>input_sequence_46418
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-------------------------------------------------------------------------ATGACGG
CGGCCTCGAGGCTGTCCTACAGGAACGCCACCGTCGCCCTGTGCGCCATCAATGTCCTCGCGGTGGCGCTCCTCCTCCGC
AGCCACTTCTCGTCCTGGCCGCGGATCGCCGGCGGCCACCGGTTCGATTCAGGTACGGGTTCGTGATCCCCAGCTTATTT
CACACCGTAGGAGAACCTGGTCCGCCGGTGGAACCGCCAGGGTGGAGAAATCCGGTCGATTTGGTACCAAATTTAGCGCG
ATCCAGTGGCCACCCGGCGCGGTAAATCTGTGCAAATCGCGAGCATTTCTCTTCAGTCC-AAGTAATTGTAGGGTATGAA
CTTTGGATTAACGCTAAGAAAAACGAAATGTGGGTCTGCTCGTTGCAAACA-----------------------------
---------------CTAC----------------------------------AAATGATAGATTCATATCATGGGTGAT
AACTTCCTTTGTAC-------------------------------------------------------------TAGAA
AGTAGATCATGCAGCTGCAAATACTTCACTATCCCTTGATTATTCAGCTGAGTGGGAAGACCGGGTGCTACTCTTTGGCA
GCTCAGCTACGGTACATATGGGAGTCTGAAGAGTTGCGCCGTGCTATGGAGCCTGTGGATTTGATTAGGAGAGTAAGTAA
ATGTA---------------------CAGTTTGTTCCTCCGTTTCTCATGATATGAAGAAAGAAAGAATATGCACTGCAT
TGCTAAACCAAAAGAAAAGAAGAAATAGACTCGATTGGTAATTCTCATTGATCACAACATTATGACATAGGTGAAGGAAA
TTGAGCAAGAAGCTTATGGAGAGCCTGGCATGTCAACAACGCAAGAAGGGACGGCTGCTGTTGACTTATCGAAAAGGTTG
AAAGATTTACGGCAAGGGAATGACGGCAGCAGCCAAAGAGGTTATTTGACCCATCGAAGTCTCTTGTCTTTGCTGCA---
--------------------------------------------------------------------------------
-TATTTAGGGGCACA-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CTGAACAGTCGGCAGAATA---------ATCTGT
ATTGTTTGAACCTTGACGCTTTGGTACTTGGTTTTACATGTAAC--TGCTTTGAAATGGCATTATATAGCTGTCTACCCA
TATTGGTCCAGCAGCTTGCTGCAAGCTCACATGTTTTAAGAATAATCTTGTTTATTTACCAAGGCACCGGATCCACAGGA
CAACGATTTTTCTCTGTTTACATTTGCTGGCCATT--ATTGTGGCT-----CAGCATGACATCCACACTCTATGGAATGG
AATAGAAGACTGGTTGCACAGTAGAATTGTCAGCCAAACTGAATCTGCAAATA---------------------CTTAGA
GGTTAGAGCGCTTCATCACAGCACCCACAAT---GTGGAACATTGTAATTAACATCTGCAATGCTTTACTATCATTAATC
CTAGGCTGGTCTTG----------CATTCCATTCTAGCCTGTCA-ACGGCTGTAAAGGCAAACGCATGAACACATGATTG
ATGCAAAATTATGCATACATT----TATGTTGTTCTCAGCAGGAAGTAATGTTTTTTT---CA-AGATGCATACTCTTGG
GCACT------ACTGCTATGTGGTTTGTAAGGCATGGACTGCTTTTTTTGTTTTGACATCAT------------------
-----------------------CTTGTGTACCTTACTTGGTATATAGTCTGTAGAAACTGATTATTTCCGTAC------
--AAACATGTGCAGCCCTGGAGGAGTGGCGCAAGCGGAAGATGGAGCGGGCGAGGCAGCGGGCGATCGAGAAGGACGGGA
TGATGCCCGGTGCAAAAACACCTTGA------------------------------------------------------
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>chr6A_1_TraesCS6A01G389200
AATATTTAAGATGTCGAGTTGCACAGTATGACCAGTAGGCAGGGCATCGATCATTCGGACAACTTAATTAGACACCAGTA
GGCAAATGCAACATGCGAGATACATGATCTG-AAAAACTAAGCATCAAGGCTGCGGTCATGGCATCA---CCGCATTGCG
CACCACCTCTCTACTATGGCCGCACGAAGAGATCGACACATCAACGTAATCCAACAAACACAGAAATGAAATCGGCAGGC
CAAACCTAGAGCGTCAAACGCCTACCACCAGTACAACAATGGAATACCCCAACGCATTCAATCAGAGTTCCGAGGAGAAA
TGGTTAAGCTG--TCACCTCACGGACGACCTCCCTCCGGTGCCCTTGCGGACGAGATGCCCGGCGCCCTTGACGGCCGGC
GCCCGCGCGGACATGTACCTCGCGCCATCCGCCCCGCCCAACCCTGCAATCCAAACCGAACCACCGGTGAGATCCGCCCT
CCCATGCCACGCGCGGGGAGGCCGACGGGTGGCCACGGGGAGATCCCTCCCCGGGCCGCGCGCATCTCGGCCGATGCGTA
CG--TACCTTGGGGCCCGAGCGCCGGCTGGGCGGCGGATCTGAAGGCGGCGATGGCGGCCGAGGAGGCCGGGGAGAGGTG
GTGCTGGTCGAGGAGGTGGCGCCGCGTCGCCGCCGCCGCCGCCTGCATCGTCGCCGCCGTCGGTGGTGGTCGTCGGAGTC
GGACGAGGGGAGGGAAGAGGAGGCCGAGACCCGAGAGCTGTGGTGTGTGGTGAGAGAGACGTAGGCTGGGTC-----GGA
ATCTAGTTGTTGCTGGCCCAACTGAGCTCAACTTATATGGGCCAGAAGGGCCCCGCGGGATTGGATCTTTACTGGGCCGG
AGCCCATTTGGTGATGCGCAT---CTCTAAAGCGAACCACCGTGCTCCGGTTGGTGGGGTGGGCCTCCTCGTCCGCTTCC
TCCTCTTCTGGTCCT--TCTTCTCCGGCGAGCTCTGCGCCACCGGT---------------GCCGTCGGCGGGATGACGG
CGGCCTCGAGGCTGTCCTACAGGAACGCCACCGTCGCCCTGTGCGCCATCAATGTCCTCGCGGTGGCGCTCCTCCTCCGC
AGCCACTTCTCGTCCTGGCCGCGGATCGCCGGCGGCCACCGGTTCGATTCAGGTACGGGTTCGTGATCCCCAGCTTATTT
CACACCGTAGGAGAACCTGGTCCGCCGGTGGAACCGCCAGGGTGGAGAAATCCGGTCGATTTGGTACCAAATTTAGCGCG
ATCCAGTGGCCACCCGGCGCGGTAAATCTGTGCAAATCGCGAGCATTTCTCTTCAGTCC-AAGTAATTGTAGGGTATGAA
CTTTGGATTAACGCTAAGAAAAACGAAATGTGGGTCTGCTCGTTGCAAACA-----------------------------
---------------CTAC----------------------------------AAATGATAGATTCATATCATGGGTGAT
AACTTCCTTTGTAC-------------------------------------------------------------TAGAA
AGTAGATCATGCAGCTGCAAATACTTCACTATCCCTTGATTATTCAGCTGAGTGGGAAGACCGGGTGCTACTCTTTGGCA
GCTCAGCTACGGTACATATGGGAGTCTGAAGAGTTGCGCCGTGCTATGGAGCCTGTGGATTTGATTAGGAGAGTAAGTAA
ATGTA---------------------CAGTTTGTTCCTCCGTTTCTCATGATATGAAGAAAGAAAGAATATGCACTGCAT
TGCTAAACCAAAAGAAAAGAAGAAATAGACTCGATTGGTAATTCTCATTGATCACAACATTATGACATAGGTGAAGGAAA
TTGAGCAAGAAGCTTATGGAGAGCCTGGCATGTCAACAACGCAAGAAGGGACGGCTGCTGTTGACTTATCGAAAAGGTTG
AAAGATTTACGGCAAGGGAATGACGGCAGCAGCCAAAGAGGTTATTTGACCCATCGAAGTCTCTTGTCTTTGCTGCA---
--------------------------------------------------------------------------------
-TATTTAGGGGCACA-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CTGAACAGTCGGCAGAATA---------ATCTGT
ATTGTTTGAACCTTGACGCTTTGGTACTTGGTTTTACATGTAAC--TGCTTTGAAATGGCATTATATAGCTGTCTACCCA
TATTGGTCCAGCAGCTTGCTGCAAGCTCACATGTTTTAAGAATAATCTTGTTTATTTACCAAGGCACCGGATCCACAGGA
CAACGATTTTTCTCTGTTTACATTTGCTGGCCATT--ATTGTGGCT-----CAGCATGACATCCACACTCTATGGAATGG
AATAGAAGACTGGTTGCACAGTAGAATTGTCAGCCAAACTGAATCTGCAAATA---------------------CTTAGA
GGTTAGAGCGCTTCATCACAGCACCCACAAT---GTGGAACATTGTAATTAACATCTGCAATGCTTTACTATCATTAATC
CTAGGCTGGTCTTG----------CATTCCATTCTAGCCTGTCA-ACGGCTGTAAAGGCAAACGCATGAACACATGATTG
ATGCAAAATTATGCATACATT----TATGTTGTTCTCAGCAGGAAGTAATGTTTTTTT---CA-AGATGCATACTCTTGG
GCACT------ACTGCTATGTGGTTTGTAAGGCATGGACTGCTTTTTTTGTTTTGACATCAT------------------
-----------------------CTTGTGTACCTTACTTGGTATATAGTCTGTAGAAACTGATTATTTCCGTAC------
--AAACATGTGCAGCCCTGGAGGAGTGGCGCAAGCGGAAGATGGAGCGGGCGAGGCAGCGGGCGATCGAGAAGGACGGGA
TGATGCCCGGTGCAAAAACACCTTGAAG----CGTATACGTGTGCTACAAGCGTTCCAGAACA---------CG-GGGGC
GGCACTGGTATTCTTCTTCTCCTGCTTA-G-------CCCCCGGGGTTGCCGCGGCGGTAAATAACTACGATGTTCATC-
--GGTCTGTTGAAGGGACAGTAGCCGCACGATCTTCTGTCATCCA--------------TGTAAAATCACCTGTAACACA
CGCTGCTGT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------GTTGGAGACG-AAATGAACGAAGTTTAGCTAGTACGTACTAT-----AACAGAAAAGAAG
GCAAATCGCTGTGTGGTGTGGTGCTGTGTTGTTAGATTATGGCAGTGGAAGAGAAGTGACTAGT---------------T
GTTCATGGGAAAGCTACGTTGCCGTGGAT--TTTTGGCAGCCTCTGTG----------TGGAGCAGTGGCATTGTCCTCT
GCTGGTGCTTGGCTTTGGCAGGCGAGTTGTGGTTGGGTGCCTGCCTAA------------------------AACGTTCG
AATCAGGCGCGGACACATCG-------------------------------------------------CGCGCCACGAG
TCTTTGCG------------CCGTCCGTCCATGCGTTCGCCGTGGGA-----CGGGACAGCCACAAGCGC--CGCCCGCG
CGCGTGGATGCGCCCCAGCCCACCCGCTCGCACCCTCCCCGTCACCCGCAAAGGCACAAAGAGAGGAGGGGAGGGGACTG
GAGGAGCGACGACCGCCTGCCGCGCTTTTTCCACCGCTCCATCGGTTACCACTTACCTCCACTGCTACTCTCTCCCCTCT
TCCTTCTCTT-----------------------------------------------------------------CTACC
TCCGCGTCTCGGGGTCTCACTCCCGC---------------------------------------CCATGGAGGCCGCCA
CG---------------GCGCCGCACCTGCTGCAGTGCGGGGGGTTCGGCCGGGGCCGGGTCGTGGCCGGGCTCGTCTCC
CCGCTCCCGCGCCGCTCCACGCACCAACACCAGCGCCGCCTCCGCCGCGTGCTCGCCATCGCCACCGAGCCCAGGCTACC
CCCTCCCTCGCCGCCGGCCCCGCCCCGCCCCGGCAGGACCAGGGCTAACACCATCCAGTCCACCGTAAGCCCCCTACTGC
CACAGGGTCTCCTCAGCCGCGCCTTCTTAATTACTTACTT
>chr6B_1
AATATTTAAGACGTCGAGTTGCACAGTACGACCAGTAGGCACGGCATCGATCATTTGGACAACTTAATTAGACACCAGTA
GGCAAATGCAACATGCGAGATACATGATCTGAAAAAACTAAGCATCAAGGCTGCGGTCATGGCATCATCACCGCATTGCG
CACCACCTCTCTACTATGGCCGCGCGAAGAGATCACATCATCAACGTAATCCAACAAACACAGAAATGAAATCGCCAGGC
CAAACCTAGAGCGTCAAACGCCTACCACCAGTACAACAATGGAATACCC-AACGCATTCAATCAGAGTTCCGAGGAGAAA
TGGTTAAGCTCTCTCACCTCACGGACGACCTCCCTCCGGTGCCCTTGCGGACGAGATGCCCGGCCCCCTTGACGGCCGGC
GCCCTGGCGGACATGTACCTCGCGCCATCCGCCCCGCCCAGCCCTGCAATCCAAACGTAACCACCGGTGAGATCCGCCCT
CCCATGTCGCGCGCGGCGAGGCTGGCGGGCGGCCACGGGGAGATCCCTCCCCGGGCCGCGCGCATCTCGGCCGATGCGGT
ACGTTACCTTGGGGCGCGAGCGCCGGCTGGGCGGCGGATCTGAAGGCGGCGATGGCGGCCGAGGAGGCCGGGGAGAGGTG
GTGCTGGTCGAGGAGGTGGCGCCGCGCCGCCGCCGCCGCCGCCTGCATCGTCGCCGCCGTCGGTGGTGGTCGTCGGAGTC
GGAGGAGGGGAGGGAGAGGGGGAGG-----CCGAGAGCTGTGGTGTGTGGTGAGAGAGACGTAGGCTGGGTCGGGTTGGA
ATCTAGTTGTTGCTGGCCCAACTGCGCTCGACGCAGTTGGGCCGCATGGGCCCCGCAGCGTTGGAACATTACTGGGCCGC
GGCCCGTTTGGTGACGCGCATCTCCTCTAAAGCGAACCACCGTGCTCCGGTTGGTGGGGTGGGCGTCCTCGTCTGCTCCC
TGCTCCTCCTCCTCTGGTCCTCTACGGCGAGCTCTGCGCCACCGCCCCCACCGTCGCCGGCGCCGTAGGCGGGATGACGG
CGGCTTCGAGGCTGTCCTACAAGAACGCCACCGTCGCCCTGTGCGCCATCAACGTCCTCGCGGTGGCGCTCCTCCTCCGC
AGCCTCTTCTCGTCCTGGCCGCGGATCGCCGGCGGCCACCGGTTCGATTCAGGTAACGAATCGTGATCCCCAGCTGATTT
TACACCGTAGTAGAACCTGGTCCGCTGCTGGAACTGCTAGGGTCGAGAAATCCGGTCGATTTGGTATCAAATTTAGCGCG
ATTCAGTGGCCACCAGGCGCTGTAAATCTAGGCAAATCGCGAACAATTTTCTTCAGTCCAAAGTAACTGTAGGGTATGAA
CTTTGGATTAACGCTAAGCAAAATGAAATGTGGGTCTGCTCGTTGCAGACA-----------------------------
---------------CGAGCACTGGGAAAGATTAGACCCATTTCTTCCACTAGAAATGATAGATTCAAATCATGGGTGAT
AACTTCCTTTGTACTCCCTCCGTCCCAAAATGAAGTTGTGCTAAGGTTAAGGCACTTATTTTGGAACGAAGGGAGTAGAA
ATTAGATCATGTAGCTGCAAATACTTCACTATCCCTTGATTATTCAGCTGAGTGGGAAGACCGGGTGCTACTCTTTGGCA
GCTCAGCTACGGTATATATGGGAGTCTGAAGAGTTGCGCCGTGCTATGGAGCCTGTGGATTTGATTAGGAGGGTAAGTAA
ATGG---------------------ACAGTTTGTTCCTTTGTTTCTCATGATATGAAGAAAGAAATAATATTCACTGCAT
TGCTAAACGAG-----AAGAAGAAATATACTCGATTGGTAATTCTCATTGATTACAACATTATGACATAGGTGAAGGAAA
TTGAGCAAGAAGCTTACGGAGAGCCTGGCATGTCAGCAACGCAAGAAGGGACGGCTGCTGTTGACTTATCGAAGAGGTTG
AAAGATTTACGGCAAGGGAATGACGGCAGCAGCCAAAGAGGTTATTTGACCCATCTCAGCCTCTTGTCTTTGCTGCT---
--------------------------------------------------------------------------------
-ATCTAGGGGGCACACGTTGCTTTCTACCACATCGTTTTAAACGAAGTTTTACCATAACAAACATTCCTCTTTTCATTGC
AAAGTGGTATAGAGAATTGATCCAATATGGATGGAATCATGAATAGTCATTGGTTTAGTTTTTTTATACTAATTAAAACT
TGCTATCTATGGAGCAATATGGATAAAAGAAAGTAAGTATTTATCTCTGAACAGTCGGCAGAATA---------ATCTAT
ATTGTTTGAACCTTGACGCTTTGGTACATAGTTTTACAAGTAACAGTGCTTTGAAATGGCATT-TATAGCTGTCTACCCA
TATTGGCTCAGCAGCTTCCTGCAAGCTCACATGTTTTAAAAATAATCTTGTTGATTTGCTGAGGCACTGGATCCATAGGA
GAACGATTTCTCTCTTTTTACGTTTGCTGGCCATC--ATTGTGGCTTCCACTAGCATGACATCCC----CTATGGAATAG
AATAGAAGGCTGGTTGCACAGTAGAATTGTCAGCCAGACTGAATCTGTAAATA---------------------C-----
--TTAGAGCGCTTCATCACAGCACTGTCGACAATGTGAACCATTGAGATTAGTGTTTGCAATGCTTAACTATCATGAATC
CTAGGCTGGTCTTTTGTGCTCCGTCATTCCATTATAGCCTGTCA-ACGGCTGCAAAGGCAGACGCATGTAAACATGACTG
ATGCAAAATTATGCATGCATT----TACATTGTTCTCCGCAGGAAGTAATATATTTTTTTCCCAAGACTATCATTCTTGC
GCACT------AGTGCTATGTGGTTTGTAAGCTATGGGCTACTTTTTATTTGCGGGTTGCTGCTTTGTGCATCTGATAGA
GACAGTATGCAGCAACCAA-ATGCTTCTTTACCTCGCT---TG-GTAGTCTGTGGAAACTGAATATTTCCGCAC------
--AAACATGTGCAGCTCTGGAGGAGTGGCGCAAGCGGAAGATGGAGCGGGCGAGGCAGCGGGCGATCGAGAAGGACGGGA
AGATGCCCGGTGCAAAAACACCATGAAG----CGTA--CATTGGTAGTACAAGCAAATCCAGAACACAAGGGTG-GGGGG
GTGGGCGGTATTCTTCTTCTCCTGCTGCTGCTTAGCCCCCCGGGGGTTGCCACGGCGCGTAAGCAAC--CATGTTCATC-
--GGTCCGTTGAAGGGATCGTAGCCGCACGACG--------------TTCTGCCGTGCCTGTAAAATCACCTGTAACACA
TACTGCCGC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------GTTGGAGGCGAAAATGAATGAAGTTTAACGATAACAGAAAAGAAAAGAAAAGAAAAAAGG
GCAAATCGCTGTTCCAGCAGTATGTGTTACAGGTGACAAAAGTGACTGC--------------T---------------T
GTTCATGGGAAAGCTACGTCGCCGTCGAT--TTTTGGCAGCCGAGTTGGTCTGGACCCTGGAGCAGCAGCATCGTCCTCT
GCTGTCGTGGACTGATG--------------------AGCTTGCGGGAGAGTTGTGGTGGGGCGTCTGCCTGAAGGCTCG
AATCAGGTGCGGACACGTCCGGGGCGA---------------------------------GTGGCGGGGCGGGCCACGAG
TCTTTGCG------------CCGTCCGTCCATGCGTTCGCCGTGGGACGGGGCGGGACAGCCACAAACGCGGCGGCCGCG
CGCGTGGACGCGCCCCCGCCCACCCGCACGGCAC----------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr6D_295
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------CAATCAGAGTTCGGAGGAGAGA
CGGTTAAGCTTTCTGACCTCACGGATGACCTCCCTCCGGTGCCCTTGCGGACGAGATGCCCGGCCCCCTTGACGGCCGGC
GCCCTCGCGGACATGTACCTCGCGCCATCCGCCCCGCCCGACCCTGCAATCCAAACCGAACCGCCGGTGAGATCCGCCCT
CCCATGTCGCGCGCGGCGAGGCTGACGGGTGGCCCCGGGGAGATCCCTCCCTGTGCCGCGCGCATCTCGGCCGATGC-GT
ATGTTACCTTGGGGCGCGAGCGCCGGCTGGGCGGCGGATCTGAAGGCGGCGATGGCGGCCGAGGAGGCTGGGGAGAGGTG
GTGCTGGTCGAGGAGGTGGCGCCGCGCCG---CCGCCGCCGCCTGCATCGTCGCCGCCGTCGGTGGTGGTCGTCGGAGTC
GGAGGAGGAGGGGGAGAGGGGGAGG-----CCGAGAGCTGTGGTGTGTGGTGAGAGAGACGTAGGCTGGGTCGG-----A
ATCTAGCTTTCACTGGCCCAACTGAGATCAACGCGGTTGGGCCGGATGGGCCCCGCGGCGTTGCATTTTTACTGGGCTTC
GGCCCATTTGGTGACGCGCAT---CTCTAAAGCGAACCACCGTGCTCCGGTTGGTGGGGTGGGCCTCCTCGTCTGCTCCC
TGCTCCTCCTCCTCTGGTCTTCTCCGGCGAGCTCTGCACCACCGGCCCCGCCGTCGCCGGCGCCGTAGGCGGGATGACGA
CGGCCTCGAGGCTGTCCTACAAGAACGCCACCGTCGCCCTGTGCGCCATCAACGTCCTCGCGGTGGCGCTCCTCCTGCGC
AGCCACTTCTCGTCCTGGCCGCGGATCGCCGGCGGCCACCGGTTCGATTCAGGTACGGAGTCGTGATCCCCAGCTGATTT
TACACCGTCGGAGTACCTCCTCCGCCGCTGGAACCGCTAGGGTCGAGAAATACGGTCGATTTGGTACCAAATTTAGCGCG
ATTCAGTGGCCACCGGGGGCAGTAAATCTAGGTAAATCGCTAGCATTTCTCTTCAGCCCAAGTAATTGTA--GGCATGAA
CTTTGGATTAACGCTAAGCAAAACGAAATGTGACAGCACTGGGAAAGGTTAGACCCTTCTATAATAGAATTAGCTGGCTT
ATACCGTTTCTCCCGCTAC----------------------------------AAATGATAGATTCATATCATGGCTGAT
AACTTCCTTTGTACT----------------------------------------------------------AGTAGAA
ATTAGATCATGTAGCTGCAAATACTTCACTATCCCTTGATTATTCAGCTGAGTGGGAAGACCGGGTTCTACTCTTTGGCA
GCTCAGCTACGGTACATATGGGAGTCCGAAGAGTTGCGCCGTGCCATGGAGCCTGTGGATTTGATTAGGAGAGTAAGTAA
ATGTACAGTTTGTTTCTTCATTTCTACAGTTTGTTCCTTCGTTTCTCATGATATGAAGAAAGAAAGAATATTCACTGAAT
TGCTAAACCAA-----AAGAAGAAATATCCTCTGTTGGTAATTCTCATTGATTACGACATTATAACATAGGTGAAAGAAA
TTGAACAAGAAGCTTATGGAGAGCCTGGCATGTCAGCAACGCAAGAAGGGACGGCTGCTGTTGACTTGTCGAAAAGGTTG
AAAGATTTACGGCAAGGGAATGACGGCAGCAGCCAAAGAGGTTATTTAATCCATCCCAGTCTCCTCTCTTCACTGTCTAT
TTTTTTTGGAAATGGAGGCATGCCCCCGGCCTCTGCATCATGATGATGCATGCGGCCATCTTATTAACAATCTTCACTGT
CTATTTAGGGGAATG-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CTATGCATTTGGCAGAAATAACTCTCTGATCTAT
GTGGTTTGAATGCTATCATCTTGTTGTCTCTACCCATCCTTTTGTCTTAGCATGTCAAGGTTATTAT------------A
TGTTGGTTCAAAAGCTTCCTGCAAAGT------TTGTAAAAACAGTCTTGTTGACTTATCAGTGCACTGGATGCACCGCA
TAATTAGTTTTCTCTGCTTACATTCGCTGCCCATT--ATTGTGGCCCGCGGCATAACATCATACTCC---------ATGG
AACAGAAGACTGGTTGTGTTGTAGAATTGTCAACGGAACTGAATCTGCTGATAGTACACTCGGACAGGGGATAGC-----
--TTAGGGCGCTTTGCCGCAGTACTGACAAC---CTGAAACATCGAACTTAGTATTCGTGATACTTCGCCGTCATTAATT
TTAGGCTGGTCTTTTATGCTCCGTCATTCCATCCTAGTCTGTCTGACGGCAGAAAAGACGGAGACAGGAAATCACGAATG
GCGCA-AATTAGGCATAC---------TGCTGTTCTCTCCAGGACGTAATGTTTTGTTTGGTCGAGATGTGCATTCTCAC
GACACTAGAGAAGTGCTATGTGGTCTTGAAGCCATGGACTGTTTTTT---------------------GCATTTGTTAGA
GAAGAGACACAAAGCAGCCGATGCTCTTGTGTCTGATT---TG-ATAGTCCGTAGAAGCTGACGACACCTTTTGTTTTGT
GAAAACATGTGCAGCACTGGAGGAGTGGCGCAAGCGGAAGATGGAGCGGGCGAGGCAGCGGGCGATCGAGAAGGACGGGA
TGATGCCGGGCGCAAAAACACCGTGAAG----CGTA--CGTGTACGACAAGCGTTCCAGGACA---------CAAGGGGG
GGCACTGGTATTCTTCTGCTTCTGCTTAAG-------CCCCTGGGGTTGCTGCGGCGAGTAAATAAT--GATGTTCATCA
GTGGTCTGTTGAACCGACAGTGGCCGCACGATCGTCTCACAGCGATCTTCTGCCGTGCCTGTAAAATCACCTGTAGCACA
TACTGCTGTGTTTTTTTTTTTGCGGGTTTAAAAGTAGTTTATTCCAAAGTAACAGGCTTACAGTCCGCTAATACAAGATT
ATGAATGAAGAGGGGTGGCCGTTGCAACCAACAAGCGGTGCTACGAGTCGTTCGGGCATAATTAGCAAGACAATGTGAGA
CCATGTTCTGTGATCTCAGGATCTTCACTGGTTTAAACTTCCTCTGTAGCATGTAGTTCTTGATCTCCCTGACCAATTGA
CCATTGGGTGATTTATCAAGTGAGGCATCAGTCATAGAAGAAAAGGCCACCATCGAGTCCGATTGTACTAAGACCGGAAG
GTTAGACCATTCGATAGCCATAGACATTCCAATCTTAATAGCTTGAATTTCCGCCTCGAGAGCATTGTTACAGTAGAACA
ATAGTTGACATGATGAAAAAATGACAGAGCCCAAGTTATCCCGTAGGAGCATGCCTGCTCCCGCTGAGCCCTCTTCCGCT
GAATAAGAAGCATCCACTGACAAGGCAAGCCGGCCAGGTGGTGGTGGCTGCCATGGTGTATCCGGGGGCACTGCCTTGAT
CGATCGGTACATACTGCTGTGTTGGAGACGAAACAAATGAAATGGAGTT----------------------GAACAAAAG
GCAAATCGCTGGGTGGTGCTGTGTTGATGGTTT---TTTTGGCGTTGGAACAAAAGAGACGGGCTCAACTTTGCTGTAAT
GGTCATGAGAAAGCTACGTTAATGTTGTCGATTTTGGCGGCCTCTGTTGGTGTTGGG---------------------CT
GCTGTGGACGACTGCCC--------------------TGCCTGCCTGA------------------------AACGTTCG
AATCAGGCGCAGACACATCGCGCGCGCACGGTTTACCTCTCCGTGCGGTCGGATGAGTGGGTGGTGGGACGCGCCACGAG
TCTTTGCGCCGTCCGTCCGTCCGTCCGTCCATGCGTTCGCCGTGGGT-----CGGGACAGCCACAAACGC--CGGCCGCG
CGCGTGGACGCGCCCCCGCCCACCCGTCCGCCTCCGCGGGCACA---------GCACAAAGAGTGGAGGAGCCACCACCG
G-----------------------------------------------------------------ACTCACTTCCCTCT
TCTTTCTTCCACCACCGCGGCCGGGCCCAACTTTTCCCCAGCACTCCACCTCGGTTACTACTTACCACTCACTCCCTACC
TCCACGTCTCCGAGCCTCCGTGCCTCCAACGCTACACCATCTCGATCGAACCTTCCCTCCTTTCACCATGGAGGCCGCCG
CGTCGGCGTCGGCGTCGGCGCCGCGCCTGCTGCAGTGCGGGGGGTTCGGCCGGGGCCGCGTCGTGGCCGGGCTCGTCTCC
CCGCTCCCGCGCCGCTCCACGCACCAACACCAGCGCCGCCTCCGCCGCGTGCTCGCCGTCGCCACCGAGCCCAGGCCGCC
CCCGCCCTCGCCGCTGGCCCCGCCCCGCACCGGCAGGACCAGGGCCAACACCATCCAGTCCACCGTAAGCCCCCT-----
----------------------------------------
>chr1A_1893
--------------------------------------------------------------------------------
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----------GCACA-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CTGAACAGTCGGCAGAATA---------ATCTGT
ATTGTTTGAACCTTGACGCTTTGGTACATGGTTTTACAAGTAAC--TGCTTTGAAATGGCATTATGTAGCTGTCTACCCA
TATTGGTTCAGCGGCTTCCTGCAAGCTCACATGTTTTAAAAATAATCTTGTTGATTTATCAATGCACTGGATCCACAGGA
TAATGATTTTTCTCTATTTACAGTCGCTGGCCATATCATGGTGGCT-----TAGCATGACATCCACACTCTATGGAATAG
AATAGAAGACTGGTTGCACAGTAGAATTGTCAGCCAAAATGAATATGCAGATA---------------------C-----
--TTAGAGCGCTTCATCACAACATTGATAGC---GTGAAACATTGAAATTAGTATTTGCAATGCTTAACTATCATTAATC
CTTGGCTGGTCTTTTCTGCTCCGTCATTCCATTATAGCCTGTCA-ACGGCTGCAAAGGCAGACACATGTAAACATGACTG
ATGCAAAATTATGCACACATTTACATACATTGTTCTCCGCAGGAAGTAGTATTTTGTTTCCCA-AGATGCGCATCCTTGC
GCACT------ACTGCAATGTGCTTTGTGAGCCGTGGGCCGCTTTCT---------------------GCATCTGATAGA
AACATAG---AGCAACTGA-ATGCTTCTGTACCTTATTACCTG-GCAGTCTGTGGAAACTGAATATTTGTGTAC------
-AAAACATTTGCAGCTGTGGAGGAGTGGCGCAAGCGGAAGATGGAGCGGGCGAGGCAGCTGGCGATCGAGAAGGACGGGA
TGATGCCTGGCGCGAGAACACCGTGAATGAAGCGTGCCCGTGTACCGCAAGCGTTCCATAACA---------TG-AGGGG
TGCACCGGTATCCTTCTTCTTCTTATGCATGCTTAG--CCCCGGTGTTGCCGCGGCACGTAAATAAT--GGTGTTCATT-
--GGTCTGTTGAAGGG----------------------------------------------------------------
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----------------------------------------
>SNPs
-----------S----------------S------------S-------------S------------------------
--------------------------------------------------------------------------------
-----------------------S----------SSSS------------------------------------S-----
-------------------------------------------------S------------------------------
----------S-----------------------------------------------------S---------------
----S---------------------------------------------------------------------------
------S-S-------S-----S-------------------------------------------------------SS
SS-------------S----------------------------------------------------------------
--------------------------S-----------------------------------------------------
---S-----------SSS--S-SSSSSSSS--------------------------------------------------
--------------------------------SS-SS------S--S-----------SS-------------------S
S-------------S----------------------------------------------------------S---S--
-S---S--SSSSS--------------------------------S--------------------S-------------
---------------------S------------------------------S---------------------------
----------------------------------------------------------SS---------------S----
S--------------------------S---------S-----S------------------------------------
--S-----------S-----S--------SS-------------------------------------------------
------------------S----------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S---------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------------------------------S--------
-----------SSSSS-----------S------------------------S---------------------------
-----------------------------------S--------------------------------------------
-------------------------------------------------------SS-------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------S-----------------------------------------
-------S---------S---------------------S------------S--------------S------------
S-------------------------------------------------------------------------------
---------------------------------------------------------------------------SSSSS
SS----------------------SS----S------S-------S-----SS--S----------S-------------
-------------S--------------------------------------S-------S---------S------S--
-------------------------------------S--------------------------------SS-S-----S
-------------------------------S---------------S-S-SSS-SSSS-SS------------------
--------------------------S-----------SSS-SS------------------S-----------------
---------------S----------------------------------------------------------------
----------------------S-------------SS-------S---------------------------------S
---------------------------------------------------------SSS--SS-S-SS-----------
---------------------------------S---SS--S-S------------------------------------
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------S-S-SS--SS-SS-S-------S------S---
------------------S----S---SSSS--S---------SS-----S-S---S---SS------------------
-------------------------S----------------------------------------SS----S-------
----SS-SSSSSSSS--SSSSSSSSSSSSSSSSSSSS---------S---------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------S-----
--------S-------S----------S---SS--S-SSSSS--SSSSSSSSS----------S-----S-SSSSS--S-
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--S------
--S----SSS----------------------------------------------------------------------
---S------S-S-S---SS-S--S------------------------------------------------------S
------------------------S---------------------------------S---------------------
---------------------------------------------------------S------------------SS--
---S----------S-------------S----------------S-----------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_184
--------------------------------------------------------------------------------
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----ACCTCTCTACTATGGCCGCA--------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_1238
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CAGGGTGGAGAAATCCGGTC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>forward_970
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GTCCGCTTCC
TCCTCTTCTG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_2548
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CGGATCCACAGGA
CAACGAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>forward_973
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------CGCTTCC
TCCTCTTCTGGTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>reverse_3442
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GCTGCTGTGTTGGAGACGAA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
