>input_sequence_46439
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GGACTTGGGCCCAGCCCAAGTGA-----------AGATGGCTCCAGGGAAACGAG------GCAAGGGCAAGGGTGGCCC
GGCGCCGGCGGCCGCGGCCGCGGCGAGCGCCGCTGCCGGCGGCGAGGAGTTCCCGGGCTGCCTCCGCCTGATGCCGCCGT
CCACCGTCGCCATCTCCGTCCACGCCAAGCCCGGCTCCAAGATGGCCACCATCACCGGTCCGTACTCCG----CCCCCTC
TAGTCCTCGGCCTCGCTGCTCCCCTCCTAAGTCCTGAGCTAA------TTTGCAGAGATCGGGGAGGAGGCCGTCGGGGT
GCAGATCGACGCGCCGGCGAGGGACGGGGAGGCCAACGCCGCCCTCGTCGACTTCATCAGCTCGGTAATTTAGTGATTCC
CTCCCCGCT------GATACAGT-------------ACCGC-TTGATCTAGATGAACTGCCCACCAAGATGATGAT----
TGGTAGTTCCATGGTATTGCTGTGAACTAG---CTTGAAAAAGGTTTAGGAGAGTCGGCAGCCGGCTCTGGTTTGGGAAT
TAGGAGCACGAGCTAGGG-----ACATACTAGTATGATTTGTTTTAACT----------TTCATTGTTACAAACTGATGG
CATGAGATCTTCTCCATCGAAGTTCAGACTTTAAACATGTTAGAAAGTACTATTGATG-AAGCATATGAAACAAGTAGTA
----------CTGAACAGACCGTCGAGGACATGGATTGGCGAAGTTGTTT-GCCATGGAGATGTGTGGTGTTCTTTC---
TTGAATTTCGAATTTCA-TATTTTTCCCCTGGAGCACTGCAATCTAGCAGGACATTTTAGCCTCG------GTCTTACTG
CACCTGCCATCTTTGCTTCTTTGGCCATTCTGCTTCAGACTTGGCTACCTTTGGTGT--------GTTCAATAGGAGGAA
GATAGCATCGAAGTTCAGTGAGTTTGATAATTGG----GTATGATTCTGTCAAGGGTGCATTTCAAGGATTTGAACATTG
GTTGATCTAAGACCGCA--------------------------------------AATTAAGTGGCTGTTTGCGCCTAAC
TGCCAATGACACCCAGGGGGTTTGTTGCTACTGAGCAGGTAGTTACAGTCCATAATCCTACTTGCGCTATGGCCTTAGTA
TCTTGTTTAATATCCTATTGACCGCATTAATTCATTGTCAAACTACAATTCAAGGAGACAAATCCATGGACAAATA-TGT
CAGCTGT-TCTTTGGATAGTGCCTTATTGGTTGCTGATTGAGACAATA----GGTGCATTTTCCTATGTTTAGCTCATCA
ATCAAGAGGGAGTAAACAAACTGCTGTGCTTGTGCTGGAAGTACATTCACTGGTTTAACATGATATTCTAATACTCCCTC
CGTTCACAAATATAAGATGTTTTGGACTACGTTCGGACTGAAATGAGTGAACAAACACACTAAAATGTGTCTATATACAT
CATATTCACAAAAAGCTAGAACATCTTGTATTTGTGAATGGAGGGAGTAGTACAGATGAAGTCGATCTATTAAACATTTG
ATGCTTGATTT-CTTTGCTCCATCTGAAAACCTTG--------TGTAAATGTG-----CATGCATGCAGGTACTCGGGGT
GAAGAAAAGAGAGGTGTCTATTGGCTCCGGTTCGAAATCGAGGGAGAAGGTTGTGCTAGTGCAGGACGTGACACTCAAAG
GCGTCTTTGAGGCCTTGAAGAAGGCGTGCGGCCCTTGA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr2A_1_TraesCS2A01G577700
GGGACGGAGGGAGTAGATCATATAGTTAACTAGCTACCTAAAGTACGAAAGGCAGAGTTTTGAGTAGTAGCACTAGAAAA
ACAGGACAATGATGTTAGTACTAATCGAAACAAAGAAGTTAATCCACTACCAGTACAGATTAAGCCGGGACGCAGGACAC
ACTCTGATGCCTTTGATACATGGCCTCAGATGCAACTTAAGCCAAATAGCTATCTGAAGTATGAACTGCAGTGTTGTCCA
ACTAAAACGGCATGTTGATATACCTGCGGTAACACGGTGGCTGGCCGCAGATTGGCAAACACGCCAAGCCCGGCACGGAT
GTTGAGCAGCCCGGTCTCGGGCTTGAGATGCTTCTCATTGTTATCCCACTTATACCTGCAGATCAAAACATCA-AACCC-
--AATTACTGAAAGAAAA---CGCAGG---TGCACATCACAAAGTCTGACCAGAGCAAAATGCAATCCGGAGCTGTCAGC
AGTGATGTTGCTGCTGTCAACAGAAAAATTCCACTCACCCTCCAATCGCGCCGAGGAGGATGGCGTCCGAGGCCCGCGCC
GCCGCGAGCGTCTCGTCGGGGAGCGGCACGCCAGCCGCGTCCAGCGCCGCGCCGCCCATCAGCATCTCCTGGAAGCGGAG
CTCGACGCCTGCAAAGAAAGGAAAACAAA--CAGG---CTA-----------TGATCGTCGGCACAACGCCAGTGCTCGG
AGCTGGAGGCGTTGAAGAACGGGGAGCTAAGGTGAGCTTGCCTTCCTTGGAGCCGGCGACGGAGAGGACGTCCTTGGCGA
CGGCGACGACCTCGGGGCCGATGCCGTCGCCGGGGAGGAGCGTAATGCTGTAACTCCTGGCCGCGGCGGAGCACCGCACG
GAGCCCGCCAT------CGGCCGCGCCGCCGCGCCGGCGCCCCGCCGGCGG---GAGAGGGCTAGGGTTCTGAGCGGCGT
GGCTTGGAGCTGAGTCATCATCGTGCTGTGC---TGAGCCTGGCCGTCCCCTGGGCCTCCACGGGATATATTGTGCGGAT
GGACTTGGGCCCAGCCCAAGTGA-----------AGATGGCTCCAGGGAAACGAG------GCAAGGGCAAGGGTGGCCC
GGCGCCGGCGGCCGCGGCCGCGGCGAGCGCCGCTGCCGGCGGCGAGGAGTTCCCGGGCTGCCTCCGCCTGATGCCGCCGT
CCACCGTCGCCATCTCCGTCCACGCCAAGCCCGGCTCCAAGATGGCCACCATCACCGGTCCGTACTCCG----CCCCCTC
TAGTCCTCGGCCTCGCTGCTCCCCTCCTAAGTCCTGAGCTAA------TTTGCAGAGATCGGGGAGGAGGCCGTCGGGGT
GCAGATCGACGCGCCGGCGAGGGACGGGGAGGCCAACGCCGCCCTCGTCGACTTCATCAGCTCGGTAATTTAGTGATTCC
CTCCCCGCT------GATACAGT-------------ACCGC-TTGATCTAGATGAACTGCCCACCAAGATGATGAT----
TGGTAGTTCCATGGTATTGCTGTGAACTAG---CTTGAAAAAGGTTTAGGAGAGTCGGCAGCCGGCTCTGGTTTGGGAAT
TAGGAGCACGAGCTAGGG-----ACATACTAGTATGATTTGTTTTAACT----------TTCATTGTTACAAACTGATGG
CATGAGATCTTCTCCATCGAAGTTCAGACTTTAAACATGTTAGAAAGTACTATTGATG-AAGCATATGAAACAAGTAGTA
----------CTGAACAGACCGTCGAGGACATGGATTGGCGAAGTTGTTT-GCCATGGAGATGTGTGGTGTTCTTTC---
TTGAATTTCGAATTTCA-TATTTTTCCCCTGGAGCACTGCAATCTAGCAGGACATTTTAGCCTCG------GTCTTACTG
CACCTGCCATCTTTGCTTCTTTGGCCATTCTGCTTCAGACTTGGCTACCTTTGGTGT--------GTTCAATAGGAGGAA
GATAGCATCGAAGTTCAGTGAGTTTGATAATTGG----GTATGATTCTGTCAAGGGTGCATTTCAAGGATTTGAACATTG
GTTGATCTAAGACCGCA--------------------------------------AATTAAGTGGCTGTTTGCGCCTAAC
TGCCAATGACACCCAGGGGGTTTGTTGCTACTGAGCAGGTAGTTACAGTCCATAATCCTACTTGCGCTATGGCCTTAGTA
TCTTGTTTAATATCCTATTGACCGCATTAATTCATTGTCAAACTACAATTCAAGGAGACAAATCCATGGACAAATA-TGT
CAGCTGT-TCTTTGGATAGTGCCTTATTGGTTGCTGATTGAGACAATA----GGTGCATTTTCCTATGTTTAGCTCATCA
ATCAAGAGGGAGTAAACAAACTGCTGTGCTTGTGCTGGAAGTACATTCACTGGTTTAACATGATATTCTAATACTCCCTC
CGTTCACAAATATAAGATGTTTTGGACTACGTTCGGACTGAAATGAGTGAACAAACACACTAAAATGTGTCTATATACAT
CATATTCACAAAAAGCTAGAACATCTTGTATTTGTGAATGGAGGGAGTAGTACAGATGAAGTCGATCTATTAAACATTTG
ATGCTTGATTT-CTTTGCTCCATCTGAAAACCTTG--------TGTAAATGTG-----CATGCATGCAGGTACTCGGGGT
GAAGAAAAGAGAGGTGTCTATTGGCTCCGGTTCGAAATCGAGGGAGAAGGTTGTGCTAGTGCAGGACGTGACACTCAAAG
GCGTCTTTGAGGCCTTGAAGAAGGCGTGCGGCCCTTGATGATGTATGTTGTTAACCGCGAG----TAATATAACTTGGCT
GAGCAGAGTGTATCAGCTG----AACCAGCGGTCTTTCTCCGGTATAAATCGTGGTGAGAT---------T---GAACCC
CGTAAAAAGGCTGAAATCTTGGACACGGCCAGTCTTGT---CCCTGAGACCGTGACGGGGAACTGCTCT-TTTTCTGAAT
CAGAAGAAAGAGTAACTGAGGTGTATGTATAGTTTGCATGGATAGGCCGAGCCTCTGTATCTCTGCTTGACATATGCTGT
TCTGAGTCCGAAAGTGCAATCAATGCAAATCCTGAAACAAGTCTATCGACT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ATCA
GAAATCCTGAAAACCTTGTGTGAACATGAACGCATGCAGGTACTTGGAGTGAAGAAAAGAGAAGTGTCTATCGACTATCG
GTTCCGACCCCAAATCAAGGGAGAAGGTTGCGCTGGTGCATGATGCGACGCTCCAGGGCATATTCGACGCCTTGAAGAAG
GCGTGCAGTGCTTCCTGATGCGTGTTTGTAAACTAGTTTCAAGGCGTGCTTTTAAACTAGTTTTGAACAGTAACAGCTGA
AACGGAAACAATCAGCCTATCAGGGTTTCACAGGGATTTTTGAAAATAGAAGTAAATAGCATATTAAGGGCCTGTTCGGT
AACTCCCTGGCTCTAGGAAATCGTCAAATCCAGCTTTTGTTTTCGATCGCCAGCTTCTTCCACGAATCGGGATCGATGGA
AAACTGTTCGGCTCGATCACTTCGGCTTCTCGTCACGCTAGCAGGCCGGCCTGCCTGAGCGGGCTAGAGCCCAGTCGGCT
CAACAGGTAGGATCGGTGTGAAACGGGACGAGAGAGGATGGGCTTGGCCCAGATCGGAGGGAAACATAACGAACCGGTAC
GTGAGGCACTTCGCGGTGGCATCCGATTGTAAATAACGCTAACTCTAGGAATCCAGCTTCTGGGATCGACAAAACTGCGG
CTCCAAGTTTTTGTACGTCGATGTTGCTTCGATCTGGGAAGCCAGCT
>chr2B_128
TACT----------------------------------------------------------------------------
---------------------------------------------------AGTACAGATTAAGCCGGGATGCAGGACAC
ACTCTGATGCCTGTGATACATGGCCTCAGATGCAACATAAGCCAAATAGCTATGTAAAGTACAAACTGCAGTCTTGTCGA
ACTAAAACAGCATGTTGATATACCTGCGGTAACACGGTGGCTGGCCGCAGATTGGCAAACACGCCGAGCCCGGCACGGAT
GTTGAGCAGCCCGGTCTCGGGCTTGAGATGCTTCTCATTGTTATCCCACTTATACCTGCAGACCAAATCATCA-CATCCA
ATTATTACTGAAAGAAAA---CGCAGG---TGCACATCACAAAGTCTGACCAGAGCAAAATGGAATCTGGAGATGTCAGC
AATGGTGTTGCTACTGTCAACAGAAAATTTGCACTCACCCTCCAATCGCGCCGAGGAGGATGGCGTCCGAGGCCCGCGCC
GCCGCGAGCGTCTCGTCGGGGAGCGGCACGCCGGCCGCGTCCAGCGCCGCGCCGCCCATCAGCATCTCCTGATACCGGAG
CTCGACGCCTGCGACGCAAGGAAAACAAA--CAGATTACCA-----------TCATCGTCGTCACCCTGCTAGTGCTAGT
GCCATTGGGCGCCGCGGAGCC--GAGTTCAGGCGAGCCTACCTTCCTTGGAGCCGGCGACGGAGAGGACGTCCTTGGCGA
CGGCGACGACCTCGGGGCCGATGCCGTCGCCGGGGAGGAGCGTAATGCTGTAGCTCCTGGCCGCGGCGGAGCACCGCACG
GAGCCCGCCGT------CGGCCGCGCCGCCGCGCCGGCGCCCCGCCGGCGGCGGGAGAGGGCTAGGGTTCTGAGCGGCGT
GGCTTGGAGCTGAGCCGTCATCGTGCTGGGTGGGGGAGCCTGGCCGTCTCCTGGGCCTCCACGGGATATATTGTGCCGAT
GGACTCGGGCCCGGCCCAAGTGGAGACCCGGAGGAGATGGCTCCAGGGAAGAAGCGAGGCAGCAAGGCCAAGGGGGCCCC
GGCGCCGGCGGCGGCGAGCGGCGGT------GCCGCCGGCGGAGGGGAGTTCCCGGGGTGCCTCCGCCTGATGCCGCCGT
CCACCGTCGCCATCTCCGTCCACGCCAAGCCCGGCTCCAAGATGGCCACCATCACCGGTCCGTGCTCCCCGTCCCCCACC
TAGTCGTCGTCCTCGCTGCTCCCCTCCTAATTCGTGAGCTGA------TTTGCAGAGATCGGGGAGGAGGCCGTCGGTGT
GCAGATCGACGCGCCGGCCAGGGACGGCGAGGCCAACGCCGCCCTCGTCGACTTCATCAGCTCGGTAATCTAGCGATCCC
CTCCCTGCG------GATACACAGCAGCAGCGCACTATTCCTTTGATTTAGACGAACTGCCCACCTAGATGATGATGAAT
TGCTAGTTCCATTGTACTGCGCGC-ACTAG---ATTGAAGAAGGT-----------------CGGCACTGGTTTGGGAAT
CAGGAGCACAAGCTAGGGACCAGACATACTAGTATGATTTGTTTTAACT----------TCCATTGTTACAAA-------
---------------------GTTCAGATTTAAAGCATGTTAGAAAGTGTTGTTGAAGCAAGCATATGACACAAGTACGT
AGTACTGAACCTGAACAGGCCGTCGAGGACATGGTTGGGCGAAGCTTGCGCGCCTTGGAGATGTGTGGTGATGTTCTTTG
TTGAATTTTGAATTTCA-TTGTTTTCCCCTGGAGCACTGCAGTCTAGGAGGACGTTTTAGCCTCG------GTGTTACTG
CACCTGCCAGCTTTGCTTCTGTGGCCATTCTGCTTCAGACTTGGCCGCC-TAGTTTAGTTAGGGCGTTCACTAGGAGGAA
GATAGCACCAAGGTTCAGTGAGTTTGATGCCTGTGTCTGTATGATTCTGTCAAGGG--CAATCCAAGGATTTGAACTGTG
ATTGTTCTGAGGCCACAAATAACTCCGGTTCTTAATTTTACCAGAAAATCTACAGAATTAAGAGGCTGTTTGCACCTAAC
TGCCAATATCAACCAGGGG-TTTGTTGCTGCTGAGCAGATAGTTACAGTCCATAATCCTACTTGCACTATGGT-TTAGTA
TCTTGTCTTATCTCCTACGGACCACATAAAGTCGCTGTCAAACTACAATTCAAGGGGTTGGATTCATGGACAAAAA-TGG
CAGCTGTATCTTTGGGTAGTGCCTTATGGGTTGCTGATTGAGACAATATATAGGTGCATTTTCCAATGTTTAGCTCATTA
TAATCA--AGACAATAGGCGCCTTA-----TGTGCTGGAAGTATATTCACTGGTTTGACATGATAGTCTAACG-------
--------------------------------------------------------------------------------
-------------------------------------------------GTACAGATGAAGTCACTC---------TTTG
ATGCTTCATTTGCTTTGCTCCATCTGAAATCCTGAGAGCCTTCCGTAAATGCGCATC-CATGAATGCAGGTGCTTGGGGT
GAAGAAAAGAGAGGTGTCCATCGGCTCCGGCTCGAAATCGAGGGAGAAGGTCGTGCTAGTGCAGGATGCGACACTCAAAG
GCGTCTTGGAGGCCTTGAACAAGGCGTGCGGCCCTTGATGATGTATGTTAACTGCGAGTATGTAATAGTATAACCTGGCT
GAGCAGAGTGTATCAGCTGTAGGAACCGGTGCTCTTTCTCCCGTATAAATCGTCACCATGCCGGTGAGAACGAGGAACCT
GGT-AAAAGGCTGAAACCATGGGCACGGCCAGTCTTGTTGTCACTGAGATCGTCATGGGGAACTGCTCTTTTCT------
--GAAGAAAATGTAACGGAGATGTATGTATAGT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr2D_128
TACT----------------------------------------------------------------------------
---------------------------------------------------AGTACAGATTATGCCCGGATGCAGGACAC
ACTCTGATGCCTTTGACACATGGCCTCAGATGCAAGTTAAGCCAAATAGCA--------------------TGTTGTCAA
ACTAAAATGGCATGTTGATGTACCTGCGGTAACACGGTGGCTGGCCGCAGATTGGCAAACACGCCGAGCCCAGCACGGAT
GTTGAGCAGCCCAGTCTCGGGCTTGAGATGCTTCTCATTGTTATCCCATTTATACCTGCA-ACAACAGCATCA-CATCC-
--TATTACTGAAAGAAAAAAT-GCAGG---TGCAAATCACAAAGTCTGACCAGAGCAAAATGCAATCCGGAGCTGTCACA
AGTGATGTTTCTGCTGTCAACAGAAAATTTGCACTCACCCTCCAATCGCGCCGAGGAGGATGGCGTCCGAGGCCCGCGCC
GCCGCGAGCGTCTCGTCGGGGAGCGGCACGCCGGCCGCGTCCAGCGCCGCGCCGCCCATCAGCATCTCCCGGAACCGGAG
CTCCACGCCTGCGA-GCAAGGAAAACAAA--CGGG---TCA-----------TCGTCG----CACCCTGCTAGTACTCAA
AGCTC----------------GGGAGTTCAGGCGAGCCTACCTTCCTTGGAGCCGGCGACGGAGAGGACGTCCTTGGCGA
CGGCGACGACCTCGGGGCCGATGCCGTCGCCGGGGAGGAGCGTAATGCTGTAGCTCCTGGCCGCGGCGGAGCACCGGACG
GAGCCCGCCGTA------GGCCGCGCCGCCGCGCCGGCGCCCCGCCGGCGG---GAGAGGGCTAGGGTTCTGAGCGGCGT
GGCTTGGAGCTGAGCCATCGTGC-------TGGGTGAGCCTGGCCGTCTCCTGGGCCTCCACGGGATATATTGTGCCGAT
GGACTCGGGCCCGGCCCAAGTGAAGACCCAGAGGAGATGGCTCCAGGGA---AGCGAGGCAGCAAGGCCAAGGGGGCCCC
GGCGCCGGCGGCCGCGGCCGCGGCGGG------CGCCGCCGGCGGGGAGTTCCCGGGTTGCCTCCGCCTGATGCCGCCGT
CCACCGTCGCCATCTCCGTCCACGCCAAGCCCGGCTCCAAGATGGCCACCATCACCGGTCTGTACTCCGTCT---CCCCC
TAGTCCTCGTCGGACCCGCCTGCTCTCTGACGCTAACCTGCTGGGGATTTTGCAGAGATCGGGGAGGAGGCCGTCGGGGT
GCAGATTGACGCGCCGGCCAGGGACGGGGAGGCCAACGCCGCCCTCGTCGACTTCATCAGCTCGGTAATTTAGCGCTTCC
CTCCCTGTACCTGTAGATACACAGTGGTACTTCACCACTGC-TTGATCTAGACGAACTGCCCGCCTAGATGATGGT----
TGTTAGTTCCATGGTATAGCTGTGTACTAGTAGATTGAAGATGGTTTAAGCTTG--------------------------
-------------------------------GTATGATTTGCTTTGATTCCTGATGCACTTCACTGTTGCAAACTGATGA
CCTGAGATCTTCTCCATGAAAGTTTGGACTTTTAGCCTCGTGTGTTTTTTCGTGAATTTTGCACATGTGTGATGACCTGA
GATCTTCACTG-------------------------------------------TTGCACATGTGTGATGTTCTTTC---
GTGAATTTTGAAAATCCTTTTTTTTTTCCTGGATCATTGCAATCGAGTAGGTCATTTAACATTTTAGCCTCGTGTTACTG
CAGCTGCCAGTTTTGCTTCTTTGGCCATTATGTTTCAGACTTGGCCACCTTAGTTTTGTTGGGGTGTTCACTGGGAGGAA
GATAGCATCCAAGTTCACTGAGTTTGATACCTGTATC---ATGATTCTGTCAAGGG--CAATCCAAGGATTTGAACTGTG
ATTGTTCTGAGACCACAAATAACTCCGGTTCTTTCTTTTACCAGAGAATCTGCAGAATTCAGTGGCTGTTTGCGCCTAAC
TGCCAATATCACCCAGGGG-TTTGTTGCTGCTGAGCAGATAGTTACAGTCCATAATCCTACTTGCACTATGGT-TTAGTG
TCTTGTTTTATCTCCTACGGACCACATAAAGTCGCTGTCAAACTACAATTCAAGGGGCTGAATTCATGGACAAAAAATGG
CAGCTGTATCTTTGGGTAGTGCCTTATGGGTTGCTGATTGAGACAATATATAGGTGCATTTTCCAATGTTTAGCTCATTA
ATCAAGAGAGACAATAGGCGCCTTA-----TTTGCTGGAAGTATATTCACTGGTTTGAGATGATAATCTGATG-------
--------------------------------------------------------------------------------
-------------------------------------------------GTACAGATGAAGCCACTC---------TTTG
ATGCTTCATTTTCTTTGCTCCGTCTAAAATGCTGAAAACCTTCTGTAAATGTGCACTGCATGAATGCAGGTGCTTGGGGT
GAAGAAAAGAGAGGTGTCCATCGGCTCTGGCTCGAAATCGAGGGAGAAGGTCGTGCTAGTGCAGGACGCGACACTCAAAG
GCGTCTTCGAGGCCTTGAAGAAGGCGTGTGGCCCTTGATGATGTATGTTAACTGTGAGTATGTAATA---TAACCTGGCT
GAGCAGAGTGTATCAGCTGTAGGAACCGGTGCTCTTTCTCCCGTATAAATCGCCGCCATACGCGCGACGGT---GAACCC
CGT-AAAAGGCTGAAACCATGGTAATGGCCAGTC---TTGTCCCTGAGATGGTGACGGGGAACTGCTCTTTTTTCTGAAT
CAGAAGAAAGAGTAACTGAGGTGTATGTATGGTTTGCATCGACAGGCTGAGCCTCTGTATCGCTGTTTGACATTTGCTGT
TGTGCGTCAGATGGTGCAATTAGCAGCCATGGGTGTGTTATGCGTTGTTTAAAAACACATGTGCCTTTATATGTTGTTCA
AGCATGAGAAATAAGCAGTCCTGAACTGACTGTCGAAGATGTGGATCGGCGAGTCTTGATCAACTTGGAGATGTGTGATA
TTCTTCGGTTTCATATCTCTTTTTTTTTTCTTCACTTTCTGAAGCATTGCAATTCAGTATTAGGATTAGGACGTTTCAGC
CTCAGTGTTACTTGACCTGTCAATTTTGCTTTTTCTGGCCATTCTGCTTCAAACTATGGCCACCTTGGTTGCTCCCATCT
GAAATCCTGAAAACCTTGTGTAAACG--------TGCAGGTACTTGGAGTGAAGAAAAGAGAAGCGTGTATCGGTTCGAG
CTCTAAATTG-------AGGGAGAAGGTTGTGCTGGTGCAGGACGCGACGCTCGAGGGTGTTTTCGACGC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr1B_257
GATATAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CCTGCGGCAACACCGTGGCTGGCCGCAGATTGGCGAACACGCCGAGCCCGGCACGGAT
GTTGAGCAGCCCGGTCTCAGGCTTGAGATGCTTCTCATTGCTGTCCCACTTATACCTGCA-AGCGCAACATCAGCGTCC-
--ATTTACTGAAACTGAAAGTCACAGA---TGCACACCACAACTTCTGAACTAATTACTATTGCCAGATC----------
--------------------------ATTTCCACTCACCCTCCTATCGCGCCGAGAAGGATGGCGTCGGAGGCCCGCGCC
GCCGCGAGCGTCTCGTCGGGGAGCGACACCCCGACGGCGTCCAGCGCCGCGCCACCCATCAGCATCTCCCGGAAGCGGAG
CTCCACGCCTGCAGCCGCAAGCAAACAAT--GGGG---TCA-----------GCCATCTAGCTTAGCTTCTAGCACTCGG
AGCTCAAAGTCATGGACGGCGTAGGGTTCGGCTAAGCTTGCCTTCCTTGGCGCCGGCGGCGGAGAGGACGTCCTTGGCGA
CGCCGACCACCTCCGGCCCGATGCCGTCGCCCGGGAGGAGCGTAATGTTGTAGCTCCAGGCCGCGGCCGAGCGCCG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chrUn_257
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GATATACCTGCGGCAACACGGTGGCTGGGCGCAGATTGGCAAACACACCGAGCCCGGCACGGAT
GTTGAGCAGCCCGGTCTCGGGCTTGAGATGCTTCTCATTGTTATCCCACCTATACCTGCA-ACCGCAGCATCAACATCCA
--ATTTACTGAAACTCAAAGTCACAGAAGATGCACATGACGACTTCTGAATTAATTACTGCTGCCAGATGG---------
---------------------------TTTCCACTCACCCTCCTATCGCGCCGAGCAGGACGGCGTCGGAGGCCCGCGCC
GCCGCCAGCGTCTCGTCGGGGAGCGGCACCCCGACGGCGTCCAGCGCCGCGCCGCCCATCAGCATCTCCCGGAACCGGAG
CTCCACGCCTGCGGCCGCAAGCAAACAAATTGGGG---TCACCTGTCGCCCTGCCAGCTAGCACTAG---------TCGG
AGCTCAAAGCAATGGACGGCGTGGGGTTCAGCTTGGCTTGCCTTCCTTGGCGCCGGCGACGGAGAGGACGTCCTTGGCGA
CGGCGACCACCTCCGGGCCGATGCCGTCGCCCGGGAGGAGCGTAATGCTGTAGCTCCGGTCCGCGGCCGAGCACCGGCAC
GTCGCCGTCGCATGCCGCGGCCGCACCGCCGCGCCGGAAAAGCT------------------TAGGGTTTTGAGCGGAGC
AGCTTGGAGCTGAGTCATCGTC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>SNPs
-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S---------
-----------------------------------------------------S-S-----SS---------------S-
-----------------------------------------------------------------S--------------
--------------------------------------------------------------S-----------S-S---
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------S-----------------------------------------------
--------------S-S----------------------S-------------S-------S----SS--S---------
----SS-----S--S---S-------S-S---------------------------------------------------
----------------------------------------------------S---------------------------
---------S----------------------------------------------------------------------
----------------------------S-S-----------------S---------------------------S---
-----S------S-------------------------------------SSSSS------------S------S-S---
-------------------------S-SSSS--S----------S------------S----------------------
------------------------------------------------------------------------------S-
---------S--------------------S--S------S---------------------------------------
------------------S------------------------------------------------------S------
-----S--S------------SS---------------S-------------S------------S--------------
--S---------------------S--------S-----S--------S-SSS-SSSSSSSS----S-------------
S--------S---------------------------------------------------------------------S
-S---------------SS---------------S-------------SS-S-----------------S-------SS-
------------------S---------------S-S-------S-SSSS----S-------------------------
--------S----------S---------------------------S-------------------------S------
---------S-----------------------------------S-----S-S-S--------------S---------
---------S-------------------SS--S----------------------SS--S-S-------------SS--
S---S---S-----S-----------------------------------------------------------------
-------SS----------S---------S--------S--------------------------S------SS------
--------S--S-----SS----S---S--S--SS--------------------S-SSS---S----------S----S
---------------S-----------S------------------------------------S-------------S-
--------S--SS-S-SSSS-SSSSSSSSS-------------S------------S--------S------SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------SS--SSSSSSSSS----
------S----------------------S---SS---------------------------S--------S--S-----
------------------S--S--------S--------------------S----------------S-----------
-------S-----------------------------------------SSSSS-SSSS-S------S------S-----
---------------------------S-S-S---------S-----------S-SS-S-S-------------------
---S------------S-S---S--------------------------S------------------------------
---------------------------------------S--S----S-------------S---S-------S------
-S--S---S--SS-------S-SSSSSS--SSSSSSSSS-SS-SS-SSSSS-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
---------------------S---SSSSSSSSS------------------------------S--S-----SS-SSS-
S-SSSS-SSSSSSSSSS-------------S---------S--S---------S----SS-S--------SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_20
GGGACGGAGGGAGTAGATCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_1434
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TGATTCC
CTCCCCGCTGATA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>forward_1093
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AAGATGGCTCCAGGGAAACG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_3469
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AACGCATGCAGGTACTTGGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
