>input_sequence_46429
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------------------------------------AGTGCGTGAGTGGGGATGGATCAGCCGGTGCCCTCCATCTGCGG
CCTCCACCCGGGCATCGCCGTCACCGGCTTCTGCTCCGCCTGCCTCCGCGAGCGGCTCGCCGGCCTCCACCCCAGCGACC
CCGCCGACTCGGCGGAGCTCCGCCGCTGCAAGTCCTTCTCCTACGCCCGCTCCGCCGCCGCCTACTTCGAGCCGCAGCGC
CGCTCCTGCGACGCCCGCGGCGCCGCCGCCCTCTTCCACCAAGAGACAACCTACCTCCCGGGGGAGGAGGAACATCTTCC
GCCAACAGCGGCGGGCAGGCCGATGAAAGACCACATCCACCAAGAGTCCTCCTCCAAGAAGACCGCCGGCACATTCGGGG
GGTTGGGCAAGAAATGGCAGGAATGGCGCCGCAAGAGCAAGCTCAAGAAGCAGGAGCAGGGGCCCATCGCCAGCAGGGCC
GCCATGCCGCACGAGAATCTCCGCCACCGCAGCTTCCGCGACACGCGCTCCGAGGTCGCCGTCGACGCGCTCGGCCGGCG
CTCCATCGATGTGGACACCCTTCTCTCGATGGACGCCGGCCGCATCTCGGTGGATGAGCCCCGAGCTTCTTGTGACGGCT
ACCACGGCGTACGGTTGCGCATTCCCCCGATGCTGTCCCTGGTCGAGGATGCGCCCGTCCCACGCTCTGATGGCCAAATC
CCCGTGGAGGAAGACGAGGACACTGAGCCCGGCGGCTGCGCCCAGACAAGGGACTACTACTTGGACTCCTCCAGCTCCAG
CAGGAGGCGCCGGAGCGTGGACCGCTCCTCCTTCTCCAGCCGCAAGTCATTCTCTGATGCCAGTGACCTGCCCAGGATGA
TGGCCGGTGCCACTGCCAATGCCAATGCCCGGGTTTCACCGGCCATTGGTGCCGAGTTCTATCAGTACCACCACGCTCAG
AGTCAGAGTGTTCTTGACCATCATCAGCAGTGGGAGCAGGGACCGAATTCTTATTCTCTCCGGGATGATGATATGTCAGG
GAGCATTGATCCCGCGGCATTCCGGGATGGCATCCCTCTGCCGGCCAAGAAGTCTAAGAAGTGGATCAAGGGGTGGAACA
TCTTTGGTCTCATACATAAGAAGAGCAGCACCAAGGAATCTGAAGCTGCCAGTTTGGCCAACAGATCATTCTCGGAGAAG
TGGCCCGAGCTCCGCGCAAGGGGATACAATGGGCAGATGCTCAGGTGCAACAGCAGCGTAAGCGCGAGGAGCTCCTTCGG
TAATAGTGGTGCAGCAATGGGCGGCATGAGCGGGAGGAGGAGCAATGTGGAAATGCATGTTAATGGCTTAGGGAGGATGA
GAAAGGATGAGGTTTTACTCGAGAGGAATTTCAGTGCAAGGTACACGCCTTGCACGGTCGATAATGGCGCGATCCCTTAT
CCAATCGGAGGTGCCCAATTCAGCCGGCGAAATCAGAATGGGATGCCCGGGAAAGGAAGGCCTGCTCGTTCATCCAATTC
TTTGCCTCGTAGCTCGCTCGGGATGTACTGATCTAGCAGTGATGAAGGCAGGTTTATGTTCTTCTCCACCATCTTATGTG
CCTTGGCTACAATGTGCATATCTATGGTAGCTAGCATCATCAGAATCAACTTTTTATAGGCTCAGATCAGAAGAAA----
--------------------------------------------------------------------------------
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-------------------------------
>chr4A_1_TraesCS4A01G179000
GAATGTACAAGTCTGACAAGATCCTTGTGCTAATTGTGGCGCTGTTGCTTTCAGATTGAAACTAATTGAAGGCCCCAACC
AGTCGAGTCCAGACCATGCATCCTGTGCAAGCTTATGCACAATGATGGTGCTGAATAGCAAGGTGGACATGAGCATTAGC
TAGCAGAAGCTGGTAGGTATTACAATCCAAGGCAA------AGCACAAGCACAAGCGGCAGCAGGTCGGTCGACCGATCG
AT----CATAAGAGAAAGTTAGCGTGCGTGCATGCATGCA----TT----GGTGGAAATTATCATTCATGATGCACTGCA
TTCTTGGGAATATTATGATTATGCTCATATCCTGGTCCATCCAGCTAATTATTTGCTATGCCGATGCATCAATTTCACCC
ACTCCTACTACTGCTCTTGTGTTTATCATCCATTCACTGGTCACTTGTAATTAGAGGTGTTGGCATGCATGTTTTGTTAC
CCTGCCCTTGGGATTTGTTTGTCTGGCCAAAATGGAACTAGACACAGATGTGGGAATGCATGAAGTGAAATGTTAAAGCA
AATGAA-----GAATGGAAACAAACAAATGTGAGTTGTTCTGGAATGTGCAACAAGAGTCCAAGATGGGGGAAAGGGTAA
AGCAAAAGAGGGAGAAGAGGGACAGGGGCAAGAAAGGAAAAGTGAAAAAGAAAAGGAAGGGAAAGAGGTCGCCATCACTG
CCTCTGCCTGATGAGGTCTGTCTCTTTTGCCTGCTCAGCTCATCCCCTCTCCCAGCTGAGCTGAGGGCTCAAACAGCAGT
AGAGAACA---------------------------------------CAATAGATACAAGAATACAACACAAGAGTCTTC
CATTCCACTCCTCATCTTGTCTTTCTCCCACATCACAACATCACAAGTTTCTTTCTTCTCTTCTCTTCTCTTCAGACAAG
AACATCAGCCCG--TCTTCTTAAGTAGGAATTCAGTTCGCCAATGGTGCTGCCTCCTTGCCCTCTCCCTTG---------
---ATAGATATAGACAGACGAGTGAAGTGAGTGAGCAGTGCGTGAGTGGGGATGGATCAGCCGGTGCCCTCCATCTGCGG
CCTCCACCCGGGCATCGCCGTCACCGGCTTCTGCTCCGCCTGCCTCCGCGAGCGGCTCGCCGGCCTCCACCCCAGCGACC
CCGCCGACTCGGCGGAGCTCCGCCGCTGCAAGTCCTTCTCCTACGCCCGCTCCGCCGCCGCCTACTTCGAGCCGCAGCGC
CGCTCCTGCGACGCCCGCGGCGCCGCCGCCCTCTTCCACCAAGAGACAACCTACCTCCCGGGGGAGGAGGAACATCTTCC
GCCAACAGCGGCGGGCAGGCCGATGAAAGACCACATCCACCAAGAGTCCTCCTCCAAGAAGACCGCCGGCACATTCGGGG
GGTTGGGCAAGAAATGGCAGGAATGGCGCCGCAAGAGCAAGCTCAAGAAGCAGGAGCAGGGGCCCATCGCCAGCAGGGCC
GCCATGCCGCACGAGAATCTCCGCCACCGCAGCTTCCGCGACACGCGCTCCGAGGTCGCCGTCGACGCGCTCGGCCGGCG
CTCCATCGATGTGGACACCCTTCTCTCGATGGACGCCGGCCGCATCTCGGTGGATGAGCCCCGAGCTTCTTGTGACGGCT
ACCACGGCGTACGGTTGCGCATTCCCCCGATGCTGTCCCTGGTCGAGGATGCGCCCGTCCCACGCTCTGATGGCCAAATC
CCCGTGGAGGAAGACGAGGACACTGAGCCCGGCGGCTGCGCCCAGACAAGGGACTACTACTTGGACTCCTCCAGCTCCAG
CAGGAGGCGCCGGAGCGTGGACCGCTCCTCCTTCTCCAGCCGCAAGTCATTCTCTGATGCCAGTGACCTGCCCAGGATGA
TGGCCGGTGCCACTGCCAATGCCAATGCCCGGGTTTCACCGGCCATTGGTGCCGAGTTCTATCAGTACCACCACGCTCAG
AGTCAGAGTGTTCTTGACCATCATCAGCAGTGGGAGCAGGGACCGAATTCTTATTCTCTCCGGGATGATGATATGTCAGG
GAGCATTGATCCCGCGGCATTCCGGGATGGCATCCCTCTGCCGGCCAAGAAGTCTAAGAAGTGGATCAAGGGGTGGAACA
TCTTTGGTCTCATACATAAGAAGAGCAGCACCAAGGAATCTGAAGCTGCCAGTTTGGCCAACAGATCATTCTCGGAGAAG
TGGCCCGAGCTCCGCGCAAGGGGATACAATGGGCAGATGCTCAGGTGCAACAGCAGCGTAAGCGCGAGGAGCTCCTTCGG
TAATAGTGGTGCAGCAATGGGCGGCATGAGCGGGAGGAGGAGCAATGTGGAAATGCATGTTAATGGCTTAGGGAGGATGA
GAAAGGATGAGGTTTTACTCGAGAGGAATTTCAGTGCAAGGTACACGCCTTGCACGGTCGATAATGGCGCGATCCCTTAT
CCAATCGGAGGTGCCCAATTCAGCCGGCGAAATCAGAATGGGATGCCCGGGAAAGGAAGGCCTGCTCGTTCATCCAATTC
TTTGCCTCGTAGCTCGCTCGGGATGTACTGATCTAGCAGTGATGAAGGCAGGTTTATGTTCTTCTCCACCATCTTATGTG
CCTTGGCTACAATGTGCATATCTATGGTAGCTAGCATCATCAGAATCAACTTTTTATAGGCTCAGATCAGAAGAAAGGTC
GTCAAGTGAAGTGGTGATGGTGTTGGATTATATACCTTACTTAGTTTTATTTCCTACTGGGCTTGGGAGTGGAGTATAGC
ATTTAACTTTACACCCTTGTATAAGATATGCCATATGTATGTTTGCTTTTGTCAATTGAATTCAAGTTAGCATTCTGGCA
ATAGCAATAACATGATGTAAGGGCTATGGAATCGAATGCCGGTAAGCTGGTCGGTGTTGCAAGATGTTTTGGATCTTGTT
TGATATTGACAGCAAGAAAATTGCAGGGTCGTTGTCACAGCATAGCAGCATGCCAGGTTTTCTTCCTCTTTTGTTCATTG
TGTTGTGTGCCGTTTCTTCCACCAGAAATCCTAAATCTATGGGTATCTTTTGCTGCTCACTTGAATTCTAATCCGTC---
-TTCACGTTCTTCATTTCTTAAGCC-GTGCTTATGTTTTTGAAAGGCTACAGAGGTTGCT-ATTTTCAGGTTATTGTAAA
AATCATATTACTCTGCTGGGTAAATCAGATCATCGTTATGTCATCTAAGGATGTCCTATCGCATTTCCTTTCTTATGTTT
CAGAATGAAGCAATATGTA-AATAGCAGCTTGATGCCTTGATTAAGAAAAGAAGCCCCAAAGCCGAATACCCAGCATCTA
AATTCTGCTCAGCCGTAAGGGGATTATCATAACCCCAGGCACCATACCGAATCTAAGTTGAATGGATTGTGGTCCTTATT
CCA-----------------------------------CTGGGGTGTCTATTTGCAGTTGGAGGGGAGCTGTATCTGTTT
CAAATTCATAACGAAGGTAAATATACAAGATCACTTAACCAGAAGCAGCCTTAACTAC----------------------
-----------TCAGAAAGTTAATTTGATTCCAGGCCATGGCATACGAAACAAGGTTCGGTATGTCTGCGCAGCAACCTT
AAGAGCATTACTAGTAGAACCCTCAAATCCTCAAACGCTCACTAGCGTTTTAAGGGTCCAAAAATGATCTTTTTTGCACT
TTTACGGGTTGAAAAACAGGGGCAAAGATTA
>chr4D_1
GAATGTACAAGTCTGACAAGATCCTTGTGCTAATTGTGGTGCTGTTGCTTTCAGATGGAAACTAATTGAAGGCCCCATCC
AGTCGAGTCCAGACCATGCATCCTGTGCGAGGTTATGCACAATGATGGTGCTGAATAGCAAGGTGGACATGAGCATTAGC
TAGCAGAAGCTGGTAGGTAGTACAATCCAAAGCAA------CGCACAAGCACAAGCAGCAGCAGGTCGGTCGACCGATCG
AT----CATAAGAGAAAGTTAGCGTGCGTGCATGCATGCA----TGCATCGGTGGAAATTATCATTCATGATGCACTGCA
TTCTTGGGAATATTATGATTATGCTCATATCCTGGTCCATCCAGCTAATTATTTGCTATGCCGATGCATCAATTTCACCT
ACTCCTACTA---CTCTTGTGTTTATCATTCATTCACTGGTCACTTGTAATTAGAGGTGTTGGCATGCATGTTTTGTTAC
CCTGCCCTTGGGATTTGTTTGTCTGGCCAAAATCGAACTAGACACAGATGTGGGAATGTATGAAGTGAAATGTTAGAGCA
A-TGAAGAATGGAATGGAAACAAACAAATGTAAGTTCTTCTGGAATGTGCAACAAGAGTCCAAGATGGGGGAAAGGGTAA
AGCAAAAGAGGGGGAAGAGGGACAGGGGCAAGAAAGGAAAAGTGAAAAAGAAAAGGAAAGGAAAGAGGTCGCCATCACTG
CCTCTGCCTGATGAGGTCTGTCTCTTTTGCCTGCTCAGCTCATCCCCTCTCCCAGTTGAGT-------TCAAACAGCAGC
ACCACTCTAGAACACAACACCAACAGGA--GGGGTAGCTTCTCCTCTCAATAGATACAAGAATACAACACAAGAGTCTTC
CATTCCACTCCTCATCTTGTCTTTCTCCCACATCACAACATCGCAAGTTTCTTTCTTCTCTTCTCTTCTCTTCAGACAAA
AACATCAGTCTTCCTCTTCTTAAGTAGGAATTCAGTTCGTCAATGGTGCTGCCTCCTTGCCCTTGCCCTTG---------
---GTAGATATAGATAGACGAGCGAAGTGAGTGAGCAGTGCGTGAGTGGGGATGGATCAGCCGGTGCCCTCCATCTGCGG
CCTGCACCCGGGCATCGCCGTCACCGGCTTCTGCTCCGCCTGCCTCCGCGAGCGGCTCGCCGGCCTCCACCCCAGCGACC
CCGCCGACTCGGCGGAGCTCCGCCGCTGCAAGTCCTTCTCCTACGCCCGCTCCGCCGCCGCCTACTTCGAGCCGCAGCGC
CGCTCCTGCGACGCCCGCGGCGCCGCCGCCCTCTTCCACCAAGAGCCAACCTACCTCCCGGGGGAGGAGGAACATCTTCC
GCCAACAGCGGCGGGCAGGCCCATGAAAGACCACATCCACCAAGAGTCCTCCTCCAAGAAGACCGCCGGCACATTCGGGG
GATTGGGCAAGAAATGGCAGGAATGGCGCCGCAAGAGCAAGCTCAAGAAGCAGGAGCAGGGGCCCATCACCAACAGGGCC
GCCATGCCGCACGAGAATCTCCGGCACCGCAGCTTCCGCGACACGCGCTCCGAGGTCGCCGTCGACGCGCTCGGCCGGCG
CTCCATCGATGTGGACAGCCTCCTCTCGATGGACCCCGGCCGCATCTCGGTGGATGAGCCCCGAGCTTCTTGTGACGGCT
ACCACGGCGCACGGTTGCGCATTCCCCCGATGCTGTCCCTGGTCGAGGATGCGCCCGTCCCACGCTCTGATGGCCAAATC
CCTGTGGAGGAAGACGAGGACACCGAGCCCGGCGGCTGCGCCCAGACAAGGGACTACTACTTGGACTCCTCCAGCTCCAG
CAGGAGGCGCCGGAGCGTGGACCGCTCGTCCTTCTCCAGCCGCAAGTCATTCTCTGATGCCAGTGACCTGCCCAGGATGA
TGGCTGGTGCCACTGCCAATGCCAATGCCCGGGTTTCACCGGCCATTGGTGCCGAGTTCTATCAGTACCACCATGCTCAG
AGTCAGAGTGTTCTTGACCATAACCAGCAGTGGGAGCAGGGACCAAATTCTTATTCTCTCCGGAATGATGATATGTCAGG
GAGCATTGATCCGGCGGCATTCCGGGATGGCATCCCTCTGCCGGCCAAGAAGTCTAAGAAGTGGATCAAGGGGTGGAACA
TCTGGGGTCTCAAACATAAGAAGAGCAGCACCAAGGAATCTGAAGCTGCCAGTTTGGCCAACAGATCATTCTCGGAGAAG
TGGCCCGAGCTCCGCGCAAGGGGATACAATGGGCAGATGCTCAGGTGCAACAGCAGCGTAAGCGCGAGGAGCTCCTTTGG
CAATAGTGGTGCAGCAATGGGCGGCGTGAGCGGGAGGAGGAGCAATGTGGAAATGCATGTTAATGGCTTAGGGAGGATGA
GGAAGGATGAGGTTTTACTCGAGAGGAATTTCAGTGCAAGGTACACGCCTTGCACGGTCGACAATGGCGCGATCCCTTAT
CCAATCGGGGGTGCCCAATTCAATCGGCGAAATCAGAATGGGATGCCCGGGAAAGGAAGGCCTGCCCGTTCATCCAATTC
TTTGCCTCGTAGCTCGCTCGGGATGTACTGATCTAGCACTGATGAAGGCAGGTTTATGTTCTTCTCCACCATCTTATGTG
CCTTGGCTACAATGTGCATAGCTGTGGTAGCTAGCGTCATCAGAATCAACTTTTTATAGGCTCAGATCAGAAGGAAGGTC
GTCAAGTGAAGTGGTGATGGTGTTGGATTATATACCTTACTTAGTCTTATTTCCTACTGGGCTTGGGAGTGGAGTATAGC
ATTTAACTTTACACCCTTGTATAAGATATGCCATATGTATGTTTGCTTTTGTCAATTGAATTCAAGTTAGCATTCTGGCA
ATAGCAATAACATGATGTAAGGGCCATGGAATCGAATGCCGGTAAGCTGGTCGGTGTTGCAAGATGTTTTAGATCTTGTT
TGATATTGACAGAAAGAAAATTGCAGGGTCCTTGTTACAGCATAGCAGCATGCCATGTTTTCTTCCTCTTTTGCTCATTG
TGTTGTGTGCCGTTTCTTCCGCCAGAAATCCTAAATCTATGGGTATCCTTTGCTGCTCACTTGAATTCTAATCCGTC---
-TTCACGTTCTTCATTTCTTAAAGCTGTGCTTATGTTTTTGAAAGGCTACAGAGGTTGCTTATTTTCAGGTTATTGTAGA
AATCATATTATTCTGCTGGGTAAATCAGATCATCGTTATGTCATCTAAGGATGTCCTATCGCATTTCCTTTCTTATGTTT
AAGAATGAAGCAATATATA-AATAGCAGCTTGATGCCTTGATTAAGAAAAGAAGCCCCAAAGCCGAATACCCAGCATCTA
AATTCTGCTCAACTGTAAGGGGATTATCATAACCCCAGGCACCAAACCGAATCTAAGTTGAATGAATTGTGGTCCTTATT
CCACTAGCACTGGTACCAAGTTAAATGGAAAAGTATATCTGGGGTGTCTATTTGCAGTTGGAGGGAAGGTGTATCTGTTT
TAAATTCATAACGAAGCTAAATATACAAGATCACTTAACCAGAAGCAGCCTTAACTAC----------------------
-----------TCA-AAAGCTAATTTGGTTCCAGGCCATGGCATAC----------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr4B_1
GAATGTACAAGTCTGACAAGATCCTTCTGCTAATTGTGATGCTGTTGCTTTCAGATGGAAACTAATTGAAGGCCCCATCG
AGTCGAGTCCAGACCATGCATCATGTGCAAGGTTATGCACAATGATGGTGCTGAATAGCAAGGTGGACATGAGCATTAGC
TAGCAGAAGCTGGTAGGTAGTACAATCCAAAGCAAAGCACAAGCACAAGCACAAGCAGCAGCAGGTCGGTCGACCGATCG
ATCGATCATAAGAGAAAGTTAGCGTGCGTGCATGCATGCATGCATGCATCGGTGGAAATTATCATTCATGATGCACTGCA
TTCTTGGGAATATTATGATTATGCTCATATCCTGGTCCATCCAGCTAATTATTTGCTATGCCGATGCATCAATTTCACCT
ACTC------------TTGTGTTTATCATTCATTCACTGGTCACTTGTAATTAGAGGTGTTGGCATGCATGTTTTGTTAC
CCTACCCTTGGGATTTGTTTGTCTGGCCAAAGTCGAACTAGACACAGATGTGGGATTGTATGAAGTGAAATGTTAAAGCA
AATGAAGAATGGAATGGAAACAAACAAATGTAAGTTCTTCTGGAATGTGCAACAAGAGTCCAAGATGGGGGAAAGGGTAA
AGCAAAAGA----GAAGAGGGACGGGGGCAAGAAAGGAAAAGTGAAAAAGAAAAGGAAAGGAAAGAGGTCGCCATCACTG
CCTCTGCCTGATGAGGTCTGTCTCTTTTGCCTGCTCAGCTCATCCCCTCTCCCAGTTGA-------GCTCAAACAGCAGC
ACCACTCTAGAACGCAACACCAACAGGAGGGGGGTAGGTTCTCCTCTCAATAGATACAAGAATACAACACAAGAGTCTTC
CATTCCACTCCTCATCTTGTCTTTCTCCCACATCACAGCGTCGCAAGTTTCTTTCTTCTCT----------TCAGACAAA
AACATCAGTCCTCCTCTTCTTAAGTAGGAATTCAGTTCGTCAATGCTGCTGCCTCCTTGCCCTTGCCCTTGCCCTTGCCC
TTGATAGATATAGATAGACGAGTGAAGTGAGTGAGCAGTGCGTGAGCGGGGATGGATCAGCCGGTGCCCTCCATCTGCGG
CCTCCACCCGGGCATCGCCGTCACCGGCTTCTGCTCCGCCTGCCTCCGCGAGCGGCTCGCCGGCCTCCACCCCAGCGACC
CCGCCGACTCGGCGGAGCTCCGCCGCTGCAAGTCCTTCTCCTACGCCCGCTCCGCCGCCGCCTACTTCGAGCCGCAGCGC
CGCTCCTGCGACGCCCGCGGCGCCGCCGCCCTCTTCCACCAAGAACCAACCTACCTCCCGGGAGAGGAGGAACATCTTCC
ACCATCAGCGGCGGGCAGGCCCATGAAAGACCACATCCACCATGAGTCCTCCTCCAAGAAGGCCGCCGGCACATTCGGGG
GGTTGGGCAAGAAATGGCAGGAATGGCGCCGCAAGAACAAGCTCAAGAAGCAGGAGCAGGGGCCCATCGCCAGCAGGGCC
GCCATGCCGCACGAGAATCTCCGGCACCGCAGCTTCCGCGACACGCGCTCCGAGGTCGCCGCCGACGCGCTCGGCCGGCG
CTCCGTCGATGTGGACACCCTTCTCTCCATGGACCCCGGCCGCATCTCGGTGGATGAGCCCCGAGCTTCTTGTGACGGCT
ACCACGGCGTACGGTTGCGCATTCCCCCGATGCTGTCCCTGGTGGAGGATGCGCCCGTCCCACGCTCTGATGGCCAAATC
CCTGTGGAGGAAGACGAGGACACTGAGCCCGGAGGCTGCGCCCAGACAAGGGACTACTACTTGGACTCCTCCAGCTCCAG
CAGGAGGCGCCGGAGCGTGGACCGCTCCTCCTTCTCCAGCCGCAAGTCATTCTCTGATGCCAGTGACCTGCCCAGGATGA
TGGCTGGTGCCACTGCCAATGCCAATGCCCGGGTTTCACCGGCCATTGGTGCCGAGTTTTATCAGTACCACCACGCTCAG
AGTCAGAGTGTTCTTGACCATAACCAGCAGTGGGAGCAGGGACCGAATTCTTATTCTCTCCGGGATGATGATATGTCAGG
GAGCATTGATCCGGCGGCATTCCGGGATGGCATCCCTCTGCCGGCCAAGAAGTCTAAGAAGTGGATCAAGGGTTGGAACA
TCTGGGGTCTCATACATAAGAAGAGCAGCACCAAGGAATCTGAAGCAGCCAATTTGGCCAACAGATCATTCTCGGAGAAG
TGGCCCGAGCTCCGCACAAGGGGATACAATGGTCAGATGCTCAGGTGCAACAGCAGCGTAAGCGCGAGGAGCTCCTTCGG
CAATAGCGGAGCAGCAATGGGCGGCGTGAGCGGGAGGAGGAGCAATGTGGAAATGCATGTTAATGGCTTAGGGAGGATGA
GGAAGGATGAGGTTTTACTCGAGAGGAATTTCAGTGCAAGGTACACGCCTTGCACGGTTGATAATGGCGCGATCCCTTAT
CCAATCAGAGGTGCCCAGTTCAATCGGCGAAATCAGAATGGGATGCCCGGGAAAGGAAGGCCTGCTCGTTCATCCAATTC
TTTGCCTCGTAGCTCACTTGGAATGTACTGATCTAGCAGTGATTAAGGCAGGTTTATGTTCTTCTACATCTTCTTATGTG
CCTTGGCTACAATGTGCATAGCTATGGTAGC----GTCATCGGAATCAACTTTTTATAGGCTCAGATCAGAAGAAAGGTT
GTCAAGTGAAGTGGTGATGGTGTTGGATTATATACCTTACTTAGTCTTATTTCCTACTGGGCTTGGGAGTGGAGTATAGC
ATTTAACTTTACACCCTTGTATAAGATATGCCATATGTATGTTTGCTTTTGTCAATTGAATTCAAGTTAGCACTCTGGCA
ATAGCAATAACATGATGTAGGGGCTATGGAATCGAATGCCGATAATCTGGTTAGTGTTGTAGGATGTTTTGGATCTTGTT
TGAGATTGACAGTAAGAAAATTGCAGGGTCCTTGTTACAGCATAGCAACATGCCATGTTTTCCTCCTCTGTTGCTCCTTG
TG--GTGTGCCGTTTCTTCCTCCAGAAATCCTAAATCTATGGGTATCTTTTGCTGCACACTTGA--TCTAATCCGTCACA
TTTCACTTTCTTCATTTCTT-AAGCTGTGCTTATGTTTTTGAAACACTACAGAGGTTGCTTATTTTCAGGTTATTGTAAA
AATCATATTATTCTGCTGGGTAAATCAGATCATTGTTATGTCATCTAATGATGCCCCATCGCATTTCCTTTCATGTTTCA
------GAAGCAATATATACAATAGCAGCTTGATGCCTTGATTAAGAAAAGAAGCCCCAAAG-CGAATACCCAGCATCTA
AATTCTGCTCAACCGTAAGGGGGTCATCATAACCCCAGGCACCAAACCGAATCTAAGTTGAATAGATTGTGGTCCTTATT
CCACAAGCACTGGTGCTAAGTTAAATGAAAAGGTATATCTGGGGTGTCTATTTGCAGTTGGAGGGAAAGTGTATATGTTT
CAAATTCGTAACGAAGCTAAATATACAAGATCAATTAACCAGAAGCAAAACACACATTTGTATGCAACCAGAAGCAGCCT
TTAACTACTCATCA-AAAGTTAATTTGATTCCAGGCCATGGCATACAAAACAAGGTTCAGTATGTCTCAGCGGCAACCCT
AAGAACAT------------------------------------------------------------------------
-------------------------------
>SNPs
---------------------------------------S----------------S--------------------S--
-------------------------------S------------------------------------------------
-------------------S----------S-------------------------S-----------------------
---------------------------------------------S----------------------------------
-------------------------------------------------------------------------------S
----------SSS----------------S--------------------------------------------------
---------------------------------S------------------------S---------------------
-------------------------------S----S-------------------------------------------
------------S---------------------------------------------S---------------------
-------------------------------------------------------S----SSSSSS-------------S
-SSSSS-S------------------------------------------------------------------------
------------------------------------------S------------------------------------S
--------S--S---------------------------S-----------------------SS---------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
---------------------S-S--------------------------------------------------------
------------S-------------------------------------------------------------------
---SS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
S------------------------S------------------------------------------------------
-S------------------------------------------------------------------------------
----------------------SS--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S--------------S--------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-----------------S----S-------------------S-----------------S------
--------------------S-----------------------------------------------------------
----------------------SS--------------------------------------------------------
----------S---------------------------------------------------------------------
S---------------S---------------------------------------------------------------
-----------S--------------------------------S-----------------------------------
-----------------------------------------------------------------S--S-----------
----------------S---------------------------------------------------------------
--------------S-------------------------------S-----------S--------SS--S------S-
----S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_57
-------------------------------------GGCGCTGTTGCTTTCAGATT-----------------------
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-------------------------------
>reverse_1763
--------------------------------------------------------------------------------
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--CGTGGAGGAAGACGAGGACA----------------------------------------------------------
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-------------------------------
>forward_1635
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------CACCCTTCTCTCGATGGACG---------------------------------------------
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-------------------------------
>reverse_2504
--------------------------------------------------------------------------------
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-----------------------CCGGCGAAATCAGAATGGGA-------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>forward_1763
--------------------------------------------------------------------------------
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---------------------------------------------------------------GCTCTGATGGCCAAATC
CCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>reverse_3766
--------------------------------------------------------------------------------
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-----GGGTTGAAAAACAGGGGCAA------
