>input_sequence_46355
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---------ATGAGATCCCCATCCGGCGCCCGTCCCAGCAGCGGAGGGGGCGCAGCAGCAGACGACGACTTCGCCTTCTA
CTACTCTTTCTTCCAGGACGCCGCCGCCGCGTCGCCGCTCCCGCTCGCGCTCGACGGAGCC------GCCATGCCTAACA
ACCGCCGGAGGAAGCGCGGAGTGGACGACGACTCCGCCGCGGCGCCCATCAAGGACGGTAGCAACAACGGAAGGAAGCGC
TCCATCGCCACCATAATAACTTCGCTCGCCGCGCTCGAGGCCGAGGGCCACGCCGACAGCGCGGGGGCCGCCGACGCCTC
CCGCCGCGAGCTCGCGCTCCTCGAGTCCAACGCCGATAACAAGTCGCAGGCCATGATGGACTACTTCGCCAAGATGGAGG
GCAGCTTCGATGCAGACGCCGACTCCGAGGCCGCTGCGCGCTCCAAGCGCTCGCGGCTCTCGGCGTCGGCAGCGGCAGTG
GCCGTCGTGGCTGGCGAGGAGGCCGCCACCAATACTGCCGCGTCGGCCTCGCCGCCGCGTGCAGGCCACCACCAACGTCG
GCTGTGGGTCAAGGACCGGTCGCAGGCGTGGTGGGACCAGTGCAATAGCCCCGACTTCCCAGAGGCAGAGTTTCGGCGCG
CCTTCAGGATGGGCCGGGAGACGTTCGACATGATCTGCGAGGCGCTCGGCTCCGCGGTGGCCAAGGAGGACACCATGCTT
CGCGCGGCCATCCCCGTGCGCCAGCGCGTCGCCGTCTGCATCTGGCGCCTCGCCACCGGTGAACCGCTCCGCCTCGTCTC
CAAGCGCTTCGGCCTCGGCATCTCCACATGCCACAAGCTCGTCCTCGAGGTCTGCGGTGCCATCAAGTCCGTCCTCATGC
CGCGTTTCCTCCAGTGGCCCGACGAG------GCCGCCGCCGGCAGATTCAAGGAGGGCTTCGAGAGATCCTTCGGTGTT
CCGGGGGTCATCGGAGCCATGTACACCACGCACATCCCTATCATCGCGCCCAAGATCTCCGTCGCCGCCTACTTCAACCG
TCGGCACACGGAGCGCAATCAGAAGACATCCTACTCCATCACGCTCCAGGGGGTGGTCGGCCCTGACCGCGCCTTCACCG
ACGTCTGCATCGGCTGGCCGGGCTCCATGCCGGACGATCAGGTGCTCGAGAAATCCATGCTGCACCAGCGCGCCGCGGCG
GGTATGATGCACGACGCTTGCCTCGTCGGCGGCGCAAGCTACCCGCTCATGGACTGGGTGCTCGTGCCGTACACGCACCA
GAACCTGACATGGACGCAGCACGCCTTCAACGAGAAGGTCGGCGACATCCGCAACGTGGCCGTGGAGGCGTTCGCGCGGC
TCAAGACGCGGTGGGCGTGCCTCCAGAAGCGCACGGAGGTGAAGCTCCAGGACCTCCCCGTGGTGCTGGGCGCCTGCTGC
GTCCTGCACAACATCTGCGAGATGCGCCGCGAGGAGCTCGAGCCGGAGGTCCCGTTTGCGCTTGTCGACGACGATACCAC
GCCGGAGACCCCTGTTCGCTCCGAGACCGCCAAGCAGGAGAGGGACAGCATCGCGCACAACCTCCTCCACCGCGGTTTCG
CCGGCACCACATTTTTCTGATCAAATCACCTCCTGGCCCTCTCCTTGTCTTGGGTACAGAT--AAA--------------
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>chr3D_1_TraesCS3D01G212000
GATCCAGAAGCCATGGAGAAACACGCCCCGAGCGACGCCGACAGAAGGAAAAGCCGGGACCCGCGTGGCCGCCGACAAAA
GGAGAGGAAGCCGGGGCCGGGGTGGCCGACGGCGGAGGCAGGGTGGACGCTGGGGCCGGAGTGGCGCCGGCGGTGGCGAG
GCTCGCTAGGGGAGGGGCTCGCTGGGGGGATAAACCAAGAATAGTCTCCTGGCGAAAAAAAGAGTATAATGTTATCACCT
ATGTTAAGGTCCGGGTAGTCTGAAGGGATGATCGGAACAGATGACAGTGGGTCCCTTGAGGCTTGCGAAAAACGTCAGCG
ACGCGGCGGTACGCAAGCATGTCGACGAAAGGACGCCATGCCGCCGCGGTTTCTCGAACCCCGTGTCCGGCCCAGCTCTC
GATCTCACCGCTGTAGGCCTACCACCAATTTT-----------------------GACAGTTTGTACGTATTACTCCAGT
TTACTGGCTCGCACGTGAG------GGTGCCACGGCAGCCTGATTGTCATCCCATTGACCACGTTCTTCCGCTAGTCCCC
ATTCCCCACCGCGCCGCGCTGTGCCGAGAAGAGGCGAGGAGGAGTCCAGTCCACGCGGTGTCGTGCGGATCTGCGAAACC
GCGTGAACCGCGGCACGCACCCCCACCCGTTCGCTGTCAGCCGGTGGGTGCCCACCCGCCACACCGCGTCCTCGGGGCGC
GGCCACCTTCCTGGCTGCTCCTGCTCC------GCGCAGGCGCGGGCCGGTCTCGCTTTCCTGCCTCCT---CTTCCTTG
TCCAAAAAGCAACCCCCGCGTTCACACCTCGCCATCGATCGGCCTCGTCGCATCACGCCGTATTTATATCGTTCCCCATT
TCACACCAGTCTCCTCGCCTCCACCTACGAATCACAGGACGCTCATTTCTCTCGTTTCGTTTCCTCTTCAATCGCTTCGC
TGACCCGCACCCACCACCGCACCGCACCAC----------TCG-CGACCCGCGCGCACCCGGCCAGCGTTACTAGCTAGC
GTGACGTATATGAGATCCCCATCCGGCGCCCGTCCCAGCAGCGGAGGGGGCGCAGCAGCAGACGACGACTTCGCCTTCTA
CTACTCTTTCTTCCAGGACGCCGCCGCCGCGTCGCCGCTCCCGCTCGCGCTCGACGGAGCC------GCCATGCCTAACA
ACCGCCGGAGGAAGCGCGGAGTGGACGACGACTCCGCCGCGGCGCCCATCAAGGACGGTAGCAACAACGGAAGGAAGCGC
TCCATCGCCACCATAATAACTTCGCTCGCCGCGCTCGAGGCCGAGGGCCACGCCGACAGCGCGGGGGCCGCCGACGCCTC
CCGCCGCGAGCTCGCGCTCCTCGAGTCCAACGCCGATAACAAGTCGCAGGCCATGATGGACTACTTCGCCAAGATGGAGG
GCAGCTTCGATGCAGACGCCGACTCCGAGGCCGCTGCGCGCTCCAAGCGCTCGCGGCTCTCGGCGTCGGCAGCGGCAGTG
GCCGTCGTGGCTGGCGAGGAGGCCGCCACCAATACTGCCGCGTCGGCCTCGCCGCCGCGTGCAGGCCACCACCAACGTCG
GCTGTGGGTCAAGGACCGGTCGCAGGCGTGGTGGGACCAGTGCAATAGCCCCGACTTCCCAGAGGCAGAGTTTCGGCGCG
CCTTCAGGATGGGCCGGGAGACGTTCGACATGATCTGCGAGGCGCTCGGCTCCGCGGTGGCCAAGGAGGACACCATGCTT
CGCGCGGCCATCCCCGTGCGCCAGCGCGTCGCCGTCTGCATCTGGCGCCTCGCCACCGGTGAACCGCTCCGCCTCGTCTC
CAAGCGCTTCGGCCTCGGCATCTCCACATGCCACAAGCTCGTCCTCGAGGTCTGCGGTGCCATCAAGTCCGTCCTCATGC
CGCGTTTCCTCCAGTGGCCCGACGAG------GCCGCCGCCGGCAGATTCAAGGAGGGCTTCGAGAGATCCTTCGGTGTT
CCGGGGGTCATCGGAGCCATGTACACCACGCACATCCCTATCATCGCGCCCAAGATCTCCGTCGCCGCCTACTTCAACCG
TCGGCACACGGAGCGCAATCAGAAGACATCCTACTCCATCACGCTCCAGGGGGTGGTCGGCCCTGACCGCGCCTTCACCG
ACGTCTGCATCGGCTGGCCGGGCTCCATGCCGGACGATCAGGTGCTCGAGAAATCCATGCTGCACCAGCGCGCCGCGGCG
GGTATGATGCACGACGCTTGCCTCGTCGGCGGCGCAAGCTACCCGCTCATGGACTGGGTGCTCGTGCCGTACACGCACCA
GAACCTGACATGGACGCAGCACGCCTTCAACGAGAAGGTCGGCGACATCCGCAACGTGGCCGTGGAGGCGTTCGCGCGGC
TCAAGACGCGGTGGGCGTGCCTCCAGAAGCGCACGGAGGTGAAGCTCCAGGACCTCCCCGTGGTGCTGGGCGCCTGCTGC
GTCCTGCACAACATCTGCGAGATGCGCCGCGAGGAGCTCGAGCCGGAGGTCCCGTTTGCGCTTGTCGACGACGATACCAC
GCCGGAGACCCCTGTTCGCTCCGAGACCGCCAAGCAGGAGAGGGACAGCATCGCGCACAACCTCCTCCACCGCGGTTTCG
CCGGCACCACATTTTTCTGATCAAATCACCTCCTGGCCCTCTCCTTGTCTTGGGTACAGAT--AAATTAAACATGCACCG
AATTCTTTTAGCCGCTAGGATAGAACATTTTGTTAGGATTTGTACACAACGTTCAGAGAAACTGGAAATTCATGTAAACA
TTCTGTGGAAAATTTCGTCAGTAGCTGCTGTCGGTTACTCGGTTTATTGTTTAAAGATATATATATATATATACAATTTA
ATTTACAAAATGTGAAGAGCAAAGCTGGTTTAAATGAAGAGCATTT---GTGTGTTGCATTCTGTACGCCATTCTCTCTT
T-AACGACATGCTCTTATAAATTCATCTGACCGTGCTGGATCGGCTGGTCCGCTCGTTGTAGCTGCGCCCGTTGGAA---
-------------CTGTCACGCGCGAACAAATTCAGGATATATTGTCCCTGTTTTAGGACAATCTAAGGTATGCGGCTGT
TCTGGTTCTGAAAAAATTCTGACCTTTTTGTGTGCCAAATATTGACAAATATTTTGATTGGTCACAATT-CATTACCAGA
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--------------------------------TGACATTAGTGGAAAATGTGGCGAAAACAAAATCGATGCTCTAAAATG
CTATC-TTTAGGTTTGTTTTGAAATTATTTTT-ATTTTACTATTCATCTGACCACACATGAGCTTGGAATCAAAACAACA
CTTTCGCAATCTAAGGCATCTCCAAAGCCGAGCCTCAAATTGCCCGCATACAA------------TCCGGACATACTTTG
TCATTCAACATGGACAGGTATATGTCCATGTCTGTTTTTTTTTCTAAACCGGAAAGGCGCCCTCGGCCCACCCAAAACCA
CTCCCGGAGCTCACATCTCAGTCCCTTCCCCCTTGTTCTCCTTTGCTCCGCATCCGCTTTCTCCCAGGCCGATGTCGCCC
CCGTACCACCTCAGCAGCCAGCCAAGTCCTTGTTGGACCTCCG----------------CCATGCCGGTTTGCCTA-GCC
GTCGTTCCACCTCTCGTCCATCCG-CGCGTAGGTACCATTCA-CCCAGCACATGCCTTCCGTGGGGTCACTACGCCTGGC
AAGTGCTTGGTGAAATGCCCGTGCTAAATTTT
>chr3B_288
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-----------------------------------------------TGGGTCCCTTGAGGCATGCGAAAAACGTCAGCG
ACGCGGCGGTACGCAAGCATGTCGACGAAAGGACGCCATGCCGCCGCGGTTTCTCGAACCCCGTGGCCGGCCCAGCTATC
AATCTCACCGCTGTAGGCTTACCACCAAATTTTGACAGTTTTTTAGAGTAATTTTGACAGTTTGTACGTATTACTCCAGT
TTACCGGCTCGCACGTGAGGGTGACGGTGCCACGGCAGCCTGATTGTCATCCCATTGACCACGTTCGTCCGCTAGTCCCC
GTTCCCCACCGCGCCGCGCCGTGCCGAGAAGAGGC---GAGGAGTCCAGTCCACGCGGTGTCGTGCGGATCTGCGAAACC
GCGTGAACCGCGGCACGCACCCGCACCCGTTCGCTGTCAGCTGGTGGGTGCCCACCCGCCACACCGCGTCCTCGGGGCGC
GGCCATCTTCCTGGCTGCTCCTGCTCCACACCAGCGCAGGCGCGGGCCGGTCTCGCTTTCCTGCTGCCTC-CCTTCCTTG
TCCAAAAAGCAACCCCCGCGTTCACACCTCGCCATCGATCGGCCTCGTCGCATCACGCCGTATTTATATCGTTCCCCATT
TCACACCAGTCTGCTCGCCTCCACCTACGAATCACAGGACGCTCATTTCTCTCGTTTCGTTTCCTCTTCAAT-----CGC
TGACCCGCACCCACCACCGCACCGCACCAA----------TCGCCGACCCGCGCGCACCCGGCCAGCGTTACTAGCTAGC
GTGACGTATATGAGATCCCCATCCGGCGCCCGTCCCAGCAGCGGAGGGGGCGCAGCAGCAGACGACGACTTCGCCTTCTA
CTACTCTTTCTTCCAGGACGCCGCCGCCGCGTCGCCGCTCCCACTCGCGCTCGACGGAGCC------GCCATGCCTAACA
ACCGCCGGAGGAAGCGCGGAGGGGACGACGACTCCGCCGCGGAGCCCATCAAGGACGGTAGCAACAACGGAAGGAAGCGC
TCCATCGCCACCATAATAACTTCGCTCGCCGCGCTCGAGGCCGAGGACCACGCCGACAGCGCGGGGGCCGCCGACGCCTC
CCGCCGTGAGCTCGCGCTCCTCGAGTCCAACGCCGACAACAAGTCGCAGGCCATGATGGACTACTTCGCCAAGATGGAGG
GCAGCTTTGATGCCGACGCCGACTCCGAGGCCGCTGAAGCGCGCAGCGGC------CTCTCGGCGTCGGCAGCGGCAGTG
GCCGTCGTGGCTGCCGAGGAGGCCGCCACTAATACCGCCGCGTCGGCCTCGCCGCCGCGTGCAGGCCACCACCAACGTCG
CCTGTGGGTCAAGGACCGGTCGCAGGCGTGGTGGGACCAGTGCAATAGCCCCGACTTCCCGGAGGCAGAGTTTCGGCGCG
CCTTCAGGATGGGCCGGGAGACGTTCGACATGATCTGCGAGGCGCTCGGCTCCGCGGTGGCCAAGGAGGACACCATGCTT
CGCGCGGCCATCCCCGTGCGCCAGCGCGTCGCCGTCTGCATCTGGCGCCTCGCCACCGGTGAGCCGCTCCGCCTCGTCTC
CAAGCGCTTCGGCCTCGGCATCTCCACATGCCACAAGCTCGTCCTCGAGGTCTGCGGTGCCATCAAGTCCGTCCTCATGC
CGCGCTTCCTCCAGTGGCCCGACGAG------GCCGCCGCCGGCAGATTCAAGGAGGGCTTCGAGAGATCCTTCGGTGTT
CCGGGGGTCATCGGAGCCATGTACACCACGCACATCCCTATCATCGCGCCCAAGATCTCCGTCGCCGCCTACTTCAACCG
TCGGCACACGGAGCGCAATCAGAAGACATCCTACTCCATCACGCTCCAGGGGGTGGTCGGCCCTGACCGCGCCTTCACCG
ACGTCTGCATCGGTTGGCCGGGCTCCATGCCGGACGATCAGGTGCTCGAGAAATCCATGCTGCACCAGCGCGCCGCGGCG
GGTATGATGCACGACGCCTGCCTCGTCGGCGGCGCAAGCTACCCGCTCATGGACTGGGTGCTCGTGCCGTACACGCACCA
GAACCTGACATGGACGCAGCACGCCTTCAACGAGAAGGTCGGCGACATCCGCAACGTGGCCGTGGAGGCGTTCGCCCGGC
TCAAGACGCGGTGGGCATGCCTCCAGAAGCGCACGGAGGTGAAGCTCCAGGACCTCCCCGTGGTGCTGGGCGCCTGCTGC
GTCCTGCACAACATCTGCGAGATGCGCCGCGAGGAGCTCGAGCCGGAGGTCCCGTTTGCGCTTTTCGACGACGATACCAC
GCCGGAGACCCCTGTTCGCTCCGAGACCGCCAAGCAGGAGAGGGACAGCATCGCGCACAACCTCCTCCACCGCGGTTTCG
CCGGCACCACATTTTTCTGATCAAATCACCTCCTGGCCCTCTCCTTGGCTTGGGTACAGAT--AAATTAAACATGCACCG
AATTCTTTTAGCCGCTAGGATAGAACATTTTGTTAGGATTTGTACACAACGTTCAGAGAAACTGGAAATTCATGTAAACA
TTCTGTGGAAAATTTCGGCAGTAGCTGCTGTCGGTTACTCGGTTTATTGTTTAAAGAT--------ATATATACAATTTA
ATTTACAAAATGTGAAGAGCAAAGCTGGTTTAACTGCAGAGCATTTCTAGTGTGTTGCATTCTGTACGCCATTCTCTCTT
TTAACGACATGCTCTTATAAATTCATCTGACCGTGCTGGATCGGCTGGTCCGCTCGTTGTAGCTGCGCCCGTTGGAA---
-------------CTGTCACGCGCGAACAAATTCAGGATATATTGTCCCTGTTTTAGGACAATCTAAGGGACGCGGATGT
TCTGATTCCGAAAAAATTCTGACCTTTTTGTGTGCCAAATATT----------TTGATTGGTCACAATTTCATTATCAGA
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--------------------------------TGACATTAGTGGAAAACGTGGCGTCAACAAAATCGATGCTCCAAAATG
TTATC-TTTAGGTTTGTTTTG-AATTTTTTTT-ATTCTACTATTCATCCGACTTCACATGAGCTTGGAATCAAAACAACA
CTTTCGCAATCTAAGACATCTCCAAAGCCGAGCCTCAAATTGCCCGCATACGA------------TCCGGACATACTTCG
TCATCCAACGTGGACAGGTATTTGTCCACGTCTG--TTTTTTTCTAAACCGGAAAGGCGCCCTCGGCCCACCCAAAACCA
CTCCCGAAGCTCACATCTCAATTCCTTCCCCCTTGTTTTCCTTTGCTCCGCATCCGCTTTCTCCCAGGCCGATGTCGCCC
CCGTACCACCTCAGCAGCCAGCCAAGTCCTTGTTGGACCTTCG----------------CCATGCCGGTTTGCCTACGCC
GTCGTTCCACCTCTCGTCCATCCG-CGCATAGGTACCATTCA-CCCAGCACATGCCTTCCGTGGGGTCACTACGCCTGGC
AAGTGCTTGGTGTAATGCCCGTGCTAAATTTT
>chr3A_292
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---------------------------------------------------TCCCTTGAGGCTTGCGAAAAACGTCAGCG
ACGCGGCGGTACGCAAGCATGTCGACGAAAGGACGCCATGCCGCCGCGGTTTCTCGAACCCCGTGGCCGGCCCAGCTCTC
GATCTCACCGCTCTAGGCCTACCACCAAATTTTGACAGTTTGTACACGTAT-----------------TATTACTCCAGT
TTACCGGCTCGCACGTGAGGGTGACGGTGCCACGGCAGCCTGATTGTCATCCCATTGACCACGTTCGTCCGCTAGTCCCC
ATTCCCCAACGCGCCGCGCTGTGCCGAGAAGAGGGGAGGAGGAGTCCAGTCCACGCGGTGTCGTGCGGATCTGCGAAACC
GCGTGAACCGCGGCACGCACCCGCACCCGTTCGCTGTCAGCCGGTGGGTGCCCACCCGCCACACCGCGTCCTCGGGGCGC
GGCCACCTTCCTGGCTGCTCCTGCTCCACACCAGCGCAGGCGCGGGCCGGTCTCGCTTTCCTGCTGCCTCACCTTCCTTG
TCCAAAAAGCAAACCCCGCGTTCACACCTCGCCATCGATCGGCCTCGTCGCATCACGCCGTATTTATATCCTTCCCCATT
TCACACCAGTCTCCTCGCCTCCACCTACGAATCACAGGACGCTCATTTCTCCCGTTTCGTTTCATCTTCAAT-----CGC
CGACCCGCACCCACCACCGCACCGCACCGCGCCGCACCAATCG-CGACCCGCGCGCACCCGGCCAGCGTTACTAGCTAGC
GTGACGTATATGAGATCCCCATCCGCCGCCCGTCCCAGCAGCGGAGGGGGCGCAGCAG---ACGACGACTTCGCCTTCTA
CTACTCTTTCTTCCAGGACGCCGCCGCCGCATCGCCGCTCCCGCTCGCGCTCGACGGAGCCGTCGCCGCCATGCCTAACA
ACCGCCGGAGGAAGCGCGGAGGGGACGACGACTCCGCCGTGGCGCCCATCAAGGACGGTAGCAACAACGGAAGGAAGCGC
TCCATCGCCACCATAATAACTTCGCTCGCCGCGCTCGAGGCCGAGGGCCACGCCGACAGCGCGGGGGCCGCCGACGCCTC
CCGCCGCGAGCTCGCGCTACTCGAGTCCAACGCCGACAACAAGTCGCAGGCCATGATGGACTACTTCGCCAAGATGGAGG
GCAGCTTTGATGCCGACGCCGACTCCGAGGCCGCTGCGCGCTCCAAGCGCTCGCGGCTCTCGGCGTCGGCAGCGGCAGTG
GCCGTCGTGGCTGGCGAGGAGGCCGCCACCAATACTGCCGCGTCGGCCTCGCCGCCGCGTGCAGGCCACCACCAACGTCG
GCTGTGGGTCAAGGACCGGTCGCAGGCGTGGTGGGACCAGTGCAACAGCCCCGACTTCCCGGAGGCAGAGTTTCGGCGCG
CCTTCAGGATGGGCCGGGAGACGTTTGACATGATCTGCGAGGCGCTCGGCTCCGCGGTGGCCAAGGAGGACACCATGCTT
CGCGCGGCCATCCCCGTGCGCCAGCGCGTCGCCGTCTGCATCTGGCGCCTCGCCACCGGTGAGCCGCTCCGCCTCGTCTC
CAAGCGCTTCGGCCTCGGCATCTCCACATGCCACAAGCTCGTTCTCGAGGTCTGCGGTGCCATCAAGTCCGTCCTCATGC
CGCGTTTCCTCCAGTGGCCCGACGAG------GCCGCCGCCGGCAGATTCAAGGAGGGCTTCGAGAGATCCTTCGGTGTT
CCGGGGGTCATCGGAGCCATGTACACCACGCACATCCCTATCATCGCGCCCAAGATCTCCGTCGCCGCCTACTTCAACCG
TCGGCACACGGAGCGCAATCAGAAGACATCCTACTCCATCACGCTCCAGGGGGTGGTCGGCCCTGACCGCGCCTTCACCG
ACGTCTGCATCGGCTGGCCGGGTTCCATGCCGGACGATCAGGTGCTCGAGAAATCCATGCTGCACCAGCGCGCCGCGGCG
GGTATGATGCACGACGCTTGCCTCGTCGGCGGCGCAAGCTACCCGCTCATGGACTGGGTGCTCGTGCCGTACACGCACCA
GAACCTGACATGGACGCAGCACGCCTTCAACGAGAAGGTCGGCGACATCCGCAACGTGGCCGTGGAGGCGTTCGCGCGGC
TCAAGACGCGGTGGGCGTGCCTCCAGAAGCGCACGGAGGTGAAGCTCCAGGACCTCCCCGTGGTGCTGGGCGCCTGCTGC
GTCCTGCACAACATCTGCGAGATGCGCCGCGAGGAGCTCGAGCCGGAGGTCCCGTTTGCGCTCTTCGACGACGACACCAC
GCCGGAGACCCCTGTTCGCTCTGAGACCGCCAAGCAGGAGAGGGACAGCATCGCGCACAACCTCCTCCACCGCGGTTTCG
CCGGCACCACATTTTTCTGATCAAATCACCTCCTG-CCCTCTCCTTGGCTTGGTACAGATAAAAAATTAAACATGTAGCG
AATTCTTTTAGCCGCTAGGATAGAACATTTTGTTAGGATTTGTACACCACGTTCAGAGAAACTGGAAATTCATGTAAACA
TTCTGTGGAAAATTTCGGCAGTACCTGCTGTCGGTTACTCGGTTTATTGTTTAAAGAT--------ATATATACAATTTA
ATTTAC-AAATGCGAAGAGCAACGCTGGTTTAAATGAAGAGCATTTCTAGTGTGTTGCATTGTGTACGCCATTCTCTCTT
C-AACGACATGCTCTCAGCTGACCA--------TGCTGGATCGGCTAGTCCGCTCGTTGTCGCTGCGCCCGTTGGAGTGC
AGGCGCACTGCGGCTGTCACGGGCGAACAAATTCAGGATATATTTTCCCTATTTTAGGACAATCTAAGGGACGTGGCTGT
TATGATATCCAAAAAATTCTGATT--------TGACAAATATT----------TTGATTGGTTAAAATTTCATCACCAGA
CTAGAAGTGTTGGACGCGCTTTGCTGCGCTGTTGTTATTGTTGTTGTTAGGTTTTTTCAAAAAATAATCACCATGTTTCA
AAATATATGGTTCTATTACTTTTTGAAAAAGTCAAACCTTTTAAATTCAGAGAACATTCTTGCTAAGTCTCCGTCGACTG
AGACTTCTTTAAGTCTCAGTCGATGCTTTATCTATGAGATCATATATTGAGATCCGTGCAAAGTTATGTCATTTGGCTGA
GACTTGGTTAAATCTCAGTCAACTGAGATGTAGCCATACCCTTCAGAGAAATATATCAAAATCACATATTATCAAATCGG
TATTTTGAAATTCATCATGAAATGAATTTCCATATTTTTTTTATACTGTGGATGTCGATATTTTGCTCTGAGCTTGGTCA
AAGTAGAAGAAATTTGATTTTCTACAAAATTAATACCCCTTATATTTTGAAATTGATGAAATGTTTAGTTTGGCGGGTGG
TGGAGATGATATAGTGCGTTTTATTTTTATTTATAATGCGAAGATTTGATGGGGTTTTTTGGTGTGATTTCGAGTTATCC
ACTAACCAACCTATATTTATATTGAGAAATTTCGGTGTCGGTGGTCGCATATACTATTATATTGGTGCTATAATATCACA
TGGTGTACAATTATATTGGTGCTGCAATATTACATGGTGGCTCTTCTTTTTTCCAAGTGGTGTTGGGAGGGTGTGTGGGA
TTGATATGTTTTTATAGGCTGTTGCTGCTGATTGATTTGAAAAATCGTTGGCCTGGTCAAAATCATAAGCCAAATCCAAA
ATTGAATACCTCAATTAAATAAAACACCTTAAAATTAGGCATAGTGAATTAAAAGAATTGAATGTCAGAGCTTGAGAAAG
TGTTGACCCGGTCAAAACGGTTAACCCAATTCTAAATCGAATACCTCAACCAATTGCGAGGCCATAAAAATTAGGAAGCG
TAGTGTATAGGTCCTGTTTGGTTCAGCTTTTATCTACGAATTCCACTGCCGCGCAGCAGAATCCGAACCAAAGGGCGAAC
CCAGCAGAATCCGATTCCAAAAATCCACTGCCAAAATCTGAACCAAAAGCAAAAGCAGCCCAGGATGTGCTTTCCAAAAT
CTGATTCCGCTGCGGGCCAAAATCTGAAAAAGCAGTATCCGCTGGTTTGCCAAATAACCTACATCTTTTTCACATCAGAT
TTTTCACAGCTGTTTTTCCACAGCAGATTTTTCACAATTGCTTTTAGAAATCCACAGCCGAACCAAACAGGACCATAGTA
TAAAAGAATGAATGAGAGAATTTTAAAAAATTGTTGACCCGGTCAAAATAGGGTGACCCAATTTTAATTGGAGACCTCAA
TTCAATATGGGCTCTTTAAAACTAAGGAGTTTAGGCCTTTTTGGTTTGGAAGAATCTTGTAGTAATTTCACAGGATAGTA
TTTCTATAGAAAAAATTTCTTGGAGCCCTTTGGTTTGTAGGAATGGAATCATATTTCTATGAAGGAATTCTTCCTATCCT
CCATATTTTATAGGAAAATAAACATTAGCCTAGACTCAATGGAAAAAATCCTATAATGTGAATCAAAGGGCATCTCCTTT
CCTATTCCTACTCATAGGATTTGAGATACATGTCATCTTATTTGCCATGACTTTCCTATTCCTATGATTTTCCTACCCTA
TAAACCAAAGGAGGCCTTAGTGTTAGAGAGGATGACATTGGTGAAAAACATGGCAAAAACAAAACCAATGATCCAAACTG
CTAGTATTAAGTTTTGTTTTGAAATTATTTTTTATTTTACTATTCACCCGAACTCACATGAGCTTGGAATCAT-------
-------------AGGCATCTTCAAAGCCGACCCTCAAATTGCCTGCATACGTACGGACAAGCTGTCCGGACATACTTTG
TCATCCGACGTGGGCAGGTATATGTCCATGTCTA-----TTTTCTAAACCACAAAGACGGCCCTGGCCCACTCAAAACCA
CACCCCGAGCTCGTATCTTAGTCCCTTCCCTCTTGTCCTCCTTTGCTCTGCATCCGCTTTCTACCGGGCCGATGTCGCCC
TA-TACCACCTCGGCAGCCTGCTAAGTCCTCGTTGGACCTCCGCCGGTCCACACGGTCGCCATACTAGTTTGCCTATGCT
GCCGTTCCACCTCTCGTCCATCCGTCGCGTAGGTACCATCCGCCCCAGCACATGTCGTCCGTGAGGTCACTACGCCTGGC
AAGTGCTTGGTGATATGCCCGTGCTAAATTTT
>chr1A_1536
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----------------------------------------------------------------------ACCAGCGCCG
GCTGTGGGTCAAGGACCGGTCCAGCGAGTGGTGGGAGCTGCGGAGCAGCCCGGGGTACCCGGAGGCGGAGTTCTTGCGGG
AGTTCCGGATGGGCCGCGCCACGTTCGGCATGGTCTGCGACGCGCTCGGCGCCGCCGTCGCCAAGGAGGACACGGCGCTC
CGCGCCGCCATCCCGGTGCGGCAGCGCGTGGCCGTCTGCGTCTGGCGGCTCGCCACGGGCGAGCCGCTCCGGCTCGTCTC
CAAGCGGTTCGGCATCGGCATCTCCACCTGCCACAAGCTGGTCCTGGAGGTGTGCGCCGCCATCCGCTCCATCCTCATGC
CGCGCTTCCTCCGGTGGCCCGACCGCGGCTCCGCCGCCGCCGCCGCCGTCAAGGCCAGCTTCGAGGCCAGCTCCGGGGTG
CCGGACGTGGTGGGCGCCATGTACACCACCCACATCCCCATCATCGCGCCCAAGGTGCACGTCGCCTCCTACTTCAACCG
CCGGCACACGGAGCGCAACCAGAAGACGTCCTACTCCATCACGCTGCAGGGGGTGGTCGGCCCGGACGGCTCCTTCACCG
ACGTCTGCATCGGCTGGCCGGGGTCCCTGGCCGACGACCAGGTGCTCGACAAGTCGGCGCTGCAGCAGCGCGCCGCGGCC
GGGATGATGGAGGGGTCCTGGGTGGTCGGCGGCGCCAGCTACCCGCTCACCGACTGGTGCCTCGTCCCCTACACCCACCA
GAACCTCACCTGGACGCAGCACGCCTTCAACGAGAAGGTGGCCGACCTCCGGGGGGTGGCCGTGGACGCCTTCTCGAGCC
TCAAGAGCCGGTGGGCGTGCCTGCAGAAGCGCACCGAGGTGAAGCTCCAGGACCTGCCCGTGGTGCTCGGCGCCTGCTGC
GTGCTCCACAACATCTGCGAGGCCAGAGGGGAGGCCATGCCGCCGGAGCTCCGGGTGGAGGTGGAGGACGACCTCACCGT
GCTGGACAACCCCGTGCGCTCCGACGCCGCCGCCAAGGCCAGGGACAAGATCGCGCACAACCTCCTCCACCGCGGCCTCG
CCGGCAC-------------------------------------------------------------------------
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>chr1D_1536
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----------------------------------------------------------------------ACCAGCGCCG
GCTGTGGGTCAAGGACCGGTCCAGCGAGTGGTGGGAGCTGCGGAGCAGCCCGGGGTACCCGGAGGCGGAGTTCCTGCGGG
AGTTCCGGATGGGCCGCGCCACGTTCGGCATGGTCTGCGACGCGCTCGGCGCCGCCGTCGCCAAGGAGGACACGGCGCTA
CGCGCCGCCATCCCGGTGCGGCAGCGCGTGGCCGTCTGCGTCTGGCGCCTGGCCACCGGCGAGCCGCTCCGGCTCGTCTC
CAAGCGCTTCGGCATCGGCATCTCCACCTGCCACAAGCTGGTCCTCGAGGTGTGCGCCGCCATCCGCTCCATCCTCATGC
CGCGCTTCCTCCGGTGGCCGGACCGCGGCTCCGCCGCCTCCGCCGCCGTGAAGGCCAGCTTCGAGGCCAGCTCCGGCGTG
CCGGACGTGGTGGGCGCCATGTACACCACCCACATCCCCATCATCGCGCCCAAGGTGCACGTCGCCTCCTACTTCAACCG
CCGGCACACGGAGCGCAACCAGAAGACGTCCTACTCCATCACGCTGCAGGGGGTGGTCGGCCCCGACGCCACCTTCACCG
ACGTCTGCATCGGCTGGCCGGGCTCGCTCGCCGACGACCAGGTGCTCGACAAGTCGGCGCTGCAGCAGCGCGCCGCGGCC
GGGATGATGGAGGGGTCCTGGGTGGTCGGCGGCGCCAGCTACCCGCTCACCGACTGGTGCCTCGTCCCCTACACCCACCA
GAACCTCACCTGGACGCAGCACGCCTTCAACGAGAAGGTCGCCCAGCTCCGGGACGTGGCCGTCGACGCCTTCTCGCGCC
TCAAGAGCCGCTGGGCCTGCCTGCAGAAGCGCACCGAGGTGAAGCTCCAGGACCTGCCCGTGGTGCTCGGCGCCTGCTGC
GTGCTCCACAACATCTGCGAGGCCAGAGGGGAGGCCATGCCGCCGGAGCTACGGGTGGAGGTGGAGGACGACCTGGCCGT
GCTGGACAACCCCGTGCGCTCCGACGCCGCCGCCAAAGCCAGGGACAAGATCGCGCACAACCTCCTCCACCGCGGCCTCG
CCGGCAC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------
>chr1B_1536
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------ACCAGCGCCG
GCTGTGGGTCAAGGACCGGTCCAGCGAGTGGTGGGAGCTGCGGAGCAGCCCGGGGTACCCGGAGGCGGAGTTCCTGCGGG
AGTTCCGGATGGGCCGCGCCACGTTCGGCATGGTCTGCGACGCGCTCGGCGCCGCCGTCGCCAAGGAGGACACGGCGCTC
CGCGCCGCCATCCCCGTCCGGCAGCGCGTGGCGGTCTGCGTGTGGCGGCTCGCCACCGGCGAGCCGCTCCGGCTCGTCTC
CAAGCGCTTCGGCATCGGCATCTCCACCTGCCACAAGCTGGTGCTGGAGGTGTGCGCCGCCATCCGCTCCATCCTCATGC
CGCGCTTCCTCCGCTGGCCGGACCGCGGGTCCGCCGCCGCCGCCGCCGTGAAGGCCAGCTTCGAGGCCAGCTCGGGCGTG
CCGGACGTGGTGGGCGCCATGTACACCACCCACATCCCCATCATCGCGCCCAAGGTGCACGTGGCCTCCTACTTCAACCG
CCGGCACACGGAGCGCAACCAGAAGACGTCCTACTCCATCACGCTGCAGGGGGTGGTCGGCCCCGACGCCGCCTTCACCG
ACGTCTGCATCGGCTGGCCCGGGTCCCTGGCCGACGACCAGGTGCTCGACAAGTCGGCGCTGCAGCAGCGCGCCGCGGCC
GGGATGATGGAGGGGTCCTGGGTGGTCGGCGGCGCCAGCTACCCGCTCACCGACTGGTGCCTCGTCCCCTACACCCACCA
GAACCTCACCTGGACGCAGCACGCCTTCAACGAGAAGGTCGCCGATCTCCGGGGGGTGGCCGTCGACGCCTTCTCGCGCC
TCAAGAGCCGCTGGGCCTGCCTGCAGAAGCGCACCGAGGTGAAGCTCCAGGACCTGCCCGTCGTGCTCGGCGCCTGCTGC
GTGCTCCACAACATCTGCGAGGCCAGAGGGGAGGCCATGCCGCCGGAGCTCCGGGTGGAGGTGGAGGACGACCTGGCCGT
GCTCGACAACCCCGTGCGCTCCGACGCCGCCGCCAAGGCCAGGGACAAGATCGCGCACAACCTCCTCCACCGCGGCCTCG
CCGGCACCGCCTTCTTCTAAT-----------------------------------------------------------
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--------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------
-----------------------------------------------------------------S--------------
----------------------------S---------------------------------------------------
----S-------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
----------------------------------------------------------------SS--------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------SSSSS---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-------S-----S------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
-----------------S----------------------------------------SSSSSSSS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S-S--------
----S---S----------------------------------SSSSSSSSSS---------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S------------------------S------
------------------------------------------------S----S--------------------------
---------------------------------------------------S----------------------------
----S----S------------------------SS--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>forward_59
---------------------------------------GACAGAAGGAAAAGCCGGGA---------------------
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--------------------------------
>reverse_1397
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------TAACAAGTCGCAGGCCATGA------------------------
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--------------------------------
>forward_94
--------------------------------------------------------------------------ACAAAA
GGAGAGGAAGCCGG------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>reverse_1661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AGAGGCAGAGTTTCGGCG--
--------------------------------------------------------------------------------
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--------------------------------
>forward_268
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GTCCGGGTAGTCTGAAGGGA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------
>reverse_2688
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TCTTGGGTACAGATAAATTAAACATGC------
--------------------------------------------------------------------------------
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--------------------------------
>forward_429
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GCTGTAGGCCTACCACCAAT---------------------------------------------------
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--------------------------------
>reverse_2818
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------TCAGTAGCTGCTGTCGGTTAC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
