>input_sequence_46124
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---------------------------------------------------------ATGGTGAAGATCGCCGCCCTCGC
CTTGCTCGCGTTGCTGGGATCCGTGGCGTGCCAAGGTGACAATGGCTCGCCTGCGGAGTCACCGGCGTATT---------
------------CTGCAAGCTCGGCCCCGGCGAGCTTGAAGGCGATCAGTTATCCTCCAGGTGCCAGCCCCAGCCAACCC
ATGCCGAGCCCGATTGTGTT------GAGCCCGAGCCCGCTCGCTCAGCCTCCTAGTCCTAGCGTCGACCTAGGCGCACC
GAGCCGAAGCCCGCCGGTATATCCACCGAGTGTCAGCCAACCCGCTCTTCCTCCGTCTGCTTCTTCCAGTGCCCCGAGCG
CAAGCTCACCGGAGTACCTTCCTAGCCCTAGTCCAAGCGTGTCTGGTCAAACCCCACCCACATATTCACCTGACCCAAGT
CCACCTAGTCATCCTCCTACCATTAGTCCAAGCCCATTGAGCCCGAGCACTACTATTGCTTATCCACCGAGCCCAAGCCC
TAGCCAACCCGCATATCTTCCTAGCCCAAGCCCGATCAATCCAAGGCAACCCAATCCTGCCAGCCCTAGCCCTAGTCCAG
CACCGTATATTTCAAGCCCTAGCCCAAGCCCAAGCCCAAGCCCGGATAGCCCTGCTCCAGCCCCTTATCCTCCCAGT---
AACTCTCCCAGCCCAAGCACTCCCGTTTCAGGGCTCAGTGTCGGTCACTACAGCTACTCCTGCCCAAATGCGGAGGCCAT
TGTCAGGGAGGCCGTGAAGAACGCCAGGGAGAAGAATCGCGGCACCGGCGCGGGGCTCATCCGTCTCTTCTTCCACGACT
GCTTCGTCCGGGTAAATAATCCAGACGCTCACATCTCTTCTAATTAGTCTGATCAATATTA-------AGCATTCCTCCA
TTCTTACGTGCTGTGCGTGACGTGATCGCTCAGGGGTGCGATGCTTCCGTTCTCCTCAACACGACCGGCTCCGGCGAGCC
---GACAGAGTTGAAGGGCCCGCCGAACAAGAC---CCTCCGAGGCTTCGAGGTCATCGACGCGGCAAAGGCGGCGCTCG
AGGAGGCCTGCCCCGGAGTTGTCTCTTGTGCGGACGTCCTCGCCTTCGCCGGCCGCGACGCCACCTTCTTCCTTACCAAC
CGCACGGCCGCCTACTTCCCGATGCCGGCCGGCCGCTACGACGGGCGCGTGTCTTTCGCCAACGAGACCACCCTCAACCT
GCCGTCGCCCACCTCCGGCCTCCAGCAGCTCAACAAGAGCTTCCACGCCAAGGGGCTGAGCCTCGAGGACATGGTCACCC
TTTCCGGCGCGCACTCCGTCGGCCGCTCCAGCTGCTCGTCCTTCCACGACCGCATCCCCCCCAACCCCTCCGACATGGAC
CCCGAGTTCGCGAGCTCCCTGCGGGAGCAGTGCAGCAGCAGCGACCCCTCGGCGATGCAGGACTTCAAGACCCCCGACGA
CCTGGACCGGCAGTACTACCAGAACGCCGTGGACCACAAGGTGCTGTTCACCTCCGACGCGGCGCTCATGGCGTCGAACG
AGACGGCGAGGATGGTGCTCGATAACGCTCATGTCAGTGGGCTGTGGGAGAAGAAGTTTGCGGCGGCGATGGTGAAGATG
GGCGGCGTCGGCGTCAAGACCAGCGCCAACGGCGAGATCAGGAAGAAATGCTGGATCGTCAACAAAGTGTGA--------
--------------------------------------------------------------------------------
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------------------------------------------
>chr2A_1_TraesCS2A01G148200
CAAATTCATTTAAGGTCACATTGCAAATCCATAACATTTTCATTTTAGTTTGCCGAGGACGACGGGGACGACAAAGTGGA
TCCCTGGCGAATCCTGCGCCACTGCGTCTGGTGGGTGCGTCAAACCCGCACTGCAGCTTGGTTTTATTTCACCTTTCCTT
TGTGCCTGGCATCACAATAGGTGGCACGACATACACATCTTACTCATCTTTGGGCAGTACGCCTGGATGCATACACGAGT
GTGGTAGTACAAGAAGATGAAAACAGGGGCAAGAAACAGAGACGAAGGCGGGCTGCACCACCAGCACTGTCACCATCGCA
GGCCAAAACTACGCTAAGCTAATTAAGCAACTGGCCGCTGATATAGCTAGCATAGGCAAAAGCCAACACCATGACATTTG
GAGCCGCTACAATTCAACAACCTTA-CCCCCCACCAAAAAACAACAAAAACAACAACAGC-AGCTTGCTGGCTGTGCGAT
GCACTTGTTTAC------ACACCGACACCGACACCGATCAATGCATCCATTTTAGTATCAAATTTTCTACTTGAATCAAT
GAGGAAGCAACCTTGGCCGGTTGTCATCAACCAGTTTTGTACGCGGCGTGTATTACACACTTACAACCATCCTAGTTTTG
TACATGCGTCCCGCGTTACAGCTGCAGAACAGAAGAACGATGATTATTCCCCATCTAGTTTCCTCCGCAAATGATTGCGT
GCCAGTCGGCATAGCGGAGCAATTAGGCAACTAGACGTGTCAGCGTCAATTGATTGAGCTGGGAACTACT-----CGGTG
CCGCTGCCATGTTCCGGCCCTTGACTTCACAACCTTCGCCACGTGAGGCTTCCCCGGATTGCCCGGAGACATTCCGCGTA
CATTCCTCGTCTCCTCCGGCGCTCCTGAGCTATATGTAGGACGGTCGTAGCTCTTCGCCCTTAGTCCAGCCACACAA--G
TTGTTGCAGATAGCGAACACAGTTACGAACAGCAGTAGAGATAGCAGTAGCTGAG--ATGGTGAAGATCGCCGCCCTCGC
CTTGCTCGCGTTGCTGGGATCCGTGGCGTGCCAAGGTGACAATGGCTCGCCTGCGGAGTCACCGGCGTATT---------
------------CTGCAAGCTCGGCCCCGGCGAGCTTGAAGGCGATCAGTTATCCTCCAGGTGCCAGCCCCAGCCAACCC
ATGCCGAGCCCGATTGTGTT------GAGCCCGAGCCCGCTCGCTCAGCCTCCTAGTCCTAGCGTCGACCTAGGCGCACC
GAGCCGAAGCCCGCCGGTATATCCACCGAGTGTCAGCCAACCCGCTCTTCCTCCGTCTGCTTCTTCCAGTGCCCCGAGCG
CAAGCTCACCGGAGTACCTTCCTAGCCCTAGTCCAAGCGTGTCTGGTCAAACCCCACCCACATATTCACCTGACCCAAGT
CCACCTAGTCATCCTCCTACCATTAGTCCAAGCCCATTGAGCCCGAGCACTACTATTGCTTATCCACCGAGCCCAAGCCC
TAGCCAACCCGCATATCTTCCTAGCCCAAGCCCGATCAATCCAAGGCAACCCAATCCTGCCAGCCCTAGCCCTAGTCCAG
CACCGTATATTTCAAGCCCTAGCCCAAGCCCAAGCCCAAGCCCGGATAGCCCTGCTCCAGCCCCTTATCCTCCCAGT---
AACTCTCCCAGCCCAAGCACTCCCGTTTCAGGGCTCAGTGTCGGTCACTACAGCTACTCCTGCCCAAATGCGGAGGCCAT
TGTCAGGGAGGCCGTGAAGAACGCCAGGGAGAAGAATCGCGGCACCGGCGCGGGGCTCATCCGTCTCTTCTTCCACGACT
GCTTCGTCCGGGTAAATAATCCAGACGCTCACATCTCTTCTAATTAGTCTGATCAATATTA-------AGCATTCCTCCA
TTCTTACGTGCTGTGCGTGACGTGATCGCTCAGGGGTGCGATGCTTCCGTTCTCCTCAACACGACCGGCTCCGGCGAGCC
---GACAGAGTTGAAGGGCCCGCCGAACAAGAC---CCTCCGAGGCTTCGAGGTCATCGACGCGGCAAAGGCGGCGCTCG
AGGAGGCCTGCCCCGGAGTTGTCTCTTGTGCGGACGTCCTCGCCTTCGCCGGCCGCGACGCCACCTTCTTCCTTACCAAC
CGCACGGCCGCCTACTTCCCGATGCCGGCCGGCCGCTACGACGGGCGCGTGTCTTTCGCCAACGAGACCACCCTCAACCT
GCCGTCGCCCACCTCCGGCCTCCAGCAGCTCAACAAGAGCTTCCACGCCAAGGGGCTGAGCCTCGAGGACATGGTCACCC
TTTCCGGCGCGCACTCCGTCGGCCGCTCCAGCTGCTCGTCCTTCCACGACCGCATCCCCCCCAACCCCTCCGACATGGAC
CCCGAGTTCGCGAGCTCCCTGCGGGAGCAGTGCAGCAGCAGCGACCCCTCGGCGATGCAGGACTTCAAGACCCCCGACGA
CCTGGACCGGCAGTACTACCAGAACGCCGTGGACCACAAGGTGCTGTTCACCTCCGACGCGGCGCTCATGGCGTCGAACG
AGACGGCGAGGATGGTGCTCGATAACGCTCATGTCAGTGGGCTGTGGGAGAAGAAGTTTGCGGCGGCGATGGTGAAGATG
GGCGGCGTCGGCGTCAAGACCAGCGCCAACGGCGAGATCAGGAAGAAATGCTGGATCGTCAACAAAGTGTGACGTGTCGA
TCGATCAGGTGGTTCATCGTAAGAAGGTCTCATGAATTGTTCGATGCCACATTCGGCACATGCACGCCGTT-GGTGATGA
TT--TTTTTCC-GGTTTATTTTTTTCAGACTAG----GACATGCAAAATGTAGTAC--ATCTGTTTGGAATTCTTTTGGC
GTATATATGGAGTGAGAAACTTGGAACTACAAAATACATTTACACCAAGTATATAGGTTC--------------------
--------------------------------------------------------------------------------
---------------------------------------------TATTGGTTCTAGCGGCAAAGCAGACCATAATATTC
CAACCTTGTTTGTCTTTGTGAATACGGAGTATCATTT-GAATACTTAGGTAGAGACTGAAACTTGGACGCGGACTTCTGA
AACATGGTTTCCTGGAAGCCCCCATTATGAATAGTAAATTCTAAAAATATA---AAAAATAAAATAAATCTGATC--TTT
TTTACCATATATAGTCGACCGGTATACTTGGGTATGAAGTTTTATGAAGAAATGTCATCATGATATTCTGCACAAAAATG
ACAAAACTGATGTTGAACAAATACTGTTTGAATGAATAGTAATATC-----TGTATTTTCTTCACTAAAAATACAATGGG
TGTCATTCCTTCATGTAACTTCTCACGCGAGTAGAATGGTCAGCCTAGTTTGATACCCCATAATTCAAATATGAATTTCT
CTAATA-TTTTTCTAGATTTTACTATTCACATGGGTGCAAATGAAACCATGTTCACCTCAATGTATT-TTGAAATACTCG
GTTTTAGTACTTTCAAGTTTGCAATCATTTCTCCAAAAAAAACATTTT-TAAAACCATGTAGGAGAGCTGCATGTGATTA
CCATAGAAG-AAAAAAATGTGACAAAGTTTTTAAGAGCAACACAACAAAGAACCCACACATAGAAAGGCAGTCAGATCCA
ATAGCTGCCCTGTTTTAGGGAAGCAAAAAGTGCTTCACGTAAAATATAGAGCACAAAAAAAGTGCTTTTTAAGGCATGAC
AAATTGAGCGTCTCCAACAGCTGCCTTAAAATTGGGCACCAA
>chr2D_1
CAAATTCATTTAAGGTCACATTGCTAATCCATAACATTTTCATTTTAGTTTGCCGAGGACGACGGGGACGACAAAGTGGA
TCCCTGCCTTTATGATGCAGTGCA-----------------------------------GGTTTCATTTCTCCCTTCCTT
TGTGTCTGACATCACAATAGGTGTCACGGCATACATATCTTACTCGTCTTTGGGCAGTACGCCTGGACGCGTACACGAGT
GTGGCAGTACAAGAAGATGAAAACAGGGGCAAGAAACAGAGACGAAGGCGGGCTGCACCACCAGCACTGTCACCATCTCA
GGCCAAAACTACGCTAAGCTAA----GCAACTGGCTGATA-------TAGCATAGCGAAAAGCCACTACTATGACATTTG
GAGCTGCTACAAGTCAGCAATCTTACCCCCCCACCAAAAAACAACAAAA-CAACAGCAGC-AGCTTGCTGGCTGTACAAT
GCACTTGTTTACACACCGACACCGACACCGACACCGATCAATGCATCCATTTTGATAGGGAATTTTCTACTTGAATCAAT
GCGAG-GAAACCTTGGCCGGTTGTCATCAACCAATTTTGTACGCGGCGTGTACTACACACTTGT-ACCATCCTAATTTTG
TACATGCGTCCCGCGTTACAGCTGCAGAACAGAG---CGATGATTATTCCCCATCTAGTTTTCTCCGCAGATGATTGCGT
GCCAGCCGGTATAGCGGAGCAATTAGGCAATTAGACGTGTCAGCGTCAATTGATTGAGCTGGGAACTACT-----CGGTG
CCGCTGCCATGTTCCGGCCCTTGACTTCACAACCTTCGCCACGTGAGGCTTCCCCGGATTGCGCGGAGACATTCCGCGTA
CATTCCTCGTCTCCTCCGGCGCTCCTGAGCAATATATAGGACGGTCGTAGCTCTTCGCCATTACTCCAAGCACACAA--G
TTGTTGCAGATAGCGAATACAGTTACAAGCAGCAGCAGAGATAGCAGTAGCGGAGAGATGGTCAAGCTCGCCGCCCTCGC
CTTGCTCGCGTTGCTGGGGTCCGTGGCGTGTCAAGGTGACAATGGCTCACCTGCGGAGTCACCGGCGTATT---------
------------CTCCAAGCTCGGCCCCGGCGAGCTTGAAGACAATCAGTTACCCTCCGGCTGCGAGCCCCAGCCAGCCC
ATGCCGAGCCCAGTTGTGTT------GAGCCCGAGCCCGCTCGCTCAGCCTCCTAGTCCTAGCATCGACCTAGGCGCACC
GAGCCAAAGCCCGCCGGTATATCCACCGAGTGTGAGCCAACCCGCTCTTCCTCCGTCTGGTTCTTCCAGTGCCACGAGCG
CAAGCTCACCGGAGTACCTTCCTAGCCCTAGCCCAAGCGTGTCTACTCAAACCCCACCCACATATTCACCTGACCCAAGT
CCACCTACTAATTCAAC------TAGCCCAAGCCCTTCGAGCCCAAGCACA---ATTGCTTATCCACCGAGCCCAAGCCC
TAGCCAATCCACATATCCTCCTAGCCCAAGCCCGATCAATACAAGACAACCCAATCCT------CCCAGCCCAGATCCAG
CATCTTATATTCCAAGCCCTAGCCCTAGCCCTAGCCCAAGCCCGGATAGCCCTGCTCCAGCCCCTTATCCTCCTATCTCA
AACTCACCCAGCCCT---------------GGGCTCAGTGTCGGTCACTACAGCTACTCCTGCCCAAATGCGGAGGCTAT
TGTCAGGGATGCCGTGAAGAACGCCACGGAGAAGAATCGCGGCACCGGCGCCGGGCTCATCCGCCTCTTCTTCCACGACT
GCTTCGTGCGGGTAAATAATCCAGACGCTCACATCGCTTCTATTTAGTCTGATCAATACTC-TTAATTAGCATTCCTCCA
TTCTTACATGCTGTGCGTGGCGTGATGGTTCAGGGGTGTGATGCTTCTGTTCTCCTCAACACGACCGGCTCCGGCGAACC
---CACAGAGTTGAAGGGCCCGCCGAACCTGAC---CCTCCGCGGCTTCGAGGTCATCGACGCGGCAAAGGCAGCGCTCG
AGGAGGCCTGCCCCGGCGTTGTCTCGTGCGCGGACGTCCTCGCTTTCGCCGGCCGCGACGCCACCTTCTTCCTCACCAAC
CGCACGGCCGCCTACTTCCCCATGCCGGCCGGCCGCTACGACGGGCGCGTGTCTTTCGCCAACGAGACCACCCTCAACCT
GCCGTCGCCCTCCTCAGGCCTCCAGCAGCTCAACCATAGCTTCCACGCCAAGGGGCTGAGTCTCGAGGACATGGTCACCC
TTTCCGGCGCGCACTCCGTCGGCCGCTCCAGCTGCTCGTCCTTCCACGGCCGCCTCTCCCCCAACTCCTCCGACATGGAC
CCCGAGTTCGCGAGCTCCCTGCGGAAGCAATGCAGCAGCAGCGACCCCACGGCGATGCAGGACTTCAAGACCCCCGACGA
CCTGGACCGGCAGTACTACCAGAACGCCGTGGACCACAAGGTGCTGTTCACCTCCGACGCGGCGCTCATGGCGTCGAACG
AGACGGCGAGGATGGTGCTCGATAACGCGCATGTCAGTGGGTTGTGGGAGAAGAAGTTTGCGGCGGCGATGGTAAAGATG
GGCGGCGTCGGGGTCAAGACCAGCGCCGACGGCGAGATCAGGAAGAAATGCTGGATCATCAACAAAGTGTGACGTGTCGA
TCGATCAGGTGGTTCATCGTAAGACGGTCTCATTAATTGTTCGATGCCACATTCGGCACATGCATGCCGTT-GGTGATGA
TT--TTTTTTCTGGTTTATTTTTTTCAGACTAG----GACATGCAAAATATAGTAC--TTCTGTTTGGAATTCTTTTGGC
GTATATATGGAGTGAGAAACTTGGAACTACAAAATAT-TTTACACGAAGTATAT--------------------------
--------------------------------------------------------------------------------
------------------TTGGTTCTATTCCCGCAAAAAAA-GTATATTGGTTCTAGCGGCAAAGCAAACCATAATATTC
CAACCTTGTTTGTCTTTGTGAATATGGAGTATCATTTTGAACACTTAGGTAAAGACTGAAACTTGGACGCCGACTTTTGG
AAAATGGTTTCACCAAAACCCCAGTCATGAATAGTAAATTCTAAAAATATCATGAAAAATAAAATAAATCCGATTTATTT
TTTACCATATATAGTCGACCGGTATACTCCTGTATGAAGTTTTATGAAGAAATGCCATCATGATATTCTGCGCAAAAATG
ACAAAAGTGATGTTAAACAAACACTGTTTAAATGAATAGTAAGATCTCAATTGTATTTTCTTCACTAAAAATACAATGGG
TGTCATTCCTTAATCAAACTTCACAAGTGAGTAGAATGGTCAGCCTAGTTTGATACCACAAAATCCAAAAAACATATATG
G----ATTTTTTCTATATTTTACTATTCACATGGGCGCAAATGAAACCATGTTCACCTCAATGTATCTTTGAAATACTCG
GTTTTAG--------------CAATCGTTTCTA-AAAAAAAACATTTT-TTCAACCATGTAGGAGAGCTGCATGTGTTTA
CCATAGAAGAAAAAAAATGCGACAAAGGTTTTAAGAGCAACACAACAAAGAACCCACACATAGAAAGGCAGACACATCCA
ATGGCTGCCCTATTTTAGGCAAGCAAAAAGTGCTTGACGTACAATATATAGCACAAAAGT-TAA-TTCTTAAGGCATGAA
AAATTGAGCGTCTCCAACAACTGCCTTAAAATTGGGCAC---
>chr2B_102
--------------------------------------------------------------------------------
---------------------CTGCGTCTCGTGGGTGCAAACGT---GCACTGCAGCTTGGTTTTATTTCTCCGTTCCTT
TGTTTCTGGCATCACAATAGGTGGCACGACATACACATCTTACTCGTCTTTGGGCAGTACGCCTGGAGGCATACACGAGT
GTGGTAGTACAAGAAGATGAAAACAGGGGCAAGAAACAAAGAGGAAGGCGGGCCGCACCACCAGCACTGTCGCCATCGCA
GGTCAAAACTACGCTAAGCTAA----GCAACTGGCTGATA-------TAGCATAGGAAGAAAACCATACTAGGACATTTG
GAGCTGCTACAACTCAGCAATCCTA-CCCCCCACCGAAAAACAACAAAAACTACAACAGCTAGCTTGATTGCTGTACAAT
GCACTTGTTTACACACCGACACCGACACCGACACCGATCAATGCATCCATTTTAGTAGCGAATTTACTACTTGAATCAAT
GAGGAAGAAACCTTGGCCGGTTGTCATCAACCAATTTTGTACGCAGCGTGTACTACACACTTACAACCATCCTGATTTTG
TACATGCGTCCCGCGTTACAGCTACAGAACAGAA---GGATGATTATTCCCCATCTAGTTTTCTCCGCAAATGATTGCGT
GCCAGCCGGTATAGCGGAGCAATTAGGCAATTAGACGTGTCAGCGTCAATTGATTGAGCTGGGAACTACTCTACTCGGTG
CCGCTGTCATGTTCCGGCCCTTGACTTCACGCCCGGCACCACGTGAGGCTCCCCCGGAATGCGCGGAGACATTCCGCGTA
CATTCCTCGTCCCGTCCGGCGCTCCTGAGCTACATATAAGACGGTCGTAGCTCTTCGCCATTAGTCCAGCCACACAATAG
TTGTTGCAGATAGCGAATACAATCACGAACAGCGGCAGAGAT-----------AGAGATGGTCAAGCTCGCCGCCCTCGC
CTTGCTCGCGCTGCTGGGGTCCGTGGCGTGCCAAGGTGACAATGGTTCACCCGCGGACTCACCGGCGGCGTACCCGCCTA
GCCGAAGCGTGCCTCCAAGCTCGGCTCCGGCGAGCCCGAGCACTCCA------------GCTGCGAGCCCCAGCCAGCCC
ATGCCGAGCCCGATTGTGTTGAGCCCGAGCCCGACCCCGCTCGCTCAGCCTCCTAGCCGCGG------CCTAGGCGCACC
GAGCCAAAGCCCGCCGGTATATCCACCAAGCGTGAGCCAACCCGCCTTTCCTCCGTCTGGTTCTTCCAGTGCCCCGAGCG
CAAGCTCACCGGAGTACCTTCCTAGCCCTAGTCCAAGCGTGTCTAGTCAAACTCCACCCACATATTCACCTGACCCAAGT
CCACCTACTTCTC---C------TAGTCCAAGCCCGTTGAGCCCGAGCAAA---ATTGCCTATCCACCAAGCCCAAGCCC
TAGCCAACCCACATATCCTCCTAGCCCAAGCCCAATCAATCCAAGACAACC------T------CCCAGCCCAGGTCCAG
CATCTTATATTCCA------------AGCCCTAGCCCAAGCCCGGATAGCCCTGCTCCAGCCCCTTTTCCTCCTATCTCA
AACTCACCCAGCCCT---------------GGGCTCAGTGTCGGTCACTACAGCTACTCATGCCCAAATGCAGAAGCTAT
CGTCAGGGAGGCCGTGAAGAACGCCACGGAGAAGAATCGCGGCACCGGCGCCGGGCTCATCCGTCTCTTCTTCCACGACT
GCTTCGTCCGGGTAAATAATCCAGACGCTCACATCTCTTCTAGTTAGTCTGATCAATACTAATTAATTAGCATTCCTCCA
TTCTTACGTGCTGTGCGTGACATGATCGTTCAGGGGTGCGATGCTTCCGTTCTCCTCAACACGACCGGCTCCGGCGAACC
---CACAGAGTTAAAGGGCCTGCCGAACCTGAC---CCTCCGGGGCTTCGAGGTCATCGACGCGGCAAAGGCGGCGCTCG
AGGAGGCCTGCCCCGGCGTTGTCTCGTGTGCGGACGTCCTCGCCTTCGCTGGCCGCGACGCCACCTTCTTCCTCACCAAC
CGCACGGCGGCCTACTTCCCCATGCCGGCCGGCCGCTACGACGGGCGCGGGTCTTTCTCCAACGAGACCACCCTCAACCT
GCCGTCGCCCTCCTCCGGCCTCCAGCAGCTCAACGAGAGTTTCCACGCCAAGGGGCTGAGCCTCGAGGACATGGTCACCC
TTTCCGGCGCGCACTCGGTCGGCCGCTCTAGCTGCTCGTCCTTCCACGACCGCCTCTCCCCCAACTCCTCCGACATGGAC
CCCCAGTTCGCGAGCTCCCTGCGGAAGCAGTGCAGCGGCAGCGACCCCACCGCGATGCAGGACTTCAAGACCCCCGACGA
CCTGGACCGGCAGTACTACCAGAACGCCGTGGACCACAAGGTGTTGTTCACCTCCGACGCGGCGCTCATGGCGTCGAACG
AGACGGCGAAGATGATGCTCGATAACGCGCATGTCAGTGGGCTGTGGGAGAAGAAGTTTGCGGCGGCGATGGTAAAGATG
GGCGGCGTCGGGATCAAGACCAGCGTCGACGGCGAGATCAGGAAGAAATGCTGGATCATCAACAAAGTGTGACGTGTCGA
TCGATCACGTGGTTCATCGTAAGATGGTCTCATGAATTGATCGATGCCACATTCGGCACATGCATGCCGTTTGGTGATGA
TTTCTTTTTTCTGTTTTATTTTTTTTCAGACTAGGACGACATGCAAAATATAGTACACTTCTGTTCGGAATTCTTTTGAC
GTATATATGGAGTGAGAAACTTGGAACTACAAAATAT-TTTACACGAAGTACTCCCTCCGTCCGGAAATATTTATCATCA
AAATGGATAAAAAAAGGTGTATCTAGACGTATTTTAGTTCTAGATACATCTCTTTTTATCCATTTTGATGACAACTATTT
TCGGACGGAGGGAGTATATTGGTTCTATTCCCGCAAAAAAAAGTATATTTGTTCTAGCGGCAAAGCATACCATAATATTC
CAACCTTGTTTGTCTTTGTGAATATGGAGTATCATTTTGAACAGTTAGGCAGAGACTAAAACTTGGACGCGACCTTTTGG
AACATGGTTTCACCGAACCCCTAGTCATGAATAGTAAATTCTA-AAATATCATGAAAAATAAGATAAATCTGATTTTTTT
ACCAT-ATATATAGTTGACCGGTATACTCCTGTATGAAGTTTTATGAAGAAATGCCATCATGATATTCTGCGCAAAAATG
ACAAAACTGATGTTAAACAAACACTGTTTAAATGAATAGTAAGATCTCAATTGTATTTTCTTCACTAAAAATACAACGGG
TGTCATTCCTTAATCAAACTTCCCACATGAGTAGAATGGTCAGCCTAGTTCAATACCCCAGAATCCAAAAAATATATATG
G----A-TTTTTCTAGATTTTACTATTCACATGGGCGCAAATGAAACCATGTTCACCTCAATGTATC-TTGAAATACTCG
GTTTTAGTACTTTCAAGTTTGCAATCGTTTCTAAAAAAAATAAAAAAAATTCAACCATGTAGGAGAGCTGCATGTGATTA
CCATAGAAG-AAAAAAATGCGACAAAGGTTTTAGGAGCAACACAACAAAGAACCCACACATAGAAAGGCACTCAGATCCA
ATAGCTGCCCTATTTTAGGGAAGCAAAAAGTGCTTGACATAAAATATATAGCAGAAAAAAGTAA-TTTTTAAGCCATGAC
AAATTGAGCGTGTCCAACAG----------------------
>chr3D_1716
TCAA----------------------------------------------------------------------------
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------GGATGCCGTGAAGAAGGCCGTGGATGAGAACCCCGGCATTGGCGCGGGGCTCATCCGTCTCTTCTTCCACGACT
GCTTCGTTCGGGTACGTACATACAG----CTCGTCGATTCTAGCTTATACTATATATACTAACTGCACTGTCGTTTAACA
AGATCAACATGTTCATTATGATC-------CAGGGATGCGATGCTTCCGTCCTCCTCAACACGACCAACTCCCAGAACAG
CGACACGGAGAGGGAAGGCCTTCCCAACAAGGACAGCCTGCGAGGGTTCGAGGTGATCGACGAGGCCAAGACGGCGATCG
AGGCCGCCTGCAACAATACAGTCTCATGCGCAGACATTGTCGCCTTCGCCGCCCGCGACGCGTCCTACTTCCTCAGCAAC
GGCAGCATCAATATCCGGATGCCAGG---CGGCCGCTACGACGGGCGCGAGTCCTTCGCCAACGAGACCGA---CCAGCT
GCCCGGGCCCTTCTCCAACGTCGCGCAGCTCCAGGCGAGCTTCGCGGCCAAGGGGCTCACCTCCGACGAGATGGTCACGC
TCTCCGGCGCGCACACCATCGGCCGCGCCCGCTGC---------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>chr3D_1716
TCAA----------------------------------------------------------------------------
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------GGATGCCGTGAAGAAGGCCGTGGATGAGAACCCCGGCATTGGCGCGGGGCTCATCCGTCTCTTCTTCCACGACT
GCTTCGTTCGGGTACGTACATACAG----CTCGTCGATTCTAGCTTATACTATATATACTAACTGCACTGTCGTTTAACA
AGATCAACATGTTCATTATGATC-------CAGGGATGCGATGCTTCCGTCCTCCTCAACACGACCAACTCCCAGAACAG
CGACACGGAGAGGGAAGGCCTTCCCAACAAGGACAGCCTGCGAGGGTTCGAGGTGATCGACGAGGCCAAGACGGCGATCG
AGGCCGCCTGCAACAATACAGTCTCATGCGCAGACATTGTCGCCTTCGCCGCCCGCGACGCGTCCTACTTCCTCAGCAAC
GGCAGCATCAATATCCGGATGCCAGG---CGGCCGCTACGACGGGCGCGAGTCCTTCGCCAACGAGACCGA---CCAGCT
GCCCGGGCCCTTCTCCAACGTCGCGCAGCTCCAGGCGAGCTTCGCGGCCAAGGGGCTCACCTCCGACGAGATGGTCACGC
TCTCCGGCGCGCACACCATCGGCCGCGCCCGCTGC---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------
>SNPs
------------------------S-------------------------------------------------------
------S-SSSSSSSSSSSSS--------S--------SSSSSSSSS-----------------------S--S------
----S----------------------------------------S---------------------S------------
--------------------------------------------------------------------------------
----------------------SSSS---------S-S-SSSSSSSS---------S---------S--S----------
----S-------S---S---S------------------------------------------------------S-S--
---------------------------------------------------------S-S--------------------
-------S-------------------------S------------------S---------------------S-----
----------------------------------SSS------------------------S------------------
-----S---S--------------------S-------------------------------------------------
--------------------------------------------------------------S-----------------
-----------------------------------S-----------------------S--------------------
-----------------S-----------------S---------------S----------S---S-------------
------------------S-----------------------------S-------------------------------
--------------S--------------------------S-S--------S-----S-S---S-----------S---
---------------------------------------------------------------S----------------
-----S---------------------------S-------------------------S--------------------
--------------------------------------------S-----------------------------------
-------S-S----SS-SSSSSS------------S--------------SSSS--------------------------
----------S------S---------------------------S------------SSSSSS--S-----SS------
--S-S------S-------------S-----S-----------------------------------------S-SS---
-----S--------SSSSSSSSSSSSSSSS-----------------------------------------------S--
--------------------------S-----------------------------------------------------
------------------------------------------S---------------S---------------------
----------------------------S------------------------------------------------S--
---S----------------------------------------------------------------------------
----------------S--------S-----------------------------------------------S------
--------------------------------------------------------------------------------
----------S-----------------------S---------------------------------------------
-----------------------------------------------------S--S--------S--------------
------------------------S-----------------------S-------------------------------
--------------------------------------------------------------------------------
----------------------------S--------------------------------------------S------
-----------S---------------S-----------------------------S----------------------
------------------------S---------------------------------------S---------------
---------S---------------------------------------S--------S---------------------
------------------------------------SS-------S--------SSSSSS--------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------------------S----------------S----------------------------------S--S
-----------SSS---S----SS-S------------------------S-----------------------S-----
----------------------------SSS-----------------------S----------------S--------
--------------S------S-------S------------S-------------------------------------
-----------S--SS------S----S--------------------------------S---S----S-SS-SS-SSS
SSSSS------------------------------S------------------------------S-------------
--------------------------S-----SS----------------SS----------------------------
-------------------S-------S----------------------------------------------------
-----------S-----------------------S------------S-----------SSSSS---------------
---------------------------------------SSS
>forward_364
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------------------------AAGCAACTGGCCGCTGATAT------------------------------------
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>reverse_1676
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GTAAC
TCTCCCAGCCCAAGC-----------------------------------------------------------------
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>forward_1405
--------------------------------------------------------------------------------
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-------------------------CCCTAGTCCAAGCGTGTCTG-----------------------------------
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>reverse_2668
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AACGGCGAGATCAGGAAGAA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_1494
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CATTGAGCCCGAGCACTACT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_3463
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TCACGCGAGTAGAATGGTCAG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
