>input_sequence_46095
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-------------------------------------------------------ATGGAGGACACCACCACCTCCCAGT
ACTACTCCGTCTACCTCGTCTGGGCTCTCGTCCTCGCGCCCCTGGCGCTTGCAGTTACATGGAGAAAGAAGGCAAACAAC
AGTCTGCGGCTCCCGCCGGGGCCGTGGCAGCTGCCGGTCATCGGAAGCCTGCACCACCTCGTCAGGCAGCTCCCGCACCG
TGCCTTGCGCGACCTGGCCATGCGCCACG---GGCCGGTCATGCTGCTCCGGCTCGGCTCAGTGCCCACAATTGTGTTGT
CGTCACCAGACGCGGCGCGCGAGGTACTCAAGACCCAGGACCTGGTCTTCGCGACGCGGCGGCTCACGGCTACCATGGGC
GTCCTCACCTGCGGCGGCCGGGACATGATCTTCGCGCCCTACGGCGACTACTGGCGCCAGCTCCGCAAGATCGCCGTCAC
GGAGGTCCTTACGGCGGGACGCGTGCGCTCCTTCCGAGCCATCCGCGAGGAGGAGGTCGCCACCATGCTCTGCGCCATCC
AGTCCGCCGGTC---------CCGTGGTGGACTTGCGCGTGCTGCTGTCCGCGCTCGTCTCCGACGGCACGTTCCGCGCC
GTCATGGGCAGCCGGTGCGACTCCAAGCAGCGGGACTTGTTCCTGCATGAGCTTGACAGAATAGTCTGCCTTGCCACCGG
GCTTAACACGGCGGACCTCTGGCCGTCATCGTGGCTCGCCGGACGGCTCAGCAACGCCCTCCGCCGTGCCGAGGAGATCC
ATGCCAGCGTGTTCGGGATCATCAAGGGCATCATCCACGAGCATCTAGAGAGGAGGGAGGAGGGCCAGGGCGGCGAGGAG
GACGTGCTGGACGTGCTCCTCAAAATACACAAAGACGGTGTCATCGACATGCTTGCCGTCGAAGGCGTCATTTTTGTGAG
CATCCCATCCATATTGTATATATCGAGTTAGCTACATTTCAGACTGTATATATTGCACGGATCTCTGCCGTGTCTTCTAA
CCCCTCCTTATCAATATTGATTTGACCTGCGCGTAGGACATCTTCAGCGCCGGGAGCGAGACGTCGGCGACCACACTAGA
GTGGGCGATGGCGGAGCTGGTGAAGAACCCAGCAGCGATGGTGAAGGCGACGGCGGAGGTACGGCGAGCCTTCGAGGGTG
ATGGCACGGTCGACGAGGGCAAGCTCGGCGAGCTCCCATACATGCGCCTGGTCATCCGGGAGACGTTCCGTCTGCACCCG
CCGCTGCCGCTGATGCTCCCGCGTGAGTGCCAGGAACCATGCAAAGTTCTGGGCTTCGACGTGCTCAAGGGCACGCAAGT
GATCGTCAATACCTGGGCACTAGGCCGTGACGAGCGATCCTGGGGGCCCGACGCGGCCGAGTTCCGGCCGGAGCGCTTCG
AGTCTGGCGCTGGGGTAGACGTGGACTTTAGGGGGACAGATTTCGAGCTGCTGCCGTTCGGCGCTGGGCGGAGAATGTGC
CCCGGGATGGCGTTTGGCCTGGCCGGCGTGAAACTCCCGCTTGCTAGCATGCTGCTCCACTTTGACTGGGAGGCGCCCAA
CATCTCAAACCTGGCCGAGTTCGACATGACAGAGCAATTCGGTGTCACCGCTCGGCGGAAGGCCAACCTCCTGCTGCGCC
CTTCGCTTCGCGTGCCACTGCCAACCTCTCCACCTCTTTAA---------------------------------------
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------------------
>chr7B_1_TraesCS7B01G469000
GATACAATATCTTATTCAAGTGAGGCGAGAAACATCATGTGTGCTCTAACTTAAAAAATCCTTTGAATTAGTTACTACTC
TTGAAGAATGTGCTTCAAAGTCGAGAAAAATTACACTCAGCGGAAGTCCTCCATG-----------------CCACTGCC
CCTCCATCCCGTAGCAACCCATGAGCATGTTTCCTAGTCTATTCATTAACGGCTCTCGAAAGATGGAAATTTCCAACTCA
AA----AAAGAAAGAAAGATGGAAATTCCACATACTTGTTTTTGTCAAACACTCATATGCACGTGCATGACCAAGAAATT
ACATGTTAGCACTAAATGGACAGGGATATATTTGTGTGCAGGCAGCTTGTGGAATCTTCTGTGCCGTGGAGACACGCAAC
TTGCTTCCCATTAATTATGTGGATATATAC-TACCGGTCGATGTACTCGATCACGACAGCTACC---TGTGCGCTGAGCT
CGATGATGCATC---------CAGTGTTCGGTCCACGTCACATGCTTAGA------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------AAAACTTCTTTGGAGGGTGTGGAAATT
TACGGCTCAGATCTGGAATTAGTGGTGCGGCACGTGCGGGTACTATATTCCTTAGCAGCCGGAGCGCCGGTGGTAGGCAA
TATGTATACGG---------------------------------------------------------------------
-----------------------CTGTTTGTATGGAGGAGGATGTACGCCTTCTTCAACTTTAGCCCTCTAGGGTATGTG
TAAACTTTATTTTGGCAGAGCAGGG------------------------------TTGAGATATTTTCTACTATG-TTGT
TATCGATCGAGAGAGTTGC-ATACATGTCGAAAGTCTCGGAGAAGTC--------------TATGTCTAGATGTGACATA
GTTATATCACATCTAACCTGATGTTTACTATGTTGGTAGTTTTTTTTTGTGCCAGCTTTTATTTATTCTTTGTTGCTGTG
TTATTTATGGCAGCTTACACGTGACATCCTTAAAAAAATATCTAGATGTGAATTAGACAAACTGAAGTCTATATATATGT
GGTCGAAATGATTTGGAATCTCTCAGGCATGCGACGTCCTTCATAGCACATACAAATGGAGGACACCACCACCTCCCAGT
ACTACTCCGTCTACCTCGTCTGGGCTCTCGTCCTCGCGCCCCTGGCGCTTGCAGTTACATGGAGAAAGAAGGCAAACAAC
AGTCTGCGGCTCCCGCCGGGGCCGTGGCAGCTGCCGGTCATCGGAAGCCTGCACCACCTCGTCAGGCAGCTCCCGCACCG
TGCCTTGCGCGACCTGGCCATGCGCCACG---GGCCGGTCATGCTGCTCCGGCTCGGCTCAGTGCCCACAATTGTGTTGT
CGTCACCAGACGCGGCGCGCGAGGTACTCAAGACCCAGGACCTGGTCTTCGCGACGCGGCGGCTCACGGCTACCATGGGC
GTCCTCACCTGCGGCGGCCGGGACATGATCTTCGCGCCCTACGGCGACTACTGGCGCCAGCTCCGCAAGATCGCCGTCAC
GGAGGTCCTTACGGCGGGACGCGTGCGCTCCTTCCGAGCCATCCGCGAGGAGGAGGTCGCCACCATGCTCTGCGCCATCC
AGTCCGCCGGTC---------CCGTGGTGGACTTGCGCGTGCTGCTGTCCGCGCTCGTCTCCGACGGCACGTTCCGCGCC
GTCATGGGCAGCCGGTGCGACTCCAAGCAGCGGGACTTGTTCCTGCATGAGCTTGACAGAATAGTCTGCCTTGCCACCGG
GCTTAACACGGCGGACCTCTGGCCGTCATCGTGGCTCGCCGGACGGCTCAGCAACGCCCTCCGCCGTGCCGAGGAGATCC
ATGCCAGCGTGTTCGGGATCATCAAGGGCATCATCCACGAGCATCTAGAGAGGAGGGAGGAGGGCCAGGGCGGCGAGGAG
GACGTGCTGGACGTGCTCCTCAAAATACACAAAGACGGTGTCATCGACATGCTTGCCGTCGAAGGCGTCATTTTTGTGAG
CATCCCATCCATATTGTATATATCGAGTTAGCTACATTTCAGACTGTATATATTGCACGGATCTCTGCCGTGTCTTCTAA
CCCCTCCTTATCAATATTGATTTGACCTGCGCGTAGGACATCTTCAGCGCCGGGAGCGAGACGTCGGCGACCACACTAGA
GTGGGCGATGGCGGAGCTGGTGAAGAACCCAGCAGCGATGGTGAAGGCGACGGCGGAGGTACGGCGAGCCTTCGAGGGTG
ATGGCACGGTCGACGAGGGCAAGCTCGGCGAGCTCCCATACATGCGCCTGGTCATCCGGGAGACGTTCCGTCTGCACCCG
CCGCTGCCGCTGATGCTCCCGCGTGAGTGCCAGGAACCATGCAAAGTTCTGGGCTTCGACGTGCTCAAGGGCACGCAAGT
GATCGTCAATACCTGGGCACTAGGCCGTGACGAGCGATCCTGGGGGCCCGACGCGGCCGAGTTCCGGCCGGAGCGCTTCG
AGTCTGGCGCTGGGGTAGACGTGGACTTTAGGGGGACAGATTTCGAGCTGCTGCCGTTCGGCGCTGGGCGGAGAATGTGC
CCCGGGATGGCGTTTGGCCTGGCCGGCGTGAAACTCCCGCTTGCTAGCATGCTGCTCCACTTTGACTGGGAGGCGCCCAA
CATCTCAAACCTGGCCGAGTTCGACATGACAGAGCAATTCGGTGTCACCGCTCGGCGGAAGGCCAACCTCCTGCTGCGCC
CTTCGCTTCGCGTGCCACTGCCAACCTCTCCACCTCTTTAAGACCCTTCCGAGTG----TACATGTACTAAGCCTAGAAG
GAATAGATGGGAGATTGGTGAAACTGATGTTTTGCTGACTGAGCCTTGTGGGCGTACATATAGGCAGGGGCGGAGCTCCC
GATGCACCACTTTAACAAG-CATAATTTTTTTTAGCTTTTTTAGGGTACCCTATACTGCTTGGGGGGGGGGGGGACCAGT
ATAACTAAATCCTACCGTTAATTTCAT-------------------------------------------------TCTT
CAGTACCTG-AGGCCTAAACGGGATTATGGTGTTGTTTGTTTCTCTAGTCCTAGGACTTTTTCTAGTTCCTGGGACTTTT
TAAAAAGACTCTCAAGGAGGTGCTTCTAAGGACTTTTAGTAAAAAGTCCAAAAAAGTCCCACCCTGTTTGGTTTGCTAGG
GACTTTTTCTAGTCTCTACACCAAAAAGTCACTGGAAACAAACACCCCCTGTGTATTAACCAAGATGCCAGCCTATTTCG
CTTGCTCGCTCTCATGGCCGCCATGCGCTAGCTAGCTAACCTTGCTGCCGCGTGCCGCATACTGCGACCCGACTTGCTCG
TCTACCTTGGCGTCGTGTCCCCATTTCTCTATCTACGTCGCCCAACCCCATCACAGACATACATGGAACAAGACATGGTG
GTCACAGCTCGTTCA-------------------------GCGTGCTCCTCGGTCCTGCCTGGGCGCCATGGCCG-----
---GGACGGCGAACTTTTGTACACGGCAAGTCTCCGTGCCAACGGACAACGGCGCCAGGTTGTTTCATCACCAC-CGTTG
TGAACCAGGACAAAACGAGAGCAGTGTGAGGTATGTTCACCATGGG-------CAGGCCAATGCCTCATGGCCGTCGGAC
CTATTGGAGAAGAAAAGCACGGTCCAGCCGTCCAGGCTGAAGCCTATGCCATGCTGTCGAGCGCCGGATCCATGCATGGG
GAAGGAAAAGGATTCAGGCTTGCAAGGGAGCGAAGACGGGCTGGGGAAG-AAGAGAAGGCACAGCGGTGGCCATCGGAAG
TCTACCAGCGTCCGGAGT
>chr7D_2
ATACAACG-TCTTATTCAAGTGAGGCGAGAAACATCATGTGTGCTCTAACTTCAAAAATCCTTTGAATTAGTTACTACTC
TTGAAGAATGTGCTTCAAAGTCGAGAAAAATTACACTCAGCGGAAGCCCTCCATGCACCACCCTCTCTCCAACCACTGTC
CCTCCATCCCGTAGCAACGCACGGACATGTTTCCTAGTCTATTCATTAACGGCTCTTGAAAGACGGAAATTTCCAACTCA
AA----AAAGAGAGAAAGATGGAAATTCGACATATCTGTTTTTGTCAAACACTCATATGCACGTGCATGACCAAGAAATT
ACATGTTCGCACTTAATGGGCAGGAATATATTTATGTATAGGCAGCTTGTGGAATCTTCTGTGCCGTGGAGACACGCAAC
TTGCTTCCCATTAATTATGTGGATGTATACATACCGGTCGATGTACTCGATCACGACAGCTACCAGCTGTACGCTGAGCA
CGATGATGCATGCA----AGGCAGTGTTCGGTCCACATCACATGCTTAGACTACCTATAGTGGGAGTAATATAGATAGTA
ACATCATACATATCTAGATAAAATAGATGATGCGACAAATAATAAATGAAGAAAGAGAGAAAGATAGTAATATATCAAGG
CAAGATGTGTCTATAGCCTAATAAATGAAGTGTTGCATGTTACCACATATATGTTACTTCCCACTATAGAAGTGGTAACA
TAGACTACTAACATGTGCATGTTACTAGCTTATATTATTATCCTAGTCTTAGAAAAACTTTTTTT-AGGGTGTGGA----
----------------AATTAGTGGTGCAGCAAGTCGGGGCACTATTCCCCTTAGCCGCCAGAGCGCCGGTGGTGGGGAA
TAT-TATACGG---------------------------------------------------------------------
-----------------------TTATTTGTATGGAGGAAGATGTACGCCTTCTTC------------------------
--AACTTTATTTTGGCAGAACAGGG------------------------------TTGAGATATTTTCTATGATGTTTTT
TATCGATCGAGAGAGTGCATATACATGTCGAAAGTCTCGGAGAAGTC--------------TA-----------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TATATGT
GGTCGAAAAAG-TTGGAATCTCTCAGGCATGCGACGTCCTTCACAGCACATACAAATGGAGGACACCACCTCCCG---GT
ACTACTCCGTCTACCTCGGCTGGGCTCTCGTCCTCGTGCCCCTGGCGCTTGCACTTACATGGAGAAAGAGGGCAAACAAC
GGTCTGCGGCTCCCGCCGGGGCCGTGGCAGCTGCCGGTCATCGGAAGCCTTCACCACCTCGTCAGGCAGCTCCCGCACCG
TGCCTTGCGCGACCTGGCCATGCGCCACG---GGCCGGTCATGCTGCTCCGGCTCGGCTCGGTGCCCACAATGGTGCTGT
CGTCGCCAGACGCGGCGCGCGAGGTACTCAAGACCCAGGACCTGGCGTTCGCGACGCGGCGGCTCACGGCTACCATGGGC
GTCCTCACCTGCGGCGGCCGGGATATGATCTTCGCGCCCTACGGCGACTACTGGCGCCAGCTCCGCAAGATCGCCGTGAC
GGAGGTCCTTACGGCGGGACGCGTGCGCTCCTTCCGGGCCATCCGCGAGGAGGAGGTCGCCACCATGCTGCGCGCCATCC
AGTCCGCCGGTC---------CCGTGGTGGACTTGCGCGCGCTGCTGTCCGCGCTCGTCTCCGACGGCACGTTCCGCGCC
GTCATGGGCAGCCGGTGCGACTCCAAGCAGCGGGACCTCTTCCTGCATGAGCTTGACAGAATAGTCCGCCTTGCCACCGG
GCTTAACACGGCGGACCTATGGCCGTCATCGTGGCTCGCCGGACGGCTCAGCAACGCCCTCCGCCGTGCCGAGGAGATCC
ATGCCAGCGTGTTCGGGATCATCAAGGGCATCATCCACGAGCATCTAGAGAGGAGGGAGGAGGGCCAGGGCGGCGAGGAG
GACGTGCTGGACGTGCTCCTCAAAATACACAAAGACGGTGTCATCGACATGGTTGCCGTCGAAGGCGTCATCTTTGTGAG
CATCCCATCCATATTGTATATATCG------------------------------CACGGATCTCTGCGGTGTCTTCTAA
CCCCTCCTTATCAATAGTGATTTGACCTGCGCGCAGGACATCTTCACCGCTGGGAGCGAGACGTCTGCGACGACACTAGA
GTGGGCGATGGCGGAGCTGATGAGGAACCCAACAGCGATGGTGAAGGCGACGGCGGAGGTACGGCGAGCCTTCGAGGGTG
ATGGCACGGTCGACGAGGGCAAGCTCGGCGAGCTCCCATACATGCGCCTGGTCATCCGGGAGACGTTCCGTCTGCACCCG
CCGCTGCCGCTGATGCTCCCGCGCGAGTGCCAGGAACCATGCAAAGTTCTGGGCTTCGACGTGCTCAAGGGCACGCAGGT
GATCGTCAATACCTGGGCACTAGGCCGTGATGAGCGATCCTGGGGGCCCGACGCGGCCGAGTTCCGGCCGGAGCGCTTCG
AGTCCGGCGCTGGGGTAGACGTGGACTTTAGGGGGACAGATTTCGAGCTGCTGCCGTTCGGCGCTGGGCGGAGAATGTGC
CCCGGGATGGCGTTCGGCCTGGCCAGCGTGGAGCTCCCGCTTGCTAGCATGCTGCTCCACTTTGACTGGGAGGCGCCGAA
CATCTCAAACCCGGCCGAGTTCGACATGACAGAGCAAATCGGTGTCACCGCTCGGCGGAAGGCCAACCTCCTGCTGCGCC
CTTCGCTTCGCGTGCCACTGCCAACCTCTCCACCACATTAAGACCGTTCTGACTGTACATACATGTACTAAGGGTTGAAG
GAATAG-TGAGAGATTGGTGAAAGTGATGTTTTACTGCTTGAGCCTTGTGGGCGTACATATAGGCAGGGGCGGAGCTCCC
GATGCACCACTTTAACAAGGCATAATTTTTTT------------------------------------------------
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>chr7A_181
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-------------------------------------TCTATTCATTAGCAGCTCTCGAAAGATGGAAATTTCCAACTCA
AGAAAGAAAGAAAGAAAGATTGAAATTCCACATACTTCTTTTTGTCAAA---TCATATGCACGCACATGACCAAGAAATT
ACATGTACGCAGTTAATGGACAGGGATATATTTGTGTGTAGGCAGCTTATGGAATCTTCTGTGCCGGGGAGACACGCAAC
TTGCTTCC-ATTAATTATGTTGATATATACATACCGGTCGATGTAGTCGATCACGACCGTTACA---TGTACGCCGAGCT
CGATGATGCATGCATGCAAGGCTGTCTTCGATCGACACCATATGATTTGG------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------AAATCTTTTTGG-ACGGTACGGAAATT
TACGGCTCGGAGCTGGAATTAGTGGTGCAGCC-----------------------------GAGCGCCGGTGGCGTCTAA
GACTCTCTTCGTCCCAAATGTCTCTTTCTACTACTAGTTTTTAATATAAAATATATTAAAATTGAGATACACTTATTTTG
GGACAGACCAAGTATGTAGTACACTGTTTGTATGGAGGAGGATGTATGCCCTTTGA----------------GGTCCGTG
TAAACTTAATTTTGGCAAAACACGTAAGATCGATCTTATCGATGACGAAGCAGAATTGAGATATTTTCTAGGATGTGATC
GACCTTTCCCCC----TAC-CTCCACATAGATACTCCCGGAGAAGTCTATATATATATATATA-----------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TATATAT
GGTCGAAAAAG-TTTGGAATG-TCAGGCATGCGACGTTCTTAG-AGCACATACAAATGGAGGACAGCATCTCCCAC---T
ACTACTCCGTCTACCTCGGCTGGGCTCTCGTCCTTGCGTCACTGGCGCTTGCACTTAGGCGCAGGAAGACGGCAAACAAC
GGCCTGCAGCTCCCGCCGGGGCCATGGCAGCTGCCGATCATCGGAAGCTTGCACCACCTCGTGAGGCAACTCCCGCACCG
CGCCATGCGCGACCTGGCGCGGCGCCACG---GGCCAGTCATGCTGCTCCGGCTCGGCTCAATGCCCACACTGGTGCTGT
CGTCGCCAGACGCGGCACGCGAGGTACTCAAGAACCAGGACCTGGCGTTCGCGACGCGGCGGCTCACAGCTACCATGGGC
GTCCTCACCTACGGCGGCCGGGACATGATCTTCGCGCCCTACGGTGACTACTGGCGCCAGCTCCGCAAGATCGCCGTGAC
GGAGGTCCTTACGGCGGGACGCGTGCGCTCCTTCAGAGCCATCCGCGAGGAGGAGGTCGCCACCATGCTGCGCGCCATCC
AGTCCGCCGGTC---------CCGTGGTGGAGTTGCGCGCGCTGCTGTCCGCGCTCATCTCCGACGGCACGTTCCGCGCC
GTCATGGGCAACCGGTGCGACTCCAAGCAGCGGGACCTGTTCCTGCGTGAGCTTGACAGAATAGTCCGCCTTGCCACCGG
GCTTAACACGGCGGACCTGTGGCCGTCATCGTGGCTTGCCGGACGGCTCAGCAACGCCCTACGCCGTGCCGAGGAGATCC
ATGCCAGCGTGTTCGGGATCATCAAGGGCATCATCCACTAGCATCTAGAGAGGAGGGAGGAGGGCCAGGGCGGCGAGGAG
GACGTGCTGGACGTGCTCCTCAAAATACACAAAGACGGTGTCATCGACATGGTTGCCGTCGAAGGCGTCATCTTTGTGAG
CATCCGATCCAAATTGTATATC--------------------------------------------GCCGTGTCTTCTAA
CCCCTCCTTATCAATATTGATTTGACCTGCGCGCAGGACATCTTCAGCGCCGGGAGCGAGACGTCGGCGACGACACTAGA
ATGGGTGATGGCGGAGCTGATGAAGAACCCAGCAGCGATGGTGAAGGCGACGGCGGAGGTACGGCGAGCCTTCGAGGGTG
ATGGCACGGTCGATGAGGGCAAGCTCGGGGAGCTCCCATACATGCGCCTGGTCATCCGGGAGACGTTCCGTCTGCACCCG
CCGCTGCCGCTGATGCTCCCGCGCGAGTGCCGGGAACCATGCAAAGTTCTGGGCTTCGACGTGCTCAAGGGCACGCAGGT
GATCGTCAATACCTGGGCACTAGGCCGTGATGAGCGATCCTGGGGGCCCGACGCGGCCGAGTTCCGGCCGGAGCGCTTCG
AGTCTGGCGCTGGGGTTGACGTGGACTTTAGGGGGACAGATTTC----------CGTTCGGCGCTGGGCGGAGAATGTGC
CCCGGGATGGCGTTCGGCCTGGCCAGCGTGGAGCTCCCGCTTGCTAGCATGCTGCTCCACTTTGACTGGGAGGCGCCCAA
CATCTCAAACCCGGCCGAGTTCGACATGACAGAGCAATTCGGTGTCACCGCTCGGCGGAAGGCCAACCTCCTGCTGCGCC
CTTCGCTTCGCGTGCCACTGCCAACCTCTCCACCTCTTTAAGACCCTTCTGAGTC----TGCATGTACTAAGCGTAGAAG
TAATAGAGGGGAGATTGGTGAAACTGATGTTTTACTGCTTGAGCCTTGTGGGCGTACATATAGGCAGGGGCGGAGCT---
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>chr5B_1109
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---CTGCGGCTGCCGCCGGGGCCGTGGACGCTGCCGGTGATCGGCAGCATGCACCACATCGTCGGGGCGCTCCCGCACCG
GGCCATGCGCGACCTGGCGCGGCGGCACGGGTGGCCGGTCATGCTGCTCCGGCTCGGCGAGGTGCCCACGCTGGTGGTCT
CGTCCCGGGAGGCGGCGCGCGAGGTGATGAAGACCCACGACGCCTCGTTCGCGACGCGGCCGCTGAGCTCCACCGTGCGC
GTGCTCACCAAGGGCGGCCGGGACATCGTCTTCGCGCCCTACGGCGACTACTGGCGCCAGATGCGCCGCATCGCCGTCAC
CGAGCTCCTCACGACGCGCCGCGTCCTCTCCTTCCGTGCCATCCGGGAGGAGGAGGTCGCTGCCATGCTCCGGGCCGTCG
CATCCGCCGGGAACGGCGGCGCCGTGGTCGACATGCGCGCGCGGCTGTCCGCGCTCGTGGCCGACAGCACGCTGCGCGTC
GTGATTGGCGACCGCTGC------AGCGGCCGCGACGTGTTCCTCCGGGAGCTCGAACGCTCCGTCGGGCTCGTCGCGGG
GTTCAACCCCGCCGACCTGTGGCCGTCGTCACGGCTCGCCGCCTGGGCTAGCGGCGCCGTCCGCCGCGCCGAGGAGTGCC
GTGACACCGTATTCGGGATCCTCGACGGCATTATCGCCGAGCACCAGGAGAGGATGGGCGCCGGTGCCGGCGACGCCGAG
GACCTTATCGACGTGCTCCTGAGGATACAGAAGGACGGTG----------------------------------------
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>chr3D_1118
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------------CCGCCGGGGCCGTGGACGTTGCCGGTGATCGGCAGTCTGCACCACATCGCCGGGCAGCTCCCGCACCG
TGCCTTGCGCGACATAGCGCGGCGGTACGGGTGGCCCGTGATGCTGCTCCACCTCGGCGAGGTGCCCACGCTCGTCGTCT
CCTCCCGCTCCGGTGCGCGCGAAGTGATGAAGACCCACGACGCTGCGTTCGCCTCACGGCCCCTGAGCTCCACCGTGCGC
GTGCTCACAAACGGCGGGCGGGACATCATCTTCGCCCCCTATGGCGACCACTGGCGAATGATGCGCCGGATCGCCGTGAC
CGAGCTCCTCACGGCCCGCCGAGTCCTCTCCTTCGGTGCTATCCGGGAGCAGGAGGTCGCCGCCATGCTCCGCGCCATCG
CTGCCGGCGGGG---------AAGAGGTCGACATGCGCGCGCGGCTGTCGGCAATGGTGGCGGACAGCACGGTGCGCGCC
GTGATGGGGGACCGCTGT------AGGGACCGGGATGTGTTCCTCCGGGAGGTCGACCGCGCCAACGAGCTTGGCAGGGG
GTTCAACCTGGCCGACTTGTGGCCGTCATCGCGGCTCCTCGTTTGGGCCAGCGGCGCCGTTCGCCGTGCCGAGGAGTGCC
GTGACGCCGTATTCGGGATCCTCGACGGCATCATCGTCGAGCACCTGGAGAGGATGGA----------------------
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------------------
>chr1A_2804
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-----------------------------------CTTTTTTACGGTACCCTATACTGCTTGGTGTGA--GGGGACTAGT
ATAACTAAATCCTACCGTTAATTTCATGTGGGCAGTAATAGGCATTTTCTGTTCTTAAAAAGCAATGTGAATCTTCTCTT
CAGTACGTGAAGGCCTAAACGGGATTA-----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TGTATGAGCCAAGATGCCAGCCTATTTCG
CTTGCTCGCCCCCATGGCCGCCATGCTCTAGCTG----ACCTTGCTGCCGCGTGCCGCATACTGCGACCCGACGCGCTCG
TCTACCTTGGCATCGTGTCCCCATTTCTCCATTTGTGTCGCCCAACCCCATCATAGACATACATGGAACAAGACATGGTG
GCCACAGCTCGGTCG-------------------------GCACGCTCCTCCGTCCTACCCGGGCGCCATGGCCG-----
---AGACAGCGAACTTCTGTACACGGCAAGTCTCCACGCCGACGGACAATGGTGCCAAGTTGTTTCATCACCAC-CATTG
TGAACTAGGACAAAATGAGAGCAGTGTGAGGTATGTTCACCATGGGAGGGGCATAGGCCAATGCCTCATGGCCGTCGGAC
CTATTGGAGAAGAAAAGCACGGTCCAGTCGTCCAGGCTGAAGCCTACGCCATGCTGTCGAGCGCCAGATCCATGCACGGG
GAAGGAAAATGATTCAAGCTTGCAAGGGAGTGAAGACGGGCTGGGGAAGGAAGAGAAGGCACATCGGTGGCCACCGGAAC
TCTACCAGCGTC------
>chr7D_3088
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-------------------------------------------------TGTGTATGAGCCAAGATGCCAGCCTATTTCG
CTTGCTCTCTCCCATGGCCGCCATGCTCTAGCTG----ACCTTGCTGCCGCGTGGCGCATACTGCGACCCGACGCGCTCG
TCTACCTTGGCGTCGTGTCCCCATTTATCCATCTGCGTCGCCCAACCCCATCACAGACATACATGGAACAAGACATGGTG
GCCCCAGC----------------------------------GCGCTCCTCCGTCCTGCCCGGGCGCCATGGCCG-----
---GGACGGCGAACTTCTGTACACGGCAAGTCTCCGCGCGGACAGACAACGGCGCCAAGTTGTTTCGTCACCAC-CGTTG
TGAACCAGGATAAAACGAGAGCAGTGTGAGGTATGTTCACCATGGGAGGGGCGCACGCCAAGGCCTCATGGCCGTCGGAC
CTATTGGAGAAGAAAAGCACGGTCCAGCCGTCCAGGCTGAAGCCTACGCCATGCTGTCGACCGCCGGATCCACGCACGTG
GAAGGAAAAGGATTCAGGCTTGCAAGGGAGCGAAGACGGGCTGGGGAAGGAAGAGAAGGCACAGCGGTGGCCACCGGAAC
CCTACCAGCGTC------
>chr2A_3090
--------------------------------------------------------------------------------
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---------------------------------------------------TGTATGAGCCAACATGCCAGCCTATTTCG
CTTGCTCGCTCCCATGGCTGCCATGCTCTAGCTG----ACCTTGCTGCTGCGTGCCGCATACTGCGACCCGACGCGCTCG
TCTACCTTGACGTCGTGTCCCCATTTCTCCATCTGCGTCGCCCAACCCCATCACAGACATACATGGAACAAGACGTGGTG
GCCGCAGCTCAGTCA-------------------------GTGCGCTCCTCCGTCATGCCCGGGCGCCACGGCCGGGAT-
-------GGCAAACTTCTGTACATGGCAAGTCTCTGCGCTGACGGACAACGGAGCCAAGTTGTTTCGTCACCACTCGTTA
TGAACCAGGACAAAATGAGAGCAGTGTTAGGTGTGTTCACCATGGGAGGGGCGCAGGCCAATGCCTCATGGCCGTCATAC
CTATTGGAGAAGGAAAGCACAGTCTAGCCGTTCAGGCTGAAGCCTACGCCATGCTGTCGAGCGCCGGATCCATGCACGGA
GAAGAAAAAGGATTCAGGCTTGCAAGGGAGCGAAGGT--GCTGGAGAAGGAAGAGAAGGCACAACGGTGGCCACCGGAAC
TCTACCAGCATC------
>chr5B_3090
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---------------------------------------------------TGTATGAGCCAAGATGCCAGCCTATTTCG
CTTGCTCTCTCCCATGGCCACCATGCTCTAGCTG----ACCTTCCTGCCGCGTGTCGTCT------ACCTGTCACGCTCG
TCTACCTTGGCGTTCTGTCCCCATTTCTCCATCTGCGTCGCCCAACCCCATCACAGACATACATGGAAGAAGACATGGTG
GCCATAGCTCGGTCAAG-------------------------GCGCTCCTCCGTCCTGCCCGGGCGCCATGGCCGGGAGC
CCGGGACGGCGAACTTCTGTACACGGCAAGTCTCCGCGCGGACGAACAACGACGCGAAGTTGTTTCGTCACCAC-CGTTT
TGAACCAGGACAAAACGAGAGCAGTGTGAGTTATGTTCACCATGGGAGGGGCGCAGGCCAATGCCTCATAGCCGTCAGAC
CTATTGGAGAAGAAAAGCACGGTCCATCCATCCAGGCTGAAGCCTACGTCATGCTGTCGAGCGCCGGATCCATGCACGGG
GAAGGAAAAGGATTCAGGCTTGCAAGGGATCCATGGACA----GGGAAGGAAGAGAAGGCACAACGGTGGCCACCGGAAT
CCTACCAGCGTCGGGA--
>chr3B_3090
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---------------------------------------------------TGTATGAGCCAAGATGCCGGCCTATTTCG
CTTGCTCTCTCCCATGGCCGCCATGCTCTAGCTG----ACCTTGCTGCCGCGTGTCACATACTGCGAACCGTTGCGCTCG
TCTACCTTGGCGTCGTGTCCCCGTTTCTCCATCTGCGTCGCCCAACCCTATCACAGACATAGATGGAACAAGACATGGTG
GCCACAGCTCCGTCAGCGTGCTCCTCCGTCAGCTCCGTCAGCGCGCTCCTCCGTCCTGCTCGGGCGCCATGGCCGG----
----GACGGCGAACTTCTGTACACGGCAAGTCTCCGCGCGGACGGACAACGGCGCCAAGTTGTTTCGTCATCAC-CGTTG
TGAACCAGGACAAAACGAGAACAGTCTGAGGTATGTTCACCATGGGAGGGGCGCAGGACAATGCCTCATCGCCGTCGGAC
CTATTGGAGAAGAAAAGCAAGGTCCAGCCGTCCAGGCTGAAGCCTGCGCCATGCTGTCGAGCGCCGGATCCATGCACGGA
GAAGGAAAAGGATTCAGGCTTGCAAGGGATGCAT----A----GGGAAGGAAGAGAAGGCACAGCGGTGACCACCGGAAT
CCTACCAG----------
>SNPs
SSSSS-SSS-------------------------------------------S---------------------------
----------------------------------------------S-------------------------------S-
------------------S--S-SS-------------------------------------------------------
--------------------------------------------------------------------------------
-------S-----S------------------------S-----------------------------------------
----------------------------------------------------------------------S---------
-----------S------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S----S--------------
--------S--S----------------S---S--SS---S-----SSS-------S---S-------------S--S--
---S----------------------------------------------------------------------------
--------------------------------------------------------SSSSSSSSSSSSSSSS---SS---
-------------------S--------------------------------------------------SS------S-
-----------------S---------------------------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
--------SSSS-------------------------------S--------------------------S--SS-SS--
------------------S----------------------------------S---------------S----------
S-------------------------------------------------------------------------------
------------------------------------------------------------------------S---S---
----S----------------------------------------SS---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
---------------------------------------S----------------------------------------
------------------------------------S-----------------------------S-------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------------------S--------
-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
---------------------------------S-------------------------------------S--------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------------------------------------S--
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------S---------S-----S-S-----------------------------------------------
-----------S--------------------------------------------------------------------
-------------------------------------------------S-----------------------S------
---------------------------------S---SS-----------------------------------------
--------------------------------SSS--------S-------------------S-S-SSS------S---
--------------------------------------------------------------------------------
------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-S---------------------
-----------S--------------S------SSSSS-----------------------------------SS-----
-----------------------------S----S---------------------------------------------
-S---------S-------------------------------S-------S--------S-------------------
----------------S-------------------S---S----------------S----------------------
--------------------------------------------------------------------------------
----------------------------------------------S-----------------------------S---
-------------------------------------------------------------------------S-----S
------------S---SS
>forward_1306
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------ATGGCAGCTTACACGTGACA------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_2472
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------CACACTAGA
GTGGGCGATGG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------
>forward_1307
--------------------------------------------------------------------------------
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-------TGGCAGCTTACACGTGACAT-----------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_2500
--------------------------------------------------------------------------------
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-------------------GTGAAGAACCCAGCAGCGAT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_2292
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------AGACGGTGTCATCGACATGC----------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_3857
--------------------------------------------------------------------------------
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----------------TTGTACACGGCAAGTCTCCG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
