACGGAGAAAGGCACACGTTGGGTGC
GTGACCATGTCGGCGGCGGCGGCAACAGGGCCGGTGGTGGACGCGGAGTACGTGGCCGAGATCGGGAGGGCGCGCCGGGA
CCTCCGCGCGCTCATCGCCAGCAAGAGCT---------------------------------------------------
-------------------------------------------------GCGCCCCCATCATGCTCCGCCTCGCGTGAGT
TCCTCATCCCCATTTTCTCGCCTGAGCAATGCACG------------TTTTGTAGCTTAACGACGGCGGTGATCATGGTG
CGTGCGTGCAGATGGC----------------------------------------------------------------
--------------------------ATGACGCCGGCACCTACGACAAGAACACCAACACCGGAGGCCCCGACGGCTCCA
TCAGGTT------------------------------------CCCGGAGGAGCTCAGCCACGCCGCGAATGCAGGGCTC
AAGATCGCCGTCGACCTTCTTGGTCAGCACTGTCAGAC-TTGGTTTTGGCTGTTCAGAGTTTCGTTTCTGACCCAATTAA
GCCTGCCAAACTGAATTTAAACATGATGAATAC----------------CTGTGGTGCAGAGCCGATTAAGCAGAAGCAC
CCCAAGATCACGTACGCCGACCTGTACCAGCTCGCCGGAGTCGTGGCCGTCGAGGTCACCGGCGGACCAACCATAGATTT
CGTTCCTGGCAGGAGGGTGAGTTCATGAAAGCAGCAGCAACATTTGCTCTATTAATTGTCGAG-AAAAAACATCAGTTCA
TTACCAT---AGCAACCATGTATCGCAGGATTCTTCAGTTGCCATTGAGGAAGGACGCTTGCCAGATGCTAAGCAAGGTA
ATCAACTTAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AAAAATATCTACTCTAGATTCCAGTGGCACATTGTT
TCTCTTCGTGAATGAAATGTGGGATGCAACCA------------------AAATAACAGTTTCAACTAATGCGCTTGAAT
TAGAGTTTGCTTTCA----ACAGTCAGTGGC---------------------AAATTGCTTATGTTTATCATGTGACCAG
GTGCTTCACACCTCAGGGAAGTTTTCTACCGAATGGGCTTGACCGACAAGGACATAGTAGCACTCTCGGGTGGCCATACT
CTGGTAATATCTCAACGCCTTCTTTTTCGTATTCAGATTCAGATCAGTGTTCATTAATCATAATTC---ATATTCTTGTT
TTGCAATGTACATTATTTTTAGGGGAAAGCTCGTCCGGATAGATCGGGATTTGACGGCGCTTGGACAAAAGATCCTCTCA
AGTTCGACAACTCCTACTTCATGTGAGCACAATCATACCATGTTCATAGACTGCGCTTCAGCTTATAA------------
--------------------------------------------------------------------------------
-------------------------------------CATTTTAAATATTTGTAGAACCAACAGTTCACCACAACCTTGT
CATCACTTGACTTCGTCTGCTGTATATGCTACAGTGAGCTTCTGAAAGGGGACTCTAATGGGCTACTGAAGCTGCCTACA
GACAAGGTTCTCGTGGAGGACGCCGATTTTCGTCGCTTCGTTGAATTATACGCAAAGGTAAAACAGAGTTCAGTTAAGAA
TATCTCCAATCCATGTGCTACATTCATCTTGCTTAGCGTGTGGGAT-ATTATGTTTCGCGCAGGATGAGGATGCCTTCTT
CAGGGACTATGCCGAGTCGCACAAGAAGCTTTCCGAGCTCGGGTTCACGCCTTCTCGCGCTACTCTACTGGCGTGGGGGT
GCAGAGACAAAGCCAAGAGGGCTGTCACGAGAACTACCACTGTCTTTGCGGTTGCGGTTGCCGTCATCGCCTGCGCTTAC
ATCTGTGAATCCAAGAGGAGGCTCAGTGGTTAGGCTGCAAGTCTCCATGTGCAGATAACTGAAAATTCAGTGATGGGTTC
TGAAGACCAAAGTTAAATCTAACATTGAGATGTTGTTCAGTCGTATTTGTAACTAATGTGCTGATACAGTGATGAGAATG
CGTGCTACTATCTATCATCTATGTAACATTGTGTAGTTGTAC-----GTGAAATAATGGAAAATACAGTGGTTGTCGATC
GTGCAAGTTTCTACGGGAGTTCCACGGAGTTCTCAAGTGGTAGAAATAATATTTGGCAATGAATAAGCCTCGTGTCACAA
TCGACAACCACTGTAATCTTTGGCAATGAATAATCCGGTAATCTTTCCCAAGTTCACAAGTGAGCATTTTTTGGGAGAAG
AACTCGCATGAAAAGTAAAGAGAAGGGAGTAGGTAGATTAGGGTCTCATTTCCTGAAATTATGTTCAGCATGCAAAGAAA
AATGACAGTGTGTGTTCGGAAAAATGTTCAACGTGTATTAAAAGATGTTCATCTTTTTTTCTAAAATATTCAAGGTGCAT
CTGAAAAAAGTTTACGTTA-ACATGTACTCCAAAAATGTTCACATGTTTCATAAACATGTTCATGATATTTCATAAAAGT
ATAAAATGT---AAACAACTGTCCACATAATTTATAAATATTTTTATGACCATTTAAAAAAGATGTTTATGCATTCAAAA
AATATCTTCGTGACATCTTTAAAAAATAACAACACAATGTAAAAAA-GTTTAGTATCATCCAAAAAATGTCCAACATGTA
TTTTAAAATGTTGAACACTTTA--A-------------------------------------------------------
-------------------------------AAAAACATTCAAACATGTATTTAAAAAAAAATGTTCAGTGTGTATTTGA
AACAATATTCAACATGTATCAACAAATGTTACACGTGTATACAAAAAGTGTACAACATGTACTAAAAAACAAAGTCAACA
TGTATTTGAAATTAATAAATGATACAAAACACATTGAAACAAAACAAGG-AAGAAAACACACAAAATGTTCTAAAATCGG
TCCATAGAATCA
>chr6B_22
---------------------CTGTTGGCGCCGCCTCCTCGCAGCGCCGTTCTTCTTCCTCTCATCTCTCATGAACACAC
ACCATGGAGAAACTCT------ACACA--CACACACACACAACCAAGAAGGACACCGGCTGTTACTTTGCACGAGAGGCC
CTTCTCCTTGGTGGAACAAGAGA-CTACATTGTGTTTTTCCCAGCCCTCTTGGCT-CA--CTTTTCTCATTCATCTTCTC
CAACTTAAATAGCTAAGTACAAGACTG-----------ACCCAAGCACTTGCCAGCCGCCACTCTCGCAGCTGCTAACGC
CCACTAACTCATGCACTAGGCCACTAATCACA------------------------------------------------
-----------------------------ACTAACTCATGCACGCATGCACCACACCGGCCACTATCACATGACCGGGCG
ACTAACCCACTAGCTACATGCATGCAACTAGATAACTACCTTATCCATGCACTCCAGGACTCGGCAACTCCACCGGACGC
CCCGCTCGTAGCAGCCGCGGGACTTGCTGCTAACGAA-------------------------------------------
----------------------------------ACCACGCACATCAAGATTAGTGCTAACATTTCCCCCCTTAATCTTG
ACACGCCTTGCCGTCGACCGTCATCTTGAACGCCTGAGCTCGACGTCTTCACACGCCTCCGC------------------
--------------------------------------------------------------------------------
--------GCCCGCTGCGACGTGCCGTGCGCCCGCCTGTCACCGGAGTTGATGCAGCTTGCGTC---GTCGTCGTCACGG
CCGTGACCCAGCCTGCGGACCCGACCCGACGCATCGACGCCGGTCACACCGCCACGGACCCGACCTGGCGCACTGACGCC
GGTCGCACCGTGCTCCCTCACGACCCCGGCGACATACGCCGAGCTCC---TCCGCCGGCGACACACGCCTGGCGTCCCTC
TGCGTCCCGCACGTCCCGCACGCATCCGACGTGCCCGACGAGCCCGACCGCAGCAGTGCGTCCCGCACGTCCCGCGCGCA
TTCGACGCGCCCGACGAGCCCGACAGCACCAGACGCTCACCACGTGCCGCCTCCGCGTCCGCCATGGCAGCCACCACGCC
GCGCCTACGTGCCACGCACCTTCCACGGTCGTTGCCCCGAGCCGTCGCGACCTATGCGCCACCACGCAGGTCCTTCGCGA
CCTCCTCGTCTCCGCGACCGCCGTGCCCTTCGCGCACACTCCCCACGTCCCCGCGCTCCCAGCCCGCGCTCCCGCCGCGC
ACGTACGCGGTCTGCGCAACCAGGTCCAGCGCCTCGACGCGGTCCACTCCCGCGGTCCCGACGCGCTCGACACGTCCAGT
GCGCGCCCATAACACGCACCGGTCGCGTCCGGCTCGCCGCCGCATCTTATTGCCCTGCACCGCCGCGGCCTCCATGCCGC
CATGCAGTGCCTCCACGCCGCCAC----------ACCGTGTTGCACCGCTGCGCCACCACGCAGCGCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TCGGCGGCCTCCGCGGTCGCCGCACGTACGACGTCACC----------------------GCCCGCCGCCT
CCGCCACGCGCTCGCCGCGCGCCGCAGCCGATGCCTCCATGTCGGCCGCGCATGCCCCGTCCGCCGCGGACGCCACCGCG
CGC--CACGGCCGCCCCTCGAACCTTGTGGCTCTGAATACCAAATGTTGGCGCCGCCTCCTCGCAGCGCCGTTCTTCTTC
CTCTCATCTCTCATGAACACACACCATGGAGAAACTCTACACACACACACACACAACCAAGAAGGACACCGGCTGTTACT
TTGCACGAGAGGCCCTTCTCCTTGGTGGAACAAGAGACTACATTGTGTTTTTCCCAGCCCTCTTGGCTCACTTTTCTCAT
T-------------------------------------------------------------------------------
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------------
>chr3B_23
----------------------TGTTGGCGCCGCCTCCTCGCAGCGCCGTTTTTCTTCCTCTCATCTCTCATGAACACAT
ACTATGGAGAAACTCT------ACACAGACACACACACACAATCAAGAAGAAGACCGACTGTTACTTTGCACGAAAGGCC
CTTCTCCTTGGTGGAACAAGAGA-CTACATTGTGTTTTTCCCAGCCCTCTTGGCT-CTTCCTTTTCATTGCTCCAATACA
ACACTTATATACAAAGGACCCAGCCACCTATGTCATGCACTCACGCACACGCA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CCACTAACAGCATGCAGCGCTGCCCACTATTCCTCAATGGCCGCATACAACCCGGCCGAGTCCAGCTACCAACT
CATGCATGTAAACTAACTCAGCCTATTCTCTTGACTAATACTTATCTTCACTACCATGCATCTCTAGTACTAACGTGACA
TGCAACACACCCATCACGGCACACTTGGACGTGCACAACACATGTCAAGATTAATCCTAACATTCTCCCCCTTAATCTTG
ACTTACC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GTCGCCGGAGTTACTGCCGCTCCTGTCATTGTCGTCGTCACGG
CCGTGACCCAGCCCGCGGACCCGACCTGACGCACCGACGCCGGTCTCCGTCACGA-------------------------
------------------------CCCGGCGACATACGCCGAGCTCCATCTCCGCCGGCGACACATGCCTGGCGTCCCTC
CGCGCCTCGCACGTCCCGCGCGCAACCAACGCGCCCGATGAGCCCGACCGCACCAGTGCGTCCCGCACATCCCGCGCGCA
TTCGATGCGCCCGACGAGCCCAACAGCACCAGACGCTCACCGCGTGCCGCCTCCGCGTCCGCCATGGCAGCCGCCACGCC
GCGCCTACGTGTCACGCACCTTCCACGATTGTCGCCCCGAGCCATCGCGACCTCTGCGCCACCACGCAGGTCCTTCGCGA
CCTCCTCGTCTCCGCGACCGCCGTGCCCTTCGCGCGCACTCCCCACGTCCCCGC-------------GCTCCCGCCGCGC
ACGTACGCGATCTGCGCAACCAGGTCCAGCGCCTCGACGCGGTCCATTCCTGCGGTCCAACGCGCCCGGCGT-GTCCAGT
GCGCACCCATAACACGCACCGGTCGCGCCTGGCTCGCCGCCGCATCTTATTGCCCTGCACCGCCGCGGCCTCCATGCCGC
CATGCAGTGCCTCCACGCCGCCAC----------ACCGTGTTGCACCGCTGCGCCACCACGCAGCGCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TCGGCGGCCTCCGCGGTCGCCGCACGTACGACGTCACC----------------------GCCCGCCGCCT
CCGCCACGCGCTCGCCGCGCGCCGCAGCCGATGCCTCCATGTCGGCCGCGCATGCCCCGTCCGCCGCGGACGCCACCGCG
CGCGCCACGGCCGCCCCTCGAACCTTGTGGCTCTGAATACCAAATGTTGGCGCCGCCTCCTCGCAGCGCCGTTCTTCTTC
CTCTCATCGCTCATGAACACACACCATGGAGAAACTCT--ACACACACACACACAACCAAGAAGAAGACCGGCTGTTACT
TTGCACGAGAGGCCCTTCTCCTTGGTGGAACAAGAGACTACATTGTGTTTTTCCCAGCCCTCTTGGCTCTTCCTTTTCAT
TGCTCCAATACAGCACTTATATACAAAGGACCCAGCCACCTATGTCATGCACTCACGCACACGCACCACTAACAGCAT--
------GCAGCGCTGCCCACTATTCCTCAACGGCCGCATACAACCCGGCCGAGTCCAGCTACCAACTC------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------ATGCATGCAA
ACTAACTCAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------CCTATTCTCTTGACTAATACT-
--TATCTT-----------------------CACTACCATG-----------------------CATCTCTAGTACTAAC
GTGACATGCAACACACCCATCACGGCACACTTGGAC--------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------GTGCACAACACATGTCAAGATTAATCCTAACA-
--------------------------------------------------------------------------------
------------
>chr6D_161
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TCTCCTTGGTGAAACACATATGCTACATTGT-TTTTACCCAGCCCTCACGGCTGCA--CTTTTCATTGCTCCAATGCA
ACACTTATATACAAAGGACCCAGCCACTTATATCATGCACTCACGCACTAACCAGGCGTCATTCCCG-------------
-------------------GCCACTAAAAACAC-----------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------CACGCATACGCACCACTAACAACATGC
ACGTTGGCAGCGCTGCCCACTATTCCTCAGCGGCCGCATACAACC-GGCCGTGTCCAGCTAACTACTC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATGCATGCAA
ACTAACTTAGGCTCTGTT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TAGTTCATAAGTCCTGAGAC---TTTTTTTTGTC
--------------------------------------------------------------------------------
---------------------------------------------------------TCAGCTTATAAGTCCCAAGTTCC
TAAAAAGTCTCTACATGTTTGGTTTCTAGGACTTAACATGGACTAAAAGACCATATTACAACTATAAGTCCCTATAAGTC
CCTCCTTGAGAGTCTTATTTCATAAGTCTCAAATGCCCATTTTAAGTCCCTGTAAGTCCTTCCTGTTTGGT---------
------------------------------------------TTAGATGAGACTTAAAGGGGCTTTTTTAAGTCCCTACA
CCAATAAGTCCCTGCAACTAA-----------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ACACCCTCTCACCCTATTCTCTTGACTAATACTA
CTTATCTT-----------------------AACTACCATG-----------------------CATCGCTAGTACTAAC
GTGATATGCAACACACCCATCACGACACACTT-GAC--------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------GTGTACAACACATGTCAAGATTAATCCTAACAG
CCCGTCGCCGCGCCA-----------------------------------------------------------------
------------
>chr2D_632
AGTAGCCTG-----------------------------------------------------------------------
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-AAAATAGCTAGGAGACTT-----TGTAAACCCAAACGAGAAGGTACTAGAAACTAAAACTCGGGTGAAGAAGTTTGCAG
AAAGCTCTGCACGCTGCCGTCCACTGATTAACCGCGGGAATC--------------------------------------
--------------------------------------------------------------------------------
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----ACTTGATCAGCACAAACATGGCAAAGACGTTGCTTTCATCTGGAGAGATCCCATGCTTT-----------------
--------------------------------------------------------------------------------
----------CTCCACGCCTCCACTCCACTCCGTTCCATTCCATTCCTCCCTCTCCC------------TCCTTCCTTCC
TTCCTTGCTGCTGTCCCCCCTTTTCTTCTCCCCGTCTGCTACAAAACCGCGCTCCATGCCTCCTTCCCCTGCTCCAAACC
AGAGCTTCTCTGTTCCGTGCCGACTCCTCTCTACCTCCCAGCCATAAGGAAAGAAACGAAGAAAAACA-ACGTTGGGTGG
CCATGT----------CGTCGGCAACCGGGCCGGTGGTGGACGCGGAGTACGTGGCCGAGATCGAGAGGGCGCGCCGGGA
CCTCCGCGCGCTCATCGCCAGCAAGAGCT---------------------------------------------------
-------------------------------------------------GCGCCCCAATCATGCTCCGTCTCGCGTGAGC
TCCTCATCCCCA-TTTCTCGCTTGAGCAATGCACGTTCTGC-TAGCCTTTTGTAGCTTGACGACGACGGCGATGATGGTG
CG----TGCAGATGGC----------------------------------------------------------------
--------------------------ACGACGCAGGCACCTACGACAAGAACACCAACACGGGAGGCCCCGACGGCTCCA
TCAGGTT------------------------------------CCCGGAGGAGCTCCGCCACGCCGCCAATGCAGGGCTC
AAGATCGCCGTCGACCTTCTTGGTAAGCACTGTCAGATTTTGGTTTTAGCTGTTCAGAGTTTCGTTTCTGATCCAGTTAG
GCCTGTCTAAC---------------TGAATGTAAATCATGCTGGATATCTGTGGTGCAGAGCCGATTAAGCAGAAGCAC
CCCAAGATCACGTACGCGGACCTGTACCAGCTCGCCGGGGTCGTGGCCGTCGAGGTCACCGGTGGACCAACCATAGATTT
CGTTCCTGGCAGGAGGGTAAGTTCATGAAATCCGCAGCAACATTTGCCAT----ATTGTCGAGAAAAAAACATCAGTTCA
TTACCATCATAGCGACCATGTATTGCAGGATTCTTCAGTTGCCATTGAGGAAGGACGCTTGCCAGATGCTAAGCAAGGTA
ACCAACTTACACAAATA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TCTAGATTCCAGTGACACATTGTT
TCTCTTCGTGAACGAAACATGGGATGCAAAAACTTACTATTGCGCTACCCAAA-AACAGTTTCAAGTAACAAGCTTGAAT
TAGAGTTTGCTTAATTCTAACAGCCATTGGCTTAAGGAGAAAAGTGCACTGAAAATTGCTTGTG-TTATCATGTGACCAG
GTGCTTCACACCTTAGGGAAGTCTTCTACCGAATGGGCTTGACCGACAAGGACATAGTAGCACTCTCCGGTGGCCATACT
CTGGTAATATGTCAATGGATTATTTTTC------ATATATAGAGAATTGTTCCTAGGTCATGATTC---AAACTATTGAT
CTGCATTGTACG---TTTTTAGGGGAAAGCTCGCCCGGACAGATCGGGATTCGACGGTGCTTGGACAAAAGATCCTCTCA
AGTTTGACAACTCCTACTTCGTGTACGCATAATTATGACGTGTTCATGGATTGCGCATCAGCTTAAGATTATGTAGTTGT
TGTAATGT------------------------------------------------------------------------
----------------------------------------------------------CATCAGCTCACAACAACCTTAT
CACCACTGGACTTCATCCTCTGTATATGCTGCAGTGAGCTTCTGAAAGGGGACTCCAATGGGCTGCTGAAGCTGCCTACA
GACAAGGTTCTCGTGGAAGATACTGATTTTCGTCGCTTCGTCGAATTGTACGCAAAGGTAAAACAGAACTGAATTCAGAA
TTTCTCCAGTCTATGCTACA-ATGCATCTTGCTGAGCTTGTTGGAT-ATTATCTTTCGCACAGGATGAGGACGCGTTCTT
CAAGGACTACGCCGAGTCGCACAAGAAGCTTTCCGAGCTCGGGTTCACGCCTTCTCGCGCTACTCTACTGGCGTGGGGGT
GCAGAGACAAAGCCAAGAGGGCTGTCACGAGAACTACTGCTGTCTTCGCGGTTGCGGTTGCCGTCATCGCTTGTGCTTAC
ATTTGTGAATCCAAGAGGAGGCTCAGTGGTTAACTTGCAAGTCTCCATGTGCATATAACTGCAAATCTAGTGATGGGCTC
TGAAGAACAAAGTTAAATCGTACATTGAGATGTTGTGCAGTCGT-----------------TGATACAACGATGAGAATG
TGTGCTACTA--TATCATCTATGTAACATTGTCAAGTTGTATAGACGGTGAAATAAGGAAAATTACAGTGGTTGTCGATC
GTGCAAGTTTCTACGGGAGTTCCTCGGAGTCCTCAAGTGGTAAAAATAATCTTTGGCAATGAATAAGTGTCGTGTCACAA
TCGACAAACACTGTAATCTTTGGCAATGAATAATCCGGTAATCTTTCTCAAGTTCTCAAGTGAGCATTTTTTGGAAGAAG
AACTCGCATGAAAAGTAAAGAGAAGGGAGTAGGTAGATTAGGGTCTCATTTCCTGAAAATATGTTCAGCATGTAAAGAAA
A-TGACAACGTCTGTTCGAAAAAATGTTCAACGTATATTAAAAAAATGTTCATACTTTTTTTAAAATATTCAAGGTGCAT
CTGAAAAGTTTTTACGTTCGACATGTACTCAAAAAATGTTCATGTGTTTCATAAATATGTTCATGATATTTCAAAAATGT
ATATAAAATGTAAAAAAACTGTTCACACAATTTCAAAATATATTTCTGACCATTTAAAAAAGATGTTCATGCATTCCAAA
AATATTTTCATGACATCTTTAAAAAATAATAACACACTGAAAAAA-TGGTTAGTATCATCCAAAAAATGTCCAACATGTA
CGTAAAAATGTTCAACACTTTTTGA-------------------------------------------------------
-------------------------------AAAAACCATCAAACATGTATTTGAAAGAA--TGTTCAGCGTGTATTTGA
AACAATATTCAACATGTATCAAAAAATGTTAT----------AAAAAGTGTGCAACATGTACTATTAAACAAAGTCGACA
TGTATTTGAAATTAATAAATGATATAAAGCACATTGAAACAAAACAAGG-A--AAAACACACAAAATGTTCTAAAATCGG
-CCATAGAATCA
>chr2A_642
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-AAAATACCTAGGAGACTTGTATGTGTAAACCCAAAG--GAAGGTACTAGAAGCTAAAACTCGGGAGGAGAAGCTTGCAG
AAAGCTCTGCACGCTGCCGCCCACTGATTAACCGCGGGAATC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ACTTGATCAGCACAACCATGGCGAAGACGTTGCTTTCATCTGGAGAGATCCCATGCTTT-----------------
--------------------------------------------------------------------------------
----------CTCCGCACCTCCACTCCACTCCGTTCCATTCCATTCCTCCCTCTCCCTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTGCTGCTGTCCCCCCTTTTCTTCTCCCCGTCTGCTACAAAACCGCGGCGCGC----CCTTCCCCTGCTCCAAACA
CT-----------------CCGACTCCTCTCCC----CCAGTCATCAAAACAGAGGTAGAGAAAGCTACACGTTGGACGG
CCATGT----------CGTCGGCGACAGGGCCGGTGGTGGACGCGGAGTACGTGGCCGAGATCGAGAGGGCGCGCCGGGA
CCTCCGCGCGCTCATCGCCAGCAAGAGCT---------------------------------------------------
-------------------------------------------------GCGCCCCCATCATGCTCCGCCTCGCGTGAGT
TCCTCATCCCCA-T-------------AATGCACGTTCATGTTAGCATTTTGTAGCTTAACGACGACGGCGATGATGGTG
CGTGCGTGCAGATGGC----------------------------------------------------------------
--------------------------ATGACGCCGGCACCTTCGACAAGAACACCATCACCGGAGGCCCCGACGGCTCCA
TCAGGTT------------------------------------CCCGGAGGAGCTCCGCCACGCCGCCAATGCAGGGCTC
AAGATCGCCGTCGACCTTCTTGGTCAGCACTGTCAGATTCTGTTTTGTTATGCTCAGAGTTTCGTTTCTGATCGAGTTAA
GCAAGTATAAC---------------TGAATGC----------------CCGTGGTGCAGAGCCAATTAAGCAGAAGCAC
CCCAAGATCACGTACGCCGACCTGTACCAGCTCGCCGGAGTCGTGGCCGTCGAGGTCACCGGTGGACCAACCATAGATTT
CGTCCCCGGCAGGAGGGTAAGTTCATCAAATCAGCAGCAACATTTGCTCTATTAATTGTCGGG-AAAAAAACATCAGTTT
TACCAAT---AGCAACCATGTATTGCAGGATTCTTCAGTTGCCATTGAGGAAGGACGCTTGCCAGATGCTAAGCAAGGTA
ACCAACTTACACAAATAGATAGGCAATTAGTTTTCCTATCTTTATTTTGCATGCCGGCTGTGGCTTTTATTATCCGCTCT
TTGTGAGCCGTTTGGGGACTAGTTTGTAACGGAGTTCATGACCTTTGTTGGACCTATTTGCTTTTAATAAATGTGGTCGT
ATGCATATTTCTGATGCAGAGGCCGAGGCTGCGCCCCTTTTCCAAAAAAAATATTTAGCAGATTCCAGTGGCACATTGTT
TCTCTTCGTGAATGAAATGTGGGATGCAAAAACTTACTATTGCGCTACCCAAATAACAGTTTTAACTAATGCGCTTGAAT
TAGAGTTTGCTTCTG----ACAGTCATTGGCTTAAAGAGAAAAGAGAACTGAAAATTGCTTATGTTTATCATGTGACCAG
GTGCTTCACACCTCAGGGAAGTTTTCTACCGAATGGGCTTGACCGACAAGGACATAGTGGCACTCTCGGGTGGCCATACT
CTGGTACTACGACAACGCCTT-TTTTTC------ATATTGAGAGAATTGTTCATAAGTCATGGTTCTTCAGACTATTGGT
CTGCATTGTACG---TTTTTAGGGGAAAGCTCGTCCCGACAGATCGGGATTCGACGGTGCTTGGACAAAAGATCCACTGA
AGTTCGACAACTCCTACTTCGTGTAAGCATAGTTATGCCAGTCGTAGATTGCACT-------------------------
-------T------------------------------------------------------------------------
----------------------------------------------------------CATCAGCTCAGAACAACCTTGG
CATTGTTGGACTTCATCTTCTGTATATGCTGCAGTGAGCTTCTGAAAGGGGACTCTAATGGGCTACTCAAGCTGCCTACA
GACAAGGTTCTCGTGGAAGATACCGATTTTCGTCGCTTCGTTGAATTATACGCAAAGGTAAAACAGAATTCAATTCAGAA
TATCTCCAATCTGTGTGCTACATTCATCTTGCTTAGCGTGTGGGATTATTATGTTTCGCGCAGGATGAGGATGCCTTCTT
CAGGGACTACGCAGAGTCACACAAGAAGCTTTCCGAGCTCGGGTTCACGCCTTCTCGCGCTACCCTACTGGCGTGGGGGT
GCAGAGACAAAGCCAAGAGGGCTGTCACGAGAACTACCGCTGTCTTTGCGGTTGCGGTTGCCGTCATCGCCTGCGCTTAC
ATCTGTGAATCCAAGAGGAGGCTCAGTGGTTAACTTGCAAGTCTCCATGTGCATATAACTGCAAATTTACTGATGGGCTC
TGAAGAACAAAGTTAAATCGTACATTGAGATGTTGTGCAGTCGTATTTGTAACTGATGTGCTGATACAGCGACGAGAATG
CGTGCTACTATCTATCATATATGTAACATTGTGTAGTTGTATAGACAGTGAAATAAGGGAAATTACAGTGGTTGTTGATC
GTGCAAGTTTCTACGGGAGTTCCTCAGAGCTCTCAAGTGGTAGAAATAATCTTTGGCAATGAATGAGTGTCGTGTCACAA
TCGACGACCACTGCAATCTTTGGCAATGAATAATCCGGTAATCTTTCTCAAGTTCTGAAGTGAGCATTTTTTGGGAGAAG
AACTCGCATGAAAAGTAAAGAGAAGGGAGTACGTAGATTAGGGTCTCATTTCCTGAAAATATGTTCAGCATGTAAAGAAA
AATGAGAACGTGTATTCGAAAAAATGTTCATCTTTTTTTA----------------------------------------
--------------CGTTCAGCATGTACTCAAAAAAAATTCACGTGTTTCATAAATATGTTCATGATATTTCAAAAATGT
ATATAAAATGTAAA-CAACTGTTCACATAATTTTAAAATATATTTCTGACCATTTCAAAAAGATGTTCATGCATTCCAAA
AATATTTTCGTGACATCTTTAAAAAATAATAACACAATGTAAAAACTGTTTAGTATCATCCAAA-AATGTCCAATATGTA
TTTAAAAATGTTCAACACTTTTTGATAAAAATGTCCAACAAGTGGTAGGACCCTTCCCTGGACCCTGCGCAAGCGGGAGC
TACATGCACCAGGTTGCCCTTTTTTTTTGATAAAAATCTGCAAACATGTATTTGAAAGAA--TGTTTAGTGTCTATTTGA
AACAATATTCAACATGTATCAAAAAATGTTACGCGTGTATACAAAAAGTGTACAACATGTACTATTAAACAAAATCAACA
TGTATTTGAAATTAATAAATGATACAAAACACATTGAAACAAAAGAAGGAA--AAAACACTCAAAATGTTCTAAAATCGG
TCCATAGAATCA
>SNPs
SSSSSS-SSSSSSSSSSSSSS------------------------------------S----------------------
------S---------SSSSSS-------------------------------------------------------S--
------S---------S----------------------S-----------------SS-----------------S---
--------------------------------------------------------------------------------
---------------------------S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----------S-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S----------------------------S--
------S---S--------S-------------S----------------------------SS---SS--S-SSSSSSS
SSSSS-S---SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSS-S-SSS-SSSSSSSS-S---SSSSSSSSSSSSSSSSSSS
S---------S-----------------------S--S----------------------------------S----S--
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-----------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
----------------S-----------------S--S------------------------SSSSSS-S----------
------S--S------S------------------------S-----------------------S-------------S
SSSSSSSSS---------S---------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S----------------------------------------------------S---S---S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
-------------------------------------S---------S-----------------------S---S----
-----S-S---SSSSSSSSSSSSSSS-----S------------------------------------------------
--------------------------------------------------------------S-----------------
------------------S-----------S-------------------------------------------------
-----------------------S--------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S--S-SS------------------------
-----------------------------SS-------------------------------------------------
------------SSS-----------S-----------------------------------------------------
--------------------------------------------------------------------------------
----------S----------S------SSSSSS-S---S---SS-S-------S-S----S------------S-----
S----S-----SSSS------------------------S-----------S-----S----------------------
--------------------S---S----S---S--S-------------S-----S-----------------------
--------------------------------------------------------------------------------
---------------------------------------------S-SSS----SSS---S---S----S----------
-------S------S---S-----------S-------------------------------------------------
-----------------S--SS---------------------------------------------S----S--S----
-----------S--------------------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S------------------S-------S-----S---------S--
------S------------SS---------------S-----------------S--------------S----------
-----------------------------------------S--------------S-----S-----------------
-----------------------S--------------------------S----------------SS-----------
-----------------------------------------------S-------S------------------------
----------------------------------------------------------S-------------S-------
-------SS---------S---------------S--------S-SSS-SSSSSS-----S-------------------
-------SSS--------S-----------S------------S-----------S-----------------S---S--
---S--SS--------------S----------SS------S---S---------------------S--------S---
-----S-----------------------S---------------S----------------------------------
---S--------S--------S----------------------------------------------------------
-------------------------------------S---------------S---S--SS------------------
----------------------S---------S--------------------------------S--------------
---------------------------------------------------SS---------------------------
------------
>forward_751
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------AACGGCAGACAGAAGGATGG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_3400
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TAGATCGGGATTTGACGGCG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_776
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTACAGGCTCGTCGGTGAAG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_3657
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------ACCAACAGTTCACCACAACCT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_2488
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------TGACCCAATTAA
GCCTGCCA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_3711
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------ACAGTGAGCTTCTGAAAGGGG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>forward_3497
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------ACCATGTTCATAGACTGCGCT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_4448
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CCAAGTTCACAAGTGAGCATT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
