>input_sequence_46328
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------ATGGGTCACTCGCCGATCGCCGCCGG
CGCCGGACGCGACCGCCTGAGCGACCTCGGTGACGACGTGGTCGGCCACATCCTCTCCTTCCTCGACGCCAAGGAGGCCG
CGCGCGCCGCGGCGCTCTCGTCGCGGTGGCGCGACGTCTACGCCAGCGTCCACACCGTCTCCCTGGAGCTGCCGGAACGG
CCACTCCACGACGACCTCACCGATCTCACGTACATCCTCAGAATTTT---------GCGGCCCTTCGTCGCCGGCGTCAC
CGCCGCCCTCTTCGCCCGCGACCGCCGCGCGGCCCCTGGCGCGGCGGCGGTGCCTCTGCGCACGCTCCGCGTCTGTATGG
AAGGCAG------CGTAGACTACTCCACGGTGGGCTTATGGGTCACCCACGCGCTGAGGCATGGCGCCCCTGGCCTCGAG
CTCGACCTCCGCCTCGGCCGCGACCCCGTCTGCTGGGGCGTCGACCACAAACCCGTCCACCGCTCCCGACC---------
TGCCGTTTACCCACATCAGAAATA---------------------TAACTTTGACCCCGTCGATCCTTCCCTCCCCGCGG
ATGCC----------------------------------------------------------AACGAGGACGACGATGC
CGCCTCTAGC----------------------------------------------------------------------
--------------------------------------------------GATGACGAGATGCCTTCTGGATTTGCTAAT
CGGCTGTACATCCG------------------GGAACTCCCGAGGCCGCTATTCTCCTGCGCGACGCTGCGAACGCTCCG
CCTCGGGTCCTTCTGCCTCTCCACGCCGGAGGCCGTGAGCCTTCCGTCGCTGGAGGTGCTCCGCCTCACCAACGTGCGCG
AGGAGGAGGAGCACGTGCAGAGGCTCATCTCCGCCTGCCCGCTGCTCGCGGACCTGATGGTCGAGGCCTGCGGCACGGTG
ACCGCGCTCCGCCTTGTCGACAACACGCATCTCCGCAGGCTCGCCATCCGGTTGTGCGACAACCTGGCCACTGTAGACAT
GGACGCATCACAGCTCCTATGCTTCGAGTATCTCGGCGCCATCCCTGATAACTCGTTCCTCGCCGTAGGCAGT------G
GCGTCGCCTTTCCAGCCATCACGCCGTGCAAGATCGACACCTACGCTGCCCGTCCTGAGGAGGC---------GGAGGAC
CTCGTCAAGATCACTTCGTTCCTGCAGTTGTTCGTCG---CCACAAAACATCTCCACTTGTGCTCCACACCGATGGGCTC
CTGTTTCGTGAACCTCCCCGAGTTCCCGAGCCTCAGCCACCTCGAGCTGAATGGATGCATACTGCAAGGCGACGATCCCG
CCTTTGCCATTGCCGTGACGAGCACGATCCTCAATCAGGCCCCTAACCTGGAGCTACTGACCCTGGTATTCCAAGCAGCT
GCGCCTCAAGATCAAGAGTCGCAGCAGCGCAACGGCCCCTACCGTGGCCGCATCGAGGGGGAGCTCGTCGACACGCACCT
TCTCCACTACGACAAGTACGACACCATTGACTATGC---GCTGATGGTTAACACGCCGGTCCCGCCCTGCCTCGTGAACC
GAGTGAGCAAGATTGAGTTGGTGCATTACCAAGGCGGCAAAGCGCAGAGGACGCTGGCCAAGTTCTTGCTCGGCAACGCT
CCTGCGCTCAAGATGCTCTATTGTGGATTTGCGGAGGGGCCGGAGTGGCTTCAGATGCAATTGATGCGTGAGATTGAAGG
CTGGGTGATCAATGAGACAGCTAGCAAGGAGTTCCGTTGA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr3B_1_TraesCS3B01G495000
GAATGGAGGCGAGGGTGTGACCCCTGTTTATCGGGAAAAAGGGAGTTCTTACGGATCAAACAATAGAAGGGAGAAAAAAA
CCGAGTTCGAAGCACAAATGGGTAACCCATTGCTAGATGCCTGCACTCAAAACATCTACTAGTAACACCTACTACAGGGC
AGGAAGTATGTGTACGTTTCAAATCCACTCACATTGCAAACGAACATCCATGGATTTTTCGTGTGCAAAATATTGTGTTG
TACTCTTATGTTCGCAATTGGATTCCATCCTTTTATGCATGCAATCAACCTTTTTTAGAACTTTGACCACCAATATAGAT
AAGTATAATTAGATTTGTCGCCTGAAAATGATAGCATATTGTTTACTAAATTGTTCTTCAAAAGTATTTGCACAAAATTA
CAGTTTCCCTTACAAAATCTTTAGACTCGGCTAAAATTTTGACGTCAGA-TTTTTTACCATGGCAAATTGAATGTTTTTA
ATGACTATTTGTGTTGGCAAGCATGGCAAATTCAGCTCAGTTCATTTCTTTTGCTAGAAAAATGACGTGCTCGTCAATTA
AATTTGTCATCCTCACGCTAACTAAATTTGCCATAAAAAATCATTCGATTTGCCATGGCTACAAATCTGACATCGGATTT
TG--CATTAGCGAAATCTTTTGGCTGGAGGTTTGAGGATGGAT-------------TATCACAACCTCTTTTATCTTGTC
TATAAAAAGGAGAAGCTATACGGGACTGTAATTAACATGACAAGATCATACTACTAAATCAGAATAAAATTCAGTCGCAC
ATTTTTGGAGTTCGACTTCTACATGG--CATTGAGTTTCAGA-GATGCGTTCCTGCAAAAACAGAATAAAATCAGAGATT
GAC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTG
GAAAAGAATTATTCTTTTGAAAGGAAAAAAGAACTGATTATTGGTACTGCGTGTTTGGAAAGACAACGTCGGTTGTTATA
TTCCCTGCACATAACGCGGGGACAGCTCCGCATCCGCAGATCGCCGCCGC-GCGATGGGTCACTCGCCGATCGCCGCCGG
CGCCGGACGCGACCGCCTGAGCGACCTCGGTGACGACGTGGTCGGCCACATCCTCTCCTTCCTCGACGCCAAGGAGGCCG
CGCGCGCCGCGGCGCTCTCGTCGCGGTGGCGCGACGTCTACGCCAGCGTCCACACCGTCTCCCTGGAGCTGCCGGAACGG
CCACTCCACGACGACCTCACCGATCTCACGTACATCCTCAGAATTTT---------GCGGCCCTTCGTCGCCGGCGTCAC
CGCCGCCCTCTTCGCCCGCGACCGCCGCGCGGCCCCTGGCGCGGCGGCGGTGCCTCTGCGCACGCTCCGCGTCTGTATGG
AAGGCAG------CGTAGACTACTCCACGGTGGGCTTATGGGTCACCCACGCGCTGAGGCATGGCGCCCCTGGCCTCGAG
CTCGACCTCCGCCTCGGCCGCGACCCCGTCTGCTGGGGCGTCGACCACAAACCCGTCCACCGCTCCCGACC---------
TGCCGTTTACCCACATCAGAAATA---------------------TAACTTTGACCCCGTCGATCCTTCCCTCCCCGCGG
ATGCC----------------------------------------------------------AACGAGGACGACGATGC
CGCCTCTAGC----------------------------------------------------------------------
--------------------------------------------------GATGACGAGATGCCTTCTGGATTTGCTAAT
CGGCTGTACATCCG------------------GGAACTCCCGAGGCCGCTATTCTCCTGCGCGACGCTGCGAACGCTCCG
CCTCGGGTCCTTCTGCCTCTCCACGCCGGAGGCCGTGAGCCTTCCGTCGCTGGAGGTGCTCCGCCTCACCAACGTGCGCG
AGGAGGAGGAGCACGTGCAGAGGCTCATCTCCGCCTGCCCGCTGCTCGCGGACCTGATGGTCGAGGCCTGCGGCACGGTG
ACCGCGCTCCGCCTTGTCGACAACACGCATCTCCGCAGGCTCGCCATCCGGTTGTGCGACAACCTGGCCACTGTAGACAT
GGACGCATCACAGCTCCTATGCTTCGAGTATCTCGGCGCCATCCCTGATAACTCGTTCCTCGCCGTAGGCAGT------G
GCGTCGCCTTTCCAGCCATCACGCCGTGCAAGATCGACACCTACGCTGCCCGTCCTGAGGAGGC---------GGAGGAC
CTCGTCAAGATCACTTCGTTCCTGCAGTTGTTCGTCG---CCACAAAACATCTCCACTTGTGCTCCACACCGATGGGCTC
CTGTTTCGTGAACCTCCCCGAGTTCCCGAGCCTCAGCCACCTCGAGCTGAATGGATGCATACTGCAAGGCGACGATCCCG
CCTTTGCCATTGCCGTGACGAGCACGATCCTCAATCAGGCCCCTAACCTGGAGCTACTGACCCTGGTATTCCAAGCAGCT
GCGCCTCAAGATCAAGAGTCGCAGCAGCGCAACGGCCCCTACCGTGGCCGCATCGAGGGGGAGCTCGTCGACACGCACCT
TCTCCACTACGACAAGTACGACACCATTGACTATGC---GCTGATGGTTAACACGCCGGTCCCGCCCTGCCTCGTGAACC
GAGTGAGCAAGATTGAGTTGGTGCATTACCAAGGCGGCAAAGCGCAGAGGACGCTGGCCAAGTTCTTGCTCGGCAACGCT
CCTGCGCTCAAGATGCTCTATTGTGGATTTGCGGAGGGGCCGGAGTGGCTTCAGATGCAATTGATGCGTGAGATTGAAGG
CTGGGTGATCAATGAGACAGCTAGCAAGGAGTTCCGTTGATGGATGCTTGCTTGGTATATATGTTTGCAACTGCAATACA
AATTCCAGTGATACTAGTATAGTGTC-------------------AAAACATTGCCTTCTTGTTTC--------------
--------------TTAATAACTGTACAGAGTATCAGTGCGAAAGCTCCTCATACAATATGTGACAGATAATCTTTAAGT
TCTTGCATCCATATTTCAAAGACCTGCAGGATTATTTTCTTTGGTTTGTAATTTGTGCAAACATAAGTAAAAGGTAGTAG
TGGTAAACAGGTAATAAAAAGGACGCCGATAACGCCCACACGTGTGGGCGTTAAAGGGTCTGTTTATACAGTTTGTGTGG
TGTTTAAGAGGATCAGCCCACACGCCTACGTATGGGCCAAACAAGTAATGCCCACACGTCTCTTTTTCTTTTTTTGCGGT
CCCTCTCACATGCCTGCGTGTGTAGGGCCGGCCCTAGAGTATGGCCAAGGGGGCGGCGGCCTAGGGCCCAGCCCTGCAGG
GGGGCCATGATCTAGTATCTATCTATGTGTATAGCCCAGTAAAATAGAGAAAAAAAAAGAAGAAAGTATAGTTTTTCCCC
TCAAATCCATCTAGGTGGATCAAATTCCCCCCAATGTCTAAAACCGGTTAAATCACCCCCCAATCTCTGCAATACCAGAT
CAATAAGCCCCTCGAGTGTTTTTGGGAAGGATTGCAACCGGTTTTGACTATAGGTTGTTGACTTATCATTTAACTTGTGC
CCCACGACGCAATGTTCTTGACGGGCGAGCTTCGCGCCGGGCAACCGGGCAAGTACTGGCTCTGACCATTCATCCAGGCT
GAGGTTGTTGGCTTTGGCGCCGCAGAGATTGTAGTCGAGCGCGCGGTCGCCAGGGCTCAGGAGGTGCCCAAGGTGCGTCC
TTACGATGATGATGGTGTCGCTCCTGCCCAGCTTCGACGGGCGCCTCGAGCTGCCTCGCCGCATCCGCCATGTGCACCGG
CGGGAGGGAGGCGATGAGGGCCACGAGGCCGGAGGGCGCGGGGCCGC
>chr3D_1
GAATGGAGGCGAGGGTGTAACCCCTGTTTATCGGGAAAAAAAGGAGTTCTATGGATCAAACAATAGAAGGGAGAAAAAAA
CGAGTTCC--AGCACGAATGGGTAACCCATTGCTAGATGCCTGCTCCCAA-------------AACACCTACTACAGGGC
AAGAAGTATGTGTAAGTTTCAAATCCACTCACATTGCAAACGAACATTGATGGAATTTTTGTGTGTAAAATATTGTGTTG
TACTCTTATGTTCGCAACTGGATTCCATCCTTTTATGCATGCAATCAACCTTTTTAAAAACTTTGACCACCAATATACAT
AAGTATTATTAGATTCGTCGCCTGAAAATGATAGCATATTATTTACTAAATTGTTCCTCAAAAGTGTCTCCACAAAATTA
CAGTTTCCCTTGCAAAATCTTTGAACTCGACTAAAAATATGACGTCAGATTTTTTTACCATGGCAAATCAAATGTTTTTA
-TGACAATTTGTGTTGGCAAGCATGGCAAATTCAGCTCAGTTCATTTTTTTTGCTAGAAAAATAACTGCTA----AACTA
AATTTGTCATCCTCACGCAAACTAAACCATAAAAATG------TTCGATCTGTCATGCCTAAACATTTGATGTCAGATTT
TAAACATTATCGAAATCTTTTGGCTGGAGGTTGAAGGATGGATTTATTTGGTATCGTATCACAACCTCTTTTATCTTGTC
TATAAAAAGGATAAGCTATACGGGACTTAATTAGCATCGT-AAGATCATACTCCTAAATCAGAATAAAATTCAGTTAGAC
A-TTTTTTAGTTCAATTTCTACATGGAGCAATTGATTTGGGAAAGGGAAACTATATAGATCACCCGGCAGATCACAGCCC
CGCATTCGTCACCTTGTCTGCACGCCACGTGACCCATAGCCACAACCACCAGTTTTTACAACTGGCCCGTTGTTGCAATC
TCTCTCATCGCAACAACGGATCTGTTGTAGGATCTAGATCTTGAGAGAAGTCGTCGCTCGTGCTCCGCCCGAGCTCCCGT
CGAGTCGCGGCCTCCCCACGCTGCTCCGACTGCCTCGAGCTCCCGTCGAGTCGCCGACTCCTCTCTCTGCTCCGACAGCC
CCGAGCTCCCGTCGAGTCGCCGCCTGCCCGCGCTACTCTGACTGCCACGAGCTCCCCTTGAGTCGCGTATCTCCCCGTGA
CACGACCTGGTCGAAGGTTCGATGCTCGCGGCAGTGCCATGGCGGGGATGGGTGGCGCCGCTCCTCCGCAGCCACCGTCC
AATGGGCTCGTGGCGAACTATGGCGGTGTTTTGCTTTGCAACATCCAATCTGTTGCAAGAAATATTTCTTCAACATCAAT
ATGCTAAAAAAAATCCACAAAAGAATATCTGTTACAAATGTTTCCGTAACAAGAGCTTTGTTACAAAAAAGAGCAATTAG
TTTAGCCGCTTGATTTTCTCACATCTGACCGCCCGCGAGGGGCCGGATCTTTGCCTGCCGACGCGTAGAAGCCCCCTTTG
AAAAAAACTTTTTCTTTTGAAAGGAAAAAAGAC-----TATTAGTATTACGTGTTTGAAAAGACAACGTCGGTTATTATA
TTCCCTACGCATAACGCGGGGACAGCTCCGCATCCGCAGATCGCCGCCGC-GCGATGGGTCACTCGCCGATCGCCGCGGG
CGCCGGACGCGACCATCTGAGCGACCTCGACGACGGCATGATCGGCCACATCCTCTCCTTCCTCGACGCCAAGGAGGCCG
CACGCGCCGCGGCGCTCTCGTCGCGATGGCGCGACGTCTTCGCCAGCGTCCACACCGTCTCCCTGGAGCAGCCGGAACGG
CCACTCTACGACTACGACGCCGACGGCGACGATAGCTGGCACAAGCAAAACATTGCGCGGCCCTTCGTCGCCACCGTCAC
CGACGCCCTCTTCGCCCGCAGTCGCCGCCCGGACCACGCCGCCGCGGCGGTGCCCCTGCGCGCGCTCCGCGTCTGTATGG
ATGGCGG------CGCAAGTTACTTCAAGGTGGCCCGGTGGATCTCGTACGCCCTAAGGTATGCCGGCCCCGACCTCGAG
CTCGACCTCCGCCTCGCCCGCGACCCCGTCTGCTGGGGCATCGACTTCGACCCGCGCGATTTCGGGCTCTTCCGGGAGGA
TGCCAATTTACCAGATGAGAATGATGCCGTGGCCCAGATGCCTCCTGACATCGACCCGGTCGATCCTATCCTCGCCGCCG
ATGCCTGCCGCTGCCGGCAGCCCAAACAAATATCACGCCCCCAGGGAGCAGCCTCCCGGTGTCAACGATGACGACGATGC
CGCCTCCAGC----------------------------------------------------------------------
--------------------------------------------------GATGACGAGATGCCA---------GGTAAT
CGGCTACCCCAGCCACCGAGGTACATCGTCCCGGAACTGCCGACGCTGCTATTCTCCTGTGTGGCACTGCGATCGCTCCG
CCTCGGCTACTGCATACTCTCCATGCTGGAGGTCATCAACCTGCCGTCGCTCCAGTCGCTCCACATTACTCGCGTCCGGA
ACAAGGAGGAGCACGTGCAGAGGCTCATCTCCGGCTGCCCGCTCCTCGCGGACCTGACGCTCGAGGCCTGCAGCAGCCTG
ACCGCACTCTGCCTTGTCGACAACACGCGTCTCCGCAGGCTCGCCCTCCGGTTGTGCGACAACCTGGCCAACGTAGCCAT
TGACGCGTCAGGGCTCCTCTCCTTTGAGTATCTCGGCGCCATCCCCGACAGCTCGTTCCTCACTATAAGCGGCGGCGGCG
GTGGCGGCTTTCCGGCCATCACGTCGTGCAAGATCGACACCTTCGTTGTCCTCCGTGAGGAGGT---------GGAG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr3D_793
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGTCCGACTTCTACATGACACATTGAGTTTCAGAAGATGCGTTCCTGCAAAAACAGAATAAAATCAGAGATT
GACCTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
AAAAGAACTTTTTCTTTTGAAAGGAAAAGA-----------------TACGTGTTTGGAAAGACCACGTCGGTTATTATA
TTCCCCGCGCATAACGCGGGGACAGCTCCGCATC-GCAGATCGCCGCCGCCGCGATGGGTCACTCGCCGATCGCCGCTGG
CGCCGGACGCGACCGCCTGAGCGACCTCGACGACGGCCTGATCGGCCACATCCTCTCCTTCCTCGACGCCAAGGAGGCCG
CGCGCGCCGCGGCGCTCTCGTCGCGGTGGCGCGACGTCTACGCCAGCGTCCACACCGTCTCCCTGGAGCTGCCGGAACGG
CCACTCCACGACGGCCTCACCGATCTCACGTACATCCTCAGAATTTT---------GCGGCCCTTCGTCGCCGGCGTCAC
CGCCGCCCTCTTCGCCCGCGACCGCCGCGCGGCCCCCGCCGCGGCGTCGGTGCCCCTGCGCGCGCTCCGCGTCTGTATGG
AAGGCAG------CGTAGACTACTCCACGGTGGGCTTGTGGGTCACCCACGCGCTGAGGCATGCCGCCCCCGGCCTCGAG
CTCGACCTCCGCCTCGGCCGTGACCCCGTCTGCTGGGGCATCGACCGGAAACGCGTCCACCG---CCGGCC---------
TGCCGTTTCCCCATATCGGAACCACGCCGTCGGCGGGACGCCTCTTAACTTGGACCCCGTCGATCCTTCCCTCCCCGCGG
ACGCC----------------------------------------------------------AACGATGAAGATGATGC
CGTCTCTAGC----------------------------------------------------------------------
--------------------------------------------------GATGACGAGATGCCTTCTGGATTTGGTAAT
CGGCTGTACATCGG------------------GGAACTCCCGAGGCCGCTATTCTCCTGCGCGGCGCTGCGATCGCTCCG
CCTCGGCTCCTGCTGTCTCTCCACGCCGGAGGCCGTGAGCCTGCCGTCGCTGGAGGTGCTCCGCCTTACCCACGTCCGCG
ATGAGGAGGAGCACGTGCAGAGGCTCATCTCGGCCTGCCCGCTGCTCGCGGACCTGATGGTCGAGGCCTGCGGCACGGTG
ACCGCGCTCTGCCTTCTCGACAACACGCGTCTCCGCAGGCTCGCCATACGGTTCTGCGACAACCTGGCCACTGTAGCCAT
CGGCGCATCACAGCTCCTATCCTTCGAGTATCTCGGCGCCATCCCTGATAACTCGTTCCTCGCCGGAGGCAGT------G
GCGGCGGCTTTCCAGCCATCACGTCGGGCAAGATCGACACCTACGCTGCCTTTCCTGACGAACC---------GGAGGAC
CTCGTCAAGCTCAGTTCCTTCCTGCAGTTGTTCGTTG---CCACAAAACATCTCCACTTGTGCTCCACTCGGATGGGCTC
CTGTTTCGTGAACCTCCCTGAGTTCCCGAGCCTCACCCACCTCGAGCTCAATGGACGCGTACTTCAATGTGACGATCCCG
CCTTGGCCATTGCCGTGACGTGCACAATCCTCAGTCAGGCCCCTAACCTGGAGCTACTGACCCTGGTATTCCAAGCA---
GCGCCTCAAGATCAAGAGTCGCAGCAGTGCAACGGCCCCTACCGTGGCCGCATCGAGGGGGAGCTCGTCGACGTGCACCT
TCTCCACTACGACAAGTACGACACCATTGACTATGCGCTGCTGATGGTTAACACGCCGGTCCCGCCCTGCCTCGTGAACC
GAGTGAGCAAGATCGAGTTGGTGCATTACCAAGGCGGCAGAGCGCAGAGGGCGCTGGCCAAGTTCTTGCTCGGCAACGCT
CCTGCGCTCAAGATGCTCTATTGTGGATTTGCGGAGGGCCCGGAGTGGATTCAGATGCAATTGATGCGTGAGATTCAAGG
CTGGGTGATCAATGAGACAGCTAGCAAGGAGTTCCGTTGATGGATGCTTGCTTGGTAT----GTTTGCAACTGCAACACA
AATTCTAGTGATGATTATAGGTGTAGCCAGAGTAATTTCATTTGGAAAACATTGCATTCTTGTTTCCCTACAAGATTCTA
CGCATGCAAAAGATTTAATAACTGTACAGAGTATCAGTGCCAAACCTCCTCATATAATCTGTGACAGATAATCTTTGATT
TCTTGCATCCATATTTCAAAAAGCTGCAGGATTATTTACTTTGGTTTGTAATTTGTGCAAACATAAGTTAAAGGTT---G
TGGTAAAGTGGTAAGAAAAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr3A_1036
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CGACCGCCTGAGCAACCTCCGCGACGGCGTGATCGGCCACATCCTCTCCTTCCTCGACGCCAAGGAGACCG
GCCGCGCCGCGGCGCTCTCGTCGCGCTGGCGGGACGTCTTGGGCAGCGTCCACACCGTCTCCCTGGAGCAGCCGGAGCGG
CCCTACTTCATCTACGACCGCGGCAGCATGTACGACCGCGGCGTG---------GCGCGGCGCCTCATCGCCGCCGTCAA
TGCCGCCCTCTTTTCGCGCTACCGGCGCCCCTACCCTGCCGCCGCCACGGTGCCCCTGCGAGCGCTCCGCGTGTCCCTCG
AAGGGTTCAACCCCGACGACAAGTCCGGGGTGGACCTGTGCCTCTCCTACGCCCTGAGGCATGCCGCCCCCGAGTTCGAC
CTCGACTTCCGCTTCGGCCGCGACTCCGCCTGCGGCCGCTACGACCGCTTGGACGC------------------------
------------------------------------------------------------------------CGCCGATG
CTGAT----------------------------------------------------------AACGATGACGATGTCGC
CGCCTATAGCCCAGTCGAGGTTCGAGCCGTCGCTGTGAGTCCGCGGAGGAAGTCTCCCGAGTCCGACGACCATTCCCACG
GGGTGCGCCCCGAAGACGAAGACGAAGACGATGTCTCGTCCAGCGACGACGATGACAAGAGGGTTGCTCGACCGTGGAAT
CGGCCGTCCCTGGAGTACACCGTACTAAGTGG---------------GCTCTTGTCCTGTGCCACGCTGCGATCCCTCCG
CCTCGGCTACTGCAGGCTCTCCCCGCCGGTGGCCATCAGCCTGCCGTCGCTCGAGGCGCTCCACCTCACCCACGTCCCCG
ACGAGGAGGAGCACGTGCAGAGGCTCATCTCCGCCTGCCCGCGGCTTGCGGACCTGACGCTCGAGGCCTGCGGCACGGTG
ACCGCACTCTCCCTCCTGGACAACGCGTGCCTCCGTAGGCTGGCCATCCGGTGCTGCCACAAGCTGGCCAGCCTCGCCGT
CGACGCACCAGAGCTCCACTCCTTGGAGTACCGTGGCCCTGTCCCCGACGACTCATTCCTCACCGTGCGTGGGGGCGGCG
GCGGCGGCTTCCCGGCCGTCACGTCGTGCAAGATCGACATCCTC------------GAGGAGGCCACGTCGGAGGAGGAG
CTCGCCAATCTTGGCTCGTTCCTGCAGCAGTTGGCCTCGACCACGAAACACCTCCGCCTACGCTCCGCTCGCATGGGCTC
CTGTTTCGTGAATCTCCCGGTGTTCCCTTCCCTCCGCCACCTCGAGCTGAACGGAAGTGTGCCGCGCAGCGATGACCCCG
TCGCCGTCGCCGCGTGGATGAGCAGCGTTCTTATGCAGGCCCCGAACCTGGAGCTCCTGTCACTTTTCTTCGAAGCA---
GCGCCTCGCGCCGACGGCCACTTCGCGGACGCTGGGCA------------CAGCAAGGGGGAGCTCCTCGAAGCGCACCA
TCTGCACTACTCCCGGTACGACAGCCTCGACTACGC---GCCGGCGGT---------GGTCCCGCCGTGCCTTGGAAGCC
GGGTGAGGAAGGTGGAGTTGCTGCAGTACCAGGGCGGCAGAGCGCAGAGGACGCTGGCCAGGTTCTTGCTCCGCAACGCG
CCGGTTCTTGAGCAGCTCTACTGTGGACTCGCGGATGGGCCGGAGTGGGTTCAGAGGGAATTGAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>SNPs
------------------S---------------------SS-SSS-SS--S----------------------------
-SSSS-S-SS-----S----------------------------S-S---SSSSSSSSSSSSS-----------------
-S------------S--------------------------------SS-----S----S-----S--------------
-----------------S-------------------------------------S-S-------------------S--
------S--------S------------------------S---------------S--------S-S-S----------
-----------S----------SS-----S------S-S-----------------------------SS----------
S----S-----------------------------------------S---------------S--SSSSSSSSS--S--
------------------S-------SSSSSS-S-SSSSSSSS------S--S----S---S-S--S---SS--S-----
-S-------S----------------------SS----------------------------------------------
-----------S---------------SS-S-SSSSSS-SS-----------S----------------------SSS--
-S----SS------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S----S-S--S---------------------SSSSSS----S---S-S-------------------------S-----
--------S--------------------------------------------------------------------S--
------------------------------S----S----S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S---------------S------S------------------
-------------------------------------S-------------------------S------S---------
---------------------------------------S------S----------------SS---S-----------
--------S----S-------SS----------------------------S----------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
------------------------------------------------------------------------S-------
------S----S---S--------------------------S---------------------------S----S----
-S------------------------------------------------------------------------------
---------S------------------S-----------------------------------------------S---
S-------------------S-----------------------------------------------------------
---S--S----------------S---------------------------S----------------------------
---------S---S------------------------------------------------------S-S---------
------------------S------------------------------------S--S--------S------------
----S--------------------S-------S-------------------------------------------SSS
---------------------------S--------------------------------------------S-------
--------------------------------------------------------------------------------
-------------S-------------------------S----------------------------------------
------------------------------------------------S--------------------------S----
----------------------------------------------------------SSSS--------------S---
-----S------SS-SS--SSSSSSS-----------------------------S------------------------
----------------------------------------S---S---------S---S-----------------S-S-
--------------------S-S--------------S------------------------------S------SSSS-
-------SS-----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_125
--------------------------------------------------------------------------------
-------------------------CCCATTGCTAGATGCCTGCA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_2904
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CCGTGCAAGATCGACACCTA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>forward_2038
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------ACTACTCCACGGTGGGCTTA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_4248
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CCCCTCGAGTGTTTTTGGGA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
