>input_sequence_46256
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GTCTCTCTT-----CCTTGTTCCTAAACCCGCCTCTCTCTCCCTCTTTCACACACGCCTCT
CCCTCTTCCTCTCGCTCCTCTCTCTCTCTCTCGGCGTCCATTTCCTCTTCTTCTTGCTAGTTTGCTTCAA----------
AGTTGGGGCA----CGCGCGCGCGGAGATGTCTGAGGCGTCGGTTTTAAACCAGGCGGAGGTGGAGGACGCGGCGGCGGC
GGC------CGGGCTGGACCTGCCGCCGGGCTTCCGGTTCCACCCCACGGACGAGGAGATCATCTCGCACTACCTCACCC
CCAAGGCGCTCGACCACCGCTTCTGCTCCGGCGTCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGCATCTCCCA
GGTACACAACACACCCAAATTAAACTGCTCCTTTGC----ACTTTCTCTCATCTTGCTTGATCCCAGCCCCACCGGCCGC
GGGAATCTTGCCTTACTTACTCGCGTGTTTCGTCCGGACAGGCAAGGCGAAGATGGGAGAGAAGGAGTGGTACTTCTTTT
GCCACAAAGACCGCAAGTACCCGACGGGGACGAGGACGAACCGCGCCACCGAGAGCGGCTACTGGAAGGCCACCGGCAAG
GACAAGGAGATCTTCCGGGGGAGGGGCGTCCTTGTCGGAATGAAGAAGACGCTCGTCTTCTACCTAGGCCGCGCCCCCCG
CGGCGAGAAGACCGGCTGGGTCATGCACGAGTTCCGCCTCGAGGGCAAGCTCCCCCACCCGCTCCCGCGCTCCGCCAAGG
TTTGCTTTCG---CTCCTTCCGGATTCATTATTAAGTATTTCTCTCCTTAATTTCTTTCTGGGTTCATACATGATT---T
GCTAAATATG---ATATGATTTGCGTGCAGGACGAGTGGGCCGTGTCCAAGGTGTTCAACAAAGAGCTCACGGCCACCAA
CGGGGCAATGGCAGCGGCGGAGGCCGGGATCGAGCGAGTCAGCTCCTTCGGCTTCATCGGTGACTTCCTTGACTCTGGGG
AGCTGCCGCCCCTCATGGACCCTCCCTTGGGCGGCGACGTCGACGAAGTCATCGATTTCAAGTCCACCTCTGCCTACGCC
ACCGGTGCCCATTCCGGGCTGCAGGTTAAGATGGAACAGCACATGCCGCAGCAGCCGCCGCACATGATGTACTCGAGCCC
GTACTTCTCTCTGCCGGCCGCTAACTCCGGCGACATGTCGCCGGCGATCCGGAGGTACTGCAAGGCGGAGCAGGTCTCGG
GGCAGACGTCTGCGCTCAGCCCGTCACGCGAGACCGGGCTGAGCACCGACCCCAACGCCGCCGGTTGCGCGGAGATCTCG
TCGGCGGCGACACCGTCGTCTCAGAATCAAGACTTCCTTGACCAATTCGACGAGTACCCCGCCCTGAACCTCGCCGACAT
TTGGAAGTACTGAAGCCGGCCGGAGCTGCACCTACCACATCCACATGATTCTCGC-TCGATCGGTTCTGGCTCGTTGATT
AATTACTGAATTGGATTACTTAACTTGGTGTGTGATGCTG--GTTAGTGGTTTGCTGATGCAGCATCATCTTCTTTCCGG
AGGATTCTCGGG-----TGGGATCAGGTTA----CTATCCAGACAGACAGACAGACCTCCAGGGATTAGCTAGCTATAGG
CTTCCTTAATTATGTTA---ATTAAATTAATTAGTCCTA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr4D_1_TraesCS4D01G176000
AGCAAACAAGGCCACAACAGGAGCGCGTCACCATTTCGCCTTCCTTTTAAAGCGGGAGATGTATACCGCTTGATGAGTGA
AAGGTTGAAAACTTTGGGACCGCTCCCCGATGATGGCACCCAGCGTGTCCCGTCCACTTGGGAAAGGG-AAACCCTGCTC
GGCGAGTCGGATGCTCATCGCTTTTCAGTTGGGCCGCGAGGCAAAGCGCGCGCGTATCTTTGCAGAAAATTGTCGTGGTC
GCGGGCTCTCTGGATGGCACGTCGCTCCTGTAATAAACAAACAACCCAAGAAAGTCTCGAACTAAAAAGATGCGGATGAG
AAAGCAGAAGGGAACGGGACAACCACGGATCAATATCTGACGTGAACTGGATGTGTGGACTCCGCGAGAGTTACAAATA-
AGCTGCCATAGCAACCTCTGATCATCCTTTGATTTGAGTGGAAAAAAACTGGATGTGGTTAGTGTTACTAATCTATGTTT
CTCGCGTTGTGGCCCAGCGCGGATGGGTTGAATTCTTCTCGCTGCATGTGGGTGTGGGGATATGCCGGTTTCCTTCCAAA
GTCAG-GTAATGAAACCAACATTAAATC-AATGTGTATATATATGAACTACTAGTACTACTGTGGG--------------
TTTATATTTAAT------------------ATAAGAAGAAGTCAGGTTCTGTCCAACGCATGATTGCCGCGTTAGCCGTG
ATCGGACGTGAATATTCATTCCACGGGACAGGACACCGGCCGGTGGAGGAGGAGAAAATACTCTGAATGTGAGAGAG---
TTGGG-------------------GTTGGGGCCTAAGGAAGAGGATGAATCAAGAGCCATTAAGATTAGGACAAGTAATT
AGAGTTGCTTACGGGCCACACCCACAACTGCGCGCGGTAAGAAGTGAAAGACGGGAGGGGTCTTGGCTCGCAAGCCGCCT
CC-GCACGCGGCACGCCTCTCTCTCTCTCTCTCTCTCTCTCTGGGAGTGACCGCGTGGAGCCTTATATAAGCCGGCCCTC
GGTTCCTCCCCCCGGCCCAGTCTCTCTT-----CCTTGTTCCTAAACCCGCCTCTCTCTCCCTCTTTCACACACGCCTCT
CCCTCTTCCTCTCGCTCCTCTCTCTCTCTCTCGGCGTCCATTTCCTCTTCTTCTTGCTAGTTTGCTTCAA----------
AGTTGGGGCA----CGCGCGCGCGGAGATGTCTGAGGCGTCGGTTTTAAACCAGGCGGAGGTGGAGGACGCGGCGGCGGC
GGC------CGGGCTGGACCTGCCGCCGGGCTTCCGGTTCCACCCCACGGACGAGGAGATCATCTCGCACTACCTCACCC
CCAAGGCGCTCGACCACCGCTTCTGCTCCGGCGTCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGCATCTCCCA
GGTACACAACACACCCAAATTAAACTGCTCCTTTGC----ACTTTCTCTCATCTTGCTTGATCCCAGCCCCACCGGCCGC
GGGAATCTTGCCTTACTTACTCGCGTGTTTCGTCCGGACAGGCAAGGCGAAGATGGGAGAGAAGGAGTGGTACTTCTTTT
GCCACAAAGACCGCAAGTACCCGACGGGGACGAGGACGAACCGCGCCACCGAGAGCGGCTACTGGAAGGCCACCGGCAAG
GACAAGGAGATCTTCCGGGGGAGGGGCGTCCTTGTCGGAATGAAGAAGACGCTCGTCTTCTACCTAGGCCGCGCCCCCCG
CGGCGAGAAGACCGGCTGGGTCATGCACGAGTTCCGCCTCGAGGGCAAGCTCCCCCACCCGCTCCCGCGCTCCGCCAAGG
TTTGCTTTCG---CTCCTTCCGGATTCATTATTAAGTATTTCTCTCCTTAATTTCTTTCTGGGTTCATACATGATT---T
GCTAAATATG---ATATGATTTGCGTGCAGGACGAGTGGGCCGTGTCCAAGGTGTTCAACAAAGAGCTCACGGCCACCAA
CGGGGCAATGGCAGCGGCGGAGGCCGGGATCGAGCGAGTCAGCTCCTTCGGCTTCATCGGTGACTTCCTTGACTCTGGGG
AGCTGCCGCCCCTCATGGACCCTCCCTTGGGCGGCGACGTCGACGAAGTCATCGATTTCAAGTCCACCTCTGCCTACGCC
ACCGGTGCCCATTCCGGGCTGCAGGTTAAGATGGAACAGCACATGCCGCAGCAGCCGCCGCACATGATGTACTCGAGCCC
GTACTTCTCTCTGCCGGCCGCTAACTCCGGCGACATGTCGCCGGCGATCCGGAGGTACTGCAAGGCGGAGCAGGTCTCGG
GGCAGACGTCTGCGCTCAGCCCGTCACGCGAGACCGGGCTGAGCACCGACCCCAACGCCGCCGGTTGCGCGGAGATCTCG
TCGGCGGCGACACCGTCGTCTCAGAATCAAGACTTCCTTGACCAATTCGACGAGTACCCCGCCCTGAACCTCGCCGACAT
TTGGAAGTACTGAAGCCGGCCGGAGCTGCACCTACCACATCCACATGATTCTCGC-TCGATCGGTTCTGGCTCGTTGATT
AATTACTGAATTGGATTACTTAACTTGGTGTGTGATGCTG--GTTAGTGGTTTGCTGATGCAGCATCATCTTCTTTCCGG
AGGATTCTCGGG-----TGGGATCAGGTTA----CTATCCAGACAGACAGACAGACCTCCAGGGATTAGCTAGCTATAGG
CTTCCTTAATTATGTTA---ATTAAATTAATTAGTCCTAGGTTCATATCTTGATCTGTGTGTACATATCACTACAA----
--C--TATTCTGATTGTGATTAATTACTAGCAGTAGCAGCATGAGATGGAGTATACAATTAATGTGTGTAGATTAGGGGG
GACGACTTCAGATCCATTTGTGAATCGATTAATTTGGGCGCCGTTGATGAGCCAGCCAGCTAGCGCTAC------TA---
----------GCTTTGTATGTACATGTACCACCATTGATCATTAATTGCTTGAGTTTGACATGTCACTATGTGAATGGAT
GCTTTGTGTTCTCTCTGTACCGCTTTAAGCTTGTTAATTAATCGCTGGGTTACTCCTTTGTGGGCGCAACTCGACGAGAC
GAGAGGCACTAGTACCAGTTCTGGTGCTGCTCATGGGG------------------------------ACCTTCCGAAAT
CTAGCAAGGGGAGATATGGG-------------TGGATCATGGTTTTGGGCCGACGGATGGGGCCACCGCGGGCTTGGTT
GGATCGTCCGATTATTCCCGGACCACGTCGTGGTCATGGCGTCCAGTTGGTGAACTCGACACACATAGACGTACTCCTGC
TAGGCGCCGAGGTAGGCTACGTACAAGCTGCAGCCTTATCTCGTTTCGGAAAACCCTCGGCCCGCCCCGGCTCTCTCGTG
TCTCCAAGGCTCCAAGCGATC-----------------------------------------------------------
---AACCAACCCCAGCTCGACGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAACTTG
TCGCTCACACACACGGCGGCCGACGGCGACGAGCGGGACGGGACGGGCCAGCCGCTCGCTCGCCCTCGATTTTGCGTGCG
CGCACAGCACACACAGACACATACAGAGGTGAGGCGCGCCGGGAACCACTT
>chr4B_1
AGCAAACAAGGCCACAACAGGAGCGCGTCACCATTTCGCCTTTCTTTTAAAGCTGGAGATGTGTACCGCTTGATGAGTGA
AAGGTTGAAAACTTTGGGACCGCTCCCCGATGATGGCACCGAGCGTGTCCTGTCCACTTGGGAAAGGGAAAACCCTGCTC
GGCGAGTCGGATGCTCATCGCTTTTGGCTC-GGCCGCAAGGCAAAGCGCGCGCGTATCTTTGCAGAAAATTGTGGTGGTC
GCGGGCTCTCTCGATGGCACGTCGTTCCTGTAA---ACAGACAACCCAAGAAAGTCTCGAACTAAAAAGATGCGGATGAG
AAAGCAGACGGGAACGGGACAACCACGGATCAATATGTGACGTGAACTGGATGTGTGGACTCCGCGAGAGTTACAAA--T
AGCTGCCATAGCAACCTCTGATCATCCTTTGATTTGATT-GAAAGAAACTGGATGTGGTTAGTGTTACTACTCTATGGTT
CTTGCGTTGTGGCCGAGAGCGGATGAGTTGAATTCTTGTGGATGCA------TGTGGGGATATGCCGGTTTCCTTCCAAA
GTCAGAGTAATCAAACCAACATTAAATC-AATGTGTATATGTATGAACTACTACTACTACTACTACTCCTACTATGGGTT
TTTATTTAAGGGAGAAAATATT--TTATAAATAAGAAGAAGTCAGGTTGTGTCCAACGCATCGTTGCCGCGTTAGCCGTG
ATCGGACGTGAATATTCATTCCACGGGACAGGACACGGGCCGGTGGAGGAGGAGAAAATACTCTGAATGTGAGAGAGTTC
TTTTTTTTTTCTGAATGTGAGAAAGTTGGGGCCT-AGGTAGAGGATGAATCAAGAGCCATTAAGATTAGGACAAGTAATT
AGAGTTGCTTACGGGGCACA------ACTCCGCGCGGTAAGAAG-------TGGGAGGGGTCTTGGCCCGCAAGCCGCCT
CCCGCACGCAGCACGCCTCTCTCTCTCTCT----------GCGCGAGTGACCGCGTGGAGCCTTATATAAGCCGGTCCTC
GGTTCCTCCCCCCGGCCCAGTCTCTCTCCCTTCCCTTGTTCCTAAACCCGCCTCTCTCTCCCTCTTTCACACACGCCTCT
TCCTCTTCCTCTC-------------TCTCTCGGCTTCCATTTCCTCTTCTTCTAGCTAGCTTGCTTCGGTGCCCGGCGG
AGTTGGGGCACGCGCGCGCGCGCGGAGATGTCTGAGGCGTCGGTGGTAAACCAGGCGGAGGTGGAGGACGCGGCGGCGGC
GGCGGCGGCCGGGCTGGACCTGCCGCCGGGGTTCCGGTTCCACCCCACGGACGAGGAGATCATCTCGCACTACCTCACCC
CCAAGGCGCTCGACCACCGCTTCTGCTCCGGCGTCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGCATCTCCCA
GGTACACAACACACCCAAATTAAGCTGCTCCTTTGCGCGCA-----------CTTGCTTGATCCGAGCCCGAGCGGCCGT
GGGAATCTTGCCTTACTTAGTCGCGTGTTTCCACCGGACAGGCAAGGCCAAGATGGGCGAGAAGGAGTGGTACTTCTTTT
GCCACAAAGACCGCAAGTACCCGACGGGGACGAGGACGAACCGCGCCACCGAAAGCGGCTACTGGAAGGCCACCGGCAAG
GACAAGGAGATCTTCCGGGGGAGGGGCATCCTCGTCGGAATGAAGAAGACGCTCGTCTTCTACCTAGGCCGCGCCCCCCG
CGGCGAGAAGACCGGCTGGGTCATGCACGAGTTCCGCCTCGAGGGCAAGCTCACTCACCCGCTCCCGCGCTCCGCCAAGG
TTTGCTTTCGATCCTCCTTCCTGATTCATTATCAATTATTTTTCTCCTTAATTTCTCTCTGGCTTCATTCATGAG----T
GCTAAATATGAGTATATGATTCGCGTGCAGGACGAGTGGGCCGTGTCCAAGGTGTTCAACAAAGAGCTCACGGCCACCAA
CGGGGCAATGGCAGCGGCGGAGGCCGGGATCGAGCGAGTCAGCTCCTTGGGCTTCATCACTGACTTCCTTGACTCTGGGG
AGCTGCCGCCCCTCATGGACCCTCCCTTGGGCGGCGACGTCGACGAAGTCATCGATTTCAAGTCCACCTCTGCCTACGCC
ACCGGTGCCCATTCCGGACTCCAGGTTAAGATGGAACAGCACATG---------CCGCCGCACATGATGTACTCGAGCCC
CTACTTCTCCCTGCCGGCCGCCAACTCCGGCGACATGTCGCCGGCGATCCGGAGGTACTGCAAGGCGGAGCAGGTCTCGG
GGCAGACGTCTGCGCTCAGCCCGTCCCGCGAGACCGGGCTGAGCACCGACCCCAACGCCGCCGGTTGCGCGGAGATCTCA
TCGGCGGCGACACCGTCGTCTCAGAATCAAGAGTTCCTTGACCAATTCGACGAGTACCCCGCCCTGAACCTCGCCGACAT
TTGGAAGTACTGAAGCCGGCCGGAGCTGCACCTACCACAT------GATTCTCGC-TCGATTGGTTCTGGCTCGTTGATT
AATTACTCAGTTGGATTACTTAACTTGGTGTGTGATGCTCGTGTTAGTGGTTTGCTGATGCAGCATCATCTTCTTTCCGG
AGGACTCTCGGG-----TCGGATCAGGTTACTATCTATCCAGACAGACCGACAGACCTCCAGGGATTAGCTAGGCATCC-
---------TTAATCATGTTATTAAATTAATTAGTCCTAGGTTCATATCTTGATCTGTGTGTACATATCACTACAA----
--CTATATTCTGATTGTGATTAATTACTAGCAGTAGCAGCATGATGGT---TATACAATTAATGTGTGTAGATTAGGGGG
GACGACTTCAGATCCATTTGTGAATCGATTAATTTGGGCGCCGTTGATGAGCCAGCCAGCTAGCTCTACTACTAGTA---
----------GCTTTGTATGTACATGTACCACCATTGATCATTAATTGCTTGAGTTTGACATGTCACTATGTGAATCGGT
GCTT-GTGTTCTCTCTGTACCGCTTTGCACTTGCTAATTAATCACTGGGTTGCTCCTTTCTGG-----------------
------------------------TGCTGCTCATGGGG------------------------------ACCTTCCGAAAT
CTAGCAAGGGGAGATATGAGATAA---------------ATGGTTTTGGGCCGACGGATGGGGCCACCGCGGGCT-----
-------CCAATTATTCCCGGAGCACGTCGTGGTCATGGCGTCCAGTTGGTGAACTCGACACA--TAGACGTACTACCCC
TC-------------------TACAAGCTGCAGCCTTATCTCGTTTCGGAAAACCCTCGGCCCGCCCCGCGTCTCTCGTG
TCTCCAAGCGATCCAGCAGCAACGGAAGAGAGGAAGGAAACGAGCACATCCGTTGATCCTAACCAACCAAACAGCCAACC
AAGAACCAACCCTAGCTCGACGCGGGGTGTGGGGGC--------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GAAAACTTG
TCGCTCACACACACGCCGGCCGACGGCGACGAGCGGGACGGG-----CCAGCCGCTCTCTCGCCCTCGATTTTGCGTGCG
CGCACAGCAT--ACAGTCACATATAGAGGTGAGGCGCGCCGGGAACCGCTT
>chr4A_4
---AAACAAGGCCACAACAGGAGCGCGTCACCATTTCGCCTTCCTTTTAAAGCGGGAGATGTATACCGCTTAATGAGTGA
AAGGTTGAAAACTTTGGGAGCGCTCCCCGATGATGGCACCGCGCGTGTCCTGTCCACTTGGGAAAGGGAAACCCCTGCTC
GGCGAGTCGGATGCTCATCGCTTTTGGTTC-GGCCGCGAGGCAAAGCGCGCGCGTATCTTTGCAGAAAATTGTCGTGGTC
GCGGGCTCTCTCGATGGCACGTCGCTCCTGTAA---ACAAACGACCCAAGAAAGTCTCGAACTAAAAAGATGCGGAGGAG
AAAGCAGAAGGGAACGGGACAACCACGGATCAATATCTGACGTGAACTGGATGTGTGGATTCCGCGAGAGTTACAAATAT
AGCTGCCATATCAACCTCTAATCATCCCTTGATTTGATTAAAAAAAAACTGGATGTGGTTAGTGTTACTACTCTATGGTT
CTTGCGTTGTGGCCCAGCGCGGATGGGTTGAATTCTTCTGGCTGCATGTGGCTGCCGGAGTATGAA----------CAAA
GTCAGAGTAATCAAACCAACATTAAAACAAATGTGTATATGTATGAACTACCAGTACTGGTGTGGG--------------
TTTATTTAAGGGAGATTTTTTTTGTTATAAATAATAAGAAGTCAGGTTCTGTCCAACGCATGATTGCCGCGTTAGCCGTG
ATCGGACGTGAATATTCATTCCAGAGGACAGGACACCGGCCGGTGGTGGAGGAGAAGATACTCTGAATGTGAGAGCG---
TTTTTTTTTTCTGAATGTGAGAGAGTTGGGGCCT-A---AGAGGATGAATGAGGAGCCATTAAGATTAGGACAAGTAATT
AGAGTTGCTTACGGGCCACA------ACTGCGCGCGGTAAGAAGTGAAAGATGGGAGGGGTCTTGGCCCGCAAGCCGCCT
CC-GCACGCGGCACGCCTCTCTCTCTCTCTCTCTCTCTCTGCGCGAGTGACCGCGTGGAGCCTTATATAAGCCGGCCCTC
GGTTCCTCCCCCCGGCCCAGTCTCTCCCCCTTCCCTTGTTCCTAAACCCGCCTCTCTCTCCCTCTTTCACACACGCCTCT
CTCTC-----CTC-------------TCTCTCGGCGTCCATTTCCTCTTCTTCTAGCTAGCTTGCTTCGGTGCCCGGCTT
---------------------GCGGAGATGTCTGAGGCGTCGGTGATAAACCAGGCGGAGGTGGAGGACGCGGCGGCGGC
GGC------CGGTCTGGACCTGCCGCCGGGCTTCCGGTTTCACCCCACGGACGAGGAGATCATCTCGCACTACCTCACCC
CCAAGGCGCTCGACCACCGCTTCTGCTCCGGCGTCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGCATCTCCCA
GGTACACAACACACCCAAATTAAGCTGCTCCTTTGCGCGCACTTTCTCTCATCTTGCTTGATCCGAGCCCGACCGGCCGC
GGGAATCTTGCCTTACTTACTCCCGTGTTTCTACCGGACAGGCAAGGCCAAGATGGGCGAGAAGGAGTGGTACTTCTTTT
GCCACAAGGACCGCAAGTACCCGACGGGGACGAGGACGAACCGCGCCACCGAGAGCGGCTACTGGAAGGCCACCGGCAAG
GACAAGGAGATCTTCCGCGGGAGGGGCCTCCTCGTCGGAATGAAGAAGACGCTCGTCTTCTACCTAGGCCGCGCCCCCCG
CGGCGAGAAGACCGGCTGGGTCATGCACGAGTTCCGCCTCGAGGGCAAGCTCCCCCACCCGCTCCCGCGCTCCGCCAAGG
TTTGCTTTCG---CTCCTTCCTGATTCATTATCAAGTATTTTTCTCCTTAATTTCTTTCTGGCTTCATTCATGATTTGCT
GCTAAATATGA-TATATGATTCGCGTGCAGGACGAGTGGGCCGTGTCCAAGGTGTTCAACAAAGAGCTCACGGCCACCAA
CGGGGCAATGGCAGCGGCGGACGCCGGGATCGAGCGGGTCAGCTCCTTCGGCTTCATCACTGACTTCCTTGACTCTGGGG
AGCTGCCGCCCCTCATGGACCCTCCCTTGGGCGGCGACGTCGACCAAGTCACCGATTTCAAGTCCACCTCTGCCTACGCC
ACCGGTGCCCATTCCGGACACCAGGTTAAGATGGAACAGCACATGCCGCAGCAGCCGCCGCACATGATGTACTCGAGCCC
CTACTTCTCCCTGCCGGCCGCTAACTCCGGCGACATGTCGCCGGCGATCCGGAGGTACTGCAAGGCAGAGCAGGTCTCGG
GGCAGACGTCTGCGCTCAGCCCGTCCCGCGAGACCGGGCTGAGCACCGACCCCAACGCCGCCGGTTGCGCGGAGATCTCG
TCGGCGGCGACACCGTCGTCTCAGAATCAAGAGTTCCTTGACGAATTCGACGAGTACCCCGCCCTGAACCTCGCCGACAT
TTGGAAGTACTGAAGCCAGCCGGAGCTGCACCTACCGCAT------GATTCGCTCGTCGATTGGTTCTGGCTCGTTGATT
AATTACTGAATTGGATTACTTAACTTGGTATGTGATGCTGGTGTTAGTGGTTTGCTGATGCAGCATCATCTTCTTTCCGG
AGGATTCTCGGGTCGGATCGGATCAGGTTACTATCCATCCATC----CAGACAGACCTCCAGGGATTAGCTAGGCCTCC-
---------TTATGTTA---ATTAATTAAATTAGTCCTCGGTTCATATCTTGATCTGTGTGTACATACCACTACCACAAC
AGC--TATTCTGATTGTGATTA-------GCAGTAGCAGCATGATGGT---CATACAATTAATGTGTGTAGATTAGGGGG
GACGACTTGAGATCCATTTGTGAATCGATTAATTTGGGCGCTGTTGATGAGCCAGGCAGCTAGCGCTACTACTAGCTTTG
TATGGAATCCGCTTTGTATGTACATGTACCACCATTGATCATTAATTGCTTGAGTTTGACATGTCACTATGTGAATCGAT
GCTT-GTGTTCTCTCTGTGCCGCTTTACACTTGGTAATCAATCAAGACGAG-----------------ACTCGACGAGAC
GAGAGGCACTGGTACCAGTTGTGGTGCTGCTCATGGGGACCTTCCGAAATCTTTTTTTTTTTGAGACAACCTTCCGAAAT
CTAGCAAGGGGAGATATGACATGGATGGATGGATGGATCATGGTTTTGGGCCGACGGATGGGGCCTCCGCGGGCTTGTTT
GGATCGCCCAATTATTCCCGGAGCACGTCGTGGGCATGGCGTCCAGTTGGCGAACTC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
----------------------------------------S---------S-----------------------------
-------------------------SSS-SS-------------------------------------------------
-----------S---------------------SSS--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-S------------------------------S------S--
--S------------------------------------S-----------S----------------------------
-----------S----------------------------S---------------------------------------
-----S-SSSSS--------------------------------------------------------------------
--------------------------------------------------------------------------------
--SSS-----------------------------S---S-----------------------------------------
--------------------SSSSSS-------------------------S---------------S------------
----------------------------------------SS-S------------------------------------
---------------------------S----------------------------------------------------
-------------SSSSSSSSSSSSS----------------------------S-----S-------SS----------
--------------------------------------------SS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S----------------------------------------S-----S---------
-------------------------------SS---------------S--------S----------------------
--------------------------------------------------------------------------------
---------------------------S----S-----------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------S--------S--------------------S-----S-----------
---------------------S----------------------------------------------------------
----------------------------------------------------------SS--------------------
--------------------------------------------------------------------------------
-----------------S--S-----------------------------------------------------------
S--------S----------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------------------------S-----------------------------------------------
----------------------------------------SSSSSS---------------S------------------
--------------------------------------------------------------------------------
------------------S------------------------------------------------------SS--SSS
SSSSSSSSS-----------------------------------------------------------------------
--------------------------------------------SSSSSSS-----------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
----S----------------------SS----S---------S-------S-------S---SSSSS------------
----------S---------S-----------------------------------------------------------
------------------S----------------------------------------------------------S--
------S--S------------S----------------------------------------SS----------S-SS-
-SSSSSSSSSSSSSSSSSSSS------------------------------------------------SS---------
--------SSSS-S---SSSS-----------------------------------------------------------
------------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
---------------S--------------------------SSSSS----------S----------------------
---------SSS----S------S-----------------------S---
>forward_275
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCACGTCGCTCCTGTAATA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_1139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TCTCTCTCTCTCTCGGCGTC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_1136
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTCT
CCCTCTTCCTCTCGCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_3219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GGTGGATCATGGTTTTGGGC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
