>input_sequence_46272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------ATGGCGGCGGCCGGCGGCACCTCCTCCGACGATGTCCCCGTCATCCAGGCAGAGAACCTCACCAGCAA
CGTCAGGTCCATCCTCTACAGGTACGCGCCCCTCTCTTCCGCGCACCCCCCCTTCTCTTCCCGATGGGTTCGACGGTGGA
CTCGATCTGATCTGGACTCTGGAGGTGTGCTCAGTTTATG-TTTTTTTAGCTTGTTCAGGTTTGATCCGAGCGTATCTCG
TGGATCATTAGCGTAAGTGCTGGTCGCTGGATGTTTCACTACAAGTATTCGAGGGGAGTG------------GATTTTTA
TTTTTCGTTT----TTGAGCAAGGGGACGACGACTTTGGAATTAGT-GTTTCTCCTGGAACTATGATGCGCTAACAACTT
CACACAGTGAATTGGAACTTTTGGTAGCTGGGTGGTGGATTGATTTAAAATAATTCGCTTAGATTTTCCTGCTAGGTTGA
GATGCATTGTACGTT---GGAGTCTGGACTGGGGGGAACAGCCTTAAAATTGGTGAAC----------------------
----------GGTGGGCATGCCTCTCAGATGTTAGATCCACTAGGTGTATCTAGTTTTCGAGTGGAAGGGGTATAGAAGT
GATGCTCTTGTTGGTTCCCTATATGCTTGAGACTCGTATGGAAAGCTGGT--TAGACAATGTAATTACAGTTCGGTAACT
ATTTTAACTTGTTTGGTTGGTGGTGGACATACATAA-TACTGTAGTAACAGGCTTCAAGCACTGATTGTTTTCTGTGTGA
TGATACACTATCAAGTTTCCTGTTTCCATTTTGTCGATAACACCTTTTCGACTATAAGGAATTACCCTAGACTTTTTGCT
TATCTGCTATTTAACCAAACAGGGTTTGTCCTGAGCATGATGATTTGTTCGTTTTACAGCCGGACATTCTTGTCGATCAT
CAGTGGAGTTGTTGCTGGTATCTGGGGGTTCACAGGTCTGACGGGCTTCGTCTTCTACTTTCTGATAATGTTGGTAGCTT
CTATTGGGCTCTTGGCAAAGTCGAAGTTCTCAGTCCACACGTACTTTGATAGTTGGAGCAGGATTTTAGTTGAAGGAGTT
TTGGCCGGCCTTATGGTAAGTATTGTTGCCATCATGAGTATTCTGTGGTTTACACCCTAACTGCATAAATATTTTGACCC
TTGGATGCTATTTTATATACTGTTGAAATATGTCATGTACAAACACTATTATCCGTCTTTGGTTTTAGTCTAAATTAATT
TAGGAAGCTATTGAACATTTAGTTGGATCCAGATGAGTTCTTATTTGGTACGGCTGTCACAAAACCTGAAGTTTGGACCA
GGAGTTATACAAGCATATACAACTCTAATTTGCCACTATGTTCAAAGATTAGCTGTAGCATTAGATAATCCAGTAGGGCC
ATAACCATGAATAAAAGTG-AACTTGGGAGGACTATTATCTATTAACGTATCTATGTTATAGTTAATGGCCACTCATGTC
CTTTGATAGATGTTGCAAAATGATCCAAACAAGACTGTT--TATTCTACTCAGTTGCCATATGTATTCTGTATGTTCTCG
TTTTTAAGTTTATCTTCTAATATTTGCTCATTACAATGAGCTTTTGCTTTGTGTGATGTTCTAACATTGTGAATTTTTCA
TTTGCAGTCCTTCGTGCTGTTCTGGACGTATCCTTGA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr1D_1_TraesCS1D01G389000
TCTATCAAAGGGTTCAACGCCGATGAATATTGCTCCCGGGCAATGGTCCTTAGGGGCATGTGCATGAAGACTCCCCATCT
GTCATCAACATGGTCAAGCCGGCTCTGATGAGGGAACGACGACATCGGCGCATCGACGGCTCGTTCTATTGGTACTGGTG
ATTGTCCGGTGGTTTAGAGATCTTGATGTAATTA-TTATTATGTTTAAGGTGATTTG--TACTTCCGATGAACATATACA
ATATATCCAAATCTTTTTCGTAATAAAATAAATTATATCATAGGTGTGCAATTGAGGGTATTCAACTTAAACAGTGAACC
ATTGATACAAAATGTAGAGGTACCTCTG--TAGGACAA-TAATGTGGGGAGGAGGTAGTAGAAAATTCTTGTA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TACAATTCTAGCTAAACAGATTTCTCCCCTCAACTTTATCACAAAATATAAAAAGACAGACTTGAACCTAGGGATAGTTA
TAAAATTTCCTATTTTTAGGGGCCTATTTGCAATGTTTTCAATACAGTCGTG--TTTTCTGGTCAGTCTC-TAGTTTCTC
ACGTGTGTCTGACTATGTAACTTTATTTTCTATCAGTGAAATAAATTATATGGTTGCTCTAAAAGAACGTAG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TTTGATAAAGTCCAAACT
CCTTTTGCTCATATTTACTCCCTCCGTAAAATAATATAAGAGCTTTTAAATCACTACTTTATAGTGATCTAAACACCCTT
ATGTTTTTTTTACGGAAGGAGTGTTTTTCAAGCAACTCTGCAAATCAAGTATACG-------------------------
--------------------------------------------------------------------------------
-------------AGGATTTCCCAA-AAAAAAGAGTAGACGGTAGAATTCGTG-------AAAAAAGAAAAGGCTGAGGA
CGAGCAGGCGAAAACATCCCTAAGATCTCCCTCAGAAAAAAAAAGAAAACTAGACCAGGTCCACCGCCAAGCCACCCAAC
CCCGTCCCCGTGCAGTCGAGCCGTCCAGATCGCTGCCGTCCCAGACTCTCCGCCCCCAAATCTCGCCCGGAGAAAAGAGA
GATTTCGCGGCGATGGCGGCGGCCGGCGGCACCTCCTCCGACGATGTCCCCGTCATCCAGGCAGAGAACCTCACCAGCAA
CGTCAGGTCCATCCTCTACAGGTACGCGCCCCTCTCTTCCGCGCACCCCCCCTTCTCTTCCCGATGGGTTCGACGGTGGA
CTCGATCTGATCTGGACTCTGGAGGTGTGCTCAGTTTATG-TTTTTTTAGCTTGTTCAGGTTTGATCCGAGCGTATCTCG
TGGATCATTAGCGTAAGTGCTGGTCGCTGGATGTTTCACTACAAGTATTCGAGGGGAGTG------------GATTTTTA
TTTTTCGTTT----TTGAGCAAGGGGACGACGACTTTGGAATTAGT-GTTTCTCCTGGAACTATGATGCGCTAACAACTT
CACACAGTGAATTGGAACTTTTGGTAGCTGGGTGGTGGATTGATTTAAAATAATTCGCTTAGATTTTCCTGCTAGGTTGA
GATGCATTGTACGTT---GGAGTCTGGACTGGGGGGAACAGCCTTAAAATTGGTGAAC----------------------
----------GGTGGGCATGCCTCTCAGATGTTAGATCCACTAGGTGTATCTAGTTTTCGAGTGGAAGGGGTATAGAAGT
GATGCTCTTGTTGGTTCCCTATATGCTTGAGACTCGTATGGAAAGCTGGT--TAGACAATGTAATTACAGTTCGGTAACT
ATTTTAACTTGTTTGGTTGGTGGTGGACATACATAA-TACTGTAGTAACAGGCTTCAAGCACTGATTGTTTTCTGTGTGA
TGATACACTATCAAGTTTCCTGTTTCCATTTTGTCGATAACACCTTTTCGACTATAAGGAATTACCCTAGACTTTTTGCT
TATCTGCTATTTAACCAAACAGGGTTTGTCCTGAGCATGATGATTTGTTCGTTTTACAGCCGGACATTCTTGTCGATCAT
CAGTGGAGTTGTTGCTGGTATCTGGGGGTTCACAGGTCTGACGGGCTTCGTCTTCTACTTTCTGATAATGTTGGTAGCTT
CTATTGGGCTCTTGGCAAAGTCGAAGTTCTCAGTCCACACGTACTTTGATAGTTGGAGCAGGATTTTAGTTGAAGGAGTT
TTGGCCGGCCTTATGGTAAGTATTGTTGCCATCATGAGTATTCTGTGGTTTACACCCTAACTGCATAAATATTTTGACCC
TTGGATGCTATTTTATATACTGTTGAAATATGTCATGTACAAACACTATTATCCGTCTTTGGTTTTAGTCTAAATTAATT
TAGGAAGCTATTGAACATTTAGTTGGATCCAGATGAGTTCTTATTTGGTACGGCTGTCACAAAACCTGAAGTTTGGACCA
GGAGTTATACAAGCATATACAACTCTAATTTGCCACTATGTTCAAAGATTAGCTGTAGCATTAGATAATCCAGTAGGGCC
ATAACCATGAATAAAAGTG-AACTTGGGAGGACTATTATCTATTAACGTATCTATGTTATAGTTAATGGCCACTCATGTC
CTTTGATAGATGTTGCAAAATGATCCAAACAAGACTGTT--TATTCTACTCAGTTGCCATATGTATTCTGTATGTTCTCG
TTTTTAAGTTTATCTTCTAATATTTGCTCATTACAATGAGCTTTTGCTTTGTGTGATGTTCTAACATTGTGAATTTTTCA
TTTGCAGTCCTTCGTGCTGTTCTGGACGTATCCTTGATAAATTAATATGTGCTATTCTTTCTGAATATATCAAGCCCTTT
TACTGCTTTTCTGTACCCACCCCCATCCTATTTTAACCGCTCCTGTGTTGATATA--TTTTTGCTTGAGTTCATCCTTGA
CACTTACCAGATTTGCGTATGATATCGTCCACATCTTCTGAGTT-------CTGATGGAAGGAGAGTCTGATGAACACAG
CATGTTGCATCTTCTGATGGAAGGAGCTAATGTCAGATGAAGCAAGCATATGCAAGATTTCCCCTTAACATGATGGAACA
ATGGAGTCTCATCGTTATCACATTTTTGTTGTTAGTTACTACTCCCTCCGTAAACTAATATAAGAGTGTTTAGATAACTA
CTTTAGTGATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTACTATTACTGTCTAGTTTGGTGAACTGCAACGCAACA
-TTGTATATGCCTATTTGATGGCCAGTGTATCAGATATCACAGGTGTAACACAACACTTAAATTCGTTTACCCATGTCGT
AGTTCACCTGATGATCCGAAACAATTACATCACATCATTTCCGCCGTTCATGCTGTTGAATCACTTGCGATGAAAATGCT
ATTAATCTTATAGGCAATGGCTTCTAAATGTGTCCTCATTTGTTGTATACAATTCGGTTAGCTTGCTTTTTAAAAACAAC
ATATAATCTGTCTTGTGTTTTTGATCCTTTTTTGTCAAAATGTTGTGTGTTTTTCAGCTGATTTTGATTGTTTTTTTTTC
AATTTTTTG-AGATTATATACTACTGCTGCTTTAAGTTTTGAGAGAGAAGCATGACCTCATGAATCGTAATGGGCTCATT
GGGCTGGGTTTACTATATGGGCCTAAGTCCAGATCCAAAGTCGCAGGCCATGGTTTCATTTCCAAAACCCAATTCCCACA
GAGCATCGCTCCCACTGGCCCCAGAACCCTAACCTCCGTCTCCACCATGGCCTCCTCCCTCCTCCGCTCCGGCCAGCGCC
TCCTCCGC
>chr1A_1
TCTATCAAAGGGTCCAACGCCGATGAATATGGCCCGCGAGCACTGGTCCTTAGGGGCATATGCACGAAGACTTCCCATCT
TTCATCAATATGGTCAAGCCGGCTCCGACGAGGCAACGACGACATTGACGCGTCGACTGCTCGTTCTACTAGCAGTGGTG
GTTGTCCGTTGGTCTAGAGATCTGGATGCAATTTTTTATTATGTTTAAGGTGCCTTTTTTACTTCTGAT-GAATTTTATA
ATATATCTAAATCTTTTTCGCAATAAAATAAATTATATCGTAGGTGTGCAATTGAGGGTACTCAACTTAAACAGTGAACC
ATTGATACAAGCTGCAGAGGTACCTTTGTATAGGACAATTAATGTGGGGCAGAGGTAGTAGAAATTTTTTCTA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TACAATTATAGCCAAACAGATTTCTCCCCTCAATTTTATCACAAAATATAAAAGGACAGACTTGAACCTAGGGATAGTTC
TATATTTTTTA--TTTTAGGGGTCTATCTGCAAAGTTTTCAGGATATTCGTGCTTTTTCTGGTCAATCTTTTAGCTTCCA
TCGTGTGTTTGGCTATGTAGCTTTATTTTCTATCAGTGAAATGAATTACGTGGTTGCTCTAAATAAACGTACTTGAGGCG
GAACTAAGTGCCTGTATGGAAGGCATGTCCCTTGCACTGGAGTGGAGTCGGCAGGATGCCCTTGTTGAAACAAATTCCAT
GAAGGTCGTTAAGATGATTAATAATCCATCTCGAGATAGCTCACAGCTGGGTCATCTAGTTGAGCACGTGAAGCATCTCA
TGAAGCAAGTGAGGCGTTTCGTTGTCAACAAAATCTCCCAGGAAATGAACCAAGCGAGCGATCTACTTGCTCGTTTTGGT
CGTCTAGAGGAACGAACGGTAGTTTGGTTAGGATCAGTGCCTGATAAAATATTAGACCTCATCCTACGAGATTGTAATGT
GACTATTATTCAAACAATACAATCCCTTTACCCCGCAAAAAAATAAAAAAAAATAAACGCACTTTGACAAAGTCCAAACT
CCTTTTGCTCATATTT----------------------------------------------------------------
------------------------TTTCCAAGCAACTCTTCAAAACAAGTAGTAT-------------------------
--------------------------------------------------------------------------------
--------ACGATAGGATTTCCCTA-A-AAAGAAGTAGACGGTAGGATTC------CTGAAAAAGAGAAAAGGCCGAGGA
CCAGCAGGCGAAAAACCCCCTAAGACCTCCCTCAGAAAAAAAAA---AACACTAC-----------------GACCCAAC
CCCGTCCCTGTGCAGTCGAGCCGTCCAGATCGCTGCCGCGCCAGACTCTCCGCCCCCAAATCTCGCCCGGAGAAAAGAGA
GATTTCGCGGCGATGGCGGCGGCCGGCGGCACCTCCTCCGACGATGTCCCCGTCATCCAGGCGGAGAACCTCACCAGCAA
CGTCAGGTCCATCCTCTACAGGTACGCGCCCCTCTCTTCCGCGCACCCCCC-TTCTCTTCCCGTTGGGTTCGGCGGTGAA
CTCGATCTGATCTGGACTCTGGAGGTGTGCTCAGTTTAGGATTTTTTTAGCTTGTTCAGGTTTGATCCGAGCGTATCTCG
TGGATCATTAGCGTAATTGCTGGCCGCTGGATGTTCTAGTACAAGTATTCGAGGGAAGGGACGAGGGGAGTTGATTTTTT
TTTTTCGTTT----TTGAGCAAGGGGACGACGACTTTGGAATTAGT-GGTTCTCCTGGAACTATGATGCGCTAACAACTT
TACACAGTGAATTGGAACCTTTGGTAGCTGGGTGGTGGGCTGATTTAAAAGGATTTGCTTAGATTTTCCTGCTAGGTTGA
GATGCACTGTACCC--------------------GGAACAGCCTTAAAATTGGTGAACAGCAAAGCTAAACTGGTGAAGT
GATTTGATCTGGTGGGCATGCCTCTTAGATGGTAGATCCACTAGGTGTATCTAGTTTTC------AAGTGGTATAGAAGT
GATGCTCTTGTTGGCTCTCTGT--GCTTGAGACTCGTATGGAAAGCTGTTTATAGACAGTCTAATTACAGTTCAATAACT
ATTTTAACTTGTTTGGTTGGTGGTGGACATACATAA-TACTGTAGTTACAGGCTTCAAGCACTGATTGTTTTCTGTGTGA
TG-TACACTATCCAGTTTCCTGTTTCCATTTTGGTGATAACACCTTTTCGACTATAAGGAATTACCCTAGACG------T
TATCTGCTATTTAACCAAACATGGTTTGTCCTGAACATGATGATTTGTTCGTTTTACAGTCGGACATTCTTGTCGATCAT
CAGTGGAGTTGTTGCTGGTATCTGGGGGTTCACGGGTCTGACGGGCTTCGTCTTCTACTTTCTGATAATGATGGTAGCAT
CTATTGGGCTCTTGGCAAAGTCAAAGTTCTCAGTCCACACGTACTTTGATAGTTGGAGCAGGATTTTAGTCGAAGGGGTT
TTGGCCGGCCTTATGGTAAGCATTGTTGCCATCATGAGTATTCTGTGGTTTACACCCTAACTGCATAAACATTTTGACCC
TTGGATGCTATTTTATATACTGTTGAAATATGTCATGTACAAACACTATTACCCGTCTTTGGTTTTAGTCTAAATTAATC
TAGGAAGCTATTGAATATTGAGTTGGATCCAGATGAGTTCTTATTTGGTACGGCTGT--AAAAACCTGAAGTTAGGACTA
GGAGTTATACAAGTATGTACAAGTCTAATTTGACACTATGTTGAAAGATTAATTGTAGCTTTAGATAATGCAGTAGGGCC
ACAATCATGAATAATAGTGAAACTTGGGAGGAATATTATCTATA---GTATCTATGTTATA----ATGGCCACTCATGTC
CGTCGATAGATGTTTCAAAATGATCCAAACACAACTGTT--CATTCTACTCAATTGCCATTTGTATTCTTTATGTTCTCG
TTTTCAAGTTTATCTTATAATATTTGCTCACTACAATGAGCTTTTGCTTTGCGTGATGTTCTAACATCGTGAATTTTTCA
TTTGCAGTCCTTCGTGCTGTTCTGGACGTATCCTTGATAAATTAATATGTGCTATTCTTTTTGAATATATCAAGCCCTTT
TACTGCTTTTGTGTACCCACCCCCATCCTATTTTAACCGTTCCTCTGTTGATATA--TTTTTGCTTGAGTTCATCCTTGA
CATCTACCAGATTTGCGTACGATATCGTCCACATTTTCTGAGTT-------CTGATGGAAGGAGAGTCTGATGAACGCAA
CATGCTGCATCTTGTGATGGAAGGAGCTAATGTCAGATGAACCAAGCATATGCAAGATTTCCCCTTAACATGATGGAACA
ATGGAGTCTCATCGTTATCCG-TTTTTGTTGTTAGTTAC-----------------------------------------
------------------------------------------TACTATTACTGTCTAGTTTGGTGAACTGCAAC-----A
-TTGTATATGCCTATTTGATGGCCAGTGTATCAGATATCACGGTGTAAACACCACACTTAAATTCATTTACCCATGTCGT
AGCTCGCCTGATGATCCAAAACAATTACATCACATCATTTCCTGCGTTCATGCTGTTGAATCACTTGCGATGAAAATGCT
ATTAATCTTATAGGCAATGGCTTCTAAATGTGTCCTCATTTGTTGTATATAATTCGGTTCACTTGCTTCTTAAAAACAAC
ATATAATCTGTCTTGTGTTTTTGATCCTTTTTTGTCAAAATCT--TGTGTTTTTTAGCTGATTTTGATTGATTTATTTTC
AATTTTTTG-AGATTATATACTACTGCTGCTTTATTTTTTGAGAGAGAAGCATGACCTCATGTAACATAATGGGCTCATT
GGGCTGGGTTTACTTCATGGGCCTAAGTCCAGATCCAAAGTCACAGGCCATGGTTTCATTTCCAAAACCCAATTCCCACA
GAGCATCGCTCCCACTGGACCCAGAACCCTAACCTCCCTCTCCACCATGGCCTCCTCCCTCCTCCGCTCCGGCCAGCGCC
TCCTCCGC
>chr1B_1
TCTATCAAAGGGTTCAACACCGATGAATATGGCTCCCGTGCGCTGGTCCTTAGGGGCATATGCACGAGGATTTCCCATCT
GTCATCAACATGGTCAAGCCGGCTTTGATGAGGGAACGACGACATCGGCGCGTCGACGGCTCGTTCTACTAGCAGTGGTG
TTTGTTCGGTGGTGTAGAGATCTGGATATGAC-TTTTATTATGTTTAAGATGCTTTG--TACTTCTCAT-AACTTTTATA
ATATATTCAAACCTTTTTTGCAATAAAATAAATTATATCATAGGTGTGCAATTGAGGGTATTCAACTTAAATGGTGAACC
ATTGATAAAAACTCTAGAGGTACCTCCC--TAGGACAATTAATGTGGGTTGGAGGTAGTAAATAATTCTTCTATACTTTC
TCCGTTTTTATTTACTCTGCATATTAGTTTTGACCTAAGTCAAACTTTATAAAGTTTTGATCAAGTTTATCGAAAACGAT
CTAAACTTTCACAATAGCAAATATATATGAAAAATATATTGAATGATGATTCTAATGGTATTGATTTGGTATTGTGGATG
TTAATAATTTTGTGTATAAACTTGGTCAAAGTTTGACTCGAGACAAAGCTAATATGCGAAGTAAATAAAAACGTAGGGAG
TACAACTCTAGCTAAACAGATA--TCCCCTCAATTTTATCACAAAATATAAAAAGACATACTTGTCCCG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AAACGCACTTTGATAAAGTCCAAACT
CCTTTTGCTCATGTTTATGTTGCATTGC----------------------------------------------------
------------------------------AGCAACTCTGCAAAACAAGTACTCCATCAGTTTCAAAATATAAGTATTTT
TAGAGATTTCAATACAGACTACATACAGAGCAAAATGGGTAAATCTAAAATATGTCCAAGACTTTGTATGTAGAAACGGA
GGGAGTTGACGATAGGATTTCCTTATATAAAAAAGTAGACGATAGGATTTCTGAATCTGAAAAAGAGAAAAGGCCGAGGA
TGAGCAGGCGAAAATACCCCTAAGACCTCCCTCAGAAAAAAAAA---AACTAGACCAGGTCCACCGCGAAGTGACCCAAC
CCCGTCCCCGTGCAGTCGAGCCGTCCAGATCGCTGCCGCCCCAGACTCTCCGCCCCCAAATCTCGCCCGGAAAG-AGAGA
GCTTTCGCGGCGATGGCGGCGGCCGGCGGCACCTCCTCCGACGATGTCCCCGTCATCCAGGCGGAGAACCTCACCAGCAA
CGTCAGGTCCATCCTCTACAGGTACGCGCCCCTCTTCCGCGCAC-CCCCCC-TTCTCTTCCCGTTGGGTTCGACGGTGGA
CTCGATCTGATCTGGACTCTGGAGGTGCGCTCAGTTTGGGA-TTTTTTAGCTAGTCCAGGTTTGATCCGAGCGTATCCCA
TGGATCATTAGCGTAATTGCTCGCCGCTGGATGTTCCAGTACAAGTATCCGAGGGAAGGG------------GATTTTTT
TTTTTCGTTTTTGATTGAGCAAGGGGACGACGACTTTGGAATTAGCGGTTTCTCCTGGAACTATGATGCGCTAACAACTT
TACATACTGAATTGGAACCTTTGGTAGCTGGGTGGTGGACTGATTAAAAAGGATTTGCTTAGATTTTCCTGCTAGGTTGA
GATGCATTGTACTACCTGGGAGTCTGGACTGGGGGGAACAGCCTTAAAATTGGTGAAC----------------------
----------GGTGGGCATGCCTCTTAGATGTCAGATCCACTAGGTGTATCTAGTTTTCGAGCAGAAGGGGTATAGAACT
GATGCTCTTGTTGGTTCTCTAT--GCTCGAGACTCATATGGAAAGCTGTT--TAGACAATGTAATTACAGTTCAGTAACT
ATTTTAACGTGTTTGGTTGGCGCTGGTCATACATAAGTACTGTAGTAACAGGCTTCAAGTACTGATTGTTTTCTGTGTGA
TGATACACTATCCAGTTTCCTGTTTCCATTTTGTTGATAACACCTTTTCGACTATAAGGAATTACCCTAGATGTTTCGCT
TATCTGCTATTTAACCAAACATGGTATGTCCTGAACATGATGATTTGTTCGTTTTACAGTCGGACATTCTTGTCGATCAT
CAGTGGAGTTGTTGCTGGTATCTGGGGGTTCACGGGTCTGACGGGCTTCGTCTTCTACTTTCTGATAATGATGGTAGCAT
CTATTGGACTCTTGGCCAAGTCAAAGTTCTCAGTCCACACGTACTTTGATAGTTGGAGCAGGATTTTGGTCGAAGGAGTT
TTGGCCGGCCTTATGGTAAGTATTGTTGCCATCATGAGTATTCTGTGGTTTACACCCCAAATGCATAAACATTTTGACCC
TTGGATGCTATTTTATATACTTTTGAAATATGTCATGTACAAACACTATTACGCGTCTTTGGTTTTAGTCTAAATTAATT
TAGGAAGCTATTGAACATTTAGTTGGATCCAGATGAGTTCTTATTTGGCACGGCTGTCAAAAAACCTGAAGTTGGGACTA
GGAGTTATACAAGTATATACAACTCTAATTTGCCATTATGTTTAAAGACTGTTTAT------------------------
---------------------------------------------------------------------------ATGTC
CTTTGATAGATGTTGCAAAATGATCCAAACACAACTGTTTATATTCTACTCAATTGCCATATGTATTCTTCATGTTCTTG
TTTTCAAGTTTATCTTCTAATATTTGCTCATTACGATGAGCTTTTGCTTTGCGTGATGTTCTAACGTTGTGAATTTTTCA
TTTGCAGTCCTTCGTGCTGTTCTGGACGTATCCTTGATAAATTAATGTGTGCTATTCTTTCTGAATATATCAAGCCCTTT
TACTGCTTCTCTGTACCCACCCCCATCCTATTTTAACCGCTCCTGTGTTTGATATATTTTTTGCTTGAGTTCATCCTTAA
CACTTACCAGATTTGCGTATGATATCGTCCACATATTCTGAGTTGTGAGTTCTGATGGAAGGAGAGTCTGATGAACACAG
CATGTCACATCTTCTGATGGGGGGAGCCAATGTCAGATGAACCAAGCATATGCAAGATTTCCCCTTAACATGATGGAACA
ATGGAGTCTCATCGTTATCACATTTTTGTTGTTAGTTAC-----------------------------------------
------------------------------------------TACTATTACTGTCTAGTTTGGTGAACTGCAGCGCAACA
TTTGTATATGCCTATTTGATGGCCAGTGTATCAGATATCACGGTGTAAACACAACACTTAAATTCATTTACCCATGTCGT
AGTTCACCTGATGATCCGAAACAATTACATCACATCATTTCCTGCGTTCATGCTGTTGAATCACTTGCGATGAAAATGCT
ATTAATCTTATAGGCAATGGCTTCTAAATGTGTCCTCATTTGTTGTATACAATTCGGTTAGCTTGCTTTTTAAAAATAAC
ATATAATCTTTCTTGTGTTTTTATCCATTTTTTGTCAAACCTTATGTGTTTTTCCAGCTGATTTTCATTGATTTATTTTT
CAATTTATTTAGATTATATGCTACTGCTGCTTTAATTTTTGAGAGAGAAGCATGACCACATGAAACATAGTGGGCTCATT
GGGCTGGCTTTTCTATATGGGCCTAAGTCCAGATCCAAAGTCGCAGGCCATGGTTTCATTTCCAAAACCCAATTCCCACG
GATCATCGCTCTCACTGGCCCCAGAACCCTAACCTCCCTCTCCACCATGGCCTCCTCCCTCCTCCGCTCCGGCCAGCGCC
TCCTCCGC
>SNPs
------------------------------S-------S---S----------------S----S-------S-------
---------------------------------------------------S----------------S-S-S-S-----
S------------S---------S---------S------------------S------------S---S---S-S--S-
--------------------S-----------------------------------------------------------
-----------S-------------------------------------S--------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S---------------------------------------------S
--S-S---SSSSS---------S----S-----S-------SS-S-S------------------S---S----S---SS
S-------S--S-------S----------------------S-----SS-------------SS------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS---S----------------S------SS-S-------------------------
--------------------------------------------------------------------------------
-----------------------S---S----S------------S----S-------------S---------S-----
--------------S-S--------S------------------SSS--------------------S---SS-------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------S-----------------
---------------------------------------------------S-----------S----------------
--------------------------------------S-----------------------------------------
----------------S------S-----------S--S----------------S--S--------------------S
--------------------------------------------------------------------------------
S-----------------S--------------------S----------SS---S------------------------
------------SSS-----------------------------------------------------------------
-------------------------S------------------------------------SS----------------
-----------------S----SS------------------------S------------------------S------
--------------------------------------------------------------------------------
------------S---------------------S-------------------------------------S---S---
---------------------S------------S------------------------S--------------------
---------------------------------S------------------------------------S-------S-
----------------------S-----------------------------------------------S---------
---------------------------------------------------------------------S----------
---------------------------------------------------S----------------------------
-----------------------------------------------------------S-------------S----S-
-------------S----------------------------S--------SS------S---------S----------
-S--S---------S-----------------S----------SSSS--------------SSSS---------------
-------------------------------SS-------------------S----------------S----------
----S----------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------S--------------------------------------
---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------
-----------------------------------------S-SSSS------------------S--------------
------------------------------------------SS------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-SS-------------------------S---S-----
-----------------------------------S----------------------------S-S-------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------
>forward_65
---------------------------------------------GTCCTTAGGGGCATGTGCAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_1823
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGAGAACCTCACCAGCAA
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>forward_153
--------------------------------------------------------------------------------
-----------------------------------------------------CGACGGCTCGTTCTATTGGT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_2179
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TTTTGGTAGCTGGGTGGTGG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>forward_174
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CTGGTG
ATTGTCCGGTGGTT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_2254
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TTGGAGTCTGGACTGGGGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>forward_2039
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CTGGTCGCTGGATGTTTCAC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_4043
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GCCGTTCATGCTGTTGAATCA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
