>input_sequence_46431
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-------ATGGCGGGCAGCACGACGACGACGATGACGGCGTCGCCGTTCCCGACGGTGGACAAGTGCGCGTCGGCGGGGC
GGAGCGGGGACACGGTGGTGGCGGACCTGGACGGCACGCTGCTGTGCGGCCGGAGCTCCTTCCCCTACTTCGCGCACATG
GCCTTCGAGACCGGCGGCGTGCTCCGCC--------TCCTGGCGCTGCTCCTGCTGGCGCCGCTCGCGGGCCTGCTCTAC
TACCTCGTGTCCGAGTCCGCCGGGATCCAGGTGCTCATCTTCGCCTCCATGGCCGGCGCCAGGGTGGACGACGTCGAGGC
CGTCGCGCGCGCCGTGCTGCCCAAGTTCTACTGCTCCGACCTCCACCCGGAGTCCTGGCGCGTCTTCTCCGCCTGCGGCC
GCCGCTGCGTGCTCACCGCCAACCCCAGGATCATGGTGGAGGCCTTCCTCAAGGACTACGTCGGCGCCCACCTCGTGCTC
GGCACCGAGCTCCTCGTCTGCCGCGGCAGGGCCACCGGCCTCGTCCGCTCCCCCGGCGTCCTCGTCGGCGACAACAAGGC
CGCCGCGCTCCGCCAGGCGTTCGGCGACGCCGCGCCGGAGCTCGGACTCGGCGACAGGAAGACGGACTACCCCTTCATGC
GGCTCTGCAAGGAGGGGTACGTGGTGCCCCCGACGCCCAAGCTCAAGCCCGTGCCGAGGGAGGACCTGCCCAAGCCCGTC
ATCTTCCACGACGGCCGGATCGTGCAGAAGCCGTCGCCGGCGCTCGCGCTGCTCACCTTGCTCTGGATCCCCATCGGCTT
CCTGCTCTCCTGCCTCCGCATCGCCGCCGGCTCGCTCCTGCCCATGC----GCATGGTGTACCACGCCTTCACCGCGCTC
GGCGTGCGCGTCACCGTCAAGGGCAACCCGCCACCGCCGGCCAGCCTTGAGACCGGCCAGACCGGCGTGCTCTT-CATCT
GCTCCCACCGCACCCTCCTCGACCCCATCTTCCTCTCCACCGCCCTCGGCCGCCCCATCACCGCCGTCACCTACTCGGTA
CGTACGCA------GTACATATGCAACTTCTGTTTAGCAGTCAGCCAGTCACCACGGTGCACTCCATTGGC---------
CACGTGCAGACGTGCTGATAA-AAACGGGA---TGTACAGGTGTCGCGGCTGTCGGAGATGCTGTCGCCGATCCGCACGG
TGCGGCTGACGCGCGACCGGGCGGCGGAC------GCGGCCATGATCCGGCGCCTGCTCAGGGAGGGGGACCTGGTGATC
TGCCCCGAGGGCACCACGTGCCGGGAGCCCTTCCTGCTGCGCTTCTCCGCGCTCTTCGCCGAGCTCACCGACGAGATCGT
GCCGGTGGCCATGGAGAACCAGATGAGCATGTTTCACGGCACCACCGCGCGCGGCTGGAAGGGCCTCGACCCCTTCTACT
TCTTCATGAACCCCAGCCCCGGCTACGTGGTCACCTTCCTCAACAAGCT-GCCCCACGAGCTCACCTGCAAGGGCGGCAA
GACCAGCCACGAGGTGGCCAACTACATCCA-GAGGCTCATCGCCTCCACCTTGTCCTACGAGTGCACCAGCTTCACCAGG
AAGGACAAGTACAAGGCGCTCGCCGGCAACGACGGATCTGTCGTCTCCAAGCCAAACATTG---ACAAGAAGAAGTTCAT
GGGCTCCTAA----------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G065400
ATTTACAGAGGAAGTACTACTCACCGAAGAGCGCAAAAT-----TGCTCGCTCCAATCAAACAACTGTAGATGACTGTTG
GGCATACGTATTTCTCGGTTCCCTTTCGAAGAACAAAGTATTTTCGGGC-------GACACCGGCGCGAA-AAGAGCAGC
GCCGCGTGTGCCAAGCCATCTTCAAGCCCTGCGCCGCGTGTGCCG-----AGCCAAGCCATGTTCCGTTCTGAAGCGCCG
CAG-------GAGCCTGACTCCTCCATTTTACTTTATTTTTTGAGGAAATGACTCCTCCATCGGGCGCGCGTCAACGCGA
CAAGACCATGCACAAGAGGTTACGCT----GCACCGCCACAATCCTGTGCCCACTCCCTAAAAGAGGAACAATTATGTGC
CCATCAATGCCCACCTCCCCGTGCCCAAGAGGCAGCTGTTGT-----------------------------TCCTCCATA
ATACGCCTCGAATATCGACCAAGGCAGAGGAGTAGGATCGACCGGGAGGCCCAGCATCGCAAGCTA--------CGTACC
AACCTGTGGCCCGGGCTCTAAATGGCGCTTTCGTACCGTGTA-TACGATTCCTGAAATAAACTACCTGTCGCCCTCGTCC
GG----GCGAACAAGAACGAGAACTCCATCTCTCTCAATCGAAAG-AAAGACAACAAGAACGATAACTCACTGCCCCGAA
TTGTTTTCGCCCGCTTCGCTTTACTGGCGGCAGCGCCAAAGCGCTGGGGACATGTAAAACAAGGCCCGCAACGGCGCATC
CGAAGAGCTCGGTTCTTGGAGCATTGCCAAGTTCACAACACCTAACGACGACGTACCGCATGTACTTGTGCT------CC
TTGTAATCTTCTCTCCGCGATTTCTTCTATACGC--------ACGCGTCGTAAACAATTCATTTTGG-------------
-------------------TCTTGTATATAAACGGCCACGGAAAACTGCGAGACTCTCATGCAGAGTTCTACACTTGGAA
GGAGACAGAGACACACCAAGGCACTTA------C---TACATTGTAGCGTGGGCGCCGGGAGGGATCGGGTTGGGGACTT
GGGATCGATGGCGGGCAGCACGACGACGACGATGACGGCGTCGCCGTTCCCGACGGTGGACAAGTGCGCGTCGGCGGGGC
GGAGCGGGGACACGGTGGTGGCGGACCTGGACGGCACGCTGCTGTGCGGCCGGAGCTCCTTCCCCTACTTCGCGCACATG
GCCTTCGAGACCGGCGGCGTGCTCCGCC--------TCCTGGCGCTGCTCCTGCTGGCGCCGCTCGCGGGCCTGCTCTAC
TACCTCGTGTCCGAGTCCGCCGGGATCCAGGTGCTCATCTTCGCCTCCATGGCCGGCGCCAGGGTGGACGACGTCGAGGC
CGTCGCGCGCGCCGTGCTGCCCAAGTTCTACTGCTCCGACCTCCACCCGGAGTCCTGGCGCGTCTTCTCCGCCTGCGGCC
GCCGCTGCGTGCTCACCGCCAACCCCAGGATCATGGTGGAGGCCTTCCTCAAGGACTACGTCGGCGCCCACCTCGTGCTC
GGCACCGAGCTCCTCGTCTGCCGCGGCAGGGCCACCGGCCTCGTCCGCTCCCCCGGCGTCCTCGTCGGCGACAACAAGGC
CGCCGCGCTCCGCCAGGCGTTCGGCGACGCCGCGCCGGAGCTCGGACTCGGCGACAGGAAGACGGACTACCCCTTCATGC
GGCTCTGCAAGGAGGGGTACGTGGTGCCCCCGACGCCCAAGCTCAAGCCCGTGCCGAGGGAGGACCTGCCCAAGCCCGTC
ATCTTCCACGACGGCCGGATCGTGCAGAAGCCGTCGCCGGCGCTCGCGCTGCTCACCTTGCTCTGGATCCCCATCGGCTT
CCTGCTCTCCTGCCTCCGCATCGCCGCCGGCTCGCTCCTGCCCATGC----GCATGGTGTACCACGCCTTCACCGCGCTC
GGCGTGCGCGTCACCGTCAAGGGCAACCCGCCACCGCCGGCCAGCCTTGAGACCGGCCAGACCGGCGTGCTCTT-CATCT
GCTCCCACCGCACCCTCCTCGACCCCATCTTCCTCTCCACCGCCCTCGGCCGCCCCATCACCGCCGTCACCTACTCGGTA
CGTACGCA------GTACATATGCAACTTCTGTTTAGCAGTCAGCCAGTCACCACGGTGCACTCCATTGGC---------
CACGTGCAGACGTGCTGATAA-AAACGGGA---TGTACAGGTGTCGCGGCTGTCGGAGATGCTGTCGCCGATCCGCACGG
TGCGGCTGACGCGCGACCGGGCGGCGGAC------GCGGCCATGATCCGGCGCCTGCTCAGGGAGGGGGACCTGGTGATC
TGCCCCGAGGGCACCACGTGCCGGGAGCCCTTCCTGCTGCGCTTCTCCGCGCTCTTCGCCGAGCTCACCGACGAGATCGT
GCCGGTGGCCATGGAGAACCAGATGAGCATGTTTCACGGCACCACCGCGCGCGGCTGGAAGGGCCTCGACCCCTTCTACT
TCTTCATGAACCCCAGCCCCGGCTACGTGGTCACCTTCCTCAACAAGCT-GCCCCACGAGCTCACCTGCAAGGGCGGCAA
GACCAGCCACGAGGTGGCCAACTACATCCA-GAGGCTCATCGCCTCCACCTTGTCCTACGAGTGCACCAGCTTCACCAGG
AAGGACAAGTACAAGGCGCTCGCCGGCAACGACGGATCTGTCGTCTCCAAGCCAAACATTG---ACAAGAAGAAGTTCAT
GGGCTCCTAATCAAA------------TTTGAAGCCTA-----AAAAATACTATCAATTATTAAAAGATGTAA-------
--TGTAAC------------AGGGGACAAACTCAATGCCTTTGTGCTGTTGATCTGATATACATATTCTAATGCGGGCTG
CTGGATTAATGCACCTTTTCTTACTAAAGAA-------------------------------------------------
--------------------------------------------------------------------------------
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-------ACAAGAGCAATTGTTCTA----------CACCCACCTGGACGTCACCAACCATCCATCGTGTCCATCCATTCT
GCATCCAATGGTTGATCAAATGGCTTTGCATT-----------------GAATTCGACCTGCAATGGTTGATGAGAGAGC
TTTGCATCCGTCGCGACCCACACGCAGGTGTAGCACCGTAGCACGATTCTCTGGTGCCATAGCTCCCGCCC--TCCCGCG
CTTTGACACCCCGACCCCTCTTCCACCGCTTCCATGAGAAGTGGTGTAGGCCTCTTCCCCCATGGCTGAAAAATCTTGTC
CACGTACAT---------------------------TTCGGATCGTGCTGTCCGGACCGCGGA--AGCCATTCAACGCGG
GCATGTATCAATTCGCAAGGCGGTCCGGATGTACTTTCTCCCGCAAACCGAAAATAAACATGGGGGCTTTGCGGGACGTC
CGGACCGCTGCCAAGCCCGCTTCTGACCGTCCTGACCCACCCAAACCCCCATCGCCCTTTCCGTGTATTTCTTCCGTTGC
ATGCGCCACTTACCGCATGACATTCATGCTGGCCCAGAGCACGTAGCGGCCGGTGTTGACGCC-GCGATTTGACTGGACG
GGATGACGACGCAGACGGACGCGACCTCTCGGGAGCCGCCGCTTCAATGCGGACGCAACTTCCTGAGGAACCAACTCCGT
CCGTTGCGCCACATTAAAGCGGCTGACCGGCCCTTCGGCTTG----GCCGCGACTATTTAAGCAGCGCTCCAGCGCCGTC
CACATTGCAATCTATCTGCTCTTCCTCCTCCTCCTCTTCCTCCCCTCTCCCCGCCCATCTCCCTCCACAACTCCAGCGAT
GGGCAAGTCATGGGCCTGGGCGCCGGTAGGCGGCGTTTCCGGGACGG
>chr4A_23
----------------------ACCGAAGAGCGCAAAAAGTGCCTGCTCCCTCCCATCAATCAACTGTGCATGACTGTTG
GGTACACGCGTTTCCCGGTTCCCTTCCGAAGAACAAAGCATTTCTGGTAGTAGCATGACACCGGCGCAAAGAAGAGCAGC
GCCGCGTGTGCCAGGCCGTGCCCGAGAGCCGCGCCGCGTGTGCCGAGCCAAGCCAAGCCATGTTCCGTTCTGAAGCGCCG
CAGCCTGCAGGAGCCTGACTCCATTTGGTA-------------------------------------CGCGTCAACGCGA
CAAGACCATGCACAAGAGGTTACGCTAGCTGCACCGCCACAATCCTGCGCCCACTCCCTAAAAACGGAACAATTATGTGC
CCATCAATGCCCGCCTCCC-GCGCCCAAGAGGCGCGC---------------------------CCTTCTCTCCACAATA
ATACGCCTCGAATATCGACCGAGGC--AGGAGTAGGATCGACCAGGAGGCCCAACCTCGCAAGCTTTGCACCAA-----C
AACCTGTGGCCCGGGCTCTCAATGGCGCTTTCGTACCGTGTCCTACGATTCCTAAAATAAGCTACCTGTCGCCTTCGTCC
GCTCGAGAGAACAAGAGCTCCA----------TCGACTCTCAATCAAAAGAGAACAACGAGGAGAACTCACTACCCCGAA
TTGTTTTCGCCCGCTTCGCTTTACTGGCGGCACCGCCAAAGCCCCGGGGCCATGTAAAACAAGGCC-GCATCGGCGCATC
CGAAGAGCCCGGTTCTTGGAGCATTGCCAAGTTTACAACACCTAACGACGACGTACCGAATGTACTTGTGCTCCTCCTCC
TTGTAATCTTCTCTCCGCGATTTCTTCTATACGC--------ACGCACGA----------GTTTTTGGTCTTTTGTGTTC
GTGCTCGCCCCGGTTCCGATCCTGTATATAAGCGGCCACGGAAAAGTGCAAAACTCGCGTGCAGAGCTCTACACTTAGAA
GAAGACACAGCAAGGCACGGTTCGGTCCGCGCGAGCGTACATTGTAGCTTGTGTTCCGCGAGAGATCGGGTGGAGG----
-----CGATGGCGGGCACGACCACGACGACGATGACGGCGTCGCCGTTCCCGACGGTGGACAAGTGCGCGTCGGCGGGCC
GGGGCGGGGACACGGTGGTGGCCGACCTGGACGGCACGCTGCTGTGCGGCCGGAGCTCCTTCCCCTACTTCGCGCACATG
GCCTTCGAGACCGGGGGCGTGCTCCGCC--------TCCTGGCGCTGCTCCTGCTGGCGCCGCTCGCGGGCCTGCTCTAC
TACCTCGTGTCCGAGTCCGCGGGGATCCAGGTGCTCATCTTCGCCTCCATGGCCGGCGCCAGGGTGGACGACGTCGAGGC
CGTCGCCCGCGCCGTGCTGCCCAAGTTCTACTGCTCCGACCTCCACCCGGAGTCGTGGCGCGTCTTCTCCGCCTGCGGCC
GCCGCTGCGTGCTCACCGCCAACCCCCGGATCATGGTCGAGGCCTTCCTCAAGGACTACGTCGGCGCCCACCTCGTGCTC
GGCACCGAGCTCCTCGTCTGCCGCGGCCGGGCCACCGGCCTCGTCCGCTCCCCCGGCGTCCTCGTCGGCCACAACAAGGC
CGCCGCGCTCCGCCGGGCCTTCGGCGACGCCGCGCCGGAGCTCGGCCTCGGCGACAGGAAGACCGACTACCCCTTCATGC
GCCTCTGCAAGGAGGGGTACGTGGTGCCCCCGACGCCCAGGCTCAAGCCCGTGCCCAGGGAGGACCTGCCCAAGCCCGTC
ATCTTCCACGACGGCCGCATCGTGCAGAAGCCGTCGCCCGCGCTCGCGCTGCTCACCTTGCTCTGGATCCCCATCGGCTT
CCTGCTCTCCTGCCTCCGCATCGCCGCCGGCTCCCTCCTGCCCATGC----GCATGGTGTACCACGCCTTCACCGCGCTG
GGGGTCCGCGTCACCGTCAAGGGCAGCCCGCCGCCGCCGGCCAGCCTCGAGACCGGCCAGACCGGCGTGCTCTT-CATCT
GCTCCCACCGCACCCTCCTCGACCCCATCTTCCTCTCCACCGCCCTCGGCCGCCCCATCACCGCCGTCACCTACTCGGTA
CGTAC----------------TGCAAACTCTGCACAGCACAGCAGCTACGA-CACAGAGCTAGCGTACTCTTCA-CAGGT
CACGCGCTGATA----GATAGGCAACGGGATGTTTTATAGGTGTCGCGGCTGTCGGAGATGCTGTCGCCGATCCGCACGG
TGCGGCTGACGCGCGACCGGGCGGCGGAC------GCGGCCATGATCCGGCGCCTGCTCAAGGAGGGGGACCTGGTGATC
TGCCCGGAGGGCACCACGTGCCGGGAGCCCTTCCTGCTGCGCTTCTCCGCGCTCTTCGCGGAGCTCACCGACGAGATCGT
GCCGGTGGCCATGGAGAACCAGATGAGCATGTTCCACGGCACCACGGCGCGGGGGTGGAAGGGGCTCGACCCCTTCTACT
TCTTCATGAACCCGAGCCCGGGCTACGTGGTCACCTTCCTCAACAAGCT-GCCGCACGAGCTCACCTGCAAGGGCGGCAA
GACCAGCCACGAGGTGGCCAACTACATCCA-GAGGCTCATCGCCTCCACGCTCTCCTACGAGTGCACCAGCTTCACCAGG
AAGGACAAGTACAAGGCGCTCGCCGGCAACGACGGCTCCGTCGTCTCCAAGCCAAACATCGACAACAAGAAGAAGTTCAT
GGGCTCCTAATTATTATCAAACTTTTTTCTCAAGCCTAAAAACAAAATTACTATCAATTATTAAAAGGTGCAC-------
--TGTAACTGTAATAGTAATAGGGGACAAACGCAATGCCTTTGTGCTATTGATCTGATATACATATTCTAATGCGGGCTG
CTGGATCAAAA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------CAAGAGCAATTGTTGTACACGCACCCAGCTGGACATCACCAACT----ATCGCGTCCATCCATTCT
GCATCTAATGGTTGATGGAATGGCTTTGCAT-------------------------------------------------
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>chr4B_271
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-------------------------------------------------------CTCCATTGGGCGCGCGTCAACGCGA
CAAGACCATGCACGGGAGGTTACGCC----ACACCGCCTCAATCCTGTGCCCACCCCCTAAAAATGGAACAATTATGTGC
CCATCAATGCCCGCCTCCC-GTGCCCAAGAGGCACCGATGTGGGGGCGCACACACGCTGTTTTTCCTTCCCTCCACAATA
ATACGCCTCGAATATCGACCGAGGTG-----GTAGGATCGACCAGGAGGCCCAACCTCGCAAGCGAGCCAGCCGCGTACC
AACCTGTGGCCCGGGCTCTAAATGGCGCTTTCGTACCGCGCACCGCCATCGTC-AAATAAACTACCTGTCGCCTTCGTCC
GG----GCGAACAAGAACTCCA----------TCCCAATCAAAAG-AAAGAGAACAAGAAGGAGAACTCACTGCCCCGAA
TTGTTTTCGCCCGCTTCGCTTTACTGGCGGCAGCGCCAAAGCCCTGGGAGCGTGTAAAACAAGGCC-GCAACGGCGCATC
CGAAGAGCCCGGTTCTTGGAGCGTTGCCAAGTTGACAACACCTAACGACGACGTACCGGATGTACTTGCGCCT---CTCC
TTGTAATCTTCTCTCCGCGATTTCTTCTATACGCCCGCACGCACGCGTTGTAAACAATTCGTTTTTGGTCTGTTGTGTTC
GCGCTCGCCCCGGT-----TCCTGTATATAACCGGCCACGGAAAAGTGCGGGACTCTCATGCAGAGTTCGACACAGGAAG
CACACATTGTAGCCTTGTTTGTGCGAGCGTACTC---TGCATTGCAGCTTGTGTGCCGGGAGAGACCAGGTTGG----TT
GGGACCGATGGCGGGCACGACCACGACGACGATGACGGCGTCGCCGTTCCCGACGGTGGACAAGTGCGCGTCGGCGGGCC
GGAGCGGGGACACGGTGGTGGCCGATCTGGACGGCACGCTGCTGTGCGGCCGGAGCTCCTTCCCCTACTTCGCGCACATG
GCGTTCGAGACCGGCGGCGTGCTCCGCC--------TCCTGCTGCTGCTCGTGCTCGCGCCGCTCGCGGGCCTGCTCTAC
TACGTCGTGTCCGAGTCCGCGGGGATCCAGGTGCTCATCTTCGCCTCCATGGCCGGCGCCAAGGTGGACGACGTCGAGGC
CGTGGCGCGCGCCGTGCTGCCCAAGTTCTACTGCTCCGACCTCCACCCGGAGTCGTGGCGCGTCTTCTCCGCCTGCGGCC
GCCGCTGCGTGCTCACCGCCAACCCCAGGATCATGGTGGAGGCCTTCCTCAAGGACTACATCGGCGCCCACGTCGTGCTC
GGCACGGAGCTCGTCGTCTGGCGCGGCAGGGCCACCGGCCTCGTCCGCTCCCCCGGCGTGCTCGTCGGCGACAACAAGGC
CGCCGCGCTCCGCCAGGCGTTCGGCGACGCCGCGCCGGAGGTCGGCCTCGGCGACAGGAAGACGGACTACCCCTTCATGC
GGCTCTGCAAGGAGGGGTACGTGGTGCCCCCGACGCCCAAGCTCAAGCCCGTGCCAAGGGAGGACCTGCCCAAGCCGGTC
ATCTTCCACGACGGCCGGATCGTGCAGAAGCCGTCGCCGGCGCTCGCGCTGCTCACCTTGCTCTGGATCCCCATCGGCTT
CGTGCTCTCCTGCCTCCGCATCGCCGCCGGCTCGCTCCTGCCGATGC----GCATGGTGTACCACGCCTTCACCGCGCTC
GGCGTGCGCGTCACCGTCAAGGGCAACCCGCCCCCGCCGGCCAGCCTCGAGACCGGCCAGACCGGCGTGCTCTT-CATCT
GCTCCCACCGCACCCTCCTGGACCCCATCTTCCTCTCCACCGCCCTCGGCCGGCCGATCACCGCCGTCACCTACTCGGTA
CGTACGCCGTAGCCGTACATATTCAACCTCTGTACAGCACAGCAGCTACGA-CACAGAGTACTCCATTGGT---------
CAC------ACGTGCTGATGGGCAACGGTATGTTGCGCAGGTATCGCGGCTGTCGGAGATGCTGTCGCCGATCCGCACGG
TGCGGCTGACGCGCGACCGGGCGGCGGAC------GCGGCAATGATCCGGCGCCTGCTCAAGGAGGGGGACCTGGTGATC
TGCCCCGAGGGCACCACCTGCCGGGAGCCCTTCCTGCTGCGCTTCTCCGCGCTCTTCGCCGAGCTCACCGACGAGATCGT
GCCGGTGGCCATGGAGAACCAGATGAGCATGTTCCACGGCACCACGGCGCGAGGGTGGAAGGGGCTCGACCCCTTCTACT
TCTTCATGAACCCGAGCCCCGGCTACGTCGTCACCTTCCTCAACAAACT-GCCCCACGACCTCACCTGCAAGGGCGGCAA
GACCAGCCACGAGGTGGCCAACTACATCCA-GAGGCTCATCGCCTCCACCTTGTCCTATGAGTGCACCAGCTTCACCAGG
AAGGACAAGTACAAGGCGCTCGCCGGCAACGACGGCTCCGTCGTCTCCAAGCCAAACATCG---ACAAGAAGAAGTTCAT
GGGCTCCTAATTATTAAACCT-TTTTTTCTGAAGCCTAAAAAC-AGAAAAAACTTTACTGCACCAGCACCATCAAGGAAG
GATGTAAA------------AGGGGACAAACTCAATGCCGTTGCGCTATTGATCTGATATA-ATATTCTAATGCGGGCTT
CTGGATCAAAA---------------------------------------------------------------------
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--------------CAGTCGTTCTA----------CACTCAGGCGGACGTCATCAACT----ATCGTTTCCATCCATTCT
GCACCCAATGGTTGATGAAATAGCTTTGCAAT-----------------GAATTCGACCTACGATGGTTGATGAAATAGC
TCTGCATCCATCGCAGCCCACACGCACATCTACCACTGT---ACGATTCTCTAGTGCCATAGCTCTCCCACCTTCCCGCG
CTTTCACACCCCGACCCCTCGTCCACCGCTTCAATGAGAATTGGTGCAA--CCCTTCCTCCGCTGCTGAAAAATCTCGGG
CATTTCCAACGACGACCTTCAAATCATCCGCATACGTTCGAACCGCGCTGTCAGTACCATGATATAGCCATTCAACATGG
GTCTGTATCGGTCCGCATGATGGTCCGGACGTACTTTCTCAAGTAAACTAGAGACAAAGCTAGAGGGCTTTGCGGACGTC
TAGACCGCTGCCAAGCCCGTCTCTGACCGTCCTGGCTCTCCCAAGCT--------------------TTCCTTCTGATGC
ACGCCCCGCTTACCGCGTGATATTCATGCCGGCCCAAAGCATGCATCGTCCGGCATTGACACTTGCGATTTGACCGGATG
GGACGGCGTCGCAGACGGACCCGGCCTCTCAGGAGCCGCCGCTTCAATGCAGACGCAGCTTCCCGAGGAACCAACTCCAG
CCGCTGCGCCACATTAAAGCGGCTGACCGGCCCTTCGCATGGCCTAGCCGCGACTATTTAAGCAGCGCTCCGACGCCGTC
CACTTCGCAATCTAAACATTTTCCCC------CCTCCTCCTCCTCTCTCCCCTCCCATCTCCGTCCACAACACTGACGAC
GGGAAAGTCGTGGGCCCCTGCGACGGCAGGCGACAGTTCCAGGATGG
>chr2B_1015
GACAACCAA-----------------------------------------------------------------------
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------------------------------GATGACGGGCTCACCGTTCCCGACGGTGGAGAAGTGCTCGTCTGTGGACC
GGAGCGGGGACACGGTGGTGGCAGACCTGGACGGCACACTGCTGTGCGACCGGAGCTCTTTCCCGTACTTCGCGCACATG
GCTTTCGAGACCGGCGGCGTACTCCGGC--------TCCTGTTGCTCCTCCTGCTGGCTCCACTCGCAGGGCTCCTCTAC
TTGTTCGTGTCCGAGTCGGCGGGCATACAGGTGCTCATCTTCGGGTCCATGGCCGGCGCCAAGGTCGATGACGTCGAGTC
TGTGGCACGCGCGGTGCTGCCCAAGTTCTACTGTTCCGACCTCCACCCGGAGTCGTGGCGTGTGTTCTCGGCGTGCGGAC
GCCGGTTCGTGCTCACCGCGAACCCAAGGATCATGGTGGAAGCCTTCCTGAAGGACTACATCGGCAGCGATGTCGTGCTC
GGCACTGAGCTCGTGGTCTGGGGCCGTAGGGTGACTGGGCTCGTCTGCTCCCCTGGCGTGCTCGTCGGCGACAACAAGGC
CGATGCGCTGCGTCAAGCGTTCGGCAACGCAATGCCGGAGATTGGCCTCGGTGACAGCAAGTCGGACTTTCCGTTCATGC
GGCTGTGCAAGGAGCGGTACATGGTGCCCCCGACGCCGAAGATGAAGCCCGTGCCGCAGGAAAACCTGCCGAAGACGGTG
ATCTTCCACGATGGCCGGATCGTCCACAGGCCGTCGCCGGCGCTCGCGCTGCTCACCTTGCTCTGGTTTCCCATCGGGCT
CCTGCTCTCCTTCCTCCGTATCGCCGCGGGCTCGCTCCTGCCGATGC----GCATGGTGTACCACGCCTTCACTGCTCTC
GGAGTCCGCGTCACCATCAAGGGCAACCAGCCACCACCAGCATGCCTCGAGTCCGGCCAGACCGGCGTGCTCTT-CGTCT
GCTCCCACCGCACTCTCCTCGATCCAATCTTCCTTTCCACGGCCCTCGGCCGGCCGATCACCGCCGTCACCTACTCCGTA
TGTA-------------CATATGCAACTACTGGATAGCAGTCAC------------------TCCATTAATTGGTCACGT
CACGTGTTGATA-------AA-CAACCGGA---TGTACAGGTATCACGGCTGTCGGAGATACTGTCGCCGATCCGAACGG
CGCGGCTGACCCGTGACCGCGCGGTGGAC------GCGGCGATGATCCGGCGCCTGCTCAAGGAGGGCGACCTTGTAGTC
TGTCCCGAGGGCACGACGTGCCGGGAGCCATTCCTGCTGCG-TTCTCGGCCTTGTTCGCGGAGTTGACTGACGAGATCGT
GCCGGTCGCGATGGAGACCCAGATGAGCATGTTTCATGGCACGACGGCGCGGGGGTGGAAGGGGCTGGACCCCTTCTACT
TCTTCATGAACCCAAGCCCGGGCTACATGGTCACCTTCCTCGACAAGGT-CCCACACGAGCTCACCTGCAAGGGCGGCAA
GACCAGCCATGAGGTGGCCAACTACATCCA-GAGACTCATTGCCTCCACGCTCACGTATGAGTGCACCAGCTTCACCAGG
AAGGACAAGTACAGGGTGCTCGCCGGCAATGATGGTTCCCTCGTTTCCAAGCCTAACATCG---ACAAGAAGAAGTTCAT
GGGCT---------------------------------------------------------------------------
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>chr2A_1024
--------------------------------------------------------------------------------
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------------------------------GATGACGGTATCACCGTTCTTGACGGTGGAGAAGTGCTCGTCTGTGGACC
GGAGCGGCGACACGGTGGTCGCAGACCTGGACGGCACGCTGCTGTGCCACCGGAGCTCTTTCCCGTACTTCGCGCACATG
GCTTTCGAGACCGGCGACCTACTCCGGCTCCTGTAGTCCTGTTGCTCCTCCTGCTGGCGCCACTCGCAGGGCTCCTCTAC
TTCTTCATGTCCGAGTCGGCCGCCATACAGGTGCTCATCTTCGCGTCCATGGCCGGCGCCAAGGTCGACGACGTCGAGGC
CGTGGCGCGCGCCGTGCTACCCAAGTTCTTCTGTTCCGACCTCCACCCGGAGTCGTGGCGTGTGTTCTCCGCGTGCGGAC
GCCGGTTCGTGCTCACCGCGAACCCGAGGATCATGGTGGAAGCCTTCCTGAAGGAGTACATCGGCGCCGACGTCGTGCTC
GGCACGGAGCTCGTGGTCTGGGGCCGTAGGGCGACTGGCCTCGTCTGCTCCCCCGGCGTGCTCGTCGGCGAGAACAAGGC
CGACGCGCTGCGTCAAGCGTTCGGTAACGCAACGCCGGAGATTGGCCTCGGTGACAGCAAGTCAGACTACCCGTTCATGC
GGCTGTGCAAGGAGCGGTACTTGGTGCCCCAGACGCCGAAGATGAAGCCCGTGCCGCGGGAGAACCTGCCGAAGACGGTG
ATATTTCACGATGGCCGGATCGTCCACCGGCCGTCGCCGGCGCTCGCGCTGCTCACCTTGCTCTGGTTTCCCATCGGGCT
CCTGCTCTCCTTCCTCCGTATCGCCGCGGGCTCTCTCCTGCCGATGC----GCATGGTGTACCACGCCTTCGCTGCGCTC
GGCGTGCGCGTCACCGTCAAGGGCAACCCGCCACCACCAGTATGCCTCGAGTCCGGCCAGACCGGCGTGCTCTT-CGTCT
GCTCCCATCGCACTCTCCTCGACCCCATCTTCCTTTCCACGGCCCTCGGCCGGCCGATCACCGCCGTCACCTACTCCGTA
TGTA-------------CATATGCAACCTCTGGATAGCAGTCAG------------------TCCATTGGA---------
CACGTGTTGATA-------AA-CAACGTGA---TGTACAGGTATCACGGCTGTCGGAGATGCTGTCGCCGATCCGGACGG
CGCGGCTGACCCGTGACCGCGCGGCCGAC------GCAGGTATGATCCGGCGCTTGCTCAAGGAGGGCGACCTTGTGATC
TGTCCCGAGGGCACGACATGCCGGGAGCCATTCCTGCTGCGTTTCTCGGCCTTGTTCGCGGAGCTGACAAACGATATCGT
GCCGGTCGCGATGGAGAACGAGATGAGCATGTTCCATGGCACGACGGCGCGGGGGTGGAAGGGGCTGGACCCCTTCTACT
TCTTCATGAACCCAAGCCCAGGCTACGTGGTCACCTTCCTCGACAAGGT-CCCACACGAGCTCACCTGCAAGGGCGGCAA
GACCAGCCATGAGGTGGCCAACTACATCCA-GAGACTCATTGCCTCCACGCTCACGTATGAGTGCACCAGCTTCACCAGG
AAGGACAAGTACAGGGTGCTCGCCGGCAACGATGGTTCCGTCGTGTCCAAGCCCAACATAC---AAAAGAAGAAGCTCAT
GGG-----------------------------------------------------------------------------
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>chr2A_1652
--------------------------------------------------------------------------------
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--------------------------CCCCCGACGCCGAAGATGAAGCCCATACCGCACGAGGAACTGCCGAAGCCCGTT
ATCTTCCACGATGGCCGGATCGTCGACAAGACGTTGCCGGCGGTCGCGCTGCTCACCTTGCTCTGGATTCCCATCGGGCT
CGTGCTCTCCTTCCTCCGTATCACCACGGGCTCGCTCCTGCTGATGCGCATGCATGGTGTACCACGCCTTCACCGTGCTC
GGCGTGTGCG-CACCGTCAAGGGCAACCCGCCACCACCAGCATGCCTTGAGTCAAGTCACACCGGGATGCTCTTCCATCT
GCTCCCACCGCACCCTCCTCGACCCCGT----------------------------------------------------
-----------------------------------------------------------------------------GGT
CACACGTTGATA-------AA-CAACGGTA---TTTACAAGTATCACGCCTGTCGGAGATGCCGTCGCCGATCCGAATGG
CACGGCTGACACGTGACCGCAAGGTTGGTGATCGGGTGTCTATGATCGGGTGTCTACTCAAGGAGGGCGACCTTGTGATC
TGTCCCGAGGGCACGACGTGCCCGGAGCAATTCCTGCTGCGTTTCTCAGCCTTGTTCGTGGAGCCGACAGATGAGATCGT
GCCGGTCGCGATGGAGAACCGGATGAGCATGTTCCATGGCACGACGGC-CGGTGGTGGAAGGGGCTGGAA-CCTTCTACT
TTTTAATGAACCCAAGCCCGGTCTACGTCGTCACCTTCCTTGACAAGGTCCCACA-----CTCACCTGCAAGGGCGGCAA
GACCAGCCATGAGGTGGCCAACTACATCCAAGAGACTCATTGCCTCCACACTCGCGTATGAGTGCACCAGCTTCACCAGG
AAGGACAAGTACAAGGTGCTCGCCGGCAACGATGGTTCCGTTGTGTCCAAGCCAA-CATCG---ACA-------------
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>chr4B_2095
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---------ACGTGCTGACAGCCAACGGGATGCTGCGCAGGTGTCGCGGCTATCGGAGATGCTGTCGCCGATCCGCACGG
TGCAGCTGACGCGCGACCGGGCGGCGGAC------GCGGCCATGGTCCGGCGCCTGCTCAAGGAGGGGGATCTGGTG---
-------------CCACGTGCCGGGAGCCCTTCCTGCTGCGCTTCTCCGCGCTCTTCGCGGAGCTCACCGACGAGATCGT
GCCGGTGGCCATGAAGAACCAGATGAGCATGTTCCACGGCACCACCGCGCGCGGCTGGAAGGTTCTCGACCCCTTCTACT
TCTTCATGAACCCCAGCCCCGGCTACGTTGTCACCTTCCTCAACAAGCTGCCCCCACGACCTCACCTGCAAGGGCGGCAA
GACCAGCCACGAGGTGGCCAACTACATCCA-GATACTCATCACCTCCACGCTCTCGTACGAGTGCACCAGCTTCACCAAG
AAGGACAAGGACAAGACACTCGCCGGCAACGACGGCTCCGTCGTCTCCAAGCCAAACATCG---ACAAAGAGAAGTTCAT
GGGCTCCTAATTATTAAAC------TTTTTGAAGCCTAAAAAC-AAATTACTATCAATTATTAAAAGATGTAC-------
--TGTAAT------------AGGGGACAAACTCAATGCTATTGATCCG----------ATA-ATACTCTAATGCGGGCTG
CTGGATTAATGCACCTTTGTTTTAACTAGTACTCCCTCCATTCCTAAATACTTCCTCCGTCCCAAAATTCTTGTCTTAGA
TTTTATCTAGATACGGATGTATCTAATACTAAAACGTGACTTGATTCATCCGTATTTAGACAAATCTAAGACAAGAATTT
TAGGACGGAGGGAGTACTATAAGTCTTTTTAAACATTTCAAATGGACTATAACATACTGATGTATATAGACATATTTTAA
AGTGTAGATTCACTCATTTTGCTTCGTATGTAGTCACTTGTTAGAATCTCTAAAAGAACTTACATATGGGAATGGAGGGA
GTACAATACAAGAGCAATTGTTCTA----------CACCCAGCTGGACGTCACCAACT----ATCGTGTCCATCCATTCT
CCATCT-ATGGTTGATGAAATGTCTTTGCATGTACGTACGACCTGCAACGAATTCGACCAGTAATGGTTGACGAAAGAGC
TTTGCATCCATTGCGACCCACACCCA------------------------------------------------------
CTTTGACACCCCGGCCCCTCTTCCACCGCTTCCATGAGAAGTGGTGCAGGCCTCTTCCTCCGCGGCTGAAGGATCTTG--
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>SNPs
SSSS--SS-SSSSSSSSSSSSS----------------S----------S----S-----S-------SS----------
--S-S---SS----S----------S------------S----SS--SS------------------S------------
-------------S---S-SSS-S--SS-S--------------------------------------------------
----------------------SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSS------S------------------
---------------------------------------------------------------SS---------------
------------S------S--------------S-SS-SSS--------------------------------S-S---
--------------------S----SS----------------S---------S-S------------------------
-----------------------------------------------------S-------------------S------
------------------SSS-SSSSSSSSSS--S-----S----------S--------S--S----------------
------------------------------------------S------S----------------S-------------
--------S------------------------S------------------------S---------------------
------------------------------------------------S-----------S----S--------------
---------------------S---------S-------------S----------------------------------
-S-----S---S--S-SSS--SS-S-S---------------------S--S-S--------S-------------SS--
----S------------SS--S--------------------------------------------------------S-
----------------------S---------------------------------------------------------
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------------------------------------------------------S-------------------------
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---------------------------------------------S----------------------------------
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-------S-------------------------S----------S-SSSS-S---S-S------------S---------
-------S--------------S---------------------------------------------------------
------------------------------------------------------------S-------------------
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---------------------------------------------------------------S----------------
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-----------------------------------S--S--------------------S--------------------
-----------S-SS---------------------------------------------------------S-------
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------------------SS--SSSSS--S--------------------------------------------------
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-----------------------------------------S---------------SSSSS------------------
----------------S---------------------------------------------------------S-----
---------S----------------SS-S--S---S--SSS----------S------------S-S-S----------
----------------------------------------------S-----------S--SS---------------SS
--SS-S--S-------------------------------S-S--S------S-S---SS-SS-------------SS--
-SS------SS-S----S-SS--------S----------SS-S----SSS-S-S---SS-S-S--SS--SSS-------
SS-----------------SS-------------S-S-S-----S-SSSSSSSSSSSSSSSSSSSSS--S----S-S---
-S--S--S--------S---S--------S------S----S-S-S--S----SS-----S-S-----------S---S-
---S-S--S-----------S--S------S-------------------S------S-----S--------------SS
---S---------------------------------SS-S------------------------------SS-------
---S-S--------SSSSS-S-S--SSSSSSS----S------S--------S---------S--------S-SSS---S
---S-----S------SSS---S---S-----S-SS----S---S--
>forward_1063
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---GACAGAGACACACCAAGGCA---------------------------------------------------------
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>reverse_3473
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--------------------------------GCACCGTAGCACGATTCTCT----------------------------
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