>input_sequence_46449
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---AGATATAGATAGACGAGCGAAGTGAGTGAGCAGTGCGTGAGTGGGGATGGATCAGCCGGTGCCCTCCATCTGCGGCC
TGCACCCGGGCATCGCCGTCACCGGCTTCTGCTCCGCCTGCCTCCGCGAGCGGCTCGCCGGCCTCCACCCCAGCGACCCC
GCCGACTCGGCGGAGCTCCGCCGCTGCAAGTCCTTCTCCTACGCCCGCTCCGCCGCCGCCTACTTCGAGCCGCAGCGCCG
CTCCTGCGACGCCCGCGGCGCCGCCGCCCTCTTCCACCAAGAGCCAACCTACCTCCCGGGGGAGGAGGAACATCTTCCGC
CAACAGCGGCGGGCAGGCCCATGAAAGACCACATCCACCAAGAGTCCTCCTCCAAGAAGACCGCCGGCACATTCGGGGGA
TTGGGCAAGAAATGGCAGGAATGGCGCCGCAAGAGCAAGCTCAAGAAGCAGGAGCAGGGGCCCATCACCAACAGGGCCGC
CATGCCGCACGAGAATCTCCGGCACCGCAGCTTCCGCGACACGCGCTCCGAGGTCGCCGTCGACGCGCTCGGCCGGCGCT
CCATCGATGTGGACAGCCTCCTCTCGATGGACCCCGGCCGCATCTCGGTGGATGAGCCCCGAGCTTCTTGTGACGGCTAC
CACGGCGCACGGTTGCGCATTCCCCCGATGCTGTCCCTGGTCGAGGATGCGCCCGTCCCACGCTCTGATGGCCAAATCCC
TGTGGAGGAAGACGAGGACACCGAGCCCGGCGGCTGCGCCCAGACAAGGGACTACTACTTGGACTCCTCCAGCTCCAGCA
GGAGGCGCCGGAGCGTGGACCGCTCGTCCTTCTCCAGCCGCAAGTCATTCTCTGATGCCAGTGACCTGCCCAGGATGATG
GCTGGTGCCACTGCCAATGCCAATGCCCGGGTTTCACCGGCCATTGGTGCCGAGTTCTATCAGTACCACCATGCTCAGAG
TCAGAGTGTTCTTGACCATAACCAGCAGTGGGAGCAGGGACCAAATTCTTATTCTCTCCGGAATGATGATATGTCAGGGA
GCATTGATCCGGCGGCATTCCGGGATGGCATCCCTCTGCCGGCCAAGAAGTCTAAGAAGTGGATCAAGGGGTGGAACATC
TGGGGTCTCAAACATAAGAAGAGCAGCACCAAGGAATCTGAAGCTGCCAGTTTGGCCAACAGATCATTCTCGGAGAAGTG
GCCCGAGCTCCGCGCAAGGGGATACAATGGGCAGATGCTCAGGTGCAACAGCAGCGTAAGCGCGAGGAGCTCCTTTGGCA
ATAGTGGTGCAGCAATGGGCGGCGTGAGCGGGAGGAGGAGCAATGTGGAAATGCATGTTAATGGCTTAGGGAGGATGAGG
AAGGATGAGGTTTTACTCGAGAGGAATTTCAGTGCAAGGTACACGCCTTGCACGGTCGACAATGGCGCGATCCCTTATCC
AATCGGGGGTGCCCAATTCAATCGGCGAAATCAGAATGGGATGCCCGGGAAAGGAAGGCCTGCCCGTTCATCCAATTCTT
TGCCTCGTAGCTCGCTCGGGATGTACTGATCTAGCACTGATGAAGGCAGGTTTATGTTCTTCTCCACCATCTTATGTGCC
TTGGCTACAATGTGCATAGCTGTGGTAGCTAGCGTCATCAGA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr4D_1_TraesCS4D01G133900
ACAAGTCTGACAAGATCCTTGTGCTAATTGTGGTGCTGTTGCTTTCAGATGGAAACTAATTGAAGGCCCCATCCAGTCGA
GTCCAGACCATGCATCCTGTGCGAGGTTATGCACAATGATGGTGCTGAATAGCAAGGTGGACATGAGCATTAGCTAGCAG
AAGCTGGTAGGTAGTACAATCCAAAGCAAC------GCACAAGCACAAGCAGCAGCAGGTCGGTCGACCGATCGAT----
CATAAGAGAAAGTTAGCGTGCGTGCATGCATGCA----TGCATCGGTGGAAATTATCATTCATGATGCACTGCATTCTTG
GGAATATTATGATTATGCTCATATCCTGGTCCATCCAGCTAATTATTTGCTATGCCGATGCATCAATTTCACCTACTCCT
ACTA---CTCTTGTGTTTATCATTCATTCACTGGTCACTTGTAATTAGAGGTGTTGGCATGCATGTTTTGTTACCCTGCC
CTTGGGATTTGTTTGTCTGGCCAAAATCGAACTAGACACAGATGTGGGAATGTATGAAGTGAAATGTTAGAGCAA-TGAA
GAATGGAATGGAAACAAACAAATGTAAGTTCTTCTGGAATGTGCAACAAGAGTCCAAGATGGGGGAAAGGGTAAAGCAAA
AGAGGGGG----AAGAGGGACAGGGGCAAGAAAGGAAAAGTGAAAAAGAAAAGGAAAGGAAAGAGGTCGCCATCACTGCC
TCTGCCTGATGAGGTCTGTCTCTTTTGCCTGCTCAGCTCATCCCCTCTCCCAGTTGAGT-------TCAAACAGCAGCAC
CACTCTAGAACACAACACCAACAGGA--GGGGTAGCTTCTCCTCTCAATAGATACAAGAATACAACACAAGAGTCTTCCA
TTCCACTCCTCATCTTGTCTTTCTCCCACATCACAACATCGCAAGTTTCTTTCTTCTCTTCTCTTCTCTTCAGACAAAAA
CATCAGTCTTCCTCTTCTTAAGTAGGAATTCAGTTCGTCAATGGTGCTGCCTCCTTGCCCTTGCCCTTG-----------
-GTAGATATAGATAGACGAGCGAAGTGAGTGAGCAGTGCGTGAGTGGGGATGGATCAGCCGGTGCCCTCCATCTGCGGCC
TGCACCCGGGCATCGCCGTCACCGGCTTCTGCTCCGCCTGCCTCCGCGAGCGGCTCGCCGGCCTCCACCCCAGCGACCCC
GCCGACTCGGCGGAGCTCCGCCGCTGCAAGTCCTTCTCCTACGCCCGCTCCGCCGCCGCCTACTTCGAGCCGCAGCGCCG
CTCCTGCGACGCCCGCGGCGCCGCCGCCCTCTTCCACCAAGAGCCAACCTACCTCCCGGGGGAGGAGGAACATCTTCCGC
CAACAGCGGCGGGCAGGCCCATGAAAGACCACATCCACCAAGAGTCCTCCTCCAAGAAGACCGCCGGCACATTCGGGGGA
TTGGGCAAGAAATGGCAGGAATGGCGCCGCAAGAGCAAGCTCAAGAAGCAGGAGCAGGGGCCCATCACCAACAGGGCCGC
CATGCCGCACGAGAATCTCCGGCACCGCAGCTTCCGCGACACGCGCTCCGAGGTCGCCGTCGACGCGCTCGGCCGGCGCT
CCATCGATGTGGACAGCCTCCTCTCGATGGACCCCGGCCGCATCTCGGTGGATGAGCCCCGAGCTTCTTGTGACGGCTAC
CACGGCGCACGGTTGCGCATTCCCCCGATGCTGTCCCTGGTCGAGGATGCGCCCGTCCCACGCTCTGATGGCCAAATCCC
TGTGGAGGAAGACGAGGACACCGAGCCCGGCGGCTGCGCCCAGACAAGGGACTACTACTTGGACTCCTCCAGCTCCAGCA
GGAGGCGCCGGAGCGTGGACCGCTCGTCCTTCTCCAGCCGCAAGTCATTCTCTGATGCCAGTGACCTGCCCAGGATGATG
GCTGGTGCCACTGCCAATGCCAATGCCCGGGTTTCACCGGCCATTGGTGCCGAGTTCTATCAGTACCACCATGCTCAGAG
TCAGAGTGTTCTTGACCATAACCAGCAGTGGGAGCAGGGACCAAATTCTTATTCTCTCCGGAATGATGATATGTCAGGGA
GCATTGATCCGGCGGCATTCCGGGATGGCATCCCTCTGCCGGCCAAGAAGTCTAAGAAGTGGATCAAGGGGTGGAACATC
TGGGGTCTCAAACATAAGAAGAGCAGCACCAAGGAATCTGAAGCTGCCAGTTTGGCCAACAGATCATTCTCGGAGAAGTG
GCCCGAGCTCCGCGCAAGGGGATACAATGGGCAGATGCTCAGGTGCAACAGCAGCGTAAGCGCGAGGAGCTCCTTTGGCA
ATAGTGGTGCAGCAATGGGCGGCGTGAGCGGGAGGAGGAGCAATGTGGAAATGCATGTTAATGGCTTAGGGAGGATGAGG
AAGGATGAGGTTTTACTCGAGAGGAATTTCAGTGCAAGGTACACGCCTTGCACGGTCGACAATGGCGCGATCCCTTATCC
AATCGGGGGTGCCCAATTCAATCGGCGAAATCAGAATGGGATGCCCGGGAAAGGAAGGCCTGCCCGTTCATCCAATTCTT
TGCCTCGTAGCTCGCTCGGGATGTACTGATCTAGCACTGATGAAGGCAGGTTTATGTTCTTCTCCACCATCTTATGTGCC
TTGGCTACAATGTGCATAGCTGTGGTAGCTAGCGTCATCAGAATCAACTTTTTATAGGCTCAGATCAGAAGGAAGGTCGT
CAAGTGAAGTGGTGATGGTGTTGGATTATATACCTTACTTAGTCTTATTTCCTACTGGGCTTGGGAGTGGAGTATAGCAT
TTAACTTTACACCCTTGTATAAGATATGCCATATGTATGTTTGCTTTTGTCAATTGAATTCAAGTTAGCATTCTGGCAAT
AGCAATAACATGATGTAAGGGCCATGGAATCGAATGCCGGTAAGCTGGTCGGTGTTGCAAGATGTTTTAGATCTTGTTTG
ATATTGACAGAAAGAAAATTGCAGGGTCCTTGTTACAGCATAGCAGCATGCCATGTTTTCTTCCTCTTTTGCTCATTGTG
TTGTGTGCCGTTTCTTCCGCCAGAAATCCTAAATCTATGGGTATCCTTTGCTGCTCACTTGAATTCTAATCCGTC----T
TCACGTTCTTCATTTCTTAAAGCTGTGCTTATGTTTTTGAAAGGCTACAGAGGTTGCTTATTTTCAGGTTATTGTAGAAA
TCATATTATTCTGCTGGGTAAATCAGATCATCGTTATGTCATCTAAGGATGTCCTATCGCATTTCCTTTCTTATGTTTAA
GAATGAAGCAATATATA-AATAGCAGCTTGATGCCTTGATTAAGAAAAGAAGCCCCAAAGCCGAATACCCAGCATCTAAA
TTCTGCTCAACTGTAAGGGGATTATCATAACCCCAGGCACCAAACCGAATCTAAGTTGAATGAATTGTGGTCCTTATTCC
ACTAGCACTGGTACCAAGTTAAATGGAAAAGTATATCTGGGGTGTCTATTTGCAGTTGGAGGGAAGGTGTATCTGTTTTA
AATTCATAACGAAGCTAAATATACAAGATCACTTAACCAGAAGCAGCCTTAACTACTCA-AAAGCTAATTTGGTTCCAGG
CCATGGCATACTGTAGCGATCAGACCTCAAACAGTCTGATCTCTGTGCATCAGTGTCATCCCTGGATCGGTAATGCTGAC
ATGCACAG
>chr4B_1
ACAAGTCTGACAAGATCCTTCTGCTAATTGTGATGCTGTTGCTTTCAGATGGAAACTAATTGAAGGCCCCATCGAGTCGA
GTCCAGACCATGCATCATGTGCAAGGTTATGCACAATGATGGTGCTGAATAGCAAGGTGGACATGAGCATTAGCTAGCAG
AAGCTGGTAGGTAGTACAATCCAAAGCAAAGCACAAGCACAAGCACAAGCAGCAGCAGGTCGGTCGACCGATCGATCGAT
CATAAGAGAAAGTTAGCGTGCGTGCATGCATGCATGCATGCATCGGTGGAAATTATCATTCATGATGCACTGCATTCTTG
GGAATATTATGATTATGCTCATATCCTGGTCCATCCAGCTAATTATTTGCTATGCCGATGCATCAATTTCACCTACTC--
----------TTGTGTTTATCATTCATTCACTGGTCACTTGTAATTAGAGGTGTTGGCATGCATGTTTTGTTACCCTACC
CTTGGGATTTGTTTGTCTGGCCAAAGTCGAACTAGACACAGATGTGGGATTGTATGAAGTGAAATGTTAAAGCAAATGAA
GAATGGAATGGAAACAAACAAATGTAAGTTCTTCTGGAATGTGCAACAAGAGTCCAAGATGGGGGAAAGGGTAAAGCAAA
AGA----G----AAGAGGGACGGGGGCAAGAAAGGAAAAGTGAAAAAGAAAAGGAAAGGAAAGAGGTCGCCATCACTGCC
TCTGCCTGATGAGGTCTGTCTCTTTTGCCTGCTCAGCTCATCCCCTCTCCCAGTTGA-------GCTCAAACAGCAGCAC
CACTCTAGAACGCAACACCAACAGGAGGGGGGTAGGTTCTCCTCTCAATAGATACAAGAATACAACACAAGAGTCTTCCA
TTCCACTCCTCATCTTGTCTTTCTCCCACATCACAGCGTCGCAAGTTTCTTTCTTCTCT----------TCAGACAAAAA
CATCAGTCCTCCTCTTCTTAAGTAGGAATTCAGTTCGTCAATGCTGCTGCCTCCTTGCCCTTGCCCTTGCCCTTGCCCTT
GATAGATATAGATAGACGAGTGAAGTGAGTGAGCAGTGCGTGAGCGGGGATGGATCAGCCGGTGCCCTCCATCTGCGGCC
TCCACCCGGGCATCGCCGTCACCGGCTTCTGCTCCGCCTGCCTCCGCGAGCGGCTCGCCGGCCTCCACCCCAGCGACCCC
GCCGACTCGGCGGAGCTCCGCCGCTGCAAGTCCTTCTCCTACGCCCGCTCCGCCGCCGCCTACTTCGAGCCGCAGCGCCG
CTCCTGCGACGCCCGCGGCGCCGCCGCCCTCTTCCACCAAGAACCAACCTACCTCCCGGGAGAGGAGGAACATCTTCCAC
CATCAGCGGCGGGCAGGCCCATGAAAGACCACATCCACCATGAGTCCTCCTCCAAGAAGGCCGCCGGCACATTCGGGGGG
TTGGGCAAGAAATGGCAGGAATGGCGCCGCAAGAACAAGCTCAAGAAGCAGGAGCAGGGGCCCATCGCCAGCAGGGCCGC
CATGCCGCACGAGAATCTCCGGCACCGCAGCTTCCGCGACACGCGCTCCGAGGTCGCCGCCGACGCGCTCGGCCGGCGCT
CCGTCGATGTGGACACCCTTCTCTCCATGGACCCCGGCCGCATCTCGGTGGATGAGCCCCGAGCTTCTTGTGACGGCTAC
CACGGCGTACGGTTGCGCATTCCCCCGATGCTGTCCCTGGTGGAGGATGCGCCCGTCCCACGCTCTGATGGCCAAATCCC
TGTGGAGGAAGACGAGGACACTGAGCCCGGAGGCTGCGCCCAGACAAGGGACTACTACTTGGACTCCTCCAGCTCCAGCA
GGAGGCGCCGGAGCGTGGACCGCTCCTCCTTCTCCAGCCGCAAGTCATTCTCTGATGCCAGTGACCTGCCCAGGATGATG
GCTGGTGCCACTGCCAATGCCAATGCCCGGGTTTCACCGGCCATTGGTGCCGAGTTTTATCAGTACCACCACGCTCAGAG
TCAGAGTGTTCTTGACCATAACCAGCAGTGGGAGCAGGGACCGAATTCTTATTCTCTCCGGGATGATGATATGTCAGGGA
GCATTGATCCGGCGGCATTCCGGGATGGCATCCCTCTGCCGGCCAAGAAGTCTAAGAAGTGGATCAAGGGTTGGAACATC
TGGGGTCTCATACATAAGAAGAGCAGCACCAAGGAATCTGAAGCAGCCAATTTGGCCAACAGATCATTCTCGGAGAAGTG
GCCCGAGCTCCGCACAAGGGGATACAATGGTCAGATGCTCAGGTGCAACAGCAGCGTAAGCGCGAGGAGCTCCTTCGGCA
ATAGCGGAGCAGCAATGGGCGGCGTGAGCGGGAGGAGGAGCAATGTGGAAATGCATGTTAATGGCTTAGGGAGGATGAGG
AAGGATGAGGTTTTACTCGAGAGGAATTTCAGTGCAAGGTACACGCCTTGCACGGTTGATAATGGCGCGATCCCTTATCC
AATCAGAGGTGCCCAGTTCAATCGGCGAAATCAGAATGGGATGCCCGGGAAAGGAAGGCCTGCTCGTTCATCCAATTCTT
TGCCTCGTAGCTCACTTGGAATGTACTGATCTAGCAGTGATTAAGGCAGGTTTATGTTCTTCTACATCTTCTTATGTGCC
TTGGCTACAATGTGCATAGCTATGGTAGC----GTCATCGGAATCAACTTTTTATAGGCTCAGATCAGAAGAAAGGTTGT
CAAGTGAAGTGGTGATGGTGTTGGATTATATACCTTACTTAGTCTTATTTCCTACTGGGCTTGGGAGTGGAGTATAGCAT
TTAACTTTACACCCTTGTATAAGATATGCCATATGTATGTTTGCTTTTGTCAATTGAATTCAAGTTAGCACTCTGGCAAT
AGCAATAACATGATGTAGGGGCTATGGAATCGAATGCCGATAATCTGGTTAGTGTTGTAGGATGTTTTGGATCTTGTTTG
AGATTGACAGTAAGAAAATTGCAGGGTCCTTGTTACAGCATAGCAACATGCCATGTTTTCCTCCTCTGTTGCTCCTTGTG
--GTGTGCCGTTTCTTCCTCCAGAAATCCTAAATCTATGGGTATCTTTTGCTGCACACTTGA--TCTAATCCGTCACATT
TCACTTTCTTCATTTCTT-AAGCTGTGCTTATGTTTTTGAAACACTACAGAGGTTGCTTATTTTCAGGTTATTGTAAAAA
TCATATTATTCTGCTGGGTAAATCAGATCATTGTTATGTCATCTAATGATGCCCCATCGCATTTCCTTTCATGTTTCA--
----GAAGCAATATATACAATAGCAGCTTGATGCCTTGATTAAGAAAAGAAGCCCCAAAG-CGAATACCCAGCATCTAAA
TTCTGCTCAACCGTAAGGGGGTCATCATAACCCCAGGCACCAAACCGAATCTAAGTTGAATAGATTGTGGTCCTTATTCC
ACAAGCACTGGTGCTAAGTTAAATGAAAAGGTATATCTGGGGTGTCTATTTGCAGTTGGAGGGAAAGTGTATATGTTTCA
AATTCGTAACGAAGCTAAATATACAAGATCAATTAACCAGAAGCA-----------------------------------
--------------------------------------------------------------------------------
--------
>chr4A_1
ACAAGTCTGACAAGATCCTTGTGCTAATTGTGGCGCTGTTGCTTTCAGATTGAAACTAATTGAAGGCCCCAACCAGTCGA
GTCCAGACCATGCATCCTGTGCAAGCTTATGCACAATGATGGTGCTGAATAGCAAGGTGGACATGAGCATTAGCTAGCAG
AAGCTGGTAGGTATTACAATCCAAGGCA------AAGCACAAGCACAAGCGGCAGCAGGTCGGTCGACCGA----TCGAT
CATAAGAGAAAGTTAGCGTGCGTGCATGCATGCATT--------GGTGGAAATTATCATTCATGATGCACTGCATTCTTG
GGAATATTATGATTATGCTCATATCCTGGTCCATCCAGCTAATTATTTGCTATGCCGATGCATCAATTTCACCCACTCCT
ACTACTGCTCTTGTGTTTATCATCCATTCACTGGTCACTTGTAATTAGAGGTGTTGGCATGCATGTTTTGTTACCCTGCC
CTTGGGATTTGTTTGTCTGGCCAAAATGGAACTAGACACAGATGTGGGAATGCATGAAGTGAAATGTTAAAGCAAATGAA
GAATGGAA-----ACAAACAAATGTGAGTTGTTCTGGAATGTGCAACAAGAGTCCAAGATGGGGGAAAGGGTAAAGCAAA
AGA----GGGAGAAGAGGGACAGGGGCAAGAAAGGAAAAGTGAAAAAGAAAAGGAAGGGAAAGAGGTCGCCATCACTGCC
TCTGCCTGATGAGGTCTGTCTCTTTTGCCTGCTCAGCTCATCCCCTCTCCCAGCTGAGCTGAGGGCTCAAACAGCAGTAG
AGAACA---------------------------------------CAATAGATACAAGAATACAACACAAGAGTCTTCCA
TTCCACTCCTCATCTTGTCTTTCTCCCACATCACAACATCACAAGTTTCTTTCTTCTCTTCTCTTCTCTTCAGACAAGAA
CATCAGCCCG--TCTTCTTAAGTAGGAATTCAGTTCGCCAATGGTGCTGCCTCCTTGCCCTCTCCCTTG-----------
-ATAGATATAGACAGACGAGTGAAGTGAGTGAGCAGTGCGTGAGTGGGGATGGATCAGCCGGTGCCCTCCATCTGCGGCC
TCCACCCGGGCATCGCCGTCACCGGCTTCTGCTCCGCCTGCCTCCGCGAGCGGCTCGCCGGCCTCCACCCCAGCGACCCC
GCCGACTCGGCGGAGCTCCGCCGCTGCAAGTCCTTCTCCTACGCCCGCTCCGCCGCCGCCTACTTCGAGCCGCAGCGCCG
CTCCTGCGACGCCCGCGGCGCCGCCGCCCTCTTCCACCAAGAGACAACCTACCTCCCGGGGGAGGAGGAACATCTTCCGC
CAACAGCGGCGGGCAGGCCGATGAAAGACCACATCCACCAAGAGTCCTCCTCCAAGAAGACCGCCGGCACATTCGGGGGG
TTGGGCAAGAAATGGCAGGAATGGCGCCGCAAGAGCAAGCTCAAGAAGCAGGAGCAGGGGCCCATCGCCAGCAGGGCCGC
CATGCCGCACGAGAATCTCCGCCACCGCAGCTTCCGCGACACGCGCTCCGAGGTCGCCGTCGACGCGCTCGGCCGGCGCT
CCATCGATGTGGACACCCTTCTCTCGATGGACGCCGGCCGCATCTCGGTGGATGAGCCCCGAGCTTCTTGTGACGGCTAC
CACGGCGTACGGTTGCGCATTCCCCCGATGCTGTCCCTGGTCGAGGATGCGCCCGTCCCACGCTCTGATGGCCAAATCCC
CGTGGAGGAAGACGAGGACACTGAGCCCGGCGGCTGCGCCCAGACAAGGGACTACTACTTGGACTCCTCCAGCTCCAGCA
GGAGGCGCCGGAGCGTGGACCGCTCCTCCTTCTCCAGCCGCAAGTCATTCTCTGATGCCAGTGACCTGCCCAGGATGATG
GCCGGTGCCACTGCCAATGCCAATGCCCGGGTTTCACCGGCCATTGGTGCCGAGTTCTATCAGTACCACCACGCTCAGAG
TCAGAGTGTTCTTGACCATCATCAGCAGTGGGAGCAGGGACCGAATTCTTATTCTCTCCGGGATGATGATATGTCAGGGA
GCATTGATCCCGCGGCATTCCGGGATGGCATCCCTCTGCCGGCCAAGAAGTCTAAGAAGTGGATCAAGGGGTGGAACATC
TTTGGTCTCATACATAAGAAGAGCAGCACCAAGGAATCTGAAGCTGCCAGTTTGGCCAACAGATCATTCTCGGAGAAGTG
GCCCGAGCTCCGCGCAAGGGGATACAATGGGCAGATGCTCAGGTGCAACAGCAGCGTAAGCGCGAGGAGCTCCTTCGGTA
ATAGTGGTGCAGCAATGGGCGGCATGAGCGGGAGGAGGAGCAATGTGGAAATGCATGTTAATGGCTTAGGGAGGATGAGA
AAGGATGAGGTTTTACTCGAGAGGAATTTCAGTGCAAGGTACACGCCTTGCACGGTCGATAATGGCGCGATCCCTTATCC
AATCGGAGGTGCCCAATTCAGCCGGCGAAATCAGAATGGGATGCCCGGGAAAGGAAGGCCTGCTCGTTCATCCAATTCTT
TGCCTCGTAGCTCGCTCGGGATGTACTGATCTAGCAGTGATGAAGGCAGGTTTATGTTCTTCTCCACCATCTTATGTGCC
TTGGCTACAATGTGCATATCTATGGTAGCTAGCATCATCAGAATCAACTTTTTATAGGCTCAGATCAGAAGAAAGGTCGT
CAAGTGAAGTGGTGATGGTGTTGGATTATATACCTTACTTAGTTTTATTTCCTACTGGGCTTGGGAGTGGAGTATAGCAT
TTAACTTTACACCCTTGTATAAGATATGCCATATGTATGTTTGCTTTTGTCAATTGAATTCAAGTTAGCATTCTGGCAAT
AGCAATAACATGATGTAAGGGCTATGGAATCGAATGCCGGTAAGCTGGTCGGTGTTGCAAGATGTTTTGGATCTTGTTTG
ATATTGACAGCAAGAAAATTGCAGGGTCGTTGTCACAGCATAGCAGCATGCCAGGTTTTCTTCCTCTTTTGTTCATTGTG
TTGTGTGCCGTTTCTTCCACCAGAAATCCTAAATCTATGGGTATCTTTTGCTGCTCACTTGAATTCTAATCCGTC----T
TCACGTTCTTCATTTCTTAAGCC-GTGCTTATGTTTTTGAAAGGCTACAGAGGTTGC-TATTTTCAGGTTATTGTAAAAA
TCATATTACTCTGCTGGGTAAATCAGATCATCGTTATGTCATCTAAGGATGTCCTATCGCATTTCCTTTCTTATGTTTCA
GAATGAAGCAATATGTA-AATAGCAGCTTGATGCCTTGATTAAGAAAAGAAGCCCCAAAGCCGAATACCCAGCATCTAAA
TTCTGCTCAGCCGTAAGGGGATTATCATAACCCCAGGCACCATACCGAATCTAAGTTGAATGGATTGTGGTCCTTATTCC
A-----------------------------------CTGGGGTGTCTATTTGCAGTTGGAGGGGAGCTGTATCTGTTTCA
AATTCATAACGAAGGTAAATATACAAGATCACTTAACCAGAAGCAGCCTTAACTACTCAGAAAGTTAATTTGATTCCAGG
CCATGGCATAC---------------------------------------------------------------------
--------
>SNPs
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
---SSSS-------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-----------S-----------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
-S------------------S-----------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
------------------------------------------------------------------S---S---------
--------------------------------------------------------------------------------
---------------S---S------------------------------------------------------------
-------S------------------------------------------------------------------------
---------------------S----------------------------------------------------------
-------------------------S------------------------------------------------------
-----------------------------------------------------------------------S--------
------------------------------------------S------------------S------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
------S--------------------------------------------------------S----------------
------------------------------------S-------------------------------------------
---------------------S-------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------S-----------
----------S---------------------------------------------------------------------
------------------S--------------------------S----------------------------------
----------------------------------------------------------------------------S---
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
-----------S--------------------------------------------------S-----------------
--S---------S-S----------S---S------------------------------------------------S-
----------------------------------------------------------------S-------S-------
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_779
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATCCCCTCTCCCAGTTGAGT---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>reverse_2316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------TGGCA
ATAGTGGTGCAGCAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>forward_1620
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CCATCGATGTGGACAGCCTC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_2460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CAATGGCGCGATCCCTTATC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>forward_1782
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TGGAGGAAGACGAGGACACC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_3651
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------CAGTGTCATCCCTGGATCGG----------
--------
