>input_sequence_46046
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-----------------------------------------ATGGACGCGCAGCGTGCCCTGCTTGACGCGCTGATGGGT
TCGTCGCGGGACCTGACGGAGGAGGAGAAGAAGGAGCACCGGGAGGTGGCGTGGGACGACCCCGACGTGTGCGCCCCCTA
CATGGCCCGCTTCTGCCCCCACGACCTCTTCATCAACACCAAGAGCAACCTCGGAGTATGCCCAAAGATCCACGACCCGG
CGCTCAAGCAAAGGT----------TTTTATCCTTTCTTATCTAGATTTCGATTT----CGATTTCTTTCGATTCATCAT
CCCCTCCCAACCAACATA------------------------------TGTTTGCAGCTTCGAGTCCTCCCCCCGCTACG
CCGCCGCCCTCCCCAAATTCGAGGCCGACCTCGCCCACCGCTGCGAGAGGCTGGTCTGTGTTCCTCTTCCTCTTCTTC--
-------------------ACACACAGATTTGCATCTACACAGACATGGTGGTGCTATTTTGGTTGAATTATCTATCCAG
ATTCCAACACATCTCTCTTTCTGCTGCTGCTGCTGCTGCAGGTCCAGGACCTTGATAAGAAGATCAGGCGCGGCCGCGAC
AGGCTGGCCCAGGACGTCGTGGAGGTGCCGCCCCCCGCCGCCCACGCCGAAAAGGTCGAGCAGCTCGCCATTCTCGAAGA
GAAGATCAAGAAGCTGCTCGAGCAGATTGAGCAGCTCGGCGACACCGGCAAGATCGACGAGGCCACCGCGCTCATGAGGA
AGGTAGACCCCC------CTGGCCTTCTCTTTGTGTTTACTAATCTTACTTAGGGTCTGCTTGGATTGAATTCAAGCCTG
GGGCTGCCCTACCAATTAATTAATTGGCGTTGGCGTGCTTTCGATAGTAGACACCAAAAAGTCGGATCCACGCCAATTTT
TTGGCAGCCTTTGTACATCCGCGGGTTGCCGAATCGCTGGCGGCGAAAACCTACGCCAAATTATTCGCGTGGCCAACTTT
GGCAAGGCTAGCACGGACAGTGAACGAAACATCGTCTTACTGATTATTACCAGCCATTGGTGATAATTACATGATGCCTC
AACCAAAGCTTCTGTTCCTGGCTTGCAGGTGGACATTCTCAACCTCGAGAAGTCGGCTCTGACCCACCAGATTGAGACCA
AGCTCTCCATGGTCCCGCAAGAGAAGAAGATGGAGCTCTGCGAGCAGTGCGGCTCCTTTCTCGTCACCAACGACGTCCTT
GAGAGGACGCAGTCCCATGTCACCGGCAAACAGCACATTGGTTATGGTCTGGTCAGGGAATTTCTCGCCGAATACAAGGT
TAGT---------TG---------GTTGCGCCAAAAGAGAACAATGTTC-TTCTGCTTTATGAGG-----------CC-A
AGTTCTGATGGTAG-TTGCTTTTTCAGGCTGCGAAAGAAGCGGAGAAGCTTGCAAGGGAGAAGGAAGCAGAGGAGCGTCT
GAACCGGGAGAGAGGCCACCATAACAGAGGCCACCGTGACGACTATAGGGAGAGATCTAGGGAGCATGACCGTGACCGCT
ACTATGAGCGA---AGCCGTGAAAGAGAGAGGCCCTATGAGCACGGAGGTAGAGGGTCAGACTATAGAGGCGGTTCCTAT
AACAGCCGCAGGGATTCTGAAAGGGCGAGGCCCAGAGATAGGAACGGTGGTGATTTTTCAAGAAGAGGAGACCCGGGGAG
GGTGAGGAGCAGGTCCCGGTCTCCGGGGAGGCATGGTTATTAA-------------------------------------
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>chr5D_1_TraesCS5D01G562300
CATGGGTTAATTAGCATAGATCTTAGGGGGGCTTTCCTCATAAAAACACATGCACAATCGCCT----------------T
TTCCCGGCATACGTGGC--GTGTGGCTACTTTGGATATGATTTGGGCCTAACTGAGTCCTTATCGAAAATATTATACCAT
TTTTATGGGGTTTTCAGTTTATGCATGATTTTATTACCGCCACACAAGTTTTTGTACCCCGGGTGTAATTAACTCTAAAA
-----------AGTACATGGACCA----------CCAGCGATCTCTATTG--TCGTCGTCAGGATGAGCCGTTGTCGCCG
CACCTTT-ATGGAATCTGACCTGACCTTGTCTATGACAACCACAAAGTTTTTGCTTGCCATCAAATCTCTCCGTCGCACC
CATACGACCAAAAAAAAACCTACTGTCGCTTCCCCAAGGAGATGACATGAATCTACGT-----------CGATTTCGCCC
CGATGAACAAACTCAAGGAGGATTGAAGGCTGAAAGAGCAACTAAAAAATGAAGCGTCATCTCCAACCTAAGGGCTGCAC
CTTTTGAGGGGAAAATATTCCTAACCTAAACTACTGGCCCGGAGTTGTGGCGCCCGAATCCCTCTCCCAGCCCGAGCGGG
AGGCGGAAGGGAGTCGGATCCATAGGCTCGTCGGTGAAGCATGGAGGGGATGAGTGCCCCGGGCGCTGCAATCGCAAGAG
GGAAAGAATC----------------------ACATACATACTATACATGAG----------------------------
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------------------------------TAAAACCAGATGAAAATCCTA-----GAGGAGTTGGAGTAAAT------A
CAACAATTTGGGTAACTGGACTTGGAATCTGAAATTTCATTGAGATTTGGGCCCAAATAACAATTATCC----AATCCAA
TGGCCGGCCCCTCTC--TCTCTCTCTCTCTCTCTCTGTGGTGTATTTCTTCCTCTGGCTCTCTTCTCCTGCCCCAAACAT
CTCACGCCGCCGCCGCCGCCGCCGCCGAGGCTTAGGGTTTGTGGCCGGAGATCCCTCGGATTCGATTCCATTCGA-----
------GTCGAGTCGAATCGAAGAGAAGAGAATCGATAGAGATGGACGCGCAGCGTGCCCTGCTTGACGCGCTGATGGGT
TCGTCGCGGGACCTGACGGAGGAGGAGAAGAAGGAGCACCGGGAGGTGGCGTGGGACGACCCCGACGTGTGCGCCCCCTA
CATGGCCCGCTTCTGCCCCCACGACCTCTTCATCAACACCAAGAGCAACCTCGGAGTATGCCCAAAGATCCACGACCCGG
CGCTCAAGCAAAGGT----------TTTTATCCTTTCTTATCTAGATTTCGATTT----CGATTTCTTTCGATTCATCAT
CCCCTCCCAACCAACATA------------------------------TGTTTGCAGCTTCGAGTCCTCCCCCCGCTACG
CCGCCGCCCTCCCCAAATTCGAGGCCGACCTCGCCCACCGCTGCGAGAGGCTGGTCTGTGTTCCTCTTCCTCTTCTTC--
-------------------ACACACAGATTTGCATCTACACAGACATGGTGGTGCTATTTTGGTTGAATTATCTATCCAG
ATTCCAACACATCTCTCTTTCTGCTGCTGCTGCTGCTGCAGGTCCAGGACCTTGATAAGAAGATCAGGCGCGGCCGCGAC
AGGCTGGCCCAGGACGTCGTGGAGGTGCCGCCCCCCGCCGCCCACGCCGAAAAGGTCGAGCAGCTCGCCATTCTCGAAGA
GAAGATCAAGAAGCTGCTCGAGCAGATTGAGCAGCTCGGCGACACCGGCAAGATCGACGAGGCCACCGCGCTCATGAGGA
AGGTAGACCCCC------CTGGCCTTCTCTTTGTGTTTACTAATCTTACTTAGGGTCTGCTTGGATTGAATTCAAGCCTG
GGGCTGCCCTACCAATTAATTAATTGGCGTTGGCGTGCTTTCGATAGTAGACACCAAAAAGTCGGATCCACGCCAATTTT
TTGGCAGCCTTTGTACATCCGCGGGTTGCCGAATCGCTGGCGGCGAAAACCTACGCCAAATTATTCGCGTGGCCAACTTT
GGCAAGGCTAGCACGGACAGTGAACGAAACATCGTCTTACTGATTATTACCAGCCATTGGTGATAATTACATGATGCCTC
AACCAAAGCTTCTGTTCCTGGCTTGCAGGTGGACATTCTCAACCTCGAGAAGTCGGCTCTGACCCACCAGATTGAGACCA
AGCTCTCCATGGTCCCGCAAGAGAAGAAGATGGAGCTCTGCGAGCAGTGCGGCTCCTTTCTCGTCACCAACGACGTCCTT
GAGAGGACGCAGTCCCATGTCACCGGCAAACAGCACATTGGTTATGGTCTGGTCAGGGAATTTCTCGCCGAATACAAGGT
TAGT---------TG---------GTTGCGCCAAAAGAGAACAATGTTC-TTCTGCTTTATGAGG-----------CC-A
AGTTCTGATGGTAG-TTGCTTTTTCAGGCTGCGAAAGAAGCGGAGAAGCTTGCAAGGGAGAAGGAAGCAGAGGAGCGTCT
GAACCGGGAGAGAGGCCACCATAACAGAGGCCACCGTGACGACTATAGGGAGAGATCTAGGGAGCATGACCGTGACCGCT
ACTATGAGCGA---AGCCGTGAAAGAGAGAGGCCCTATGAGCACGGAGGTAGAGGGTCAGACTATAGAGGCGGTTCCTAT
AACAGCCGCAGGGATTCTGAAAGGGCGAGGCCCAGAGATAGGAACGGTGGTGATTTTTCAAGAAGAGGAGACCCGGGGAG
GGTGAGGAGCAGGTCCCGGTCTCCGGGGAGGCATGGTTATTAATCATTTCAAGT--TATGAGACTCGTGAGGTAGACCAT
TATGCTCCTTTGCTTATTCATTCAGTCGCAATGTCTGAGTGCTGTCATGATTAAATTTAAACCTTACTCTGCTCTAGCAG
CTTTTTGTTGAAACCATA--CCTATGGTCTTCCTTTTATTATAGAGAGGATAAAAAACAGAGGAAGGTACCATCTGTT-C
TTGGCAGTATTTCTGTGTTTATTACATCTTACGTGCACTCTGAGATTGTGTTTCCCAGTCTAGGAACTG-AAAAAATGTT
GTTTGATATGATT-GAGCTGAAAGCCGTATGATGATACTATCATCCTATCCTA-----GGCAGGTATTCCGTAACCTCTG
TCTGTCTTACATGTTAAAATGATTGATTGATTGATTGATGACATACAAGGTTTGGTTAGGACCTGGAAGAAACACTAGAC
AGGTAACTTGTAACCTCTGTCTTATATACATGTTAAAATGATTGATGATATATACAAGGTTGGGTTGGGTCGGACCTGGA
AGAAACACTAGACAGGTAACTCGTAATCTCCGTCTTATACATGT------------------------------------
--------------------------------------TAAAAATGATTGATGATATATATAAGGTTGGGTCGGACCGGA
CCGGACCTGGAAGAAACAGTAGGAAGGTAACCCGTGATCTCCGTCTTATACATGTTAAAATGATTGATG--ATATATACA
AGGTTGGGTTGGACCGGACCTGGAAGAAACAGTAGGAAGGTAATCCGTCACCTCTGTCTTACATGTTAAAATGGTTGATG
ATAC----------------------------------------------------------------------------
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------------------GACCTGGAAGA-ACAGTAGGAAG----------------GTCTTGCATGCCAAATTGATGAC
GTATAGAAGGTTGGG----------AAAATTCAGGTAACATTATAGTAGAGCGGTTTCTGAATGCCTAGTCTTGTACTCC
CTCCGTTCTAAATTACTCGTCACAGAAATGGATGTATTTAGAACTAAAATACATCTAGATACATCCATACCTGTGACAAG
TAATTCGGAACGGAGGGAGTACAAGATTTAATTTGCACTGCCAGTAGAGATT
>chr5D_1
CATGGGTTAATTAGCATATATCTTGT-GGGGCTTTCCGCATAAAAACACATGCACAATCGGCT----------------T
TTCTCGGTATATGTGGTGTGTGTGGCTACTTTGGATATGATTTGGGCCTGATTGAGTTCTTATCGAAAATAATGTACCAC
TTTTATGT-TTTTTTAGTTTATGTATGATTTTATTACCACCACACAAGTTTTTTTACCTCAGGCGTAATTATCACTCTAA
GAAGTGCATTGAGTACATGGAGCA----------CAACAATCTCTATCT-------------GATGAGCCGTTGTCGCCG
CACCTTT-ATAGAAGCTGACCCGACCTTGTTTATGAAAACTGGGAAGTGTTTGCTTGCTATAAAATCTCTCTATCGCACC
CATACGACAAAAAAAATTCCTACTCTCGGTTCCCCAAGGAGATGACATGAATCTACGTCGAAGCTCTGTCGATTCTGCCT
CGATGAAGAAACTCAAGGAGGATTGAAGTTAGAAAGACCAACTCGAAGACGAAGCGTCATCTCCAACC------------
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>chr7B_1
CATGGTTTAATTAGCATATATCTTA-GGGGGCTTTCCGCATAAAAACACATGGGTTAATTAGCATATATCTTAGGAGGCT
TTTCCGGCATACGTGGC--GTGTGGCTACTTTGGATATGATTTGGACCTTATTGAGTCCTTATTAAAAATAATGTACCAC
TTTTATGGGTTTTTTAGTTTAGGTATGATTTTAGTACCGCCACACAAGTTTTGGTACCCCGTGTGTAATTAACTCTAAAA
-----------AGTACATTCAGTACATGGGCCACCAACAATCTCTCTCTCTCTCATCGTTAGGACGAGCCATTGTTGCCA
CACCTTTTATTGAAGCTGACCTGGCCTTGTTTGTGACAACCGGTAAGTTTTTGCTTACCATCAAATCTCTCCGTTGCACC
CATACGACA-------------CTCTCGCTTCCTGAAGGAGATGACACGAATCTACGTCGAAGCTTTGTTGATTCCGCCC
CGGTGAACAAACTCAAG----ATTGAAGTTTGAAAGACCAACTCGAAGATGAAGCATCATCTCCAACCCAAGCGTCACAC
CTTTGA--GGAAAAAAAATCCTAAGCTAAACTACTGGCCCGGAGACGAGGCGCCCGAATCCATCTCCTAGCCAGAGTGAG
AGGCGGAAGGGGGTCGGATCCATAGGCTCGTCGTTGAAGCATGGAGGGGATGAGAGCCCAGGCTACCGCAGCCGCAAGAG
GGGAATTATTACCAAGCTAAGAGGAGTTATATACATACATACTATATATATATAGACTAGAAGAACGCCCGTGCGTTGCA
ACGGGGCCACATTAACTTTAAGAGTTCAATATCAATTATGTTAATATTACATTTAATATTCTCATACATATTAAGTGACA
TTGACGACCTTTTTTACCATCAAATTCTCTCTCTCACACACCCTCTCCCTCCCTCTTCCTCACTCTCTCTCCCCCCTCTC
TCTCTTGCTAACACACACACATATCCATCTTATTGGATACAGGACCATAATCCATCTATTTCACAAGCACACGCGCTAGT
GCATAATAATATGAATTATGTGTATTATATTTGCCACCACAACCAAGGGAATTAATTTCATGTAATCGGCCAGCCACAGC
TCCATGACAAACAATACATCTAAATTCTCAGCGTTATTTTTATGTAACATTGGCGAGATTGTTTCCTTTGTTTGGAGATT
GATTACCATCCGTGAGTTAAGCTGGGTACTAAAGAAGAATCTGATTGTGATACATGAATTGATTGTTGCCTTGTACGTTT
GGTTTTGGTATTTGAAGATTGATTACCATCCGTTAGTTGGGTTACCAAAGAAGAAATCAATCACCATATGTAGAAAAAGG
AACTACATTGCACATGCTTACACCTCATCTACTCGTGAGAATATATAGAATTGGAGCAAACAAAATAAGTGCAGACGAGA
GATAAAACATCAATGAGGATCCCTAATGCCTTGACTAATATGTTGTCCTCCAGCTTGAGAAGCACCTACAAGAAATTGGG
AGGTGGGAGGGATGACGAAAAAAAACCAGGGGAGGTGGGACGAAAATAAACCCGGAACGAAGACTACCAACTGAGACATT
AGGAGTAGAGGTCATTTAGTTGATAAAAATAAATAGAAAACGGTGTTAAAAAGGAGAAACATATTAGAATACATTGAAAA
ACCAAAAGGACGATGTAAAAGGGGATTCGCCCTGCCCCCCGGGCCTTGCCACCGAACCGGCTCAGCTGTCGAGTCCACGC
GCGGTCGTCTTCTCCTGTTCCCCGAGCCGCGTCGCTACAGAGCCGGGCTCCCGCCCGACCACCTCGCTGGCATCGAAGGG
GAATGGATAAGGGTGACGCCCTGCCTTCCCTGCCCCAATGGCCTCACTCCTCCTCGACGCCCCCTCTCGAATCCACTTCT
CCTTCTCGCTCGCTCGATCCCGTCGATCTGGACGAAGTCAGACGCCATAGCCACCATGACCAACCCCGTCCACACGGCCA
CTACCCTCCCTGCGGGCTAGGAGCTTGTCGAGGAGCTCCGAACGCCTTCGCTACTTCGTCTGCGCCAACGAGATCATGTC
CATCACCCCTGCATCGACGTCGCTGCCGTCTTCCTCAACCTTGGGCCACCGCGACATTGCCGTTCGATCCGCGCCGCGCC
CGAGCTCCCATGTCTTCCCCTAGGGCGCCATTGACACCGCCATGATCTCCTCTTGCCTTTCCCCTGTTTCCCCTCGCGTT
TGCTCTCATTAGGTATTTCGCCGTGGCCGAGAACCGCCGTCCGCCATGGCCATTGCAGGGGTAGCCACCGAGCTCCTCGG
ATTGACCCCGTGGCACATGCCCGCTCCTATGCACGCCCATGCCCGAGCCTGCGGCTCTTCTTCCGCGCCCGCGAGGCCAC
TCCCTTTCCATGCCCACGCCCGTGCTACACCGCGTCGGTCGCGCCCGCCGTTGCCGTCGCGCTCGCCGCAGCCACCGCAC
CATTGTGCCCCGCGCGACACACACCCTGGCCGCGCGCCACACTCTCGCTGGCTGCACTCACCCCGTCTGCTGCCGCCTAT
CCCTTCGCTTGCCCCGCTGTCGCGCCCCTGCCTCGCGTCGCCTCCAGTCGTGGCCATCTTCTACCGGCCGCCCCCTCAGC
CACGTTGGCCGCATCTCTGCCCTTCACCGTCGGTCGCTCGCCTCGCCTGCTGCGTGCTGCTTCCTGCTGCTATGCGCTGC
TCTACCGCTGGTACGCTGCTGCGCCATGCCCTCGACACCGCCGTGGACAAATGTGGTGGAGGGATTGTTAATGGAGTACG
AGAAGGAGGTGGCGGAGAAGGTGTGGAGAGGCAGGAGGTCTGGGGTGGTGTCACCTGGCTGTGGTGGAGGTGTTTATGCA
AGGAGTCGGAGTGGAAGGAGAGATCACAATTGAAAAGAATCGCAAAAAAATCATAACCCGAAGATCTCATTCCGAAAAAG
TGCTAATATCGATGGAGGGGTGATTTCCTTCAGCAAGTGGAAAAGACAGGAAATATTGGTTGTTATCAAGGAAATGTAAA
AATTTAGGAAAGTTAGGATTTTTGAACTGATTTCTATGCAAATGGGGTTTTATTGTTTGGTAACGTGATATCAGTACCTG
CCCGTTTGTGACGTGTCTGATTAGGAAAGTTTGCAAATGTTAAGAAACTATTTATTGGAAGGAAAGTTGTGACGTGTCTG
TTATTTGTTTCATAAAACAAATTTTCACTAATAAGAGAAATCGATTAATTTAGATAAGTTAAGAAAGTTAGGTTAAAATG
TATTATTTGTTTTCTGAAAATCTGTATTTGTTTCCTAAGACAAATTGAACCAATAAAAGGAATCGATTGATTTGCATAAT
TTAAGAAAGTTAGATCCGTGATTTGTTATACGTTAGGAAAGTGCTGGTTGTAATAAAGAGTGAAGAGAAAAATAAACCGA
TGGACCAGGGTGGGAGGGGGTGGTGGGAGGAGAGACGAAAAAAAAATACAGAGAAAATAAACCGCGGAGACTATTCACCA
ACTCGTCTATTAGGAGTAGATAGAGATAACTAAAACCAGATGAAAATCCTATAGTAGAAGAGTTGGAGTAATAAATACAA
CAACAAATTGGGTAATTGGACTTGGAACCTGAAATTTCATTGAGATTTGGGCCCAAATAACAATTATCCAAGAAATCCAA
TGGCCGGCCTGCACTTTTCTCTCTCTCTCTCTCTCTCTGGTGTATTTCTTCCTCTGGCTCTCGTG-CCTTCCCCAGACAT
CTCACACAGCCG------CCGCCGCCGAGGGTTAGGGTTTGTGGCCGGAGATCCCTCGATTGGATTGGAGCGGCCGGCGC
GGCGTGGTCGAATCGAATCGAAGAGAAG-----CGATAGAGATGGACGCGCAGCGTGCTCTGCTGGACGCGCTGATGGGG
TCGTCGCGGGACCTGACGGAGGAGGAGAAGAAGGAGCACCGGGAGGTGGCGTGGGACGACCCCGACGTGTGCGCCCCCTA
CATGGCCCGCTTCTGCCCCCACGACCTCTTCATCAACACCAAGAGCAACCTCGGAGTATGCCCAAAGATCCACGACCCGG
CCCTAAAGCAAAGGT----------TTTTATC----------------------T----AGATTTCTTCCGATTCATCTT
CATCCCCCCGCTAACAAAATCCTAATCCTAACCAAATCGATGAATGTTTGTATGCAGCTTCGAGTCCTCCCCCCGCTACG
CCGCCGTCCTCCCCAAATTCGAGGCTGACCTCGCCCACCGCTGCGAGAGGCTGGTCTGTTTCCTTCTTCCTCTTCCTCTT
GCTCTTCCCCCCCGCACGCACACACAGATTTTGCATCTACATATGTT----------TTGTGGTTGAATTATCTATCCAG
ATTCCAACATATATCTCTTTCTTT--------CTGCTGCAGGTCCAGGACCTGGATAAGAAGATCAGGCGCGGCCGCGAC
AGGCTTGCGCAGGACGTCGTGGAGGTGCCGCCCCCCGCCGCCCATGCCGAGAAGGTCGAGCAGCTCGCCATTCTCGAAGA
CAAGATCAAGAAGCTGCTCGAGCAGATTGAGCAGCTCGGCGACACCGGCAAGATCGACGAGGCCACTGCGCTCATGAGGA
AGGTCCTGCACAGACCCTCTGGCCTTCTCTTTGTGTTTACTAATCTTACTTAGGGTCTGTTTGGATTGAATTCAAGCCTG
GGGCTGCCCTACCAATTAATTAATTGGCGTTGGCGTGCTTTCGATACTAGACACCAAAAAGTCGGATCCACGCCAATTTT
TTGGCAGCCTTTGTACATCCGCGGGTTGCCGAATCGCTGGCGGTGAAAACCTACGCCAAATTATTCGCGTGGCCAACTTT
GGCAAGGCTAGCACGGACAGTGAACGAAACATCGTCTTACTGATTATTACTAGCCATTGGCGATGATTACATGATGCCTC
A---AAAGCTTCTGTTCCTGGCTTGCAGGTGGACATTCTCAACCTCGAGAAGTCGGCTCTGACCCACCAGATAGAGACCA
AGCTCTCCATGGTCCCGCAAGAGAAGAAGATGGAGCTCTGCGAGCAGTGCGGCTCCTTTCTCGTCACCAACGACGTCCTT
GAGAGGACGCAGTCCCATGTCACCGGCAAACAACACATTGGTTATGGTCTGGTCAGGGAATTCCTCGCCGAATACAAGGT
CAGTTGTAACTAGTG---------GTTGCGCCAAAACAGAACAATGTTTTCTTTTTTGTTTGCTTCATCACGCACACC-A
AGTTCTGATGATAG-TTGCTTTTTCAGGCTGCGAAAGAAGCGGAGAAGCTTGCAAGGGAGAAGGAAGCAGAGGAGCGTCA
GAACCGGGAGAGAGGATACCATAACAGAGGCCACCGCGACGACTATAGGGAGAGATCCAGGGAGCATGACCGTGACCGCT
ACTATGAGCGAGGAAGCCGTGACAGAGAGAGGCCCTATGAGCAGGGAGGTAGAGGGTCAGACTATAGAGGCGGTTCCTAT
AACAGCCGCAGGGATTCTGAAAGGGCGAGGCCCAGAGATAGGAACGGTGGTGATTTTTCAAGAAGAGGAGACCCGGGGAG
GGTGAGGAGCAGGTCCCGGTCTCCAGGCAGGCATGGTTATTAATCATTTCAAGTTATATGAGACTCATGAGGTAGACCAT
TATGCTCCTTTGCTTATTCATTCAGTCACAATGTCTGAGTGTTGTCATGATTAAATTTAAACCTTACTCTGCTCTAGCAG
CTCTTTGTTGAAACCATACCCCTATGGTCTTCCTTTTATTATAGAGAGGATAAAAAACAGAGGAAGGTACCATCTGTTTC
TTGGCAATATTTCTGTGTTTATTACATCTTACGTGCACTCTGAGATTGTGTTT-CCAGTCTAGGAACTG-AGAAAATGTT
GTTTGATATGATAAGAGCTGAAAGCCGTATGATGATACTATCATCCTATCCTATCCTAGGCAGGTATTCCGTAACCTCTG
TCTGTCTTACATGTTAAAA----TGATTGATTGATTGATGACATACAAGGTTTGGTTAGGACCTGGAAGAAACACTAGAC
AGGTAACCTCCATCT---------TATACATGTTAAAATGATTGATGATATATACAAGGTTGGGTCGGACCGGACCTGGA
AGAAACAGTAGGAAGGTAACCCGTAACCTCCATCTTATACTACATGTTAAAATGGTTGATGATACGACCTGGGAGAACAG
TAGGAAGGTAACCCGTAACCTCCATCTTATACTACATGTTAAAATGGTTGATGATACGACCTGGGAG-------------
--------------AACAGTAGGAAGGTAACCCGTAATCTCCGTCTTATACATGTTAAAATGATTGATG--ATATATACA
AGGCTGGTTCGGACCGGACCTGGAAGAAACAGTAGGAAGGTAATCCGTCACCTCTGTCTTGCATGTTAAAATGGTTGATG
ATAC----------------------------------------------------------------------------
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------------------GACCTGGAAGA-ACAGTAAGCAGGTAACCCGTAACCT--GTCTTGCATGCTGAATTGATGAC
GTATGGAAGGTTGGGTGGGACCTGGAAAATTCAGGTAACATTATAGTAGAGCGGTTTCTGAATGCCTAGTCTTGTAC---
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------------------GTACAAGATTTAATTTGCACTGCCAGTACAGATT
>chr5B_1000
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----------------------------------------GATGGACGCGCAGCGTGCTCTGCTGGACGCGCTGATGGGG
TCGTCGCGGGACCTGACGGAGGAGGAGAAGAAGGAGCACCGTGAGGTGGCGTGGGACGACCCCGACGTGTGCGCCCCCTA
CATGGCCCGCTTCTGCCCCCACGACCTCTTCATCAACACCAAGAGCAACCTCGGAGTATGCCCAAAGATCCACGACCCGG
CCCTAAAGCAAAGGTTCCTTCTTTCTTTCTTTCTTTCTTTCCCAGATTTCGATTTCTTCCGATTTCTTTCGATTCATCTT
CATCCTCCCGCTAACCAAATCCTAATCCTAACCAAATCGATGA-----TGTATGCAGCTTCGAGTCCTCCCCCCGCTACG
CCGCCGCCCTCCCCAAATTTGAGGCCGACCTCGCCCACCGCTGCGAGAGGCTGGTAT-----------------------
-------------------------AGATTTGCATCCACACTGAAT---TGGTGCTATTTTGGTTGAATTGTCCAGATTT
TAACATTT-------TCTTTCTGCTGCTGCTGCTGCTGCAGGTCCAGGACCTGGATAAGAAGATCAGGCGCGGCCGCGAC
AGGCTGGCTCAGGACGTCGTCGAGCTGTCGCCCCCTGCTGCCCACGCCGAAAAGGTCGAGCAGCTCTCCATCCTCGAAGA
GAAGATCAAGAAGCTGCTCGAGCAGATTGAGCAGCTCGGCGACACCGGCAAGATCGACGAGGCCACCGCCCTCATGAGGA
AGGTAGACTC----------------CTTTTTGTGTTTACTAATTTTA-TTAGGGTCTGTTTAGAG--------------
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-----------------------------------------GATTATTAATAGCCATTGGCGATAATTACATGATGCCCC
AACCAAAGTTTCTGTTCCTGGCTTGCAGGTGGACATTCTCAACCTCGAGAAGTCGGCTCTCACCCACCAGATTGAGACCA
AGCTCTCCATGGTCCCGCAAGAGAAGAAGATGGAGCTCTGCGAGCAGTGCGGCTCCTTTCTCGTCACCAACGACGTCCTT
GAGAGGACGCAGTCCCATGTCACTGGCAAGCAGCACATTGGTTATGGTCTGGTCAGGGAATTCCTCGCAGAATACAAGGT
CAGT---------TGTAACTAGTTGTCGTGCTACACGAGAACAATGTTC-CTTTTTTTTTGGCTTCATCACACACACCCA
AGTTCTGACGATAGTTTGCTTTTTCAGGCTGCGAAAGAAGCGGAGAAGCTTGCAAGGGAGAAGGAAGCAGAGGAGCGTCA
GAACCGGGAGAGAGGATACCATAACAGAGGCCACCGCGACGACTATAGGGAGAGATCCAGGGAGCACGACCGTGACCGCT
ACTATGAGCGG---AGCCGTGACAGAGAGAGGCCCTATGAGCAGGGAGGTAGAGGGTCGGACTATAGAGGCGGTTCCTAT
AACAGCCGGAGGGATTCTGAAAGGGCGAGGCCCAGAGACAGGAACGGTGGTGATTTTTCAAGAAGAGGAGACCCGGGGAG
GATGAGGAGCAGGTCCCGGTCTCCGGGCAGGCATGGTTATTAATCATTTCAAGTTATATGAGACTCGTGAGGTAGACCAT
TATGCTCCTTTGTTTATTCATTCAGTCGCAATGTCTGGGTGTTGTCATGATTAAATTTAAACCTTACTCTGCTCTAGCAG
CTCTTTGTTGAAACCATA--CCTATGGTCTTCCTTTTATTATAGAGAGGATAAAAAACAGAGGAAGGTACCATCTGTT-C
TTGGCAATATTTCTGTGTTTATTACATCTCACGTGCACTCTCAGATTGTGTTTTCCAGTATAGGAACTGAAAAAAATGTT
GTTTGATATGATA-GAGCTGAAAGCCGTATC---------------------ATCCTAGGCAGGTATTCCGTAACCTCTG
TCT----TACATGTTAAAA----TGATTGATTGAT----GACATACAAGGTTTGGTTAGGACCTGGAAGAAACAGTAGAC
G-----------TCT---------TATACATGTTAAATTGATTGATGATATATACAAGGTTGGGTCGGACCGGACCTGGA
AGAAACAGTAGGAAGGTA--------------------------------------------------------------
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-----------------------------ACCCGTAATCTCCGTCTTATACATGTTAAAATGATTGATGGTATATATACA
AGGTTGGGTCGGACCGGACCTGGAAGAAACGGTAGGAAGGTAACCCGTAACCTCTATCTTGCATGTTGAATAGATTGGGT
AGGACATTGGAGATACAGCTAACATTACAGGATATTTGGTTTCTGAATGCCCAGTCTTGTACCACATTTAATTTGCAGTG
CCAGTACATATTTTGTGTGTACTGCGCCAGACATTTCTTGATATAGATTTTAAGAAATGACGTTGACTAGTATCTGCATT
AGTAGGTGTATCATTCAATCGTTAAACACGAGGATGGTATTTCTTTCAGTCTAGGAACTGGAAAATTGTTGTGCGATAGA
GCTGAAAGTCTTGAGATGATGATAGCACTATCATCCTAGGCAGCAGGTATTCCGTAACCTCTGTCTGTCTGTCTTACATG
TTAAAATGATGTACGCTGGACCTGGAAGATACAGTAGGCAGGTAACCCGTAATCTCTGTCTTGCATGCTAAATTGATGAC
GTATAGAAGGTTGGGTGGAATGTGGAAAATTCAGGTAACATTATAGGAGAGCGGTTTCTGAATGCCTAGTCTTGTAC---
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>SNPs
------------------S------S-----------S----------------------S-------------------
-------------------------------------------------S-S-------------------S-S-----S
---------S----S--------S--------------------------------------------------------
---------------------S-------------S-SSSSSSSSSSS-S----S----S--------------------
----------S---S---------------S----------SSS------------------------------------
--------S-------SS------S-------------------------------------------------S-----
----------------------------SS-------S-----SS--S--------------------S---S-SSS---
----SSSS--S----S-S------S-------------------SS-S-------------S-----S----S---S-S-
-----------S---------------------S--------------------S----S--SSS-S---SS--------
--S--SS--S------------------------------------S--SSS----------------------------
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----------------------------------------------------------S------------SS-------
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---------SSSSSS---------------------S-------------------------S-SS---S-----S----
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SSSSSSSSSSSSSSSSSS----------------------------S-----
>forward_287
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---------------------------TGGACCACCAGCGATCTCTA---------------------------------
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------------------------------------TACACAGACATGGTGGTGCT------------------------
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--------------------------------------------GAGAGGCTGGTCTGTGTTCC----------------
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-------------------------------------------CGGAGGTAGAGGGTCAGACT-----------------
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---------------------------CGTTGGCGTGCTTTCGATAG---------------------------------
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-----CGGAACGGAGGGAGTACAAG---------------------------
