>input_sequence_46374
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATGAGTGTGTCAGGGTCGGAGAGCCGG
GCCTCGGCCAACAAGCCCAAGTGTATGTCAC----CATGATTGTGCCGCATTCTTTGATTTGATTTCCCTATTTTGCCGA
GAGAAACAAAAATGCAGGCGCGTGTGTTCCTGTGACTGATTAAATTTCCGTTCCGTTTTGGCAGATTCTAAATTCACGCA
GCAGGAGCTCCCGGCATGCAAGCCGTTGCTAACTCCCGGAATCGTACGATTTAATTATTACTCCATTTTGT---TTCTCT
TGTGATGGTCATTGCAAACGT-AACATCGATCCAGCGCTACATCTTTGTCAACCTGAATGTAGTAACATGAAACCGTCGA
TTGATATATAGGTCATCGGCGCCTTCTCGCTCATCGGCATCATCTTCGTCCCGATAGGGCTCGCGTCCCTGTCAGCGTCG
CAGGAGGTAAAATTTTTTTTCAGACAAATGCAGTTGCAGTGCTATATGAACAAAATGCATTTCATCTCTGCTGCTCCCTA
ATCTGATAATATTGCAAAATGCAGATTGTTGAATTGATAGATCGATACGATGAGGAGTGTGTCACCGCCAGCGACAAGAT
CGGGTTCATCCAGGACTCCAAGGCCAATAAGGCGTGCACCAGAAAGATCACGGTGCGATTCAGAGACACATCTTCTCATT
CAGAAATGCGCCTGAACTTGAACAGAG-GCAGCCCTGAAG-------ATAACAGCTGGGCGTCTTTGTGTTCAGGTGCCC
AAGCCGATGAAAGGCCCCATACACGTCTACTACCAGCTGGAGAACTTCTACCAGAACCACCGGCGGTACGTCAAGAGCCG
GAGCGACCAGCAGCTGCGCGACAAGGACTACAAGGACCCCCAGGCGGTGATCAAGGCCTGCGACCAGGAGGCCACCACCG
GCGACGGCTCCCTCATCGTGCCCTGCGGCCTCATCGCCTGGAGCCTCTTCAACGACACCTACGCCTTCTCCGTCAACAAG
AAGTCGGTGACGGTGAACAAGAAGGACATCGCCTGGGCCAGCGACAAGAACAGCAAGTTTGGCAGCAACGTCTTCCCCGT
CAACTTCCAGAAGGGCGGCCTCATCGGCGGCGGCAACCTCAACGACAAGCTACCTGTATGCCACC----AAGTGCATGCA
GATATAACAGCTTCTGACGCGGCA-------------TTCTGAACTTGGGCTACATTCGTTGAAATTTTGTAA-------
-CAGCTGAGCGAGCAGGAAGACCTGATCGTGTGGATGCGGACGGCGGCGCTGCCGACGTTCAGGAAGCTGTACGGGCGGA
TTGAGACGGACATCATGGCGAGCGACGAGATCACGGTGGTGATCCAGAACAACTACAACACGTACAGCTTCGGGGGCACC
AAGGCGGTGGTGCTGTCGACGGCATCGTGGATCGGCGGCAAGAACAACTTCATCGGCGTCGCCTACGTGGCCGTCGGCGG
CATCTGCCTCCTCCTCGCCATGGGCTTCGCCGTCCTCTACGTCGTCAAGCCAAGGTGCACATT---ATCTGACATGTTAT
TCTCAAATGGCTAATACGTTCATGCGGAGATCATTCATGGTAAAGCAGCAAATGAACGCGTGGATGGATTTTGTTCAGGG
CCCTCGGAGACCCGGCGTACCTGTCGTGGAACAAGGAGGCCGCCGAGTACTCGCACTGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>chr1B_1_TraesCS1B01G364300
GTGTTTAAACGAATTTCACCCGGTTGAGTCAAACTGTTGTTAACATGTATTTGGCTACGATGGGATTTGGCCTCCTGCAT
CCGTGTACGCGGACGAATATGAAAGAAAATTTATGGGTTGCCGTTGAAGATGCCCTAGTTTGTTACACATGTTGCAAATC
GACGCGTG-AAAATCTTGGTGTTGTTCGGTCCTGAACCTTGGCGTATGCATGCACGCACCTCGATCGCTCCACCGTCTCT
TTGCGGCGAACGGCTCTCCCGAGTCGCCGGAGTC-------TGTGGGGCATCAATCATACAAACACGGCC----------
------ATCCCCGTCCGGCGTGTCGCCGTCACGCGTGCCCGCAGCGCGCCAGC----GCCGCCGTGACCGCGCGCGTGTC
ATAACTCAGAACATCAATTTTTCAGAGCGTCGCCG-TCGCGGCGCTGTCATGCATCATCATGCAGCAGAGAAAGCCGCGC
ACAGACAGCAGCAGGGC---TCGTCTCTTTCCCCGTCCGTCGCT---AGCACGAGGCAAAAATAGCATCCGTGCAAGCGC
AGCGCAGCGGTAGCCACTCGCGGCCCGGTGCGTAGACGTAGACGGCGGAGGCCCGCGCGACGTGGCAGCGGGTGGC----
-----------CAAGTTCCGTTCCGCCATTCCAGCCAGCTCGCACGACTG--------------GGACGGATGGACGGAC
GCGTACGAGGTAACCAACCAACCACCCACCCCACCCCTCGCGCGCAACCAGCCAAACCGCGCGGAGACGACGACGGCGAT
TGATCGGAGCCCGGAACCCCCTCCTCCTCCGGCCGCCGCCCGGGTAGCGATCACGACCACGACCGCACCCGA--------
----CTCGCCTGCGCGCGTACCGCTCTGCCCGCCGCCGATCAGGTAATT----GGTTTGGTATGTAT-----GATCTCCT
CCTCGTCCGGCCCCCGATCAGGGCTGGCATAAACGTGTGATTCCGTTGGATACTGATACTGATTAC-GGCCGCCTATCGA
TCGATCTGGTGGATCTTCTTCCGTGCATGCGTGCGTGCGTGC-------GCAGATGAGTGTGTCAGGGTCGGAGAGCCGG
GCCTCGGCCAACAAGCCCAAGTGTATGTCAC----CATGATTGTGCCGCATTCTTTGATTTGATTTCCCTATTTTGCCGA
GAGAAACAAAAATGCAGGCGCGTGTGTTCCTGTGACTGATTAAATTTCCGTTCCGTTTTGGCAGATTCTAAATTCACGCA
GCAGGAGCTCCCGGCATGCAAGCCGTTGCTAACTCCCGGAATCGTACGATTTAATTATTACTCCATTTTGT---TTCTCT
TGTGATGGTCATTGCAAACGT-AACATCGATCCAGCGCTACATCTTTGTCAACCTGAATGTAGTAACATGAAACCGTCGA
TTGATATATAGGTCATCGGCGCCTTCTCGCTCATCGGCATCATCTTCGTCCCGATAGGGCTCGCGTCCCTGTCAGCGTCG
CAGGAGGTAAAATTTTTTTTCAGACAAATGCAGTTGCAGTGCTATATGAACAAAATGCATTTCATCTCTGCTGCTCCCTA
ATCTGATAATATTGCAAAATGCAGATTGTTGAATTGATAGATCGATACGATGAGGAGTGTGTCACCGCCAGCGACAAGAT
CGGGTTCATCCAGGACTCCAAGGCCAATAAGGCGTGCACCAGAAAGATCACGGTGCGATTCAGAGACACATCTTCTCATT
CAGAAATGCGCCTGAACTTGAACAGAG-GCAGCCCTGAAG-------ATAACAGCTGGGCGTCTTTGTGTTCAGGTGCCC
AAGCCGATGAAAGGCCCCATACACGTCTACTACCAGCTGGAGAACTTCTACCAGAACCACCGGCGGTACGTCAAGAGCCG
GAGCGACCAGCAGCTGCGCGACAAGGACTACAAGGACCCCCAGGCGGTGATCAAGGCCTGCGACCAGGAGGCCACCACCG
GCGACGGCTCCCTCATCGTGCCCTGCGGCCTCATCGCCTGGAGCCTCTTCAACGACACCTACGCCTTCTCCGTCAACAAG
AAGTCGGTGACGGTGAACAAGAAGGACATCGCCTGGGCCAGCGACAAGAACAGCAAGTTTGGCAGCAACGTCTTCCCCGT
CAACTTCCAGAAGGGCGGCCTCATCGGCGGCGGCAACCTCAACGACAAGCTACCTGTATGCCACC----AAGTGCATGCA
GATATAACAGCTTCTGACGCGGCA-------------TTCTGAACTTGGGCTACATTCGTTGAAATTTTGTAA-------
-CAGCTGAGCGAGCAGGAAGACCTGATCGTGTGGATGCGGACGGCGGCGCTGCCGACGTTCAGGAAGCTGTACGGGCGGA
TTGAGACGGACATCATGGCGAGCGACGAGATCACGGTGGTGATCCAGAACAACTACAACACGTACAGCTTCGGGGGCACC
AAGGCGGTGGTGCTGTCGACGGCATCGTGGATCGGCGGCAAGAACAACTTCATCGGCGTCGCCTACGTGGCCGTCGGCGG
CATCTGCCTCCTCCTCGCCATGGGCTTCGCCGTCCTCTACGTCGTCAAGCCAAGGTGCACATT---ATCTGACATGTTAT
TCTCAAATGGCTAATACGTTCATGCGGAGATCATTCATGGTAAAGCAGCAAATGAACGCGTGGATGGATTTTGTTCAGGG
CCCTCGGAGACCCGGCGTACCTGTCGTGGAACAAGGAGGCCGCCGAGTACTCGCACTGAACGCGATGCTGAAATTACAAG
GCCCGTTTTGTAGATGGATGCAGCAGGC----ATAAAACGGTTTAGTAGCTGCTGTG----CTCTTTCTGGTTGTTATTA
---GCTGGGTTTGGTACGTAGTTGATACATGCAGCGTCTCAGACGTTGCTTTCTATACCTTCCTGAGCATCTTCTGATGA
TGCATGCATGGTCTGAGGCTCCGGTTTGTGGCTCACTGCTTCTGGATCATGATCAGCCTACGCGAGATGATCTAGGATAT
ATCTAGGTGCGGCTCTTTTGTTTCCTGCTCAGTAGCTGTAAGACACATTGTGGTTTCTGATAAATGAAATCGGAGAGAGA
GCTCTATCTTTTTT--------------------------------TGAACCTTTGCATTGATAAACCAGAGTACATTTA
CAGCAGAGTAGATTGGGGGTAGGGAAAGAAAGCGAAATACATAAAGTTCACATTACAATCTCATAGATAAGTGCGATGAT
GGCTCTGGACTTGCCAATGAAAACGGTGAAAGCAATGAACAGAGTGTGTAGAGGTTTTCTATGGTGCAGAAAGGCGGATG
TCTGCGGTGGGCATTGCGATGTGGTCTGGGAGTCGGTATGCACGCCCAAATGGGCAGGTGGGCTTGGCGTTCCTAACATA
CGGTGGATGAATGTTGCCATGCAGAGTAGATGGTCGTGGCTCAAACGTAGAGATACTGAAAGGCCTTGGAAGGAGTTCGT
GATCAAAGTACCGAAGGAGTCCAAGCTCATATTCCAGGCTGCCACGAGAGCGAACATTGGTGATGGCCGAACTACCCTTC
CTTTTCTGGGAGGATCGATGGCTGGATGGGATGAGAGTTCAGGAGCTCACGCCTACACTGTATACCCAGATTCCAACACG
CATATGTTTCACATGGATGGTTGGTCAGGTTGCCCTAGACGGACCTGGGCTGGAGACATTGGACCCAACTTGGGAAGCGA
TGCCCTTCAAGAGTTCTTCTTACTATGGACAAGGCTAAGAGCATCTCCAGCCGTTCGGCCCC
>chr1A_136
--------------------------------------------------------------------------------
-------------------------------------------------------TAGTTTGTTACGCATGCTGCAAATC
GACGCGCG-AAAATCTTGGT-TTGTTGGGTTCTGAACCTTGGCGTATGCAT----GCACCTCGATCGCTCCACCGTCTGC
TTGCGGCGAACGGCTCTCCCGAGTCGCCGGAGCAGGACGGCTGCGGGGCATCAAT---ACAAACACGGCC----------
------ATCCCCGTCCGGCGTGTCGCCGTCACGCCTGCTCGCCGCGCACCAGCGCCGGCCGCCGTGACCGCGCGCGTGTC
GTAACTCAGGACATT-ATTTTCCAGAGCGTCGCCGCTCGCGGTGCTGTCATGC---ATCATGCAGCAGAGAAAGCCGCGC
ACAGACAGCAGCAGGCTCGTTCGTCTCTTTCCCCGTCCGTCGCAT---GCACGAGGCAAAAATAGCATCCGCGCAAGGCG
CAACAGCCGCGCAGT---------CCGGTGCGCGGACGTAGACGGCGGAGGCCCGCGCGACGTGGCGGGCGGCTAGCGCG
CGGGGAGGTCTCAAGTTCCGTTCCGCCATTCGAGCCAGCTCCCACGACGCCGACTGGGACGGGCGGAC----GGACGGAC
GCGTACGAGGTAACCAACCAGCCACCCACCCCC---------CGCAACCAGCCAAACCACACGAAGACGACGACCGAT--
-----------CGGAACCCCCTCCTCCTCCGGCCGTCCCGCGGGAGGCGAT------CACGACCGGACTCGC--------
----CTCACCTGCGCGCGCGTCGCTCTGCCCGCCGTCGATCAGGTAATT----GGTTTGGTATGTACGATGCGATCTCCT
TCTCGTCCGGCCCCCGATCAGGGCCGGCATAAACGCGTGATTCCGTTGGATACTACTTACTCATCGTGGCCGCCGGCCGA
TGGATCTGGTTGGTTTTCTTCT----------------GTGC-------GCAGATGAGTGTGTCAGGGTCGGAGAGCGCG
GCCTCGGCCAACAAGCCCAAGTGTATGTCACTATGCATGATTGTGCCGCATTCTTTGATTT-----CCCTATTTTGTTGA
GAGAGAAAAAGATGCAGGTGCGTGTGTTCCTGTGACTGATTGAATTCCCGTTCCGTTTTGGCAGATTCTAAATTCACGCA
GCAGGAGCTCCCGGCATGCAAGCCGTTGCTAACTCCAGGAATCGTACGATTTAATCATTACTCCATTC-GT---TTCTCT
TGTGATAATTGCAAAT---GT-AACATCGATCCAGGGTTACGTCTTTGTCAACCTGAATG---TAACATGAATCCGTCGG
TTGATTGATAGGTCATCGGCGCCTTCTCGCTCATCGGCATCATCTTCGTCCCGATAGGGCTCGCGTCGCTGTCGGCGTCG
CAGGAGGTGAAGAA----TTCAGACTAGTGCAGTTGCAGTGCTACATGAACAAAATGCATTTCATCTTTGCTGTTCCCTA
ATTTGCCACTATTGCGAAATGCAGATTGTTGAACTGGTAGATCGATATGACGAGGAGTGCGTTACCGCCAGCGACAAGAT
CGGGTTCATCCAGGACTCCGAGGCCAACAAGGCGTGCACCAGAAAGATCACGGTGAGATTCAGAGAGACATCTTCTTATT
CAGAAATGCGTCTGAACTTTGCTGGTTACACTCACACTTCAGAAGACAACATGGCA-----TCTTTGTGTTCAGGTGCCG
AAGCCGATGAAGGGACCCATACACGTCTACTACCAGCTGGAGAACTTCTACCAGAACCACCGGCGGTACGTGCAGAGCCG
GAGCGACCAGCAGCTGCGCGACAAGGACTACAAGGACCCCAAGGCGGTGGCCAAGGCCTGCGACCCGGAGGCCACCACCG
GCGACGGCTCCCTCATCGTGCCCTGCGGCCTCATCGCCTGGAGCCTCTTCAACGACACCTACGCCTTCTCCGTCAACAAG
AAGTCGGTGACGGTGAACAAGAAGGACATCGCCTGGGCCAGCGACAAGAACAGCAAGTTCGGCAGCAACGTCTTCCCCGT
CAACTTCCAGAAGGGCGGCCTCATCGGCGGCGGCAACCTCAACGACAAGCTACCTGTATGTGACC---------------
-------------AAGTGTCTGTGATGCAACATTTCCTTCTGAACTTGATCCGGCTGCGTTGCCTTGTTTGTGGTTTTGA
GCAGCTGAGCGAGCAGGAGGACCTGATCGTGTGGATGCGGACGGCGGCGCTGCCGACGTTCCGGAAGCTGTACGGGCGGA
TCGAGGCGGACATCATGGCGAGCGACGAGATCACGGTGGTGATCCAGAACAACTACAACACGTACAGCTTCGGGGGCACC
AAGGCGGTGGTGCTGTCGACGGCGTCGTGGATCGGGGGGAAGAACAACTTCATCGGCGTCGCCTACGTGGCCGTCGGCGG
CATCTGCCTCCTCCTCGCCATGGGCTTCGTCGTCCTCTACGTCGTCAAGCCAAGGTAAATACTAGCATCTGACATGTTTA
TGTGCAGATAAT------------------TCATGTGTGATAAAGCAGCAAATGAATGTGTGGATGGATTTTGTTCAGGG
CCCTCGGAGACCCCGCGTACCTGTCATGGAACAAGGAGGCCGCCGAGTACTCGCACTGAACGCGACGCTGAAATTACAAG
GCCCGTTTTGTAGATGGATGCAGCAGGGATCGATAAAACGGTTTAGTAGCTGCTGTGTGTGCTCTTTCTGGTTGTTATTA
TTAGCTGGGTTTGGTGGTTGATGCAG----GCAGCGTCTCAAACGTTGCTTTCTATACCTTCCTGAGCATAATCTTCTGA
TG-ATGCATGGTCTGAGGCTCCGGTCTGTGGCTC-----TTCCAGATCGTGATCAGCCTACGCGAGATGATCTAGGATAT
ATCTAGGTGCGGCTCTTTTGTTTCCTGTCCAGTAGCTGTAAAACATATTGTGGTTTCTGATAAATGAAATCGGAGAGAGC
TCTACTTTTTTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>chr1D_147
--------------------------------------------------------------------------------
------------------------------------------------------------------ACATGTTGCAAATC
AGGGCGTGAAAAATCTTTGT-TTGTTTGATTCTGAACCTTGTCGTATGCACCATCT----------GCACCACTGTCGGT
TTGCGGCGAACGGCTCTCCTGAGACGCCGGAGTCGAACGGCAGTGGGGCGTCGAT---ATACGACACAGACACGGCCAGG
CCATCGATCCCCGTCCGGTCCGTCGCCGTCACGCCTGCTCGCAGCGCGCCCGC----GCCGCCGT------GCGCGTGTT
GGAACGTCAG---TT-GTTATTCAGAGCGTCGCCG-TCGCGGTGCTGTCATGCATCATGCAGACCTAAACTCGAAAGCGC
CACACAGC-----------TTCGTCTCTTTCCCCGTCCGTCGCCAGCAGCACGAGGCAAAAATAGCAACCGCGCAGC---
----CAGCGGCAGCCACTCGCGGCCCTGTACGTAGACGCAGACGGCGGAGGCCCGCGCGACGTGGCAGCGGGTGGC----
-----------CAAGTTCCGTTCCGCCATTCCAGCCAGCTCGCACGACTG--------------GGAC----GGACGGAT
GCGTACGAGGTAACCACCCACCCACCC---------CTCGCGCGCAACCAGCCAAACCACGCGGAGACGACGACGGCGAT
CGATCGGAACCCGGAACCCCCTCCTCCTCCGGCCGGCGCCCGGGAAGCGATCACGATCACGACCCCGAACACGATCGCAG
CCCCCTCGCCCGCGCGCGCGTCGCTCCGCCCGCCGTCGATCAGGTAATTAATTGGTTTGGTAT--AT-----GATCCCCT
TCTTGTCCGGCCCCCGATCAGGGACGGCATGAACGTGTGATTCCATTGGATACTACTTACTCATCGTGGCCGCCGACCGA
TGGATCTGGTTGATTTTCTTCC----------------GTGCGTGCGTGGCAGATGAGTGTGTCAGGGTCGGAGAGCGCG
GCCTCGGCCAACAAGCCCAAGTGTACGTC--------TGATTGTGCCGCCTTCTTTGATTTGATTTCCCTATTTTACTGA
GAGAAAAAAATGCAGGCGGCA---TGTTCTTGTGACTGATTGAATTCCCGTTCCGTTTTGGCAGATTCTAAATTCACGCA
GCAGGAGCTCCCGGCATGCAAGCCGCTGTTAACTCCCGGAATCGTACGATTTAATTATTACTCCGTTTTGTTTCTTCTCT
TGTGATGATCGTTGCAAATGTAAACATCGACCCAGGGCTACATCTTTGTCAACCTGAATGTACTAACATGAATCCTTCGG
TTGATTGATAGGTCATCGGCGCCTTCTCGCTCATCGGCATCATCTTCGTCCCGATAGGGCTCGCGTCGCTGTCGGCGTCA
CAGGAGGTGAAAAA----TTCAGACAAGTGCAGTTGCAGTGCTACATGAACAAAATGCATTTCATCTTTGCTGTTCCCTA
ATTTGCCGCTACTGCAAAATGCAGATTGTTGAACTGATAGATCGATACGACGAGGAGTGCGTTACCGCCAGCGACAAGAT
CGGGTTCATCCAGAACTCCAAGGCCAACAAGGCGTGCACCAGAAAGATCACGGTGAGATTCAGAGACACATCTTCTCATT
CAGAAATGCGTCTCTACTCTGCTGGTATGCAGTCCTGAAG-------AACATGGCA-----TCTTTGTGTTCAGGTGCCG
AAGCCGATGAAGGGCCCCATACACGTCTACTACCAGCTGGAGAACTTCTACCAGAACCACCGGCGGTACGTGCAGAGCCG
GAGCGACCAGCAGCTGCGCGACAAGGACTACAAGGACCCCAAGGCGGTGGCCAAGGCCTGCGACCCGGAGGCCACCACCG
GCGACGGCTCCCTCATCGTGCCCTGCGGCCTCATCGCCTGGAGCCTCTTCAACGACACCTACGCCTTCTCCGTCAACAAG
AAGTCGGTGACGGTGAACAAGAAGGACATCGCCTGGGCCAGCGACAAGAACAGCAAGTTCGGCAGCAACGTCTTCCCCGT
CAACTTCCAGAAGGGCGGCCTCATCGGCGGCGGCAACCTCAACGACAAGCTACCTGTCTGTGACTAATTAAGTGCACAAA
GAATTAACTTCTGAAGGATCTCTGATGCAGCATTTCCTTCTGAAC-------------------------------TTGA
GCAGCTGAGCGAGCAGGAGGACCTGATCGTGTGGATGCGGACGGCGGCGCTGCCGACGTTCAGGAAGCTGTACGGGCGGA
TCGAGACGGACATCATGGCGAGCGACGAGATCACGGTGGTGATCCAGAACAACTACAACACGTACAGCTTCGGGGGCACC
AAGGCGGTGGTGCTGTCGACGGCGTCGTGGATCGGGGGGAAGAACAACTTCATCGGCGTCGCCTACGTGGCCGTCGGCGG
CATCTGCCTGCTCCTCGCCATGGGCTTCGTCGTCCTCTACGTCGTCAAGCCAAGGTAAATACCAGCATCTGACATGGTTA
TGTGCAGATCAT------------------TCATTCATTGTAAAGCAGCAAATGAATGTGTGGATGGATTTTGTTCAGGG
CCCTCGGAGACCCCGCGTACCTGTCGTGGAACAAGGAGGCCGCCGAGTACTCGCACTGAATGCGACGCTGAAATCACAAG
GCCCGTTTTGTAGGTGGATGCGGCAGGGCT--------------------------------------------------
----------------------------------CGTCTCAAACGTTGCTTTCTATGCCTTCCTGAGCATCTGATGATGA
TG-ATGCATGGTCTGAGGCTCCGGTTTGTGGCTC-----TTCCGGATCGTGATCAGCCTACGCGAGATGATCTAGGATAT
ATCTAGGTGCGGCTCTTTTGTTTCCTGTTCAGTAGCTGTGAAACACATTGTGGTTTCTGATAAATGAAATCGGAGAGAGA
GCTCTTTTTGTTTTTTTAACGGTGCTACGACGAGCTTACGCCGGCCTGAAACTTTGCATTAATAAACCGGAGTACATTTA
CAGTAGAGTAGATTGGGGGTAGGGAAAGAAAGCGAAATACAT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
--------------------S-----S---S--------------------SSS------------------------S-
-------------------------------------------------------SSS----------------------
----------------------------------S---S-----------------------------------------
S--------S----SS--------------------------S-------------------------------------
---------------SS--------------------------S---------------------------S-----SSS
SSSS------S---------------------------------------------------------------------
--------------------------------------------------------------------SSSS--------
--------------------S-----------SSSS----------------------S---------------------
S-------S--------------------------S--------S-----------S-----------S--S--------
------------------SSS--------------S--------------------------------------------
S-----------------------S-----------------------------SS-SSSSSS-SS--------S-S---
-S--------S---S-------SSSSSSSSSSSSSSSS---------------------------------------SS-
-----------------------------------------------------------------------------S--
------S---S-------S----------------------S----S---------------------------------
--------------------------------------------------------------------------------
-------S--S-------S----------------S--------------------------S---------S------S
-----SS------------------------------------------------------------S-----S------
--------S---SSSSSS---------S----------------S----------------------S-----S------
--S--SS-S------------------------S----------------S--------S--S-----------------
---------------------------S---------------------------S------------------------
----------S--------SSSSS-SS---------------------SS-SS--SSSSSS------------------S
-----------S-----------------------------------------------------------SS-------
----------------------------------------S--------SS--------------S--------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
------------------------------------------------------------SS--------------SSS-
--SS----SS--SSS-SSS-S-SS------------------------SS-SSSS-S-----SSS-S--SSSS-------
------------------S-------------------------------------------------------------
-S------------------------------------------------------------------------------
-----------------------S-----------S--S-----------------------------------------
-----------------------------S--------------------------SS-S-S----------------SS
-S-SS-SSSSS-SSSSSSSSSSSSSSSSSS--------------------------S-S---------------------
-------------S---------------------------------------------------S--------------
---------------------------S----------------------------------------------------
---------------SSS-SS-SS-SSSSS-----------S--------------------------------------
--S-------------------------------SSSSS---S-----S-------------------------------
---------------------------S-------------S--------------------------------------
-----S-S------------------------------------------S---------S-------S-----------
---S--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1066
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TGGTGGATCTTCTTCCGTGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_2339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AGACCTGATCGTGTGGATGC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>forward_1786
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TGCGCCTGAACTTGAACAGA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>reverse_3503
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GCCTTGGAAGGAGTTCGT
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
