>input_sequence_46066
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATGAGACGCAAGCAAAATATGCATGGTATTCTTCACTTCTAATGTTTCAGTTCCACTATCCTATCCTACTTGACTG
GCTATGTGCTGTATATACTGATTTCCTGCTGCTATTAGAGTTATAACATCTTTTTGTATTCCTCTGGCAGAAAATGGCAC
AATCATGATTCAGTTTGGTCAGCAAGTGCCTAACTGCGAGTCCTCAGCTAGCGATTCTCCTCAAGAAGTGTCCGGGATGA
GTGAAGGAAGCTTTAATGAGCAGAATGATCAATCTGGTTCGCCCTAGACCTGCCA---ACTATTTCTTTTCTGAATT---
ACTATTCCATAATCTTGTAATATCATCTCTCCTGGAAATACAGAATGGAGTAGTCTCCAAAAATAGTAATGGAAAGAACG
ATATTGATGATTGAGGACCTTGATGTGCACTTACATATCAAAGTTAGATGACATTTGTTTCCTCCTTGTATTTAATACTA
GGTAATCGCGATGGCTACACCAAG---AGTGATGAAGGCAAGATGATGTCGGCTTTGTCTCTGGGCAATTCAGAAACAGC
ATACACACCCCCAAAACCTGACCGCACTCATCCCTTCGTAAGTCTCTATTATGATGCTTAAA--------AATTTCTGAA
TTCGAAGTGTTTGTTGAATGGCGAGCATGTGAATTGTGCAAGATGTTTGCTTTTTCAGGCCATATCATACCCATATGCTG
ATCCTTACTATGGTGGTGCAGTGGCAGCCTATGGCACACATGCTATTGTGAGTGATATTTCTGTCATCCCTGTTCCCTCA
CTAATTTCTGGCCTTATTTTTTTTCTGTGCTTGACGGTCTTGCTTAT--ACC----TTTGGCAACTGTTTGGATTTTTGT
GTGCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGCATGTGCTTTAGGTATAACTGGAATGACTGTTGAGA
CAAGGCAACTAAACATGATTGTGTTTAATCACACCAATTTCACTTAAAAGTCAAATTTTCAATGTTGAGCAGCATACTGG
TGGTGGCAACTTATTTTTATTTCAGA-ATCTCCATCCCCACCGCAGATTGGTTCTATTCTTTTTGTTAGGTTTAATATGG
TGCCTTTCGATGTTACTAACTCATCTTTATCTGGTGCAAAACAATTTGAATAGATGCACCCCCAGATGGTGGGTATGGTA
CCATCCTCTCGAGTGCCACTGCCAATTGAACCGGCTGCCGCCGAAGAGCCCATTTATGTGAACGCGAAGCAATACCATGC
CATTCTCCGAAGGAGACAGCTCCGCGCAAAATTAGAGGCTGAAAATAAGCTGGTCAAAAGCCGTAAGGTATCATTTTTAT
GCATGATTTCATTTT--AAAAACACAAGTACTATCGTTGGCCCCATCGGC-ATCTTTTGGTTTATTTTCCCTGTAGTAGA
AATGAATTTAGTCCACATGCACTCT-------ACATAACATAATATTCATGCCTCTGTTCAGCCGTACCTCCACGAGTCC
CGGCACCAGCACGCGATGAAGCGGGCTCGGGGGACAGGCGGGCGGTTCCTCAACGCAAAAGAGAAGTCCGAGGCGGCCTC
CGGCGGCGGCAATGCATCAGCAAGATCTGGCCACGCCGGCGTTCCTACAGACGGTGGTGGCATGTTCTCGAAGCACGACC
ACACCTTACCGTCCGGTGACTTCCATTACCGCGCAAGAGGGGGCGCCTAG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr4B_1_TraesCS4B01G290400
GGAGAAGACTTGCAGAGGAGAGGAGCAAGTTGCGGAGGAGGCAGCGGCAAGGGAGGAGGGGTCGCCGGAAGGGGGACATG
CTCCCTCCACATCTCACATCTCGCAGGTCTCCTCCTCCT--CCTCCTCCGCTGCCTCTCACTCGCTTCCCCTGCTTCTCC
TCCGGGGCGCGGGCGGGCGCGCCGGCTCTGTGCCTGCCCCTGCCCGAGCTCGGCCTCCTGCCATTGCTGACCGGTTCCCT
GGGCCGTCTGCCCGGTTTCCTGCTGGATCCGACTGGGTTCTTGCTGTTTCAATTGTTTTTCGGCCGATTTGCCGCTCAGA
TTCGTGGGTGCATTCTGCTGCGGTTCAACTGTGTTTTCGTGTGTGTGTCTAC--AGCCTTTTGTTATAGTTTA-------
------------AGTTAAGAAAGATTAGTAGTAGTACTAGCAATACTATTACCTGGGGGTAAACTGAAATCTTGTTGCTT
GGAGGATTTAGATGGAGTGTTGACTGTGAATTTGTTGTGATTTGCAGCTATTTCTTCAAAGTAGCTGTTGTTGTCTGAAT
TTTTTTAACAGCTG--------TAAGTGGGGAGAAGAGAACCCCTGAGCTTATAAATGAGCGATTCGGATTTGTCTAGC-
GGGGGACTAGCAAATCATCTACTCAGAGTTTGTATACTCAGTTATTAGTACACCTTGCCTTAAGGATCAGAATTTCTGAT
TCAGGGACCAGGTTGATGCACAGTGCTGGTGTGATTTTTTCTTTTTACATGTGCGAGCATATAATTCAGTGAGTACAGCA
TTTGACATGTGCATCATGTCAAATTCGACCGAATCTAATTTTTTAAAGTGCACGCGGCCAGTTTCAGTGATCC--TTTTT
TTTGAGTTGCGAGGAGCAATTCTACTAGTATATCTTCATGTTTCAGCGTTTAATGTA----------TTATTTGGACAGT
ATCACTTTAATCTGTTGTTGTTACTGACCTGCTGCTTACTTACATGGACAGCTTGAACTGAGAGCAAGAGTAGAAACCCA
TAAGATGAGACGCAAGCAAAATATGCATGGTATTCTTCACTTCTAATGTTTCAGTTCCACTATCCTATCCTACTTGACTG
GCTATGTGCTGTATATACTGATTTCCTGCTGCTATTAGAGTTATAACATCTTTTTGTATTCCTCTGGCAGAAAATGGCAC
AATCATGATTCAGTTTGGTCAGCAAGTGCCTAACTGCGAGTCCTCAGCTAGCGATTCTCCTCAAGAAGTGTCCGGGATGA
GTGAAGGAAGCTTTAATGAGCAGAATGATCAATCTGGTTCGCCCTAGACCTGCCA---ACTATTTCTTTTCTGAATT---
ACTATTCCATAATCTTGTAATATCATCTCTCCTGGAAATACAGAATGGAGTAGTCTCCAAAAATAGTAATGGAAAGAACG
ATATTGATGATTGAGGACCTTGATGTGCACTTACATATCAAAGTTAGATGACATTTGTTTCCTCCTTGTATTTAATACTA
GGTAATCGCGATGGCTACACCAAG---AGTGATGAAGGCAAGATGATGTCGGCTTTGTCTCTGGGCAATTCAGAAACAGC
ATACACACCCCCAAAACCTGACCGCACTCATCCCTTCGTAAGTCTCTATTATGATGCTTAAA--------AATTTCTGAA
TTCGAAGTGTTTGTTGAATGGCGAGCATGTGAATTGTGCAAGATGTTTGCTTTTTCAGGCCATATCATACCCATATGCTG
ATCCTTACTATGGTGGTGCAGTGGCAGCCTATGGCACACATGCTATTGTGAGTGATATTTCTGTCATCCCTGTTCCCTCA
CTAATTTCTGGCCTTATTTTTTTTCTGTGCTTGACGGTCTTGCTTAT--ACC----TTTGGCAACTGTTTGGATTTTTGT
GTGCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGCATGTGCTTTAGGTATAACTGGAATGACTGTTGAGA
CAAGGCAACTAAACATGATTGTGTTTAATCACACCAATTTCACTTAAAAGTCAAATTTTCAATGTTGAGCAGCATACTGG
TGGTGGCAACTTATTTTTATTTCAGA-ATCTCCATCCCCACCGCAGATTGGTTCTATTCTTTTTGTTAGGTTTAATATGG
TGCCTTTCGATGTTACTAACTCATCTTTATCTGGTGCAAAACAATTTGAATAGATGCACCCCCAGATGGTGGGTATGGTA
CCATCCTCTCGAGTGCCACTGCCAATTGAACCGGCTGCCGCCGAAGAGCCCATTTATGTGAACGCGAAGCAATACCATGC
CATTCTCCGAAGGAGACAGCTCCGCGCAAAATTAGAGGCTGAAAATAAGCTGGTCAAAAGCCGTAAGGTATCATTTTTAT
GCATGATTTCATTTT--AAAAACACAAGTACTATCGTTGGCCCCATCGGC-ATCTTTTGGTTTATTTTCCCTGTAGTAGA
AATGAATTTAGTCCACATGCACTCT-------ACATAACATAATATTCATGCCTCTGTTCAGCCGTACCTCCACGAGTCC
CGGCACCAGCACGCGATGAAGCGGGCTCGGGGGACAGGCGGGCGGTTCCTCAACGCAAAAGAGAAGTCCGAGGCGGCCTC
CGGCGGCGGCAATGCATCAGCAAGATCTGGCCACGCCGGCGTTCCTACAGACGGTGGTGGCATGTTCTCGAAGCACGACC
ACACCTTACCGTCCGGTGACTTCCATTACCGCGCAAGAGGGGGCGCCTAGGGCGGGCCT----TTGCCCCCTGGCAAATC
ATCCTTGGCTTATGTGTGTGGTGAATGACCGTCAATTCGGTCCAATGATATTGTAAAACTGAATTTAGAGTCTGCAAT--
--TGTTACTTGGGGGTTTGGTAGACGGTCGTTGTGTTTGGGGAC-----------GCTGCAGCTGCAGCTGCAGCTGCCG
GTTCTCTTGTTGTGGTAGGTTTGTGTGGCATGGCAGGTGCTGCTAAGCTGGAGCCTGCTTGAACTGTTTTCCTGTCACTT
TG----TTGGGGTAATAATGACCATCCTGTATGATATTAGTACTGACTTGG-----AGTAATAACCATTCCCGGCGTGAT
GCATT-GCGCC-------TGTGGTGGTGTTTCTTTTGAGCCATGAAGTTAAACGACTTGAGTGTCGGCAGTTGTTGCTCC
TTCTGGAAGTGGCAGGTTCAGAGATGATGAGATGAGACACCCAGCCTCAGATCTGTTTTTAGAGGAAAAGGGCTCTCGCC
CCGGTTCCATAGCAATAATAACGAAATCAAAACAGAGAGTCAGCGCTTACACGGCACGCGGGGGAAAACAGTCAACATGC
TGCCCCAGCAAAAACAAAGGGAGTCTACATCCCTGCCCCAGCAAAAACAAAGGGAGTCTACCCCTCCTAACTTGGCGTAG
TCCGGTTGTGATACAAGCCCTGAATGTACAAAAAAAAAATATTGATGTGGCTATAGATGGCCTGGGAGAAGCTATGTGCA
GACTAACTGGGTTCTATGGAGAGCCTAAGTGGGAAGATAAACACCTATCCTGGGAGTACTTGAGATCTCTTAGGCCGCAG
ATGATTGGCCTTGGGTGGTCATCGGGGACTTTAATGAAATTCTATATTCCCATGAGGAGGAAGGAGGGGCTCCACGTCCA
AGTCAGATGATGCAAAACTTCAGAGATGCATCGGTGGATTGCCAACTGGAGGACATGGGATATGCGGGTGAAATATTTAC
TTGGAGAAGGAGGAGACTGAGGGAAAGGTTAGACAGAGGTGTGTGT
>chr4A_2
-GAGGAGACTTGCAGAGGAGAGGAGAGAAGAGGCGGAACAAGGGAGGAG-----GGAGGGGTCGCCGGAAGGGGGACATG
CTCCCTCCGCATCTCACATCTCGCAGGTCTCCTCCCTCCTCCCTCCTCCTCTGCCGCTCACTCGCTT-CCCTGCTTCTTC
TCCGGGGCGCGGGCGGGC---------------CGGCTG--------------------GCCATTGCTGGCCGGTTCCCC
GTGCCGTCTGGCCGGTTTCTCGCTGGATCCGACTGGGTTCTTGCCGTTTCGTTCGGGTTTCGGCCGATTTGCCGCTCAGA
TTCGTGGGCGCATTCTGCTGCGGTTCTACTCTGGTCTCGTGTGTGTGTGTCCATAGCTTTTCGTTCTAGTTTA-------
------------AGTTATAAGAAAGAT-TAGTGGTGCTAGTAATACTATTACTTGGGGGTAAACTGAAATCTTGTTGCTT
GGAGGGTTCAGATGGAGTGCCCACTGTGAATTTGTTGTGATTTGCAGCTATTTCTTCAAAGCAACTGTTGTTGCCTGAAT
TTTTTTCACAGCTGTAAGCCTGTAAGTGGGGAGAAGAGAACCCCTGAGCTTATGAATGAGCGATTCGGATTTGTCTAGC-
GGGGGACTAGCAAATCATCTACTTAGAGTTTGTCTACTCAGTTATTAGCGCACCTTA--------ATCAGAATTTCTGAT
TCAGGGACCAGGTTGATGCATAGTGCTGGTGTGAATTTTT----TAG-ATGTCCGGGCATACAAATCAGTGAGTACAGCA
TTTGACATGTGCATCGTGCCAAATTCGAGCGAATCTAAGTTTTTCAAGTGCACACGGACGACTTTAGTGATCTTTTTTTT
TTTGAGTTGGGAGGAGCAATTCTACCAGTATCTATTCATGTTTCAGCGTTTAATGTA----------TAC-TTGGACAGT
ATCACTTTATTCTGTTGTTGTGACTGACCTGCTGCTTACTTACATGGACAGCTTGAACTGAGAGCAAGAGCAGAAGCCCA
TGAGATGAGACGCAAGCAAAATATGCAAGGTATTCTTCAGTTCCA-------------------CTATCCTACTTGACTG
GCTATGTGCTGTGTATACTGATTTCCTGCTGCTATTAGAGTTACAACTTCTTTTTGTATTCCTCTGGCAGAAAATGGCAC
AATCATGATTCAGTTTGGTCAGCAAGTGCCTAACTGCGAGTCCTCAGCTAGCGATTCTCCTCAAGAAGTGTCCGGAATGA
GCGAAGGGAGCTTTAATGAGCAGAATGATCAATCTGGTTCGCCCTAGACTTGCCAACTACTATTTCTTTTCTGAATT---
ATTAGTCCATAATCTTGTGATATCATCTCTCCTGGAAATACAGAATGGAGTAGTCCCCGAAAATAATAATGGAAAGAACG
ATATTGATGATTGCGGACCTTGATGTGCACTTACAAATCAAAGTTAGATGACATTTGTTTCCTCCTTGTACTTAATACTA
GGTAATCGCGATGGCTATACGAAGAGTAGTGATGAAGGCAAGATGATGTCGGCTTTGTCTCTGGGCAATTCAGAAATGGC
ATACACACCGCCAAAACCTGACCGCACTCATCCCTTTGTAAGTCTCTATTATGATGCTCAGGCGCTGGCTAATTTCTGAA
TTCGAAGTGTGTGTTGAACGGCGAGCATGTGAATTGTGCAAGATGTTCGCTTTTTCAGGCCATATCATACCCATATGCTG
ATCCTTACTATGGTGGTGCAGTGGCAGCCTATGGCGCACATGCTATTGTGAGTGATATTTCTGGCATCCCTGTTCCCTCA
CTAATTTCTGGCCTAA-TTTTTTTCTGTGCTTGATGATGTTGCTTATTTATTTATTTTTTGCAACTGTTTGGATTTTTGT
GTGCGAAGGGGAGCCTTGGCGCAGTGGTAAAGCTGCTGCCTTGTGACCACGAGGTCATGGGTTCAAGTCCTGGAAACAGC
CTCTTACAAAAATGTAGGGAAAGGCTGCGTACTATAGACCCAAAGTGGTCGGACCCTTCCCTGGACCCTGCGCAAGCGGG
AGCTACATGCACCAGGTTGCCCTTTTTGGATTTTTGTGTGCGAGCATGTGCTCTAGGTATAACTGGAATGACTGTTGAGA
CAAGACAACTAATCATGATTGTGTTTAATCACACCAATTTCACTT-AAAGTCAAATTTTCAATGTTGAGCAGCATACTGG
CGTTGCCAACTTATTTTGATTTCAGA-ATCGTCATCCCTGCCGCAGATTAGTTCTCTTCTTTTTGTTAGGTGGC------
-GCCTTTCGATGTTACTAACTCATCTTTATGTGGTGCAAAACAATTTGAATAGATGCACCCCCAGATGGTGGGCATGGTA
CCATCCTCTCGAGTGCCACTACCGATTGAACCAGCTGCCGCCGAAGAGCCCATTTATGTGAATGCGAAGCAATACCATGC
CATTCTCCGAAGGAGACAGCTCCGCGCAAAATTAGAGGCTGAAAATAAGCTGGTCAAAAGCCGTAAGGTATTC---TTAT
GCATGTTTTTACTTGGAAAAAAA--AAGTACTGTAGTTGGCCCCTTGAGC-ATCTTTTGGTTTCTTTTCCCTGTAGTAGA
AATGAATTTGGTTCACACACTCTCAATG-------TAACACAACATTCATGCCTCTGTTCAGCCGTACCTGCATGAGTCC
CGGCACCAGCACGCGATGAAGCGGGCTCGGGGAACAGGCGGGCGGTTCCTCAACGCAAAGGAGAAGTCTGAAGCTTCA--
-GGCGGCGGCAATGCATCAGCGAGGTCTGGCCACGCCGGCGTTCCCCCGGA---TGGCGGCATGTTCTCGAAGCACGACC
ACACCTTACCATCCGGTGACTTCCATTACCGCGCGAGAGGGGGCGCCTAGGGTGGGCACGCAGTTGCCCCCTGGCAAATC
ATCCTTGGCTTATGTGTGTGGCGAATGACCGTCAACTCGGTCCAGTGATATTGTAAAACTGAATTTAGAGTCTGTGCAAT
TGTGTTACTTGGGGGTTTGGTAGACAGCCCTTGTGTTTGGGGAGGGGACGATGCAGCTGCAGCTGCA---------GCCG
GTTCTCTTGTTGTGGTAGGTTTGTGTGGCATGGCAGGTGCTGCTAAGCTGGAGCCTGCTTGAACTGTTTTCCTGTCACTT
TGTTGTTTGGGGTAATAATGACCATCTTGTATGATATTAGTACTGACTT-GGAGTAAGTAATAACCATTCCCGGCGTGAT
GCATTTGCGCC-------CGTGGTGGTGTTTCTGTTGAGCCGTGTTGTTCAACGACTTGACTGTCGGCAGTTGTTGCTCC
TTTGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr4D_20
-------------------GAGGAGCAAGTTGCGGAGGAGGCAGCGGCAAGGGAGGAGGGGTCGCCGGAAGGGGGACATG
CTCCCTCCACATCTCACATCTCGCAGGTCTCCTCCTCCT--CCTCCT---CTGCCTCTCACTCGCTTCCCCTGCTTCTCC
TCCGGGGTGCGGGCGGGCGCGCCGGCTCTGTGCCTG------------------CTCCTGCCATTGCTGACCGTTTCCCT
GGGCCGTCTGGCCGGTTTCTCGCTGGATCCGACTGGGTTCTTGCTGTTTCGTTCGGGTTTCGGCCGATTTGCCGCTCAGA
TTCGTGGGTGCATTCCGCTGCGGCTCAACTGCGGTCTCGTGTGTGTCTAG-------CTTTTTGTTTAGTTTAACTAGTA
GTTAAATTTATTAGTTAGGGAAGATTTGTGGTAATACTACT------------TGGGAGTAAACTAAAATCTTGTTGCTT
GGATGGTTCAGATTGAGTGTCGACTGTGAATTTGTTGTGATTTCCAGCTATTTCTTCAAAGTAACTGTTGTTGTCTGAAA
TTTTTTAACATCTGTA-----GTAAGTGGGGAGAAGAGAACCCCTGAGCTTATGAATGGGCGATTC--ATTTGTCTAGT-
GGGGGACTAGCAAATCATCTACTGAGAGTTTGTATACTCAGTTATTAGTACACCTTGCCTTAAGGATCAGAATTTCTGAT
TCAGGGGCCAGGTTGATGCACAGTGCTGGTGTGATTTTTT----TTACATGTGCGAGCATATAAATCAGTGAGTACAGCA
TTTGACATGTGCATCATGTCAAATTCGACCGAATCTAAGTTTTCTAAGTGCACACGAACAACTCCAGTGATCTTGTTCTC
T----GTTGCGAGGAGCAATTCTACCAGTATCTCTTCATGTTTCAGCGTTTAATGTATTATTAGTATTAC-TTGGACAGT
ATCACTTTATTCTGTTGTTCTCACTGACCTGCTGCTTACTTGTATGGACAGCTTGAACTGAGAGCAAGAGTAGAAGCCCA
TGAGATGAGACGCAAGCAAAATATGCATGGTATTCTTCACTTCTAATGTTTCAGTTCCACTATCCTA--CTACTTGACTG
GCTATGTGCTGTACATACTGATTTCCTGCTGCTATTAGAGTTATAACATCTTTATGTATTCCTCTGGCAGAAAATGGCAC
AATCATGATTCAGTTTGGTCAGCAAGTGCCTAACTGCGAGTCCTCAGCTAGCGATTCTCCTCAAGAGGTGTCCGGAATGA
GCGAAGGAAGCTTTAATGAGCAGAATGATCAATCTGGTTCGCCCTACACTTGCCA---ACTATTTCTTTTCTGAATTGTT
ACTAGTCCATAATCTTGTCATATCATCTCTCCTGGAAATACAGAATGGAGTAGTCTCCAAAAATAATAATGGAAAGAACG
ATTATGATGATTGCGGACCTTGATGTGCACTTACATATCAAAGTTAGATGACATTTGTTTCCTCCTTGTATTTAATACTA
GGTAACCGCGATGGCTACACGAAG---AGTGATGAAGGCAAGATGATGTCAGCTTTGTCTCTGGGCAATTCAGAAACAGC
ATACACACCGCCAAAACCTGACCGCACTCATCCCTTTGTAAGTCTCTGTTATGATGCTCAAACGTTGACTAATTTCTGAA
TTCGAAGTGTTTGTTGAATGGCGAGCATGTGAATTGTGCAAGATGTTCGCTTTTTCAGGCCATATCATACCCATATGCTG
ATCCTTACTATGGTGGTGCAGTGGCAGCCTATGGCGCACATGCTATTGTAAGTGATATTTATGCCATCCCTGTTCCCTCA
CTAATTTCTGGCCTTC-TTTTTTTCTGTGCTTGACGGTGTTGCTTATTTACC----TTTGGCAACTGTTTGGATTTTTGT
GTGCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AGCATGTGCTCAAGGTATAACTGGAATGACTATTGAGA
CAAGGCAACTAAACATGATTGTGTTTAATCACACCAATTTCACTT-AAAGTCAAAATTTCAATGTTGAGCAGCATACTGG
CGGCGGCAACTTATTTTGATTTCAGATATCGCCATCCCTGCCGCAGATTGGTTCTCTTCTTTTTGTTAGGTTTAATATGG
TGCCTTTCGATGTTACTAACTCATCTTTATCTGGTGCAAAACAATTTGAATAGATGCACCCCCAGATGGTGGGCATGGTA
CCATCCTCTCGAGTGCCGCTGCCAATTGAACCGGCCGCCGCCGAAGAGCCCATTTATGTGAACGCGAAGCAATACCATGC
CATTCTCCGAAGGAGACAGCTCCGCGCAAAATTAGAGGCTGAAAATAAGCTGGTGAAGAGCCGCAAGGTATTATTTTTAT
GCATGATTTCATTTCGAAAAAACAGAAGTACTATCGTTGGCCCCTTCTACAATCTTTTGGGTTTTTCCCCT----GTACA
AATGAATTTAGTTCATACACACTCTCAACATAACATAACATAACATTCATGCCACTGTTCAGCCGTACCTCCACGAGTCC
CGGCACCAGCACGCGATGAAGCGGGCCCGGGGAACAGGCGGGCGGTTCCTCAACGCGAAGGAGAAGTCCGA---GGCCTC
CGGCGGCGGCAATGCATCAGCGAGACCTGGCTACGCCGGCGTTCCTGCAGAC---GGCGGCATGTTCTCGAAGCACGACC
ACACCTTACCGTCCGGTGACTTCCATTACCGCGCGAGAGGGGGCGCCTAGGGCGGGCCT----TTGCCCCCTGGCAAATC
ATCCTTGGCTTATGTGTGTGGTGAATGACCGTCAATTCGGTCCAATGATATTGTAAAACTGAATTTAGAGTCTGCAAT--
--TGTTACTTGGGGGTTTGGTAGACGGTCGTTGTGTTTGGGGAC-----------GATGCAGCTGCA---------GCCG
GTTCTCTTGTTGTGGTAGATT--TGTGGCATGGCAGGTGCTGCTAAGCTGGAGCCTGCTTGAACTGTTTTCCTGTCACTT
TG----TTGGGGTAATAATGACCATCCTGTATGATATTAGTACTGACTTGGGAGTAACTAATAAGCATTCCCGGCGTGAT
GCATTTTGCGGCCGTGGTCGTGGCGGTGTTTCTTTTGGGCCATGCTGTCCAACAACTTGA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr7A_85
CTG-----------------------------------------------------------------------------
-------CACATCTCACATCTCGCAGGTCTCCTCCTCCT--CCC------CTGCCTCTCACTCGCTTCCCCTGCTTCTTC
TCCGGGGCCTGGGCGCGC---------------CTGATCCTGCCTGAGCTT-GCCTCCTGCCATTGCTGACCGGTTCCCT
GGGCCATCTGGCCGGTTTCTCGCTGGATCCGACTGCGTTCTTGCTGTTTCGTTTGGGGTTCGGTCGATTTGCCACTCAGA
TTCGTGGGTGCATTCTGCTGCAGTTCAACTGTGGTATCATGTGTGTCTAG-------CTTTTTGTTTAGTTTAACTAGTA
TTTAAATTTATTAGTTAGGGAAGATTTGTGGTAATACTACT------------T--GGGTAAACTAAAATCTTGTTGCTT
GGAGGATTTAGATGGAGTGTTAACTGTGAATTTGTTGTGATTTGCAGCTATTTCTCCAAAGTGGC---TGTTGTCTGAAT
TTTTTTAACATCTGTA-----GTAAGTGGGGAGAAGAGAACCCCTGAGCTTATGAATGGGCGATTC--ATTTGTCTAGTA
GGGGGACTAGCAAATCATCTACTGAGAGTTTGTATACTCAGTTATTAGTACACCTTGCCTTAAGGATCAGAATTTCTGAT
TCAGGGACCAGGTTGATGCACAGTGCTGGTGTGATTTTTT-----TACATGTGCGGGCATATAAATCAGTGAGTATAGCA
TTTGACATGTGCATCATGTCAAATTCGACCGAATCTAAGTTTTCTAAGTGCATACGAACAACTCCAGTGATCTTGTTCTC
G----GTTGCAAGGAGCAATTCTACGAGTATCTCTTCGTGTTTCAGCGTTTACTGTATTATTAGTATTAC-TTGGACAGT
ATCACTTCATTCTGTTGTTGTCACTGACCTGCTGCTTACTTGTATGGACAGCTTGAACTGAAAGCAAGAGTAGAAGCCCA
TGAGATGAGACGCAAGCAAAATATGCATGGTATTCTTCACTTCTAATATTTCAGTTCCACTATCCT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>SNPs
S---S---------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-------------------------------------S------S-----SS----------------------------
----------S--------SS-----------------------------SS---SS-----------------------
---------------------------------S-S------------S-S--------------S--------------
-----------------S--------S-------------S-----------S---------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
-----------------------S--------------------------------------------------------
----------------------------------------SSSS--------------------S---------------
--------------------------------------S-----S--------S---S--SS----------S-------
-------------------------S-----S------------------------------------SSS---------
---------S-----------S-----------------------------------------------------S----
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-S-----------------------------------------------S------------------------------
----S-------------S----------------------------------------------S--------------
-------------S------------------------------------------------------------------
--------------------S-----------------------------------------------------------
---------S--------------------------S---------------------S---------------------
-----------------------------------------------S--------------------------------
-----------------------------------S---------------------------S----------------
----------------S---------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------------S----------------------------------
S----------------S------------S-------SS---------------S------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------S---------S-------------------S--S---------------S----------------
------------S----SS------------------------S------------------------------------
--------------------------------S--------------------------S-----------S--------
---------------------S------------------------S-----SS---S----------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------SSSSSSSSS----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------SS---S----------S-------------------
--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GCTGCGGTTCAACTGTGTTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>reverse_1610
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CCCAAAACCTGACCGCACTC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>forward_1276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CTCCTCAAGAAGTGTCCGGG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>reverse_3395
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGACACCCAGCCTCAGATCT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
