>input_sequence_46102
--------------------------------------------------------------------------------
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--------------------------------------------------------ATGTCGAAGCGCGGTGCGTGCAGC
CGCCTCTCTCCGCCCTCTTCGGAGGCTCCTGCGTCCGTTCGTGTATCTCGTTAATCTAGCCTAACACGCACTTGGTGGGA
AATTTTGCAGGGAGGGGAGGATCGGCGGGGAACAAGTTCCGGATGTCCCTGGGTCTGCCGGTGGCAGCGACGGTGAACTG
CGCCGACAACACGGGCGCCAAGAACCTGTACATCATCTCCGTGAAGGGCATCAAGGGAAGGCTCAACCGCCTGCCGTCGG
CCTGCGTCGGCGACATGGTCATGGCCACCGTCAAGAAGGGGAAGCCCGACCTCAGGAAGAAGGTCATGCCGGCGGTCATC
GTGCGCCAGCGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTCGAAGGTAACGATGATTCCCAGTGTTGTTT
TATGAGATCCTGTATTAGCTCTCATTAGAAGATCTGGATGCTTGTGATCTCGCACGGCTCCGCCTAGATTCACGCCAAAA
CAGTACAGCGCCGTGAAGAAACATCTTAAACGATGATAGGGTATCGACTCTCTTGATTTCTTTAGCAGACGGTGCATGCT
TT-TGAATGTTGCATGAAAACTGTCTTAAAACACACCTTTATACTGCTCATTTCTTTTATGACGTTGTCACTGTTGTGTA
TAGAGTT---GAGG-AGTATAATTAGAGTGCCTGACGTTCTTGAAGTATGCTGTTGTCAAAATTCCTCCATGTTAAAGTC
TGCCATTATTTGATTTAGCTATGTAGCTTTCATTGCTGCATTGGTAAATCAGATCTGTCAGGACGACATTTGTTGTTCTG
TTCTGCATAACATCAAGGTGCTTTACCACATGGCGTATGTGGTAAGCTGTCCAAAAATTCCAACATCAAGGTACTTTGGT
GACGATGGACAATGAGCTCCTTCCAACAATATCTGGATCGAGCTTTTAAAGTTTGCATATTCCGTTGTAGACACCACAAA
ACAGCCTTCTAGTTGTTGGGAGGTTTTCTTTGATGAAGAATATATTAATCATTATTGGAATTCCTCCATCTGGAACATGG
TCTCATATTTTATCGCCTTATGTAGCAGCACTGTTGCAATGAAACTCAGGGACTCGC-----------------------
-----------------CTTCTGTTGTCTTTTAAACAC-----TAACAGTATGCTGGTTACGTATGTTCTCTTTATAATA
ATTTGTTGTTTGTACA------------TACTCCATTTATGTAATTTGTCTATGCACAAAGTTATTTATCTCTAGTAGGG
TGGAAAATAGAATTGTAGCTTTTTTTTATGTTTTTAGTTCCTT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TTGCATGATATACAACATCTATGTG
CATGTCTCA----TATAGATATTATTCAGTGTGTTCCTGTACCATTTCCTGTATGTCTTTTTCCTCAAGTTACAGAACTT
GTCAACTTAACCGTGCTGATACATTCTTTGCAGATAATGCTGGGGTGATTGTGAATCCTAAGGGTGAGATGAAAGGTAAG
ACTGATGTACTTTATTGTTGTGACCACCATTGTGCATTCTATATGACCTTGAGAGGCTAGAACTG--CTGCTCAGGTGTT
AACTTGTCCCTCGCTCTATTATGCAGGATCTGCTATCACAGGACCCATTGGTAAGGAGTGTGCTGACCTCTGGCCTAGGA
TCGCCAGCGCAGCGAATGCCATTGTCTGA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>chr1D_1_TraesCS1D01G146100
ACTCTTTCATAATAAGCACACTAAAATCAAATTGCCACGGTCCATTATTCAGCACATGTCTCCAATCTCCCTCACTGCCC
AGATGGACCACAAAGATGTTTGATCCCATGTCCCTGAATTTCGCTTCCTTATGCAGTCCCCATGCTCTCGGCATCGTCTT
CTCCAGAGCCGACATCTTCATAGGCCTTTCTGAACAAACCTTGCCGACCACAGACCATCTAGTCGCCTTCGGGATCGGGA
TATCATGATCATCAAATACTAGCCCGTCCTCTTCCTTATCCATCAGAACCATCCCACCCATCCTAGCCGACAGACTTGCT
GCTGGATCAGGTGTTTTGCTCTCCACCGGAGGTTCAGACGATCTCCGGCTAGCTGGATCCCCGGTCTTCCGCAGATTGGG
CGTCTCAGCCGCCGTCGTTGTTACCGGGGTCGCATGAGGTTTCTTTGCAGCAGTCGCCGATCCACT---------AGCCT
TCTCCGCCATCGCCTCCGCCCCTGACGA--AGAAAAGCCGCCGCGGCCTGCGATCCGAGTGCGCCGTCGCAACCATGA-C
CGCCGCCGTAGACACACCACCCCCAGCAAG-AAACCCTAACCCTAGCGCAGTCGCACGATCGCCTCGCAATCGCCTCCTG
CCCCGTAGCGTTTCACCTGTGGTGGACCCCTTACCGCGTCCTGTTACTTACACACCTCAATTGACCCTTGAGGAGACTCC
CTAACGAGCTCCTAAATTGGTTGCTCCTTTTTTTTTCTCGAAATAGTGAGGAGTACTCATACCCTCGTGCCGTGCATAAA
AGGTCGTGTGTGGAGCTTTTCCGGCCCATTGTTCTCTCATGAGAAAACTCAGCCCAGAAGAGCAACTAGCGAGTGGCCCT
AACGTGCTCCCTAGAACCCAAAGACGAGGCCCACCTACCTCAC---TCAATATAAGCAACCCAAGCCGCGAAACCCTAAT
CGGTACACTTACTCTTCGCGCCGCCGCTCGGAGCAAGCGCCGCAGGGGACGCCGCCATGTCGAAGCGCGGTGCGTGCAGC
CGCCTCTCTCCGCCCTCTTCGGAGGCTCCTGCGTCCGTTCGTGTATCTCGTTAATCTAGCCTAACACGCACTTGGTGGGA
AATTTTGCAGGGAGGGGAGGATCGGCGGGGAACAAGTTCCGGATGTCCCTGGGTCTGCCGGTGGCAGCGACGGTGAACTG
CGCCGACAACACGGGCGCCAAGAACCTGTACATCATCTCCGTGAAGGGCATCAAGGGAAGGCTCAACCGCCTGCCGTCGG
CCTGCGTCGGCGACATGGTCATGGCCACCGTCAAGAAGGGGAAGCCCGACCTCAGGAAGAAGGTCATGCCGGCGGTCATC
GTGCGCCAGCGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTCGAAGGTAACGATGATTCCCAGTGTTGTTT
TATGAGATCCTGTATTAGCTCTCATTAGAAGATCTGGATGCTTGTGATCTCGCACGGCTCCGCCTAGATTCACGCCAAAA
CAGTACAGCGCCGTGAAGAAACATCTTAAACGATGATAGGGTATCGACTCTCTTGATTTCTTTAGCAGACGGTGCATGCT
TT-TGAATGTTGCATGAAAACTGTCTTAAAACACACCTTTATACTGCTCATTTCTTTTATGACGTTGTCACTGTTGTGTA
TAGAGTT---GAGG-AGTATAATTAGAGTGCCTGACGTTCTTGAAGTATGCTGTTGTCAAAATTCCTCCATGTTAAAGTC
TGCCATTATTTGATTTAGCTATGTAGCTTTCATTGCTGCATTGGTAAATCAGATCTGTCAGGACGACATTTGTTGTTCTG
TTCTGCATAACATCAAGGTGCTTTACCACATGGCGTATGTGGTAAGCTGTCCAAAAATTCCAACATCAAGGTACTTTGGT
GACGATGGACAATGAGCTCCTTCCAACAATATCTGGATCGAGCTTTTAAAGTTTGCATATTCCGTTGTAGACACCACAAA
ACAGCCTTCTAGTTGTTGGGAGGTTTTCTTTGATGAAGAATATATTAATCATTATTGGAATTCCTCCATCTGGAACATGG
TCTCATATTTTATCGCCTTATGTAGCAGCACTGTTGCAATGAAACTCAGGGACTCGC-----------------------
-----------------CTTCTGTTGTCTTTTAAACAC-----TAACAGTATGCTGGTTACGTATGTTCTCTTTATAATA
ATTTGTTGTTTGTACA------------TACTCCATTTATGTAATTTGTCTATGCACAAAGTTATTTATCTCTAGTAGGG
TGGAAAATAGAATTGTAGCTTTTTTTTATGTTTTTAGTTCCTT-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------TTGCATGATATACAACATCTATGTG
CATGTCTCA----TATAGATATTATTCAGTGTGTTCCTGTACCATTTCCTGTATGTCTTTTTCCTCAAGTTACAGAACTT
GTCAACTTAACCGTGCTGATACATTCTTTGCAGATAATGCTGGGGTGATTGTGAATCCTAAGGGTGAGATGAAAGGTAAG
ACTGATGTACTTTATTGTTGTGACCACCATTGTGCATTCTATATGACCTTGAGAGGCTAGAACTG--CTGCTCAGGTGTT
AACTTGTCCCTCGCTCTATTATGCAGGATCTGCTATCACAGGACCCATTGGTAAGGAGTGTGCTGACCTCTGGCCTAGGA
TCGCCAGCGCAGCGAATGCCATTGTCTGAGGAGCTTGTTTGGGATAATGATATGTTTCCTTAGTTTCAGATTTGTACTGG
ATGATGAATGTACCTGAATTATTTGTTTGCCAGATATTTATCCGAATGAGGCTCAACCTCTTAACTTTTCCGCTCTCTGG
GTTAAAAGATCTC-TTTATCACTTATCAGCTTCTTTGCTAGAACTTTATTTTTCACGAGCTCCAAAGGTTGTGATATCGA
CGTAATAAGAAATTGTCTTGCCTTTAAACTTGTGATGAAATGATACTCCATGCGTTGCCCAGCTTTCAAATCCATCCATT
TGTTAGCATGACGAGAAAATCTTGAGCATGATA-----------------------------GCCGGCCCTCCAAAATTA
GATATATTGCCACATAGCCCAGGGGGTTAAGGGCACCCTAATGTCTCTAATGTCCTCCCAAAAGTGTGCGAAAATACCAT
TATCCTTGTAGGGGCAACAAACACACTCTGCT---------AGAATTGCATGTCAAAGCCAATGCCAAGGACGAGAGGGT
TGGTGCACATCCTCCAAATCCATTGGACCCGAAGGATGATCAC---CTTGGCGAGGTCGGGGATCCCCTCCAACTGCTTG
AGGACCCCTACTTGTTGACTGCAAGAACCATAAGCTGGCTTCCAAGTGGCGTGCCGACCAGGAATAAGTTGACCAATTAA
GGTGGCTTCCAAGTGGGAACTCTAGTGCCCCACTGGAAGCTTTCCTAGTCGAGGGTGGAATCCCGATGTGGAATGGGGCT
AACTCGCGCCCATCACCAATGCTGCCCCAAGGCCCACATCCTTCAAATAACAAATTGGGGTCACCAAGCATTTGGTGAAG
CTA-GCGTGTAGTCTGAAAGTGTGACCAAAAAGTGTAAGCACGGACCGCAAGCAGCTCCGCCCTGTGAGGATGTCAAAAG
ATAACCACATCATCTCCAAAGAGCGAGACACCGATCACCAAATATGTAGGTACAGGCTATTTGTAGCACCCTAACCACTC
TCGCCTTTGTCAGGAGCCGGTTAAAGAGTGTC
>chr7D_3
--TCTTTCACAATAAGCACACTAAAATCAAATTGCCAGGGACCATTGTTCATCACGTGTCTCCAGTCGCCCTCGCTGCCC
AAGTGAACAACGAAGATATTGGATCCCATGTCTCTGAATTTTGCTTCCTTGTGTAATCCCCAAGCTCTCGGCATCGTCTT
CTCCACAGCAGACATCTTCATAGGTTTTTCAGAGCTAACCTTACAAACCACAGACCATCTAGATGCCTTAGGGATCGGGA
TCTCGTGATCTTCAAAGACGAGTCCATCCGCCTCCTTGTCCATTAGAACCATCCCTCCCAACCGTGCTGAAAGGCTTGCT
GCCGGATCAGGTGTTTTGCTCTCCACCGGAGATGCCGACGATCTCCGGCTAGCCGGATCCCCGGTCTTCTGCGATTGTGG
CGTTGTAGCCGCCGCCGCCGACTTCGGGGTCATTTTGGGTTTCATCGCAGCAGCCGCCGCGCT---------TCCAGCCT
TCTCCGCCATCGCCTCCGCTTCCG--GCGGAGAGTAGCCGCTCCGACCCGCAACCAAGGTGCGTCGGCGCCAACCTGAGT
CGCCGCCATATACTCACCACCCCCGGCAAG-AAACCCTAACCCTAGCGTAGTCGCACGATCGCCCCGCAATCGCCTCCTA
CCCCGTAGAGTTACCCCTGTGGTGGACCC---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>chr3A_11
----------AATGAGCACACTAAAATCAAACTGCCATGGTCCATTATTCAACACATGTCTCCAATCTCCCTCGCTGCCC
AAGTGGACAACAAAGATATTTGACCCCATGTCTCTGAACTTGGCCTCTTTGTGTAAACCCCATGCCCTAGGCATCGTCTT
CTCAAGCGCCGACATCTTCATTGGCCGTTCCGAGCACACTTTTCCAACCACTGACCACCGTGAAGCCTTGGGGATCGGTA
GTTCATGGTCCTCAAACACAAGCCCGTCCGCCTCCTTATCCATCAAGACCATCCCTCCCAGTCTTGCAGAGAGACTCGCC
GCCGGATCAGGTGTTCTACTCTCCACCAGAGACACTGACTCTCCCCTGCTACCTGGATCACCCGTCTTCCGCGGTC----
--TAGAAGTCGACGCCGTCGCAGCCCGGGTCA---GAGTTTTCCTGGCGGTCGTCTCCGCGGTCACCTTCGCTCCAGCTT
CCTCCGCCATTGCCTCCGGCCTCACAGCGGAGAAACTAA--CACAGCCTATGTCCAGATCGCGCCGTCGCAACCC--AGC
CGCCGCCGTATCGTCACCACCCCCAGCAAGAAAACCCTAACCCTAGCGCAGTCGCACGATCGCCAGGCAATCACCGCCTA
CCCCTCAGCGTTTTCTGTGTGGTGGACCC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>chr1B_750
ATAGTGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AGGAGTACTCATACCCTCGTGCCGTGCAT---
----------------------------------------------ACTCGGCCCAGAAGAGCAACTAGCGTATGGCCCT
AACTAGTTCCCTAGAGCCCAAGGACGAGGTCCACCTACCTCACTCATCAATATAAGCAACCCAAGCCGCGAAACCCTAAT
CGATACACTTACTCTTCGCGCCGCCGCTCGGAGCAAGCGCCGCAGGGGACGCCGCCATGTCGAAGCGCGGTGCGTGCAGC
CGCCTCTCTCCGCCCTCTTCGGATGCTCCTGCCTCCTTTCGTGTATTTCGTTAATCTAGCCTAACACGCACTTGGTGGAA
AATCGTGCAGGGAGGGGAGGATCGGCGGGGAACAAGTTCCGGATGTCGCTTGGTCTGCCGGTGGCAGCGACGGTGAACTG
CGCCGACAACACGGGCGCCAAGAACCTGTACATCATCTCCGTGAAGGGCATCAAGGGAAGGCTCAACCGCCTGCCGTCGG
CCTGCGTCGGCGACATGGTCATGGCCACCGTCAAGAAGGGGAAGCCCGACCTCAGGAAGAAGGTCATGCCGGCGGTCATC
GTGCGCCAGCGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTCGAAGGTAACGGTGCTTCCCAGTCTTGTTT
GATGAGATCCTAGATTAGCTCTTATTAGAAGATCTGGATGCTTGTACTTCCGCACGACTCA-CCTAGATCCACGGT-AAA
ACAGTTGACGCCGTGAAGAAACACCAGAGACGATGATAGGGTATGGAGACTCTTGGATTCTTTAGCAAACGATGCATGCC
TTCTGAATGCTGCGAGAAAATTGTCTTAAATCACACCTTCATACTGCTCATTTCTTTTATGCCGTTGTCACTGTTCTTTA
TAGAGTTAAGAAGGAAGTATAATTAGAGTGCCTGACGTTTTAGGAGTATGCTGTTGCCAAAATTCCTCCATGTCAAAG--
----------------------------------------------------ATCTGTCCGGATTACATTTGTTGTTCTG
TTCTGCATAACATCA----------------------------------------------------AAGGTACTTTGGG
GACGATGGACAATGAGGTCCTCC-AACAATATCTGGAGCGAACTTCTAGG------------------------------
-------------TGTTAGGATTTTTCCTTTG---AAGAATATAATAATCATCACCGGAATTCCTCCATCTGGAACATGG
TGTTGTATTCTATCGCTTTATGTAGCAGCACTGCTGCAATGAAACTCCAGG-----------------------------
------------------------------------AC-----TTGCAGTATGCTGGTTATTTATGCTCTCTTTATAAGA
ATTTATAGTTTGTACA------------TACTTGAATCATGTAATTTA--------------------------------
---------------------TTTTTTACGCTTTTAGTTTCTTTTGGATGTTCATAGTGAATTGAGAACCATATCTCATA
CATTATTATGTACTAGTAAATGGCACGTGCCATGCACGTGTAGATTTTAGAATTATTATGAAATGTTGTGTGTTGGTGCA
AGTAGTCCGATTGCCAATATTTATTAACTTCATTTTTCAGGCATAATATGGTACACCTACATGCTTACATTGACAACGGT
AGGTTTGTCTAATCAATTAGGATTTTACACAAATAAATTATTGGTAGAAACAACAGAAAAGTCATGTCATAATATATCTA
AAATGAATTTATAAGAGAAAGTACAGCCTAACACATAGTATTAAGCTTCTGCTTACTTACCATTCACTAATCTGGCGCAT
GCAATTTCTCTCTCTCTCTCTCTCCCATCAATCGTCATTTTTTTTCCTAAGTAGCTGTCCACTCGAATGTGTCTGGTCAA
TTCTAGTCTACTTGCTAGAGTACTGTAGGGCTCGGGAGCACGCCAGAATTTTCTAGATATCAGTGAGAGGAATCTTCACG
CGTACGGGCAGGCTGGCAACGCAGGACGCCCCAGCACCGCGAATCCCACTACTGTGGGCCGTTAGATTGCCCTATCAAAT
GGTGTATATGTGGCCACGTAGTTTCCTTGCTACAGTTATTGAACGTGAACCGTTTGATTGCAAATATCCAACGGCCTGTA
TGAGTTGATATTGGTACACTATATAGTGGTATAGATACTGCAATGTCTTTTCAAGTTGCGTGATGTGCACCATCTATGTG
CATGTCATA----TAG-GATATTATTCAGTGTATTCCTGTACCATATCCTGTATGT---TTTTCTCAAATTACAGAATCT
GTCAACTTAACCGCGATGATACATTGTTTGCAGATAATGCTGGGGTGATTGTGAATCCGAAGGGTGAGATGAAAGGTAAG
ACTGATGTACTTTATTGTTGTCACCACCATTTTGCATTCTATACGACCTTGAGAGGCTAGAACTG--CTGCTCAGGTGTT
AACTTGTCCCTCGCTCTATTATGCAGGATCTGCTATCACAGGACCCATTGGTAAGGAGTGTGCTGATCTCTGGCCTAGGA
TCGCTAGCGCAGCAAATGCCATTGTCTGAGGAGCTTGTTGGGGATAATGATATGTTTCCTTAGTTTCAGATTGGTACTGG
ATGATGAATGTACCTGAGTTATTTGTTTGCCAGATATTTATCCGAATGAGGCTCAACCTCTTAACTTTTTTGCTCTGTGG
GTTAAAAGATCTCTTTTATCACTTATCAGCTTCTTCGCTAGAACTTTATA-TTCACAAGCTCCAAAGGTTGTGATACCGA
CATAATAAGAAATGGTCTTAACTTTAAACTTGTGATGAAATGATACTCCATGCGTTGCCCAGCTTTCAAATCCATCCATT
CGTTAGCATGACAAGAAAATCGTGAGCATGATAAGTGGGAATGTGCATCATGGTTTGGGACAGCCGGCCCTCCGAAATTA
GATATATTGCCACATAGCCCAGGGGGTTAAGGGCGCCCTAATGTCTCTAATGTCCTCCCAAAAGTGTGGGAAAATTCCAT
TATCCTTGTAGGGGCAACAAACACACTCTGCTTGTTACGCAAGAATTGCATGTCAAAGCCAATGCCAAGGACGAGAGGAT
TGTTGCATATCCTCCAAATCCATTGGATCCGAAAGATGATCACCTTCTTGGCGAGGCCGGGGATCCCCTCCAACTGCTCG
AGGACCTTG--TTGTTGACTGCAAGAACCATAAGTTGGCTTCCAAGTCGCGTGGCGACGAGGAATAACTTGACCAATTAA
GGTGGCTTCCAAGTGGGAACTCTAGTGCCCCACTGAAAGCTTTCCTAGTCGAGGGTGGAATCTCGATGTGGAATGGGGCT
AACTCGCGCCCATCACCAATGTCGCCCCAAGGCCCACATCCTTCAAATAACAAATTAGGGTCACCAAGCATTTGGTGAAG
CTTGGCGTGTAGTTTGAAAATGTGACCAAAAAGTATAAGCACGGACCGCAAGCAGCTCCGCCCTGTAAGGATGGCAAAAG
ATAACCACATCATCTCCAAAGAGCGAGACACCGATCACCAAATCCGTAGGTGCAGGCTATTTGTAGCACCCTAACCACTC
TCGCCTTTGTCAGGAGCCAGTTAAGAGTGTC-
>chr1A_775
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TGCCCTGCATAAA
AGGTTGTGTGTGGAGGTTTTCCGGCCCATTGTTCTCTCATGAGAAAACTCGGCCCAGAAGAGCAACTAGCGAGTGGCCCT
AACTCGCTCCCTAGAACCCAAGGACGAGGCCCACCTACCTCAC---TCAATATAAGCAACCCAAGCCGCGAAACCCTAAT
CGATACACTTACTCTTCGCGTCGCCGCTCGGAGCAAGCGCCGCAGGGGACGCCGCCATGTCGAAGCGCGGTGCGTGTAGC
CGCCTCTCTCCGCCCTCTTCGGAGGCTCCTGCCTCCGTTCGTGTATTTCGTTAATCTAGCCTAACACACACTTGGTGGGA
AATTTTGCAGGGAGGGGAGGATCGGCGGGGAACAAGTTCAGGATGTCGCTGGGTCTGCCGGTGGCAGCGACGGTGAACTG
CGCCGACAACACGGGCGCCAAGAACCTGTACATCATCTCCGTGAAGGGCATCAAGGGAAGGCTCAACCGCCTGCCGTCGG
CCTGCGTCGGCGACATGGTCATGGCCACCGTCAAGAAGGGGAAGCCCGACCTCAGGAAGAAGGTCATGCCGGCGGTCATC
GTGCGCCAGCGCAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTCGAAGGTAACGATGATTCCCAGTGTTGTTT
TATGAGATCCTGTGTTAGTTCTGATTAGAAGATCTGGATGCTTGTGATTCCGCATGACTCC-CTTAGATCCACGGT-AAA
CATTACAAGGCCGTGAAGAAACACCAGAAACGATGAAAGGTTGTCGAGTC------------------------------
-TCTCAAATTTCCAAGGAAATTGTCTTAGAACGC--CTTCATACTGCTCATTTCTTTTATGCCGTTGTCACTGTTCTGTA
TGGAATTAAGGAGT-AGTATAATTATAGTGCCCGACGTTTTTGAAGTATGCTGTTGTCAAAATTCCTCCATGTCGAAGTC
TAGCATTATTTGATTGAGCCATGTAGCTTTCGTTGCTG------------------------------------------
---------------------------------------------------------------CATCAAGGTAGTTTGGT
GACGATGGGCAATGAGGTCCTTC-ATCAATATCTGGAGCAAACTTTTAATGTTTGCGTATTCCTTTGTAAACACCACAAA
ATAGCCTTCTAGGTGTTTCTATTCA----------AAGAATATAATCATCATCATCGGAATTCCTCCATCTGGAACATGG
TCTCATATTCTATGGCCTTATGTTGCA-----------ATGGAACTCTGGGAGTTGCATCTCACACCATGATTCCTTCTG
CTTGGTTCTTTGTTGCTCTACTGTTGTCTTTTATAAACACTAATAACAGTATGCTGGTTAGTTATGTTCTCTTTATAAGA
ATTTGTAGTTTGTACGTTGTACTTACTTTACTCCAGTTATGTAATTTGTTTACGCACAAAATTATTTATCTCTAGCAGGG
GAGCAGATAGAGTTGTAGCTTC--TTTATGCTTTTAGTTCCTTTTGGATGTTCATAGTACTATGAGAAACCAATCAC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------ATATTGGTATGTATACTGTGAGATCTTCTCAAGTTGCATGATGTACAACATCTATGTG
CATGTCATGTATGTAG-CATATTATTAAGTGTATTCCCCTACCATTTCATTTATGT---TTTTCTCAAATTACAGAAGCT
GTCAACTTAACCGCAATGATACATTGTTTGCAGATAATGCTGGGGTGATTGTGAATCCTAAGGGTGAGATGAAAGGTAAG
ACTG---TACTTTATTGCTGTGACCACCATTGTGCATTCTATACGACCTTGAGAGGCTAGAACTGTGCTGCTCAGGTTTT
AACTTGTCATTTGCTCTGTTATGCAGGATCTGCTATCACAGGACCCATTGGTAAGGAGTGTGCTGACCTCTGGCCTAGGA
TCGCTAGCGCAGCAAATGCCATTGTCTGAGGAGCTTGATTGGGATAATGATATGTTTCCTTAGTTTCAGATTTGTCCTGG
ATGATGAATGTACCTGAATTATTTGTTTGCCAGATATTTATCCGAATGAGGCTCAACCTCTTAACTCTTTTGTTCTCTGG
GTTAAAAGATCTCTTT-ATCACTTATCAGCTTCTTTGCTATAACTGTTTG-TGCACATGCTCCAAAGGTTGTGATATCGA
CATCATAAGAAATGCTCTTCCCTTTAAACTTGTGATGAAATGAT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>SNPs
-S-------S---------------------------S-------------S---------------------S------
-SS-----S--------S--------------S--------S--------S--S-S------------------------
------------------------------S--S--------S--S----------------SS-----S----------
-S--------S-----S--S---------S-S-----------------------S----S---S--S--S---------
--S----------------------------S-S-S------------------------------------S-S-SS--
---SSS--------S---S-SSS--------SSS---------S-S-------------SS-SSSS--------------
----------------------S-SS-S--------------S----------S-S------------------S-----
----------S--S--------------------------------------------------S--------------S
--------------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------
----S----------S----------------------------------S-----------------------------
---SS----------------S----------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------S-------------S---------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-------------------------SS------S----S-------S----SSS---
--S----S---------------S-SS--------------------S-------SS----------S---S-------S
--------------S-----S------------------S---------------------S-------------S----
---------------------------------------S---------------------------------S------
-SS------------S---S-----------S------SSSSSSSSSSSSSS-------S---SS---------------
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
----------------S------S-------------S---S-------S------S------S-----S----------
-S----------S----S---SS---S-----SSS---------S-------S--S------------------------
---------S-----------------------S-------------S----S-S-------------------------
-------------------S-------------S-S------------------------SS----------------S-
------S----------------------------S-------------S--S-------S--------------S----
SS-S-S-----S------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
------SS-------SS---------------S-----------------------SSS---S-----S--------SS-
-------------S-S---------S------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
----S--------S------------------------------------------------------------------
---------------------------------------------------------------------SS---------
-------------------------------------------------SS-----S-----------------------
-S-----------S-----S------------------------------------------------------------
S-----------S--------S---------------------------------------------------S------
----------------------------------S---------------------------------S------S----
------------------------------------------------------------------------------S-
--S----S-------------------S-----S----------------------S---------------------S-
------SSSSS-----------------------S------------S-----S----S--------S------------
-----------------------------------S--------------------------S-----------------
---------------------SS---------------------------------S-----------------------
--S----------S-----S--------------S-------------------------------S------S------
-------------------------------------------SS------S----------------------------
------------------S-----SSSSSSSS
>forward_82
--------------------------------------------------------------CAATCTCCCTCACTGCCC
AG------------------------------------------------------------------------------
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>reverse_1523
--------------------------------------------------------------------------------
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--GTACAGCGCCGTGAAGAAAC----------------------------------------------------------
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--------------------------------
>forward_805
--------------------------------------------------------------------------------
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-----------------------------------------------------------------CGTGCCGTGCATAAA
AGGTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1871
--------------------------------------------------------------------------------
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------------------------------TGGCGTATGTGGTAAGCTGT------------------------------
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>forward_1546
--------------------------------------------------------------------------------
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------AGCGCCGTGAAGAAACATCT------------------------------------------------------
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--------------------------------
>reverse_4223
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------CCGATGTGGAATGGGGCT
AA------------------------------------------------------------------------------
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--------------------------------
