>input_sequence_46180
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-----------------------ATGGTGGAGCGGGTGGTGGAGCGTGATCACCGTTTCCCTGCCGGAGACGCTGTGGTC
GCGCCCTGTTTCCCTGAGGATTTCATCATCACCTTGGCGGATCGTGTCCAGCGCGACCTGGTCTATGAAGGCCGCTTCAT
CGAGGTCGCTGGGGTGAAGTTTCAGCTCCGCCCCTGGTTCCCGCCGCCGGGCGGGCACAAGGTGTGGAGGTTCTACTGCC
GTGTCGCTATCGACCGTCTGCCGCTGAATGCCTGGGATTGGGACAGTGTCCAGGAGGTGCTTGGGAAGAATTGCTGGCTG
GACCTCATCGAGCGCCAGTCAACCAGCAAGAGGAACAGGTCAGCGCTGTTTGCTTGGCTCTGGACATGGAATCCGGATCA
GATTCCCCGAGCCTCAGACTTCAATTTGATCCATCGTCCTGATATTGTTCGCCCACGGGACTCGTTGCCGGAGGGGGTGC
CGGCGGAGGAGGGGAAGGAAGGCCCCCACTTCCCGGTCCTCATCCACTTGGACGTCGTCAAGGATTACACGCCACTGCCA
CCATCCGCGAGCCCAACCGAG---------GAATGGCCTCGCACATACACACACAAGGGTTGGAGGATGGGTGTGAAGGA
TGGAGAGGGCAGAACCAGAGCCGCCTCGACGGCCAGCCCCTACAACGCTGGCCGGCGCAGCGACGACGACCATGACGACG
GATTCGGTGGTGGCCGCAGGAAGAGGGGTAAGCGAGGAGGTGCGCGCAGAAGCTTCTGGCAGGGGGTGCGGGACCAGGCA
CAATGCAGGGATACTGCTGCCTATGCTCCGGCTCCCCGTGGCCGGCGCCGCCATGTTGAGGGCATGGCTCCTTCCCAGGT
CGCCATTTGTCTCCCGTTAGAGGTACGGCCCCAGGCCCCGGCTGATTCCCAACGCCGGCAAAGCCCGGCAGCACAAGACA
AGGTGTATGTCACCCCATCGCTGCAGGTGGTCCAGGGAGAGCGCGGCTCCGGTTCTAGGGAACAGGCCGACCACCAGCAG
CTCACAGATGAGGAGATCAATGACGCAGAGCAGCCAAACCCTGACCAGCAGCAACGCTCGGATGAGGAGCTCAGTGACGC
CCATAGTCTGCCTGCTTTGTCGGCTGGACAGGTTTTGCCACCTCAGGAGCTCATGGACCGTGCACGGAGGCTCTCTGTCC
TTGTGATGGAGAAGGAGGCTGGGGGCATGCAAGACTGGGGCCTTGCACCCACCCCTGGTGGTCTGATGCAGCTCTTCTCC
CCACCCCGGCAGAAGCAGCTCGCCCCTTGGGCCAGCAATGTGGTTACTGATGCAGCCTCCATTACCGCAGCGGGGGTGAC
ATCCTTCTTCCAGCAACGTACCAGCTATGAGTTGCCTCCCCTCCCGCCTTCTTTGGACGTTTGCAACCTCTCTGCATGGG
ATCTGCCTCCCCCAGGGACGCCAGCGATGGCCTGGGACCTACCTGTTTTTTCCCAGAATCCGTGCTGGCTACCAAGCTGG
GCAGAGATGCCTATGACGAACCCAAGCTGGGCCTCTGGACCTGAGGTGGTGTTAGGGCCAGGGATTCAGGCTTCACAGCA
GGACCATCCCCCTCCTGGACTAGACTGCGCTGATAGACACAGGGATGCAAGATCATTTGTCCAACAATCCATCGAGGAGT
AG------------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G395900
CGCACGCGGCCGCGTGTGGCCGTCGCGCCGCCGGCACGCGCCCGCGCACACTGTCGCCGGGGCCGGGCCCCCGAGCGCGC
CACCTCGCCGCCACATCGGCGTTCGGCCGCCTGATTAGCGCGCGCCGCCGTGTGTAGCGCACGCGGTTATAGTGGAAGTG
CTTTTCCGCATAGGTTTATGCACACCACCCGTGGGCCAGCGCCAACGCCGGCGACGCCTGACCCGAGGTAGTGCCTGTAT
CACTATGTGTGTGCACCTTTGGCTGC----ACAAACAGCAGCCGAGTGCAGAGGTA---TCTAGGCCCTAGACTAGATCC
GGGTCATGCTA-TTTTGTACCACGTGTACTAGAGCCAATGGAGCAGTGCCTGGCTGCCTGCGTTCCGTGCTCGGCTGGTA
GCACGGACGGGACGGGCAGCGCTGACCCCCGCGGGGCGAGTCGTGTCGTGTGTACGCGCCACCTTTCGCTTTCCCTTTCC
GCTTTTGCAGGTCCGCCACCGCAGGAGGG-----AGGGATCCGCGCGTTCGTGGAATCAAATCCGGACGGG-----GGCG
TCGCCCAGCCACCCGTCGCGGGCCGTAGACTCGTAGCTCTCCACCCCCCACTGTC----ACCAACCAGC-----------
CTTTCTCCTCCCGCACGAGCGAGACAAACA-------GCTAGCCTTCGGTCGCGTCGCCGTCCGGCGGTGGCGCCACCCC
CTCCGTTGCGTTCGGCGATTCGGAGGAAGTGGGAACCGTCGATGACTGCGG----AAGCGCGGATTTTAATTACTGACTG
AACTTTCCCTCGGAGACGCAGGCGAAACGGTATTTGTCGTGGA---GGGAATGGAT------CGGGTGCGCGCGCTCTAA
GCGCTGCACCTCAATTGGAAAATGATGGCTATTCTGTTTAGCGCTCGCTTTCACCCAGCTGCACGGCGAACCCTTCCTTT
TTTT----------------------------------------------------------------------------
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--------------TTAGAAAACACAGGCGAACCATTCAAAGTCTTGTTCTTAGACATATATACAGGTGAGCAGCAGCGA
CCTGCTCTGGCATCACTCCGGACATGGTGGAGCGGGTGGTGGAGCGTGATCACCGTTTCCCTGCCGGAGACGCTGTGGTC
GCGCCCTGTTTCCCTGAGGATTTCATCATCACCTTGGCGGATCGTGTCCAGCGCGACCTGGTCTATGAAGGCCGCTTCAT
CGAGGTCGCTGGGGTGAAGTTTCAGCTCCGCCCCTGGTTCCCGCCGCCGGGCGGGCACAAGGTGTGGAGGTTCTACTGCC
GTGTCGCTATCGACCGTCTGCCGCTGAATGCCTGGGATTGGGACAGTGTCCAGGAGGTGCTTGGGAAGAATTGCTGGCTG
GACCTCATCGAGCGCCAGTCAACCAGCAAGAGGAACAGGTCAGCGCTGTTTGCTTGGCTCTGGACATGGAATCCGGATCA
GATTCCCCGAGCCTCAGACTTCAATTTGATCCATCGTCCTGATATTGTTCGCCCACGGGACTCGTTGCCGGAGGGGGTGC
CGGCGGAGGAGGGGAAGGAAGGCCCCCACTTCCCGGTCCTCATCCACTTGGACGTCGTCAAGGATTACACGCCACTGCCA
CCATCCGCGAGCCCAACCGAG---------GAATGGCCTCGCACATACACACACAAGGGTTGGAGGATGGGTGTGAAGGA
TGGAGAGGGCAGAACCAGAGCCGCCTCGACGGCCAGCCCCTACAACGCTGGCCGGCGCAGCGACGACGACCATGACGACG
GATTCGGTGGTGGCCGCAGGAAGAGGGGTAAGCGAGGAGGTGCGCGCAGAAGCTTCTGGCAGGGGGTGCGGGACCAGGCA
CAATGCAGGGATACTGCTGCCTATGCTCCGGCTCCCCGTGGCCGGCGCCGCCATGTTGAGGGCATGGCTCCTTCCCAGGT
CGCCATTTGTCTCCCGTTAGAGGTACGGCCCCAGGCCCCGGCTGATTCCCAACGCCGGCAAAGCCCGGCAGCACAAGACA
AGGTGTATGTCACCCCATCGCTGCAGGTGGTCCAGGGAGAGCGCGGCTCCGGTTCTAGGGAACAGGCCGACCACCAGCAG
CTCACAGATGAGGAGATCAATGACGCAGAGCAGCCAAACCCTGACCAGCAGCAACGCTCGGATGAGGAGCTCAGTGACGC
CCATAGTCTGCCTGCTTTGTCGGCTGGACAGGTTTTGCCACCTCAGGAGCTCATGGACCGTGCACGGAGGCTCTCTGTCC
TTGTGATGGAGAAGGAGGCTGGGGGCATGCAAGACTGGGGCCTTGCACCCACCCCTGGTGGTCTGATGCAGCTCTTCTCC
CCACCCCGGCAGAAGCAGCTCGCCCCTTGGGCCAGCAATGTGGTTACTGATGCAGCCTCCATTACCGCAGCGGGGGTGAC
ATCCTTCTTCCAGCAACGTACCAGCTATGAGTTGCCTCCCCTCCCGCCTTCTTTGGACGTTTGCAACCTCTCTGCATGGG
ATCTGCCTCCCCCAGGGACGCCAGCGATGGCCTGGGACCTACCTGTTTTTTCCCAGAATCCGTGCTGGCTACCAAGCTGG
GCAGAGATGCCTATGACGAACCCAAGCTGGGCCTCTGGACCTGAGGTGGTGTTAGGGCCAGGGATTCAGGCTTCACAGCA
GGACCATCCCCCTCCTGGACTAGACTGCGCTGATAGACACAGGGATGCAAGATCATTTGTCCAACAATCCATCGAGGAGT
AGCGAGCGAGACGAGCACTGGCGGAGGCAAACCTCTCTGGTCCAGGCTTGGTTTCAGCGATCACGGCAAGGGTGGCTGCC
TTACACCTGGATGAGCAGAGGCAGTTCATTGGAAAAATTGCTACCCTCTCGTCCTCCTCCATCCTAGGCCCCCCTCCAGT
TTCTGCTCCCTCACCTCGCAAGCTAAAGAACCGCCTACTGGGGGTGGTCAGGGCCTCGCGGCAGAGTTCCAGGCTCCAGA
GGATGAACTCCACCCTATCTTCTTCAAGAAGGTCCCAAGCAACGATCAGCGTCAAGCTAGGTTTCATCAAACGCCCTGAA
GATTTCAACGATGACACTCTACTGGCGTACCTTCAGTTCTTCCGCGCGCCCATGCCACCGGAGAACGTCACCAAGCTGGC
GGAGATCGCCGGCCTGACGTCCCCATCTCAGCTACAGCTTCCGGACGTCGAGCTGCAAGCGATCCTGGAGGAGCTCGCAG
GCCAGGCTGCTTGAACTTCCTTCGTTTGACCATGCCTGCGCTGTCGCATCTTAGTTTCCAATGATTTGTTGTCCTTTGAA
CCTTAAGTTTACTGTTGGGCGCCGTCGGGCTGCCATGTATCCTGTTTGCCTGGGTTTCACCCACCCAGGCTTGATCTTGT
GCACCTTTGTGTTTTCTTATGATTAGTTCTCTATCCATTGCTAGCTGGAATGTGCGGGGGTTGAATAATAGGGCGAGGCA
GGCTGCGGTACGCGCCTTACTTGATCAGCTCTCTTGCTCGATCGTCTGTCTGCAGGAATCAAAGCTTGACCAGGCTGCTG
ATGCTGACATCACTGAAATAGCCGGGCCTGTGTTTGATAAGCATGTCATGCTTCCAGCCGACGTCACTCGTGGTGGAGTG
CTGCTCTGTTGGCGCTCGGACCACTTCTGTGTGTCTGCTGCCGATGTGCGCAGGTTCTCGATAACAGCCACGTTCACTCC
AACTGGAGCCCAGGGACATACGGCGTCTTGGACGCTAACCAC
>chr5D_1
CGCACGCGGCCGCATGTGGCCGTCGCGCCGCCGGCACGCGCCCGCGCACCCTGGC------GCCGGGGCCCCGCGCGCGC
CACCTCCGCGCCACATCGGCGTTCGGCCGCCTGATTAGCGCGCGCCGCCGTGTGTAGCGCACGCGGTTGTAGTGGAAGGG
CTTTTCGGCATAGGTTTATGCACACCACCTGTGGACCAGCGCCAGCGCCGGCAACGCCTAACCCGAGGTAGTGCCTGTAT
CACTATGTGTGTGCACCTTTGGCTGC----ACAAACAGCAGCCGGGTGCAGAGGTA---TCTAGGCC-----CAAAATCT
AGGTCATGTTATTTTTGTGCCACGTGTACTGAAGCCAATGGAGCAGTGCTAGCT--------TTCCGTGCTCGGCTGGTA
GCACGGACGGGACGGGCAGCGCTGA---CCCCGGGCCGAGTCGTGTCGTGTGTACGCGCCACCTTTCCC-TTCCCTTTCT
GCTTTTGCAGGTCCGCCACCGCAGGA-GG-----AGGGATCCGCGCGTTCGTGGAATCAAATCCGGCA-GG-----GGCG
TCGCCCAGCCACCCGTCGCGGGTCGTAGACTCGTAGCTCTCCATCCTCCACTGTC----ACCAACCAGC-----------
CTTTCTCCTCCCGCGCGAGCGAGACAAACGCCAAACGGCTAGCCTTCGGTCGCGTCGCCGTCCGGCGGTGGCGCCAC-CC
CTCCGTTGCGTTCTGCGATTCGGAGGAGGTCACTGGCCAGA---ACCGCGG----AAGTGCGGATTTCAATTACTGGCTC
AACTCTCTCTCGGAGACGCATGCAAAACGATATCTGTCGTGGATTGGGGAATGGATGGGGTGCGCGCGCTCT-------A
GTGCTGCACCTCGATTGGAAAATGATGGCTATTCTGTTTAGCGCTCGCTTTCACCAGCTGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTAGAAAACACAGGCGAACCATTCAAAGTCTTGTTCTTAGACATATATACAGG-------------
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>chr5A_7
CGC------CCGCGTGTGGCCGTCGCGCCGCCGGCACGCGCCCGCGCACCCTGTCGCCGGGGCGGGGGCCCCGCGCGCGC
CACCTCGCCGCCACATCGGCGTTCGGCCGCCTGATTAGCGCGCGCCGCCGTGTGTGGCGCGCGCGGTTGTAGTGGAAGGG
CTTTTCGGCATAGGTTTATGCACACCACCCGTGGGCCAGCGCCAGCGCCGGCAACGCCTACCCCGAGGTAGTGCCGGTAT
CACTATGTGTGTGCACCTTTGGCTGCACAAACAAACAGCAGCCGAGTGCAGAGGTAGTATCTAGGGC-----CTAGATCC
GGGTCATGCTA-TTTTGTACCACGTGTGCTGGAGCCAATGGAGCA--------------------------------GTA
GCACGGACGGGACGGGCAGCGCTGA---CCCCGGGGCGAGTCGTGTCGTGTGTACGCGCCACCTTTCGCTTTCCCTTTCC
GCTTTCGCAGGTCCGCCACCGCAGGA-GGGAGGCAGGGATCCGCGCGTTCGTGGAATCAAATCCGGCCGGGCCGTTGGCG
TCGCCCAGCCACCCGTCGCGGGGCGTAGACTCGTAGCTCTCCATCCCGCACTGTCTGTCACCAACCGGCGTTCTCTTTCT
CTTTCTCCTCCCGCGCGAGCGAGACAAACA-------GCTAGCCTTCGGTCGCGTCGCCGTCCGGCGGTGGCGCCACCCC
-TCCGTTGCGTTCTGCGATT-GGAGGAGGTCGGAAGCGTGGATGACCGCGGAAGCAAGCGCGGATTTTAATCACTGATCC
AATTTTCTCTCGGAGACGCAGGCAAAACGATATATGTCGTGGA---GGGAATGGAT------CGCGCGCTCT-------A
GTGCTGCACCTTCAGCGGGAAATGAT-GCTATTCTGTTTAGCGCTCGCTTTCACCAAGCT--------------------
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>chr5A_976
GACCGCTCGGC---------------------------------------------------------------------
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----------CATCACGCCGGACATGATTGCTCGTGTGGTGGCGCATGAGCATCGGTTCGACCTCCGGGACATTTCCGTC
GCGCCGTGCTTCCCTGAAGACTACATCATCACCCTGGCTGACCGTGTCCAGCGCGACCTGGTCTATGAAGGGCGTGTGAT
CGAGGTGGCGGGGGTCCGTTTTCAGCTCCGGCCATGGTTCCCGCCGGTGGGCGGCAACAAGGTATGGAGGTTCTACTGCA
GAGTAGTGATTGATCGTTTGCCGTTGAATGCTTGGGATTAGGACACCGTCCAGGAAGTGGTTGGGAAGAACTGCTGGCTT
GATTTGATTGAGCGGCAGTCCAAGACCAAGAGGAACAGATCTGCTCTCTTTGCTTGGGTATGGACATGGAACCCGGACAT
GATACCAAGGGCGTCTGATTTCAACATGCTGCAGCGGCAAGATGTGATCAGGTCCAGAGAGTCGAGGCCGGAAGGAGTGC
CGGTGGAGGAGGGCTTGGAGGGGCCGGACTTCCTGGTGCTCATCCACCTTGGTGTGGTTAAGGATTACACTCCCCTGTCT
CCTTCGGCGAGCCCAGATAATGGAGTGTGTGAGTGGCCTCGCACGTACAATCACAAGGGGTGGAGAATGGGTGTCAAGGA
TGGGGAGGGCCATCCCCGAGCTGCTCCTTCTGCTGGCTTGTTTCGTGCGGACCGGCGAGATGATGATGGCCACGATGATG
GAAATGGAGGAGGCTTCAGGAAGCGGGGGAAGATAGGAGGTGTTCGCCGGAGTTTTTGGCAGGGGGTGCGTGATCAGGCA
GGCTGCAGGGAGACTTCGGCGTACGCCCCGGCGCCTCG---CCGGCACCGCC----------------------------
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>chr2D_979
CTGCC--CGGC---------------------------------------------------------------------
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----------CATCACGCCGGACATGATTGCTCGTGTGGTGGCGCATGAGCATCGGTTCGACCTCCGGGACATCTCCGTC
GCGCTGTGCTTCCCTGAAGACTACATCATCACCCTGGCTGACCGTGTCCAGCGCGACCTGGTCTATGAAGGGCGTGTGAT
CGAGGTGGCGGGGGTCCGTTTTCAGCTCCGGCCATGGCTTCCGCCGCCGGGCGGCAACAAGGTATGAAGGTTCTACTGCA
GAGTAGTGATTGATCGTTTGCCGCTGAATGCCTGGGATTGGGACACCGTCCAGGAAGTGGTTGGGAAGAACTGTTGGCTT
GATCTGATTGAGCGGCAGTCCAAGACCAAGAGGAACAGATCTGCTCTCTTTGCTTGGGTATGGACATGGAACCCGGACAT
GATACCAAGGGCGTCTGATTTCAACGTGCTGCAGCGGCCAGATGTGGTCAGGTCCAGAGACTCGAGGCCGGAAGGAGTGC
CGGTGGAGGAGGGCTTGGAGGGGCCGGACTTCCCGGTGCTCATCCACCTTGTTGTGGTTAAGGATTACACTCCCCTGTCT
CCTTCGGCGAGCCCAGATAATGGAGTGTGTGAGTGGCCTCGCACGTATAATCACAAGTGGTGGAGAATGGGTGTCAAGGA
TGGGGAGGGCCGTACCCGAGC-----------------------------------------------------------
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>chr1B_1326
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----------------------------AGAGGAACATGTCAGCGCTGTTTGCTTGGCTCTGGACATGGAATCCGGATCA
GATTCCCCGAGCCTCAGACTTCAATGTGATCCATCGTCCTGATATTGTTTGCCCACGGGACTCGTTGCCGGAGGGGGTGC
CGGCGGAGGAGGGGAAGGAAGGCCCCCACTTCCCGGTCCTCATCCACTTGGACGTCGTCAAGGATTACACGCCACTGCCA
CCATCCGCGAGCCCAGCCGAG---------GAATGGCCTCGCACATACACACACAAGGGCTGGAGGATGGGTGTGAAGGA
TGGAGAGGGCAGAACCAGAGCTGCCTCGACGGCCAGCCCCTACAACGCTGGCCGGCGCAGCGACGACGACCATGACGACG
GATTCGGTGGTGGCCGCAGGAAGAGGGGTAAGCGAGGAGGTGCGCGCAGAAGCTTCTGGCAGGGGGTGCGGGACCAGGCA
CAATGCAGGGATACTGCTGCCTATGATCCGGCTCCCCGTGGCCGGCGCCGCCATGTTGAGGGCATGGCTCCTTCCCAGGT
CGCCATTTGTCTCCCGTTAGAGGTGCGGACCCAGGCCCCGGCTGATTCCCAACGCCGGCAAAGCCCGACAGCACAAGACA
GGGTGTATGTCACCCCATCGCTGCAGGTGGTCCAGGGAGAGCGCGGCTCCGGTTCTAGGGAACAGGCCGACCAGCAGCAG
CTCACAGATGAGGAGATCAATGACGCAGAGCAGCCAAACCCTGACCAGCAGCAACGCTCGGATGAGGAGCTCAGTGACGC
CCATAGTCTGCCTGCTTTGTCGGCTGGACAGGTTTTGCCACCTCAGGAGCTCACGGACCGTGCACGGAGGCTCTTTGTCC
TTGTGATGGAGAAGGAGGCTGGGGGCATACAAGACTGGGGCCTTGCACCCACCCCTGGTGGTCTGATGCAGCTCTTCTCC
CCACCCCGGCAGAAGCAGCTCGCCCCTTGGGCCAGCAATGTGGTTACTGATGCAGCCTCCATTACCGCAGCGGGGGTGAC
CTCCTTCTTCCAGCAACGTACCAGCTATGAGTTGCCTCCCATCCCGCCTTCTTTGGACGTTTGCAACCTCTCTGCATGGG
ATCTGCCTCCCCCAGGGCCGCCAGCGATGGCCTGGGACCTGCCTATTTTTTCCCAGAATCCGTGCTGGCTACCAAGCTGG
GCAGAGATGCCTATGACGAACCCAAGCTGGGCCTCTGGACCTGAGGTGGTGTTTGGGCCAGGGATTCAGGCTTCACAGCA
GGACCATCCCCCTCCTGGACTGGACTGCGCTGATAGACACAGGGATGCGGGATCATTTGGCCAACAATCCATCGAGGAGC
AGCGAGCGAGACGAGCACTGGCGGAGGCAAACCTCTCTGGTCCAGGCTTGGTTTCAGCGATCACGGCAAGGATGGCTGCC
TTACACCTGGATGAGCAGAGGCAGTTCATTGGAAAAATTGCTGCCCTCTTGTCCTCCTCCATCCTAGGCCCCCCTCCAGT
TTCTGCTCCCTCACCTCGCAAGCTGAAGAACCGCCTACTGGGGGTGGTCAGGGCCTCGCGGCAGAGTTCCAGGCTCCAGA
GGATGAACTCCACCCTATCTTCTTCAAGAAGGTCCCAAGCAACGATCAGCGTCAAGCTGGGTTTCATCGAACGCCCTGAA
GATTTCAACGATGACACTCTACTGGCGTACCTTCAGTTCTTCCGCGCGCCCATGCCACCAGAGAACGTCACCAAGCTGGC
GGAGATCGCCGGCTTGACGTCCCCATCTCAGCTACAGCTTCCGGACGCCGAGCTGCAAGCGATCCTGGAGGAGCTCGCAG
GCCAGGCTGCTTGAACTTCCTTCGTTTGACCATGCTTGCGCTGTCGCATCTTAGTTTCCAATGATTTGTTGTCCTCTGAA
CCTTAAGTTTACTGTTGGGTGCCGTCGGGCTGCCATGTATCCTGCTTGATCTTGTGG-----------------------
--ACCTTTGTGTTTTCTTATGATTAGTTCTCTATCCATTGCTAGCTGGAATGTGCGGGGGTTGAATAATAGGGCGAGGCG
GGCTGCGGTACGCGCCTTACTTGATCAGCTCTCTTGCTCGATCGTCTGTCTGCAGGAATCAAAGCTTGACCAGGCTGCTG
ATGCTGACATCACTGAAATAGCCGGGCCTGTGTTTGATAAGCATGTCATGCTTCCAGCCGACGTCACTCGTGGTGGAGTG
CTGCTCTGTTGGCGCTCGGACCGCTTCTGTGTGTCTGCTGCCGATGTGCGCAGGTTCTCGATAACAGCCACGTTCACTCC
AACTGGAGCCCAGGGACATACGGCGTCTTGGACGCTAACCAC
>SNPs
-------------------------------------------------S-----------------S-----S------
--------------------------------------------------------------------S---------S-
------S-------------------------------------S-------S------S--------------------
-------------------------------------------------------------------SSSSS--------
------------------------------S------------------SS-SSSSSSSSSS------------------
-------------------------SSS--S-------------------------------------------------
--------------------------S---------------------------------------S-------------
----------------------S--------------------S------------------------------------
--------------S-----------------------------------------------------------------
-------------S-------------S--S----S---S------S--------------------------------S
-------S---------------S-----S---S------------------------------S-S--S-SSSSSSSS-
-S----------S------------------------------------------S----SSSSSSSSSSSSSSSSSSSS
SSSS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------SSSSSSSSSSSSS
SSSSSSSSSS------S---------S-S-SS--S-------S--S---S--S--S---SSSSS-S-S---SS-SSS---
-----S--S--------S--S-S----------S----S--S-----------------------------S--SS-S--
------S--S-----SSSS-----------S--S--------------------SS-------S---------------S
-S--S-SS--S--S---S---------------------------SS--------S---S----------S--------S
--S--S--S-----S-----S-SS-S------------------------------------------------------
-------------------------S-----------------------S------------------------------
--------------------------------------------------------------------------------
---------------S-------------------------------------------S--------------------
---------------------S----------------------------------------------------------
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------------------------S---S--------------------------------------S------------
S------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------S-----
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
S---------------------------------------S---------------------------------------
-----------------S----------------------S---S-----------------------------------
-----------------------------------------------------S--------------------------
---------------------S--------------------------SS---------S-------------------S
-----------------------------------------------------------------------S--------
------------------------------------------S------S------------------------------
------------------------S-------------------------------------------------------
----------------------------------------------------------S---------S-----------
-----------------------------------------------------------S--------------------
-------------S---------------------------------S--------------------------------
-----------------------------------S---------------------------------------S----
-------------------S------------------------S---SSSSS--SSSSSSSSSSSSSSSSSSSSSSSSS
SS-----------------------------------------------------------------------------S
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----------------------S---------------------------------------------------------
------------------------------------------
>forward_962
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--------------------------------------------------------------ACGGCGAACCCTTCCTTT
TT------------------------------------------------------------------------------
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>reverse_2902
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---------------------AGACTGCGCTGATAGACACAG--------------------------------------
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>forward_1566
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--------------------------AATGCCTGGGATTGGGACAG----------------------------------
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>reverse_3340
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-----------------------------------------------------------GGAGAACGTCACCAAGCTGG-
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