>input_sequence_46346
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ATGGAGGCCCGGAACGCCATTGCGCTGCTCCTCGCGCTCGTGGTCGCCGCGAGCTTCCTCTGCGACGGCGTCCACAGCCG
CCACCACCATCACACGAAGCGCCACTCGGTGCGGCCGCCGTCCCACGCACCCGGGCCTTCGGGCCCGAGGCGTGCTCCTT
CGCCTAGGCACTCGTCTCCGTCCGCGCCGCCGCCGGCCAGGACGCCGCCGTCGGCCCCTCCAATGCCGGGC---------
------CCGTCGGACGACGGCGACAACGTGTACGATGTCATCAAGGACTTCGGCGCGGTCGGAGACGGCGTGACGGACGA
CACGGACGCGATCAAGACCGCGTGGGACACGGCGTGCCAGGACGACGGGGAGGGCGTCGTCCTCGCGGCCGCCGGGCACT
CGTTCCTGGTGCACACCACCACCTTCACCGGGCCGTGCCAGGGCAGCGTCACGCTGCAGATCGACGGCACTATCGTGGCG
CCGAGCGAGCCCACGACGTGGCCGGCCAACAGCAAGCGTAACTGGCTCGTGTTCTACAAGGCCGACGGCATGGCGCTGCG
CGGCTCCGGGCTCATCGACGGCAAGGGGCAGAAGTGGTGGGATCTCCCCTGCAAGCCTCACAAGGGAGGAAGCACCCACG
GACCTTGTGACAGCCCAGTGGTGAGTGGCCTAACCCAGCCACGTACTACGTACTGCTTCAAGCCTTTAACAGTATTATTA
TTAAATGGCCAGTGAGTGCTAGATAACTGACGTTGATCTCCTCTCCAGGCGCTTAGGTTTTTCATGAGCAACAACGTGAC
GGTGCAAGGGCTCAGGGTGCAGGACAGCCCGGAGTTCCACTTCCGGTTCGACAGCTGCCGCGGCGTGCACGTCGACAGCC
TCTCCATCAGCTCCCCGGCGCTGAGCCCCAACACCGACGGCATCCACGTCGAGAACACCCAGGACGTCCTCATCACCAAC
ACCGTCGTCTCCAACGGCGACGACTGCGTCTCCATCGGCGCCGGCACCCTCAACGTCCACATCGAGAACGTCACCTGCGG
CCCCGGGCACGGCATCAGGTTCGCATCCAGTTCATTCTTCCTAGTAGCTTTTCTTCAGATGTTATATATA---TACTCCA
GTGGCATTGA---CTGACATTTGAGTGCTCTCATC----GCAGCATCGGGAGCCTGGGGAAGCAGGGGTCGCGGGCGTGC
GTGGCCAACATCACGGTGCGGAACGCGGTGATCCGGCACTCGGACAACGGCGTGAGGATCAAGACGTGGCAGGGCGGCTC
TGGGTCGGTGTCGGCGGTGACCTTCGAGAACGTGCGCATGGACGCCGTGCGCAACCCCATCATCATCGACCAGTACTACT
GCCTCACCAAGAGCTGCGAGAACGCCACCACCGCCGTCTTCGTCTCCGATATCACCTACGCCGGCATCCGGGGCACCTAC
GACGTGCGCGGCCCGCCCATCCACTTCGGCTGCAGCGACGCCGTGCCCTGCACCAACATCACCCTCTCCGGCGTCGAGCT
GCTGCCCGCCTCCGGCGACACCGTCGACAGCCCCTTCTGCTGGAACGTCTACGGCAATACCACGACGCCCATTGTGCCGC
CGGTGGCGTGCCTCATAGAGGGCGTGCCCAGGAACGTGGATGATACCAGCAGCTTGAAGTGTTACTGA------------
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-------------------------------------------------------------------
>chr1D_1_TraesCS1D01G311000
ATGTGCAAAAGGAGATCGG----TCCATCCAGCATGGGAGCTGGAGGCAAGCTGCATGCATGCTAGCTAGGCTGGTCGTA
TCTCAGTTGTCGTAGATA------GATAGCAATTGCTAGGGGGGCAAAATAGAGGAAGAAGCTGCAGAAGCTGGGTTGGT
TCGGCTGGAGAGCAAACCGCTAGGCTCGGCCGGTAGGGCAACGGTACCACGGCTGTGGGTGTCAGTGTGCACGTACGTCT
GCTTGGCCTCCGTTCGATCAAGGTTAATCGCCGAAAAGTGCG-GGAGGGAGGCGCCCAGTGAATGCTGGAGATGACCAGG
AGGAGGATCCTCTAACGTTCGGCACCCTGCCATTCTTCTACTGACATGTGGGCCCATATGTCAGTGGCCCAAC-----GG
CACACAGGGCACGGCAGAGGAATCCAGCACGACTAAGAGCTGCCCGGCCACATATAGTTGCACTCAAAATTTTGTTTCTT
TTCTATTGGAAGATAGGGTGATCCT----CCATTTCCATTAATAGAAACCAAAAGCTGCAATTATTC-AACACACAACAC
CACCGAAAGCATAGTCGTTACACTCAGCAGTACACGATTGGAAATCGGTTTGCAGATCATTTATCGTGCATGCAAGCGAG
CACAAGTCCAACCACGATCGAACACTCCTCCTTCGGCGCGCGCGTGCACGCCCTGCCGCCCATGCGCGCACCACCACCAG
TCCACCACCACGCTTCTTGACACTGTGGTGCA-CTTTGGCTCCCATGCCAGCCTATATATCCATGTACCCGCGCTCCTCA
CTCTCTCAAACCCAACTGCCACTAACTGTCCAG---CTCC-----TCTACTCCAGTATAGCATAGCGTCCA----AGCTA
GCTAGTGGCTAGATTCCCGGGACAGCAGCGAT------CTCGGCCTTCCTCTGGGCGTCTATATATAAGCAGGCCTAGTG
ATCCGAGATTAATCCATCCTTGAGCTGAATCCAATCCAGCCAACAGAAGCAAATTCATCAGCTTGCAGCACTTTGCTCTA
ATGGAGGCCCGGAACGCCATTGCGCTGCTCCTCGCGCTCGTGGTCGCCGCGAGCTTCCTCTGCGACGGCGTCCACAGCCG
CCACCACCATCACACGAAGCGCCACTCGGTGCGGCCGCCGTCCCACGCACCCGGGCCTTCGGGCCCGAGGCGTGCTCCTT
CGCCTAGGCACTCGTCTCCGTCCGCGCCGCCGCCGGCCAGGACGCCGCCGTCGGCCCCTCCAATGCCGGGC---------
------CCGTCGGACGACGGCGACAACGTGTACGATGTCATCAAGGACTTCGGCGCGGTCGGAGACGGCGTGACGGACGA
CACGGACGCGATCAAGACCGCGTGGGACACGGCGTGCCAGGACGACGGGGAGGGCGTCGTCCTCGCGGCCGCCGGGCACT
CGTTCCTGGTGCACACCACCACCTTCACCGGGCCGTGCCAGGGCAGCGTCACGCTGCAGATCGACGGCACTATCGTGGCG
CCGAGCGAGCCCACGACGTGGCCGGCCAACAGCAAGCGTAACTGGCTCGTGTTCTACAAGGCCGACGGCATGGCGCTGCG
CGGCTCCGGGCTCATCGACGGCAAGGGGCAGAAGTGGTGGGATCTCCCCTGCAAGCCTCACAAGGGAGGAAGCACCCACG
GACCTTGTGACAGCCCAGTGGTGAGTGGCCTAACCCAGCCACGTACTACGTACTGCTTCAAGCCTTTAACAGTATTATTA
TTAAATGGCCAGTGAGTGCTAGATAACTGACGTTGATCTCCTCTCCAGGCGCTTAGGTTTTTCATGAGCAACAACGTGAC
GGTGCAAGGGCTCAGGGTGCAGGACAGCCCGGAGTTCCACTTCCGGTTCGACAGCTGCCGCGGCGTGCACGTCGACAGCC
TCTCCATCAGCTCCCCGGCGCTGAGCCCCAACACCGACGGCATCCACGTCGAGAACACCCAGGACGTCCTCATCACCAAC
ACCGTCGTCTCCAACGGCGACGACTGCGTCTCCATCGGCGCCGGCACCCTCAACGTCCACATCGAGAACGTCACCTGCGG
CCCCGGGCACGGCATCAGGTTCGCATCCAGTTCATTCTTCCTAGTAGCTTTTCTTCAGATGTTATATATA---TACTCCA
GTGGCATTGA---CTGACATTTGAGTGCTCTCATC----GCAGCATCGGGAGCCTGGGGAAGCAGGGGTCGCGGGCGTGC
GTGGCCAACATCACGGTGCGGAACGCGGTGATCCGGCACTCGGACAACGGCGTGAGGATCAAGACGTGGCAGGGCGGCTC
TGGGTCGGTGTCGGCGGTGACCTTCGAGAACGTGCGCATGGACGCCGTGCGCAACCCCATCATCATCGACCAGTACTACT
GCCTCACCAAGAGCTGCGAGAACGCCACCACCGCCGTCTTCGTCTCCGATATCACCTACGCCGGCATCCGGGGCACCTAC
GACGTGCGCGGCCCGCCCATCCACTTCGGCTGCAGCGACGCCGTGCCCTGCACCAACATCACCCTCTCCGGCGTCGAGCT
GCTGCCCGCCTCCGGCGACACCGTCGACAGCCCCTTCTGCTGGAACGTCTACGGCAATACCACGACGCCCATTGTGCCGC
CGGTGGCGTGCCTCATAGAGGGCGTGCCCAGGAACGTGGATGATACCAGCAGCTTGAAGTGTTACTGATGAGCGACGTCA
CGCCGTCGCACGTCCCTTATAGATAAGGAAGTAATTGAAACCAGAG---GAAATATATTAGGCCAGAAAAAAA-C-TTAG
TTAAAGCTTGGTCGTGTAGTAT----ATTACCTATATAGTGTATATAGAAAGAAGAAAATGTAACAGTATGAGATGATTT
GTGTGACAGTTACCAGA--ATATACATGCAAAATGTTCTGTAACCT---------TATA---GTACTTCTTTCTTGTCAA
CTT-------ATAGTGCATATAATAATTTTCAAGAAAATAAACTCTATAAAAACTTGTTTTTTTTGAGAGAAACTTCAAT
TATTCATCATTCGCAATGGCAGTTCAAGGACACCCGAAATAACAAAAATTATATTCAGGTTCGTAGACCACCTAGCGACA
ACTACAAGCACTGGGACAAGAAGAAGGCGCACCGCCGTCATTGTCCCCCTCCCACCGAAGCCAGGAAAACTTGTTGCACT
AGACACTCGAGAAGTCGTCGTGCTAAGGACCAGCGCACCAGAACAGCATCCGCTGCAGATGAAGGGAAGTGGCGTGCATG
TGTTCATAGGGATGCGTGTATGTATGTGTTTGTGAGCATATGCGTCTGTAATTTGTTTCTTAATTTTTTT-----TGGAT
ATACCTCATCTATTTTTTCTACTAGCACATGAATCGGCTCGGAATTTCATCTAGACTTTTCTAACAAAAATTATCGTCAT
GAAGTCTGTGAACAAGTACACTCATGGTTTCCCCGCAAAAAAAAACAAGTATACTCATGGTTTTATGAAATCTATAATTC
CATATTGTGACCCTGAAAGATAGTCTACGGACATGAACATATTTTTTGTTATTTCTATGTTCTTCGTATTGCCA----TG
GCATAATGAATAGATTGGAAATTTCCTCGAAAAAAAAATATTGGACCCTTCTTTAAGCTCTGGAATCATCAGAACCATGA
TCAAGCTCTGTGGCACATTTTGCGCAGGATCTAGCATAGATCCTCGCACCTGTGTCAACAATGTACA
>chr1B_1
ATGTGCAAAAGGAGATCGG----TCCATCCAGCATGGGAGCTGGAGGCAAGCTGCATGCATGCTAGCTAGGCTGGTCGTA
TCTCAGTTGTCGTAGATA------GATAGCAATTGCTAGGGGGGCAAAATAGAGGAAGAAGCTGCAGAAGCTGGGTTGGT
TCGGCTGGAAAGCAAACCA----GCTAGGCCGGTAGGGCACT------ACGGATGTGGGTGTCAGTGTGCACGTACGTCT
GCTTGGCCTCCGTTCGATCAAGGTTAATCGCCGAAAAGTGCGAGGAGGGAGGCGCCCAGTGAATGCTGGAGATGACCAGG
AGGAGGATCCTCTGACGTTCGACACCCTGCCGTTCTTCCACTGACATGTGGGCCCATATATGAGTGGCCCAAC-----GG
CACACAGGGCACGGCAGAGGAATCCAGCATGGCCAAGAGTTGCCCGGCCACATATAGTTGCACTCAAAATTTTGCTTCTT
TTCTATTCAAAGATAGGGTGATCCT----CGATTTCCATTAATAGAAACCAAAAGCTACAGTTATTCAAACACACAACAC
CACCGAAAGCATAGTCGTTGCACTCAGCAGTACACAATTGGAAATCGGTTTGCAGATCATTTATCGTGCATGGTAGCGAG
CACAAGTCCAGCCACGAACC----CTCCTCCTTCGGCGCGCGCGTGCACGCTCTGCCGTCCATGCGCGCACCACCACCAG
TCCACCACCGCGCTTCTTGACACTGTAGTACATCTTTGGCTCCCATGCCAGCCTATAAATCCATGTACTCGCGCTCCTCA
CACTCTCAAACCCAACTGCCACTAACTGTCCAGCTCCTCC-----TCTGCTTCAGTATAGCATAGCGTCCAAGCTAGCTA
GCTAGTGGCTAGATTCCCGGGACAGCGCTCG----CGCCTCGGCCTTCCTCGGGGCGTCTATATATAAGCAGGCCTAGTG
ATCCGAGATTAATCCATCCTTGAGCTGAATCG-----AGCCAACACAAGCAAATTCATCAGCTTGCAACGCTTTGCTCTA
ATGGAGGCCCGGACCGCCATTGCGCTGCTCCTCGCGCTCGTGGTCGCCGCGAGCTTCCTCTGCGACGGAGTTCACAGCCG
CCACCACCACCACACCAAGCGCCACTCCGTGCGGCCGCCGTCCCACGCACCCGGACCTTTAGGCCCGAGGCGGGCTCCTT
CACCGAAGCATGGGTCTCCATCCGCGCCGCCGCCAGCCAGGACGCCGCCGTCGGCCCCTCCAATGCCGGGCGCGCCCGCG
CCGGCCCCGTCCGACGACGGCGACAACGTGTACGACGTCATCAAGGACTTCGGCGCCGTCGGGGACGGCGTGACGGACGA
CACGGACGCGATCAAGACCGCGTGGGACACGGCGTGCCAGGACGACGGGGAGGGCGTCGTCCTCGCGGCCGCCGGGCACT
CGTTCCTGGTGCACACCACCACCTTCACCGGGCCGTGCCAGGGCAGCGTCACGCTGCAGATCGACGGCACGATCGTGGCG
CCGAGCGAGCCCACGACGTGGCCGGCCAACAGCAAGCGTAACTGGCTCGTGTTCTACAAGGCCGACGGCATGTCGCTGCG
CGGCTCCGGGCTCATCGACGGCAAGGGGCAGAAATGGTGGGATCTCCCCTGCAAGCCTCACAAGGGAGGAAGCACCCACG
GACCTTGTGACAGCCCGGTGGTGAGTGGCCAAACCCAGCCACGTAC----TACTGCTTCAAGCCTTTAACAGTATTATTA
----ATGGCCAGTAAGTGATGGATAACTGACGTTGATATCCTCTCCAGGCGCTTAGGTTTTTCATGAGCAACAACGTGAC
GGTGCAAGGGCTCAGGGTGCAGGACAGCCCGGAGTTCCACTTCCGGTTCGACAGCTGCCGCGGCGTGCACGTCGACAGCC
TCTCCATCAGCTCCCCGGCGCTGAGCCCCAACACCGACGGCATCCACGTCGAGAACACCCAGGACGTCCTCATCACCAAC
ACCGTCGTCTCCAACGGCGACGACTGCGTCTCCATCGGCGCCGGCACTCTCAACGTCCACATCGAGAACGTCACCTGCGG
CCCCGGGCACGGCATCAGGTTCGCACCCATTTCATTCCTAGCCGTAGCTTTTCTTTATGTTG----TATA---CACTCCA
GCGGCATTATTTGCTGACATTGG-GTGCTATCATC----GCAGCATCGGGAGCCTGGGGAAGCAGGGGTCACGGGCGTGC
GTGGCCAACATCACGGTGCGGAACGCGGTGATCCGGCATTCGGACAACGGCGTGAGGATCAAGACGTGGCAGGGCGGCTC
CGGTTCGGTGTCGGCGGTGACCTTCGAGAACGTGCGCATGGACGCCGTGCGCAACCCCATCATCATCGACCAGTACTACT
GCCTGACCAAGAGCTGCGAGAACGCCACCACCGCCGTCTTCGTCTCCGACATCACCTACGCCGGCATCCGGGGCACCTAC
GACGTGCGCGGCCCGCCCATCCACTTCGGCTGCAGCGACGCCGTGCCGTGCACCAATATCACCCTCTCCGGCGTCGAGCT
GCTGCCCGCCACCGGCGACACCGTCGACAGCCCGTTCTGCTGGAACGTGTACGGCAACACCACGACGCCCATTGTGCCGC
CGGTGGCGTGCCTCATAGAGGGCGTGCCCAGGAACGTGGATGATACTAGCAGCTTGAAGTGTTACTGATGAGCGACGTCA
CGCCGTGGGACGTTCCTTATAGATAAGGAGGTAACTAAAACCAGAGAAAAAAATATATTAGGCCAGGAAAAAAACTTTAG
TTAAAGCTTGGTCGTGTAGTAT----ATTACCTATATATTGTATATAGAAAGATGAAAATGTAACAGTATGAGATGATTT
GTGTGACAGTTACCAGAGAATATACATGCAGAATGTTCTGGAACTTCTGTTACCATATACTAGTACTTCTTTCTTGTCGA
CTTATATAGTATAGTGCATATAATATTTTTCAAGAAAATAAACTCTATAATAACTTTTTTTCCA--AGAGAAACTTCCAT
TATTCATCATTGGCAATGGCAGTACAAGGACACAAGAAATAACATAAATTATATACAGGTTCGTAGACCACCTAGCGACG
ACTATAAGCACTAGGGCAAGAAGAAGGTGCACCACCATCATTGTCCCACTCTCATCGAAGCCAGGAACACTTGTTGTAGT
AGGCATTCGAGAAGTCGTCATGCTAAGGACCAGCACACTAGAACAACAACCACCACAGATGAAGAGAAGTGGCATGTGTG
TGTTCGA---GATGAGTGTATGTATGTGTTTGCAAGCATCACAC-CTGTAATGTGTTTCTTAATTTTTT--TTTTTGGAT
ATACCGCATCAATTTTTTCTACTAGCACATGAATCGGCTCGGGATTTCATCTAGACTTTTCTAACGAAAACTAACTTCGT
GAAGTCTGTGAACAAGTACACTCATGGC---------------------------------TTTATGAAATCTATAAGTC
CATATTGTGGCCCTGAAAGATGGTCTACGGACATGGACATTTTTTTTA--ATTTCTGTGTTCTTTGTAGAGACTGCTGTG
GCATAATGAATGGATTGAAAATTTCCTCGAAAAAAAAAGATTAGACCCTTCTTTAAGCTCTGGAATCATCAGAGCCATGA
TCAAGCTCGGTGACACATTTTCCGCAGGATCTAGCATTGTTCCACGCATCTCTGTCGACAATGTACA
>chr1A_1
ATGTGCAAAAGGAGATCGGTCCATCCATCCAGCATGGGAGCTGGAGGCAAGCTGCATGCATGCTAGCTAGGCTGGTCGTA
TCTCAGTTGTCGTAGATAAGAGTAGATAGCAATTGCTAGGGGGGCAAAATAGAGGAAGAAGCTGCAGAAGCTGGGTTGGT
TCGGCTGGAAAGCAAACCA----GCTAGGCCGGTAGGGCAACGGTACCACGGT------TGTCACCGTGCACGTACGTCT
GGCCGGTCTC------ATCAAGGTTGATCGCCGAAAAGTGGGAGAAGGGAGGCGCCCAGTGAATGCTGGAGATGACCAGG
AGGAGGATCCT------------ACCCTGTCGTTCTTCCATTGACATGACCCATATGAAAACTGGTTCACATGTCACTGG
GACACACAGCACGGCAGAGGAATCCAGCACGACCAAGAGTTGCCCGGCCACATATAGTTGCACTCAAAATTTTGCTTCTT
TTCCATTCAAAGATAGGGTGATCCTCTCTCGATTTCCATTAATAGAAACCAAAAGCTACAATTATTCAA-CACACAACAC
CACCGAAAGCATAGTCGTTGCACTCAGCAGTACACAAATGGAAATCGGTTTGCAGATCATCGATCGTGCATGGTAGCGAG
CGCAAGTCCAACCACGAACC----CCCCTCCTTCGGCGCGCGCGTGCACGCCCTGCCGCCCATGCGCGCACCACCACCAG
TCCACCACCACGCTTCTTGACACTGTAGTACATCTTTGGCTCCCATGCCAGCCTATAAATCCATGTACGCGCGCTCCTCA
CTCTCTCAAACCCAACTGCCACTAACTGTCCAGCTCCTCTGCTCATCTACTCCAGTATAGCACAGCGTCCAAGCTAGCTA
GCTAGTGGCTAGATTCCCGGGACAGCGCTCGATCGCGCCTCGGCCTTCCTCTGGGCGTCCATATATAAGCAGGCCCAGTG
ATCCGAGATTACTCCATCCTTGAGCTGAATCTAACCAACGCGAGCAAG-----TTCATCAGCTTGCAACGCTTTGCTCTA
ATGGAGGCCCGGACCGCCATTGCGCTGCTCCTCGCGCTCGTGGTCGCCGCGAGCTTCCTCTGCGACGGCGTCCACAGCCG
CCACCACCACCACACCAAGCGCCACTCCGTGCGGCCGCCGTCCCACGCACCCGGGCCTGCGGGACCGAGGAGGGCACCTT
CACCTAAGCATGGGTCTCCGTCTGCACCACCGCCGGCCAGGACGCCACCGTCAGCCCCTCCAATGCCGGGCGCGCCCGCG
CCGGCCCCGTCCGACGATGGCGACAACGTGTACGACGTCATCAAGGACTTCGGCGCGGTCGGGGACGGCGTGACGGACGA
CACGGACGCGATCAAGACCGCGTGGGACACGGCGTGCCAGGACGACGGGGAGGGCGTCGTCCTCGCGGCCGCCGGGCACT
CGTTCCTGGTGCACACCACCACCTTCACCGGGCCGTGCCAGGGCAGCGTCACGCTGCAGATCGACGGCACGATCGTGGCG
CCCAGCGAGCCCACCACGTGGCCGGCCAACAGCAAGCGCAACTGGCTGGTGTTCTACAAGGCCGACGGCATGGCGCTGCG
CGGCTCCGGGCTCATCGACGGCAAGGGCCAGAAGTGGTGGGATCTCCCCTGCAAGCCTCACAAGGGAGGAAGCACCCACG
GACCTTGTGACAGCCCGGTGGTGAGTGGCCTAACCCAGCCACGTAC----TGCTGCTTCAGGCCTTTAACAGTATTTTTA
----ATGGCCAGTAAGTGCTAAACGCCGGACGTTGATCTCCTGTGCAGGCGCTTAGGTTTTTCATGAGCAACAACGTGAC
GGTGCAAGGGCTCAGAGTGCAGGACAGCCCGGAGTTCCACTTCCGGTTCGACAGCTGCCGCGGCGTGCACGTCGACAGCC
TCTCCATTAGCTCCCCGGCGCTGAGCCCCAACACCGACGGCATCCACGTCGAGAACACCCAGGACGTGCTCATCACCAAC
ACCGTCGTCTCCAACGGCGACGACTGTGTCTCCATCGGCGCCGGCACCCTCAACGTCCACATCGAGAACGTCACCTGCGG
CCCCGGCCACGGCATCAGGTTCGCATCCACTTCATTCCTCGTCGTAGCTTTTCTTCGGATGTTATATATACTCCACTCCG
GTGGCATTGC---CTGACATTGG-GTGCTCGCTCTCGTTGCAGCATCGGGAGCCTGGGAAAGCAGGGGTCGCGGGCGTGC
GTGGCCAACATCACGGTGCGGAACGCGGTGATCCGGCACTCGGACAACGGCGTGAGGATCAAGACGTGGCAGGGCGGCTC
CGGGTCGGTGTCGGCGGTGACCTTCGAGAACGTGCGCATGGACGCCGTGCGCAACCCCATCATCATCGACCAGTACTACT
GCCTCACCAAGAGCTGCGAGAACGCCACCACCGCCGTCTTCGTCTCCGACATCACCTACGCCGGCATCCGGGGCACCTAC
GACGTGCGCGGCCCGCCCATCCACTTCGGCTGCAGCGACGCCGTGCCCTGCACCAACATCACCCTCTCCGGCGTCGAGCT
GCTGCCCGCCTCCGGCGACACCGTCGACAGCCCCTTCTGCTGGAACGTCTACGGCAACACCACCACGCCCATTGTGCCGC
CGGTGGCGTGCCTCATAGAGGGCGTGCCCAGGAACGTGGATGAAGCTAGCAGCTTGAAGTGTTACTGATGAGCGACGTCA
AGCCGTCGCACGCCCCTTATAGATGAGGAAGTAATTAAAACCAGAG---AAAATATATTAGGCCAGACAAAAAAC-TTAG
TTAAAGCATGGTCGTGTGTAGTATAAATTACCTATATATTGTATATAGAAAGATGAAAATGTAACAGTATGAGATGATTT
GCGTGACAGTTACCAGA--ATATACA-GCAGAATGTTCTGTAACTTTTGTTACCATATA---TTACTTCTTTCTTGTCAA
CTT-------ATAGTGTATGTAATATTTTTCAAGAAAATAAACTCTATAATAACTTTTTTT-----AGAGAAACTTCCAT
TATTCAACATTCGCAATGGCAGTACAAGGACACAAGAAA-------AATTATATACAGGTTCGTAGACCACC--------
-------------GGGCAAGAAGAAGGCGCACCGCCGTCATTGTCTCCCTCTCACCGAAGCCAAGAAAATTAGTTGTAGT
AGACACTCGAG-AGTCGTCATGCTAAGGATCAGCACACCAGAACAGCAACCGCCACAGATGAAGAGAAGTGGCGCCG-TG
TATTCATAGGCATGAGTGTATGTATGTGTTTGCGAGCATC-GCGTCTGTAATGTGTTTCTTAATTTATTTATTTTTGGAT
ATACCTCATCAATTTTTTCTACTAGCACATGAATCAGCTCGGAATTCCATCTAGAGTTTTCTAACGAAAAATATTTTTGT
GAAGTCTGTGAACAAGTACCCTTATGGC---------------------------------TTTATGAAATCTATAATTC
CGTGTTGTGGCCCTGAAAGATGGTCTATGGACATGAACATAATTTTTATTATTTATGTGTTCTTTGTACTGCCA----TG
GAATAATGAATGGATTGAAAATTTCCTCAGAAAAAAG-GATTAGACCCTTCTTTAAGCTCTGGAATCATCAGAACCATGA
TCAAGCTCGGTGGCACATTTTCCGCAGGATCTAGCATAGTTCCGCGCATCTCTGTCAACAATGTA--
>SNPs
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---------S--------SSSSS---S-------------------------S---------------------------
--------------------------------------------------------------------------------
-------------S-------S---------S------S--------------------S--------------------
---------------------------------S-----S----------------------------------S-----
-------SS---------------------S--------------------------S----------------------
-------------------S---------------S------------------------------------SS------
-----------------S-SSSSS--------------------------------------------------------
--------------------------S--S---------------------------S----------S-----------
--------------------------------------------------------------------------------
--------------------------SSSSSS------------------------------------------------
-------------------------------S--S-S--------S---------------------S-S----------
-------------S------------------------------------------------------------------
---------S-----S-----------S--------------------------------------------S-------
-S----S---SSS-------------------------------------------------------------------
-----------S-----------------------S--------------------------S-----------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
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----------------S-----------------------------SSSS------------------------------
SSSS---------S------------------------------------------------------------------
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-----------------------------S-------S--S-S------------------------------S------
---------S-----------S-S--------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
----------------------------------------------S---------------------------------
------------------------------------S------------S------------------------------
--------------------------------------S--------------S--------------------------
------------------------------S-------------S-----------------------------------
-------------------------S------------------------S-----S----SSSSS-----------S--
-----------------------S---------SS---------S---------S------------------------S
----S-------S--S-----------------------------------S------------------------S-S-
-------------------S--------------S-------------S----SS---------S-----------SS--
--------------S-----------------S------SS-----------S---------------------------
----------S------------------------------------------------------S----S----S--S-
---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
---------S-----------S-------------------------S--------S-------S---S-----------
-----------S-----S--------------------S---S-------------------------------------
--------S------------S-----------------S---S----S--S---------------
>forward_658
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------------------------------------------------------------------------------AG
CACAAGTCCAACCACGAT--------------------------------------------------------------
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>reverse_1764
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---AATGGCCAGTGAGTGCTAGA---------------------------------------------------------
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>forward_908
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--------CTAGATTCCCGGGACAGCAG----------------------------------------------------
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>reverse_2618
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---------------------------------------------------------TACCACGACGCCCATTGTG----
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>forward_1729
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----------------------------CCTAACCCAGCCACGTACTAC-------------------------------
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>reverse_3720
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---------------------------------------ATCCTCGCACCTGTGTCAAC--------
