>input_sequence_46336
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------ATGGG
CAAGAAAGCCGGTGACGCTGAGCAGGCTGGACGCCTCCCTGAGACGTCAACCAGCAACGGCGCCGCGGTTCGTCGATGCA
CCGCTCAAGTGGGCGCGGCTCTCAGCGCTAAGTGCGTCGTCGCGTTGATCCTCGGTGCCGTCGTCTTCCTCTCGGCCTTC
TTCATGCTCCTTCAATTCCGATCACCGGGGAACAGCGTGCCTGATGCCCCCGGCACACTCATCGGTAAGGACGGCTTCTT
TAGCACCAGGTTTCAGCCATGATCAGCTATCTCCAGCCATGTGTGCCTTCCAAAGCTCCATGTCTTCGATAGGAACTATG
CCATGAATCTAGATA----GTAAAATACGAAAACCTCCTTCTCAGTAATAAACCATAGTCAACAATCAGCTACAGCAGTC
AGCAGTTACCATGTTTTGACGACAAAACATTCACTTCTCCAGATGAAATTCAGGCTGGTTTCATCTTGTTGAAGCCACTT
GCGCAACTCGCTCCACATGCCGCGGAGCTACAACAAGAGATAAACCGTCAAATTGGAGTCCCCAACACTACGGTATGCTA
CCACTACCAGCCCCAATTCAAGCCACTCGAGAAGACATGCTGAATACTGACCGAGACAATTCTGCAGGTTTCCGTCTCTA
TGCAGGCATTATTCTTGAGCTTCACTGTTGTAGAATTTGATGTTCTTCCTGACCCAATAAACACCTCCATAAGTGCGCGA
TCCATGCACGCATTGAGGAAAAACTTGATCCAGCTTACACTTCAGCAGCTGAATTTATCGCTGACACCATCGGTCTTCGG
ATATCCATTGTGCGTACAGATGCTGGGGTTCCCAGGAGGGATCACAATAGAATTAGAACCCCTACAGGATGATTCCATTC
TACAAGTTGCACAGCCTATTTTCAATGTCACGCTTGACATGAGCATTCGCCAATTGAGGGGACTGATTGAGGAAATGAAG
GAGGATCTTGGGCATTTACTGGATGAGGTACCATATGAGCTCCCCCCCTTTCTACATCTCATATGGG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TTTT
TTCTTCTTCTGATTAACATCTTTCCTAGAAGATCTTGACATAAAGTGACAACATGCTATCTACATGCAGGACATATACAT
AGATCTGACAAATAAGAATGGCTCAACGATTGCCCCACCAGTTATAGTCCAAGTTTCCCTCTCCCCAGATGACCGC---G
GCGTTTATGAAGAAATGGGGAGGCTGAAACAGCTGGCTGAAATCATCACAGAATCAAGTTCAATGAACCTTGGCCTAGAC
CCATCGGTTTTTGGTAGAATCAAGGATCTCAAGTTGGCTCCGCGTCTGCAAGCCCTCGTTCCATCATTTGCTCCTAGCTC
ATCTCCAACGCAAATGTCATTCACTTCCATGCCTCCATATTCACAGCCAATGCCATCCCCTTCCATGCCTCCATATTCAC
AGCCAAGTAGAACCAATCTTTGTGCACATTGTTCATGCCCTGCTTGGATGAAACTAAATGCAACCAATCCACATCGCGTG
TTAATGCAACTTCCTCCAATGACAATCTCTCTTCAATTACCAACACAGCGTCATAGCGGGAATGGACCTGGGCACAAGCA
AAGTGGCAATGCAATGGCCGCACCAACCTCCATTGCGCCATCATCCCAACCGTAG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr6D_1_TraesCS6D01G309300
TAAGCACTCGTGTAAAGAAATCAGATAGCTGGCTTTGTAAGCATCGGCCAAATACGAGCAAGCATTTT-AATACTGCTAT
TATCTTATCATTCACATGATGTCACCTTGTACGTTTATTGTAATCTTGCTCTATTTTCTATCTTTGT----TTCATTCTG
CTTGCTTTTTTCTAACTGACCTTGCTTTCCGACTCCACAGGCCAAGATAAGAATGCGAGCAAAGTGATAACATGAAAGGG
ATGGCAAACCCCCCTCAAGATCGAAAG---TTCCATTAATTTTTTCCGTAAGATCCAAAAATGGGTTCCACTATCAAGGG
ATAACGGACCAAACAACAAAACTGAGCATCCAAATGCGCCGAACATAAGCG---AAACTAAAATTCAAAAGGTAAAAGTT
CTAGCAAACCAAGTTTTTTGCTAGAACGCTGCCTCGTCTAAGCTAGCA-----GCACGAGATAAAGGTTTTCCATCTCTT
TCGGCATTAACTAAACTACTCCCTCCGTTCCTAAATACTCCCGTATGTAGAGATTTCAATATGAACTACATACAGATGTA
CATAGACGTATTTTAGAGTGTAGATTCACTCATTTTGCTCCGTAC-----------------------------------
--------------------------------------------------------------------------------
------------------------------------------GTATTTAGGAACCGGAGGGAGTATACGG----------
-GACAAAAGATGATGATTTTTAGATGCCAGTAAGAACAGCTCTGGCATGAAAGCAAACTAAATGATAGAACAAGTTGTGA
GACGAGCAAAAGTCAAAACAGCCGGCCTATGCTGTCACCCTTCCCAATTCCCATCCACCATTCCTAATACCCACCCACCG
GTGTAAACAAGGCCTGATGATTTTACTACTGCCCTCCAGTTTTGATTGTGCTACTAC-----------CTGCCCTGTTCA
CGTCACCGGTGCGGCCACGGCGAGCGCCACCGCCAGCCTTCCGGTTGATCCCGGACGCAACGCAGCCTCAGCAGTCCCCC
TCCAGCTCTGATGATCTCTACCAACACTGACTAGTAACCTCAGTGCCAGAGAGACCTGTGGCAGATGCGCTCGCCATGGG
CAAGAAAGCCGGTGACGCTGAGCAGGCTGGACGCCTCCCTGAGACGTCAACCAGCAACGGCGCCGCGGTTCGTCGATGCA
CCGCTCAAGTGGGCGCGGCTCTCAGCGCTAAGTGCGTCGTCGCGTTGATCCTCGGTGCCGTCGTCTTCCTCTCGGCCTTC
TTCATGCTCCTTCAATTCCGATCACCGGGGAACAGCGTGCCTGATGCCCCCGGCACACTCATCGGTAAGGACGGCTTCTT
TAGCACCAGGTTTCAGCCATGATCAGCTATCTCCAGCCATGTGTGCCTTCCAAAGCTCCATGTCTTCGATAGGAACTATG
CCATGAATCTAGATA----GTAAAATACGAAAACCTCCTTCTCAGTAATAAACCATAGTCAACAATCAGCTACAGCAGTC
AGCAGTTACCATGTTTTGACGACAAAACATTCACTTCTCCAGATGAAATTCAGGCTGGTTTCATCTTGTTGAAGCCACTT
GCGCAACTCGCTCCACATGCCGCGGAGCTACAACAAGAGATAAACCGTCAAATTGGAGTCCCCAACACTACGGTATGCTA
CCACTACCAGCCCCAATTCAAGCCACTCGAGAAGACATGCTGAATACTGACCGAGACAATTCTGCAGGTTTCCGTCTCTA
TGCAGGCATTATTCTTGAGCTTCACTGTTGTAGAATTTGATGTTCTTCCTGACCCAATAAACACCTCCATAAGTGCGCGA
TCCATGCACGCATTGAGGAAAAACTTGATCCAGCTTACACTTCAGCAGCTGAATTTATCGCTGACACCATCGGTCTTCGG
ATATCCATTGTGCGTACAGATGCTGGGGTTCCCAGGAGGGATCACAATAGAATTAGAACCCCTACAGGATGATTCCATTC
TACAAGTTGCACAGCCTATTTTCAATGTCACGCTTGACATGAGCATTCGCCAATTGAGGGGACTGATTGAGGAAATGAAG
GAGGATCTTGGGCATTTACTGGATGAGGTACCATATGAGCTCCCCCCCTTTCTACATCTCATATGGG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TTTT
TTCTTCTTCTGATTAACATCTTTCCTAGAAGATCTTGACATAAAGTGACAACATGCTATCTACATGCAGGACATATACAT
AGATCTGACAAATAAGAATGGCTCAACGATTGCCCCACCAGTTATAGTCCAAGTTTCCCTCTCCCCAGATGACCGC---G
GCGTTTATGAAGAAATGGGGAGGCTGAAACAGCTGGCTGAAATCATCACAGAATCAAGTTCAATGAACCTTGGCCTAGAC
CCATCGGTTTTTGGTAGAATCAAGGATCTCAAGTTGGCTCCGCGTCTGCAAGCCCTCGTTCCATCATTTGCTCCTAGCTC
ATCTCCAACGCAAATGTCATTCACTTCCATGCCTCCATATTCACAGCCAATGCCATCCCCTTCCATGCCTCCATATTCAC
AGCCAAGTAGAACCAATCTTTGTGCACATTGTTCATGCCCTGCTTGGATGAAACTAAATGCAACCAATCCACATCGCGTG
TTAATGCAACTTCCTCCAATGACAATCTCTCTTCAATTACCAACACAGCGTCATAGCGGGAATGGACCTGGGCACAAGCA
AAGTGGCAATGCAATGGCCGCACCAACCTCCATTGCGCCATCATCCCAACCGTAGTAATAAGGTAAAAATAATATGCTTT
TGGATTCATCGATGCAGTTATTAAATCGTTTGATATATTTAGAAGAATAATATGTATCTGATAATAATAAAATGATTG--
GAATACGCCAATGC-GTTCATCTCTTACTTTAACACTGTTAGTTATAA-------AATAAAGAATGCATTTACCTAACCT
TTTAAAACATTTTTAAAAAGAGGCTGCATGATATGAACAAAGGAATTTGG------------------------------
---------------------ATACATTCATGAAGGTATACTGGTCTGATTTTTTTTTTTGTATGTTGAATTTTCTTCAG
GTACTTGTACAGTCGAGCAAGATTCAAGTTCCAATTGGAATTCTACAAAAGCAGGCCTCTCAGCCTCAGGCAGATCAGAA
TTTGCATGTTAAGACTATTTTGCAGCTTATATTACAGTGCAACACTTCGATAACATATCGCGAGTTGCACCAAGGTTGGG
AATTTGGGATGTAGCAACTCTATGCTTAAACTAACGTCCTATTTTGTAAGAAATCTAGGCCAAGTTTAATTACAGACCTA
TACTCACATGAAACCCGGACAAATCCCAAGGTCCATGTATAGTAGAATTAGCAAGTTACAGCTACAAAAGTGGCTAGCCA
CCATATGTTCCTAAAGACATGTTCTTGGTTGTTTATCTGTTCAGATAACCATTTTTTCCCCAGGCAGGTCATGCATTTGC
ATACGCCAGACATTGCTCTTATCTCCAAGAGCCCCTTGGATATTGATTTACTGGCCTGAATCTTGCTTATGAGTCAGATG
TTCTGTAAATGCTCCTTGCATAAAGTTTTTCACTTGTTAACAAGAGAAAACTCAGTATTGTAAGTTTTGCAACTGTATGT
CTAAGATGT-------------------------------------------------------CACACAC---------
---------------ACAGAAAAAAACATATTATATCTTTCTCGTGTTTTGGATGTTTCTCTCTATGAAATCGATATTAT
GAAGACACGCGTAAACCAAACTAAATGTACAAAAAA-AAGTTAAGCAATTGAAAATCATGGTTTACAACTTACAAC
>chr6A_1
TAAGCACTCGTGTAAAGAAATCAGATTGCTGGCTTTGTAAGCACCGGCCAAATACGAGTAAGCATTTTAAATACTGTTAT
TATCTTATTATTCACATGAAGTCATCCTGTACGTTTATGGTAATCTTGCTCTATTTTCTATCTTTGTTTGTTTCATTCTG
CTTGCTTTTTTCCAACTAACCTTGCTTTCCGACTCCACAGGCGAAGATAAGAATGCGAGCAAAGTGAACGCATGAAAGGG
ATGGCAAAACCCCCTCAAGATCGAAAGAGTTTCCATTAAAAAAAATCATAAGATCCAAAAAAGGGTTCCACTATCAAGGG
ACAACGGACCAAACAACAAAACAGAGCGTCCAAATGTGCAGAACATAATAAGCTAAACTAAAATTCAAAAGGTAAAAGTT
CTAGCAAACCAAGTTTTTTGGTACAACGCTGCCTCATCTAACCTAGCATAGCAGCACGAAACTAAAGTTTTCCGTTTCTT
TCTGCATTAACTATGTGGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
AGACAAGAGATGATGATTTTTAGATGCCAGTAAGAACAGCTCTGGCATGAAAGCAAACTAAATGATAGAAGAAGTTGTGA
AACGAGCAAAAGTCAAAACAGCCGGCCTATGCTGCCCCCCTTCCCAATTCCCATCCACCGTTCCTAATGCCCACCCGCCG
GTGTAAACAAGGCCTGATGATTTTACTAGTGCCCTCCAGTTTTGATTGTGCTACTAC-----------CTGCCCTGTTCA
CGTCACCGGTGCGGCCACGGCGAGCACCAGCGCCAGCCTTCCGGTTGATCCCGGACGCAACGCAGCCTCAGCAGTCCCCC
TCCAGCTCTGATGATCTCTACCTACACTGAGTGGTAGCCTCGGAGCCAGAGAGACCTGTGGCAGATGCGCTCGCCATGGG
CAAGAAAGCCGGTGATGCTGAGCAGGCTGGACGCCTCCCTGAGACGTCAACCAGCAACGGCGCCGCGGTTCGTCGATGCA
CCGCTCAAGTGGGCGCGGCTCTCAGCGCTAAGTGTGTCGTCGCGTTGGTCCTCGGTGTCGTCGTCTTCCTCTCGGCCTTC
TTCATGCTCCTTCAATTCCGATCACCGGGGAACAGCGTGCCTGATGCCCCCGGCACACTCATCGGTAAGGACGGCTTCTT
CAGCACCAGGTTTCAGCCATGATCAGCTATCTCCAGCCATGCGTACCTTCCAAAGCTCCATGTCTTCGATAGGAACTATG
CCATGAATCTAAATATACAGTAAAATACTAGAACCCCCTTC--AGTAATCAACCATAGTCAACAATCTGCTACAGCAGTC
AGCAGTTCCCATGTTTTGACGACAAAACATTCACTTCTCCAGATGAAATTCAGGCTGGTTTCATCTTGTTGAAGCCACTT
GCGCAACTCACTCCACATGCCGCCGAGCTACAACAAGAGATAAACCGTCAAATTGGAGTCCCCAACACTACGGTATGCTA
CCACTACCAACCCCAATTCAAGCCACTCGAGAAGATTTACTGAATACTGACCGAGACAATTCTGCAGGTTTCCGTCTCTA
TGCAGGCATTATTCCTGAGTTTCACTGCTGTAGAATTTGATGTTCTTCCTGACCCAATAAACACCTCCATAAGTGCACGA
TCCATGCACGCATTGAGGAAAAACTTGATCCAGCTTACACTTCAGCAGGTGAATTTATCGCTGACACCATCGGTCTTCGG
ATATCCATTGTGCGTACAGATGATGGGGTTCCCAGGAGGGATCACAATAGAATTAGAACCCCTACAGGATGATTCCATTC
TACAAGTTGCACAGCCTATTTTCAATGTAACGCTTGACATGAGCATTCGCCAGTTGAGGGGACTGATTGAGGAAATGAAG
GAGGATCTTGGGCATTTACTGGATGAGGTACCATATGAGCT-CCCCCCTTTCTATATCTCATATGGTT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TTTTC
TTCTTCTTCTGATTAACATCTTTCCTAGAAGATCTTGACATAAAGTGACAACATGCTACCTACATGCAGGACATATACAT
AGATCTGACAAATAAGAATGGCTCAACGATTGCCCCACCAGTTATAGTCCAAGTTTCCCTCTCCCCAGATGA---C---G
GCGTTTACGAAGAAATGGGGAGGCTGAAACAGCTAGCTGAAATCATCACAGAATCAAGTTCAATGAACCTTGGCCTAGAC
CCATCGTTTTTTGGTAGAATCAAGGATCTCAAGTTGGCTCCGCGTCTGCAAGCCCTCGTTCCGTCATTTGCTCCTAGCTC
ATCTCCAACGCAAATGTCATCCACTTCCATGCCTCCGTATTCACAGCCAATGTCATCCCCTTCCATGCCTCCATATTCAC
AGCCAAGTAGAACCAATCTTTGTGCACATTGTTCATGCCCTGCTTGGATGAAACTAAATGCAACCAATTCACGTCGCATG
TTAATGCGACTTCCTCCAATGACAATCTCTCTTCAATTACCAACACAGCGTCATAGCGGGAATGGACCTGGGCACAAGCA
AAGTGGCAATGCAGTGGCAGCACCAACCTCCATTGCACCATCATCCCAACCATAGTAA---GGTAAAAATAAATTGTGTA
TGGGTTTACCAATGTAGTCATTAAATCATTTGATATATTTGG--GACTAATATGTATCTTGCTAATAATAATATACTATA
GAATACGCCACTGCAGTTCATCTCTTACCTTACCGCTGTTAGTTATAATAAAAAGAATAAACAACGCCTTTACCTAACCT
TTTAAAAAAA--TTAAAAAGAAAATGCATGATATAAACAAAGATGGTTTGAATTTTGTTTCCATGTTGAATTTTCTCCAG
GTACTTGTACGGTCATGATATATACACTCATGAAGGTATACTGGTCTGAATTTTGTTTT--TATGTTGAATTTTCTCCAG
GTACTTGTGCAGTCGAGCAAGATTCAAGTTCCAATTTGAATTCAACAAAAGCAGGCCTCCCAGCCTCGGGCAGATCAGAA
TTTGCATGTTAAGACTACTTTGCAGCTTATATTACAGTGCAACACTTCGATAACATATCGCGAGTTGCACCAAGGTTGGG
AATTTGGGATGTAGCAACTCTATGCTTAAACTAACGTCCTATTTTGTAAGAAATCTAGGCCAAGTTTAATTATAAACTTA
TACTCACATGAAATCTGGATAAATCCCAGGGTCCATGTATAGTAGAATTAGCAGGTTACAGCTACAAAAGTGGCTGCCCA
CCATATGTTCCTAAAGACATGTTCTTAGTTGTTTATCTGTTCAG-TAACCATTTTTTCCCCAGGCAGCTCATGCATTTGC
ATACACCAGACATTGCTCTTATCTCCAAGAGCCCCTTGGATATTGATTTACTAGCCTGAATCTTGCTTATGAGTCGGATG
TTCTGTAAATGCTCCTTGCATAAAGTTTTTCACTTGTTAACAAGAGAAAACCAACAATTGTAAGTTTTGCAACTGTATTT
TCTTGTGGCATGGCTGACTATCAGCTAAACATGTAT-------------ACCCGCCCCCCGACACACACAC---------
---------------AGAGAAAATAACATTTTAGATCTTTCTCGTGTTTTGGATGTTTCTCTGTATGAATTCGATATTGA
GAAGACATGCGTAAACCAAACTAAATGTATAAAAAATAAGTTAAGCAATTGAAAATCATGGTTTACAACTTACAAC
>chr6B_212
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GAGCAAAGTGAAAGC--GAAAGAG
ATGGCAAAACCCCTTCAAGATCGAAAGAGTTTCCATTTTCTTTTT-CGTAAGATCCAAAAATGGGTTCCACTATCAAGGG
ATAACGGATCAAACAACAAAACAGAGCATCCAAATGTGCCGAACATAAGTG---AAACTAAAATTCAAAAGGTAAAAGTT
CTAGCAAACCAAAGCTTTTGCTAGAAGACTGCCTCGTCTAAGCTAGCA-----GCATCCGATAAAAGTTTTCCATCTCTT
TCTTCATTAACTA-----CTCCCTCCGTTCCTAAATACTCCA-TATGTATATATTTCAATATGAACTACGTACGAATGTA
CATAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCCGTATGCAGTCCATATTAGTGTCTCTAAAAAGACTTGTAC
TCCATCCGTCCCAAAATTCTTGTCTTAGATTTGTCTACATATGTATGTATCTAGTCACATCTTAGTGTTAGATACATTCG
TATCTAGATAAATTTAAGACAAGATTTTTTGGAACGGAGGGAGTATTTAGGAACGGAGTAAGTAGGAGTATATGGCAAAA
AGACAAACGATGATGATTTTTAGATGCCAGTAAGAACAGCTCTGGCATGAAAGCAAACTAAATGATAGAAGAAGTTGTGA
GACGAGCAAAAGTCAAAACAGCCGGCCTATGCTGTCACCCTTCCCC--------------------ATTCCCACCCACCG
GTGTTCACAAGGCCTGATGGTTTTACTACTGCCCCCCAGTTTTGATTGTACTAGTAGTCTGGTTAGTACTGCCCTGTTCA
CGTCACCGGTGCGGCCACGGCGAGCACCACCGCCAGCCTTCCGGTTGATCCCGGACGCAACGCAGCCTCAGCAGTCCCCC
TCCATTCCTGATGGTCTCTACCTAGACTGACTAGTAACCTCGGAGCCAGAGAGACCTGTGGCAGATGCGCTCGCCATGGG
CAAGAAAGCTGGTGACGCTGAGCAGGCTGGACGCCTCCCTGAGACGCCAACCAGCAACGGTTCCGCGCTTCGCCGATGGA
CCGCTCAAGTGAGCGCAGCTCTCAGTGCCAAGTGCGTCGTCGCGTTGGTCCTCGGTGTCGTCGTCTTCCTCTCGGCCTTC
TTCATGGTCCTTCAATTCCGATCACCGGGGAACAGCATGCCTGATGCCCCCGGCACACTCATTGGTAAGGACGGCTTCTT
CAGCACCAGGTTTCAGCCATGATCAGCTATCTCCAGCCATGCGTGCCTTCCAAAGCTCCATGTCTTCGATAGGAACTATG
TCATGAATCTAGATA----GTAAAATACAAGAACATCCTTC--GGTAACCAACCATAGTCATCAATCTGCCACGGCAGTC
AGCAGTTCCCATGTTTT---GACAAAACTTTCACTTCTCCAGATGAAATTCAGGCTGGTTTCATCTTGTTGAAGCCACTT
GCGGAACTCACTCCACATGTCGCCGAGCTACAACAAGAGATAAACCGTCAAATTGGAGTCCCCAACACTACGGTATGCTA
CCACTACCAACCCCAATTCAAGCCACTCGAGAAGATTTACTGAATACTGACCGAGA---TTCTGCAGGTTTCCGTCTCTA
TGCAGGCATTATTCCTGAGTTTCACTGTTGTAGAATTTGATGTTCTTCCTGACCCAATAAACACCTCCATAAGTGCACGA
TCCATGCACGCATTGAGGAAAAACTTGATCCAGCTTACCCTTCAGCAGCTGAATTTGTCGCTGACACCATCGGTCTTCGG
ATATCCATTGTGCGTACAGATGCTGGGGTTCCCAGGAGGGATCACAATAGAATTAGAACCCCTACAGGATAATTCCATTC
TACAAGTTGCACAGCCTCTTTTCAATGTAACGCTTGACATGAGCATTCGCCAATTGAGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTTTT
TTCTTCTTCTGATTAACATCTTTCCTAGAAGATCTTGACATAAAGTGACAACATGCTATCTACATGCAGGACATATACAT
AGATCTGACAAATAAGAATGGCTCAACGATTGCCCCACCAGTTATAGTCCAAGTTTCCCTCTCCCCAGATGA---CCGCG
GCGTTTACGAAGAAATGGGGAGGCTGAAACAGCTAGCTGAAATCATCACAGAATCAAGTTCAATGAACCTTGGCCTAGAC
CCATCGGTTTTTGGTAGAATCAAGGATCTCAAGCTGGTTCCGCGACTGCAAGCCCTCGTTCCATCATTTGCTCCTAGCTC
ATCTCCAACGCAAATATCATCCCCTTCCATGCCTCCATATTCACAGCCAATGTCATCCCCTTCCATGCCTCCATATTCAC
AGCCAAGTAGAACCAGTCTTTGTGCACATTGTTCATGCCCTGCTTGGATGAAACTAAATGCAACCAATTCGCATCGCATG
TTAATGCGACTTCTTCCAATGACAATCTCT-TTCAATTACCAACACAGCGTCATAGCAGGAATGGACCTGGGCACAAGCA
A--TGGCAATGCAGTGGCAGCACCAACCTCCATTGCGCCATCATCCCAACCATAGTAA---GGTAAAAATAAAT------
----------------------------------ATATTTGG--GACTAATATATATCTTGCTAATAATAATATACTATA
GAATACAGCACTGCAGTTCATCTCTTACCTTACCGCTGTTAGTTATAATAAAAAGAATAAACAATGCCTTTACCTAACCT
TTTAAAATATTTTTTAAAAGAAAATGCATGATATAAACAAAGATGGTCTGAATTTTGTTTCTATGTTGAATTTTCTCCAG
GTACTTGTACAGTCATGATATATACACTCATGAAGGTATACTGGTCTGAATTTTGTTTC--TATGTTGAATTTTCTCCAG
GTACTTGTACAGTCGAGCATGATTCAAGTTCCAATTGGAATTCTACAAAAGCAGGCCTCTCAGCCTCGGGCAGATCAGAA
TTTGCATGTTAAGACTATTTTGCAGCTTATATTACAGTGCAACACTTTGATAACATATCGCGAGTTGCACCAAGGTTGGG
AATTTGGGATGTAGCAACTCTATGCTTAAACTAACGTCCTATTTTGTAAGAAATCTAGGCCAGGTTTAATTATAAACTTA
TACTCACATGAAATCTGGATAAATCCCAAGGTCCATGTATAGTAGAATTAGCAGGTTACAGCTACAAAAGTGGCTGGCCA
CCATATGTTCCTAAAGACATGTTCTTAGTTGTTTATCTGTTCAG-TAACAATTTTTTCCCCAGGCAGCTCATGCATTTGC
ATACGCTAGGCATTGCTCTTATCTCCAAGAGCCCCTTGGATATTGATTTACTGGCCTGAATCTTGCTTATGAGTTGGATG
TTCTGTAAATGCTCCTTGCATAAAGTTTTTCACTTGTTAACAAGAGAAAACCAAGAATTGTAAGTTTTGCAATTGTATTT
TCTTGTGGCATGGCTGACTATCAGCTAAACGTGTATAACACCACCCCCCACCCCCACCCCGACACACACACACACACACA
CACACACACAGAGAGAGAGAAAATAACATTTTAGATCTTTCTCGTGTTTTGTATGTTTCTCTGTATGAATTCG-TATTGA
GAAGACATGCGTAAACCAAACTAAATGTACAAAAAATAAGTTAAGCAATTGAAAATCATGGTTTACAACTTACAAC
>SNPs
--------------------------S----------------S--------------S-----------------S---
--------S----------S----S-S-----------S-----------------------------------------
------------S----S------------------------S------------------------S-S----------
--------S------------------------------S-----S----------------------------------
----------------------S-------------S------------S------------------------------
-----------------------------------------------------------------S--------------
--S----------SSSSS-----------------------SS------S-S-----------------S---SS-----
-------S------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-SSSSSSSSSS-SSS----------
----------------------------------------------------------------------S---------
-----------------------------------------------------------S--------S-----------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
----------------------S------------------S-S------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S---------S----------------------
--------------------------------------------------------------------------------
S----------------------------------------S--------------------------------------
----------------------------S-S----------SS------S-----------------S------------
-------S------------------------------------------------------------------------
---------S-------------S--------------------------------------------------------
---------S-------------------------SS-S-----------------------------------------
--------------S----S--------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
-----------------------------------------S------------S-----------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------SSS-----
-------S--------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------------------------S---------------------------
--------------------------------------------------------------------S--------S--
-------S------------------------------------------------------------------------
-------------S----S--------------------------------S------SSS-----------SS--SS-S
---S--S-S-S---S---S--------S------------S-SS--S------------SSSS-SS-SS--SSS-S-S--
----------S-----------------S---S-S--------------------------S-----S------------
-------S-------------SSS----------S-------SSSS--S-------------------------------
--------------------------S----------------------S----S----SS---------------S---
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-S--S--
-------------S-S---S---------------------------------S---------------------S----
--------------------------S-----------------S----------------------S------------
---------------------------------------------------------------------------S----
---------------------------------------------------SS--S----------------------S-
SSSS-SS-S-----------------------------------------------------------------------
----------------S------S-----S---S----------------------------S------S--------SS
-------S--------------------------------------------------------------------
>forward_940
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CTTCCCAATTCCCATCCACCA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2713
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CCGCGGCG
TTTATGAAGAAA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_1441
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TCGGTAAGGACGGCTTCTT
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_3774
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------CCCGGACAAATCCCAAGGTC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
