>input_sequence_46041
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-------------ATGGACGCGGCGGCGCCGTCGCGGCGCGCGGGGCCGAGGCGGGACAGGCCCCTCATCCCCCCCAACT
ACGTCAGCCTCCGGGACCTCCAGGGGCTCCGCCTCAAGGAGAAGGCCGAGCGGCGGCGGCGCCAGGAGGCGGAGGAGGCC
GCCGCCAGGAGGGAGGCCGAGGAGGAGGAGCAGGAGCGGCGGCTGCGGAAGGAGGCGGAGGCGGAGGCCTCCGCGAGGAG
GGCCAAGGAGGAGGAGGAGGAGCGGCGGCGTCAGGGGGAGGAGGAGGCCGCCGCGGCGAGGAGGGTTAGGGATGCGGCGG
CGGCGGCACCTAGGGTGGAGATGAAGGGCT---CCTCCTCGTCGCGCGCCCCCTTCAGGTATAATGAGAGGCCC------
------CGCGTGGTGGTCGTGGCGCATCGCCCGCCGCCGCCGCCACGCGGGGAGGGTTCGGCCGTGAATGGTGGCGGCGC
CGGC---GGCAGGAAGGGGCCGGGCGGCGACGCGGCCGATGGAACCCTAGGCGGCGGAGGTGGAGGCAAGGCGCGGGATG
AGGGGATGGGGAAGGCCTCCGTGGGATTGGTTGCCGGTCCAGGCGACCCAGCCGAGCCAGCTACCGGCGGCAAGCTGGAG
GAGAAGGGTAATGGGGAGGCCTCTGGATGTCAGGGCACGGCATTGGGGACGAGTGGCTTGCCAGGCGAGCTGGCCGAGGC
GGATACTGCATCATACCGAGGCACCGTCAGGCCCAGGTACAAGCACAAGGGGAAGAAAGGTTTCGATGGCCGGAGCACAG
AAACAGCCATGACCGGCTCATTGGTTGAAGCGGTAACGGCATCACCACCGCGAGTCGTCGATCTGGATAACAAGGGGAAG
GCTGGATCGAGTAATCAGAGCACTGGGAAAGCTTCGGCAAGCTCACAGGGCGAGGCAGCTGATGATTCACCACTGCAGGG
AGTCAAGTCGGTTAACAAGTGGAAGAAGAAGAATAAACCCTCAGGAGGAAGGCAGGCAGGCGCAGCACCTGGCGGCGATT
GGCCGAACGGGAGGAGGGACCAGCCACGGCC---------GGGCAGCCGCGGCCGGAGGAACGGCGATGGTCAAGGAACC
ATCTGGGAAGTAAAATCCGATGGCCTTGGGGGAAAGCAGCCGGAGGTGGAGGGGAAGGCCCACTCGCATCCGCCCACTGA
GAGCAGCAGCAACAGAAGGAGGGGCAGTGGTCAAGGAATGATCAGGAAAGCAGAATTTGAGGACTTTGGGGAGAAGGAGC
CGCTGGTTGAGATGAGGGCGCAGCCGCATACAGCTGCTGACAGCAGTAGCTATCCAACAAGTAGCCGTGATCAAGGAATG
AACAGGAAGGCCAAATCCGAGGACTTTGGGGAGAAGCAGGTGGTGGCCGAGATTAGAGCGCAGCCGCATCCGGCTGCTGA
TAGCAGTATCAATCGAAGGAGCAGCAGTGGTCAAGAGATGAACCAGGAGGCAGATTCCAATGGCTTA---GAGAAGCAGC
CAGTTGTGGAGATGAGAGCCGTGGCCCAGCAGAAGCCATGTGATGCGAGGATCTTCCATGGGCGGCGGCGCCCTGGTGAT
CACAGCCGAGCGAATGGAGCCGCAAGGCAGCAGGGCTGCATCTGGGTGCCCAAGGCTGCTGCTGTCCCAGTCCGCACCGA
AGTCGGAAACATTCCGTAG-------------------------------------------------------------
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----------------------------------------------------------------------
>chr3B_1_TraesCS3B01G281800
GCCACACATCTTGTTCATGTGCATGCAACCGACCATGCATGGTATAATGACCAACTCATCCTCATCGCAAAGTTGGCATC
CACACATCTTTTGTCGACTTGGCTGTAGGAAGGGCGGTATCAACGTTCAATGAAGCAAGGGGAGAGGGCGTAGTTGCGT-
GCGGGAACTAGATAGAAGGATATAACAGCCAAGGGCGATGG-GGCTGGCGGGAGGGTGG-GCCCTCATGGCTAGACCGAG
GAGTGTGGCAGATCAAGGGCCACTGCACGAAAACGGAACGTGAT-ATTGATTGCTTCTCGGTTGAAAACCATATTGCGGC
GCCAACTACAAACTGATGCATGCACGAACCAACTACGGAGAGGGGATGCCCGTTCGTATGATCTAGGAGCGGTTTTCCTA
TACGACTGCCATTTAGAAAAAAGGCATCAATCAAACCGGCGC--------------------------------------
--------------------------------------------------------------------------------
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----------------------------CTTTATTGCACGGGGCGGGCTCACGATTTTTTGTAAAAAGCATGTGTGCCTG
GTATCTTAGGGTTTACATAGAGGAACTAGGATGAGGTGTGAAATCATGAATAAACCGCCACCACCGATTTCCTATATACT
CCCTCCGTCCCTGAACATAAGTCTTTCTAGAGATTCTGATAATCCATATCGTACGGAGCAAAACGAATGAATCTTCACTC
CAAACCACGTCTATATACATCTGTATGTATCCCATATTAAAC-------------TTGTAGTATTTAGGAAT-------G
AGTAGTAAATACCATGGTCCACAGCACAAGCCAGAGC--TGTACTGTGCCATGTGTCCCATG---CCTGAATCTTC-TCG
TGGGGTTGACTGAAGTTTCTGAAGCCGGTGGGGCCAGAAGACGCGGCAGGCCCACAGTTTCAACGCTACAAAACCACGCG
GGTCA--------------------CGGGAATATTTTCTTT----------CT-TTCCTCACCGAGGAAGGAGAACCAGA
AAAATAAAATAATATTGGTACTAGCTCCAACTCGTAACGCCAGTCCTT--TCCCCCTT-GCGGCGACCGCCGGAGAGGAG
AGGA---GAGGGGATGGACGCGGCGGCGCCGTCGCGGCGCGCGGGGCCGAGGCGGGACAGGCCCCTCATCCCCCCCAACT
ACGTCAGCCTCCGGGACCTCCAGGGGCTCCGCCTCAAGGAGAAGGCCGAGCGGCGGCGGCGCCAGGAGGCGGAGGAGGCC
GCCGCCAGGAGGGAGGCCGAGGAGGAGGAGCAGGAGCGGCGGCTGCGGAAGGAGGCGGAGGCGGAGGCCTCCGCGAGGAG
GGCCAAGGAGGAGGAGGAGGAGCGGCGGCGTCAGGGGGAGGAGGAGGCCGCCGCGGCGAGGAGGGTTAGGGATGCGGCGG
CGGCGGCACCTAGGGTGGAGATGAAGGGCT---CCTCCTCGTCGCGCGCCCCCTTCAGGTATAATGAGAGGCCC------
------CGCGTGGTGGTCGTGGCGCATCGCCCGCCGCCGCCGCCACGCGGGGAGGGTTCGGCCGTGAATGGTGGCGGCGC
CGGC---GGCAGGAAGGGGCCGGGCGGCGACGCGGCCGATGGAACCCTAGGCGGCGGAGGTGGAGGCAAGGCGCGGGATG
AGGGGATGGGGAAGGCCTCCGTGGGATTGGTTGCCGGTCCAGGCGACCCAGCCGAGCCAGCTACCGGCGGCAAGCTGGAG
GAGAAGGGTAATGGGGAGGCCTCTGGATGTCAGGGCACGGCATTGGGGACGAGTGGCTTGCCAGGCGAGCTGGCCGAGGC
GGATACTGCATCATACCGAGGCACCGTCAGGCCCAGGTACAAGCACAAGGGGAAGAAAGGTTTCGATGGCCGGAGCACAG
AAACAGCCATGACCGGCTCATTGGTTGAAGCGGTAACGGCATCACCACCGCGAGTCGTCGATCTGGATAACAAGGGGAAG
GCTGGATCGAGTAATCAGAGCACTGGGAAAGCTTCGGCAAGCTCACAGGGCGAGGCAGCTGATGATTCACCACTGCAGGG
AGTCAAGTCGGTTAACAAGTGGAAGAAGAAGAATAAACCCTCAGGAGGAAGGCAGGCAGGCGCAGCACCTGGCGGCGATT
GGCCGAACGGGAGGAGGGACCAGCCACGGCC---------GGGCAGCCGCGGCCGGAGGAACGGCGATGGTCAAGGAACC
ATCTGGGAAGTAAAATCCGATGGCCTTGGGGGAAAGCAGCCGGAGGTGGAGGGGAAGGCCCACTCGCATCCGCCCACTGA
GAGCAGCAGCAACAGAAGGAGGGGCAGTGGTCAAGGAATGATCAGGAAAGCAGAATTTGAGGACTTTGGGGAGAAGGAGC
CGCTGGTTGAGATGAGGGCGCAGCCGCATACAGCTGCTGACAGCAGTAGCTATCCAACAAGTAGCCGTGATCAAGGAATG
AACAGGAAGGCCAAATCCGAGGACTTTGGGGAGAAGCAGGTGGTGGCCGAGATTAGAGCGCAGCCGCATCCGGCTGCTGA
TAGCAGTATCAATCGAAGGAGCAGCAGTGGTCAAGAGATGAACCAGGAGGCAGATTCCAATGGCTTA---GAGAAGCAGC
CAGTTGTGGAGATGAGAGCCGTGGCCCAGCAGAAGCCATGTGATGCGAGGATCTTCCATGGGCGGCGGCGCCCTGGTGAT
CACAGCCGAGCGAATGGAGCCGCAAGGCAGCAGGGCTGCATCTGGGTGCCCAAGGCTGCTGCTGTCCCAGTCCGCACCGA
AGTCGGAAACATTCCGTAGACAGGAAGTATATA---TAGTAATATGTGGTAACATGCGCCAGTGGTAGATTTCCAACAAG
TGAAGGTGCTAAATCCTATCTATAAGTAGAATATAGGTG---------------------------------TTTGAGAT
TGCCAAATTGGTTTGCCGGGCTTTATTATCACC-AGATTGGTTTTCGGGTAATAAAC--ATTGTAATCCCTGTAGATTCC
TGCTGTAATTAAATCGTTGTAATTTTTTGGTGGGAATTTGCCAAGATCCTTGCTTTCCAAACAGATTGCATTAACAAAAA
AGTGTGGCATTGCAGGTGAGGATGGTTAATTAGAATTGACTTGTATCTGCAATAAATTGACTGGTCATTGTGAAAATTTA
CCGACTGATGCACAATTCAACTGTGAAAGAACGAAGCCTGTTTCCTCAATTCAATTCCTCATGTTACTGAGTGAATGGCG
CCGCAAGGCAGCACTGCGGCGTCTGGGTGCCCA------CTGCTGTCCCAGTCCGCACCGAAGTCGGAAACATTCCGTAG
ACAGGAAGTATATATAGTAGTA--ATATGTGGTAACATGTGCCAGTGGTAGATTTTCAAGTAATGAAGGTGCTAGCTCTT
ATTTATATAGATATGAAGTGC---------ATAGGTGTCCATGTAGGGTTTGTTGGCTTTGAGATTGTCAAATTGGTTTG
CTGGACTTAGCTATTGCCAGATTGGTTTTAGAGTAGTACTGTAATCTATGTAGATTCCTGCTGCAATTAAATCATTATCA
TTTTTTTGTGAAACTGGCACAAGATTCTTGGGTTCCAAACAGATCGCATAAACAAAAAGGCATGGAATTGCAGGTGAGGA
TGGTGAACTAGAATTAACTG----------------------------------ATTTACTGACTGATGCATGTTTCCTC
AATTCAATTCCTCATGAAACATATACATTCTGCTGTTTCTGGTT-TACTAACTGATGCCTGTTTCCTCAATCCAATTCCT
CATGGAAGGTATACATCTGCTGTTGCCCGTCAGCAATAAAATCAAACTACAAGGTGTTTGTGTTCTGCTA
>chr4A_114
--------------------------------------------------------------------------------
---------------------------------GCGGTACCAACATTCAA-GAAGCAAGGGGAGAGGGACGCAACTGCAC
GCGGGAACTAGATAGAGGGATATAACAACCAAGGGCGATGACGGCTGGCGTGAGGGTGGAGCCATCGTGGCTAGACCGAG
GATCGTGGCAGATCAAGGGCCACTACATGGAAACGGAACGCGATCATTGATTGCTCTTGGTTGGAAAACCATATTGCGAT
GGCAACTACAAACTGATGCATGCGCGGACCAGCTAGGGAGAGGGGATGCCCGTTCGCATGATCTAGGAGCGGTTTTCCTA
TACGACTGCCATTTAGA--AAAGGCATCAATCAAACCAACGTCTTTTCTCAAATACGCACGAGCATGCGTATCATTCATT
AAAGAGGAGGGGGAAGAAGGGAAGAACCCCGAAGTAACCAATGTACACTGTGTATTTACATGCCGGCTATTCCGACACTA
CCAAGAAAACGAGAAAAGCTACTAGCCCGGAGCTGCCCACCTAACTACCTCTGCATTTTGGGCCACCTTGCCAAACAAGC
CTGCCTTGGTCCAGGCCTCCCATTCATCCATGATCCGCTGCTTGAGGAGAGCTACTGATGGCGTTATACCATTGAACACC
ACGTCGTTCCTGTGCTTCCAGAGCATCCAAAAGACTAGAAGAGAGGTTGCTCTTGTAGTTTTCAGGTTTATGGCCAGTAG
GTCCTGCCTGATACCATCAAACCAACGTCTTTATTGCACGTCGCGGGCTCACGGGGTTTTATAAAA-GCCCGTGAATCTG
TTATCTTGGGGTTTATGAAGAGCGGCGAGGATGAGGTGTGAAACCATGAATAAACCACCACCACCGGTTTCCTGAATACT
CCCTCCATCCGTAAACATAAGTCTTTCTAGAGATTCCGATATGGATTACA-TATGGAGCAAAATGAGTGAATCTACACTC
TGAACTACGTCTATATACA-----------TCCATATTAAAATCCTTAAAAAATATTTA--TATTTAGGAATAGTAGTAG
AGTAGTAAATACCATGGTCCATGGCACAGGCCAAAGCTGTGTAGTGTACCATGTGTCCCATACTACCTGAATCTGTATTG
TGGGGTTGACTGAAGTTTCTGAAGCCGGTGGGCAGAAGGT--GCGGCAGGCCCACAGTTTCAACGCCATAAAACCACACG
GGTCACGGGCGGTGGGGCGACGCGATGGGAATATTTTATTTTATTTTATTTCCCTTCCTCGCCG----AGGAGAACCAGG
AAAAAAAAATTA-----GTGTTAGCTCCAACCCGTAACGCCAGTCCTT--TCTCCCCCCGCGGCGATCGCCGGAGAGGAG
AGGAGCGGAGGGGATGGACGCGGCGGCGCCGTCGCGGCGCGCGGGGCCGAGGCGGGACAGGCCCCTCATCCCGCCCAACT
ACGTCAGCCTCCGGGACCTCCAGGAGCTCCGCCTCAAGGAGCAGGCCGAGCGGCGGCGGCGCCAGGAGGAGGAGGAGGCC
GCCGCCAGGAGGGAGGCCGAGCAGGAGGAGGAGGAGCGGCGGCTGCGGAAGGAGGCGGAGGAGCAGGCCGCCGCGAGGAG
GGCCAAGGAGGAGGAGG------------------------------CCGTGGCGGCGAGGAGGGTTAGGGATGCGGCGG
CGGCGGC---------GGAGATGAAGGGCTCCTCCTCCTCGTCGCGTGCCCCCTTCAGGTATAATGAGAGGCCC------
------CGCGCAGG---------------------------GCCGCGCGGGGAGGGTTCGGCCCTGAATAGTGGTGGCGC
CGCGGGAGGCAGCAAGGGGCCGGGCGGCGACGCGGCCGATGGAACCCTAGGCGGCGGAGGTGGAGGCAGGGCGCGGGATG
AGGGGAAGGGCAAGGCCTCTGCGGGCTTGATTGCCGG------CGACCCAGCCGAGACAGCTACCAGCGGCAAGCCGAAC
GAGAAGAGCAATGGGGAGGCCTCTGGATGTCAGGGCACCGCATTGGGGACGAGCAGCGTGCCAGGCGAGCTGGCCGAGGT
GGACACTGCTTCATACCGAGGCGGCGTCAAGCCGAGGTACAAGAACAAGGGGAAGAAGGGTTTCGATGGCCGGAGCACAG
AGACAGCCATGACCGGCTCTTTGGTTGAGGTGGTGAAGGCATCGCCACCGCGAGTCGTTGATTCGGAGAACAAGGGGAAT
GCTGGATCGAGTAATCAGAGCACTGGAAAAGCTTCGGCAAGCTCACAGGGCGAGGCAGCTGAGGATTCACCACTGCAGGG
AGTCAAGTCGGATAACAAGTGGAATAAGAAGAACAAACCCTCAGGAGGAAGGCAGGCGGGCGCACCACCGAGCGGCGATT
GGCCGAACAGGAGGAGGGACCAGCCTCGTCCGTCCGCTGAGGGTAGCCGCGGCCGGAGGAATGGCGATGGTCAAGGAGCC
GTATGGGAAGTAAAATCCGATGGCCTTGGGGGAAAGCAGCCGGAGGTGGAGGGGAAGGCCCACTCGCATCTGCCCACTGA
GAGCAGCAGTAACAGAAGGAGGGGCAGTGGTCAAGGAATGACCAGGAAGGGAAAATTTGAAGACTCTGGGGAGAAGGAGC
TGGTGGTTGAGATGAGGGCGCATCCGCATCCAGCTGCTGACAGCAGTAGCTATCAAAGCAGCAGCGGTGATCAAGGAATG
GCCGGGAAGGCAAGATCTGAGGACTTCGGGGATAAGCAGCCGGTGG----------------------------------
--------------GAAGGAGCAGCGGTGATCAAGGGATGAACCAGGAGGCAAAATCTGAGCGCTTCGAGGAGAAGCAGT
CGGCTGTGGAGATGAGAGCTGTAAAGACCTACCGTG---------------------------GGCAGCGGCCTGGCGGT
TGCAGCCGAGTGAATGGCACCACAAGGCAGCCCGGCAGCATCTGGGTTCCAAAGGCTGCTGCTGTCCCAGTCCGCACCGA
AGTCGGAAACATTCCATAGACAGGAAGTATATATAGTAGTAATATGTGGCAAGATGTGCCAGTGGTAGATTTTCGACAAA
TGAAGGTGCTAAATCCTATTTATAAATAGGAAGTGCATGTAGAATGTAGGTGCCCATGTAGGGCCGGCGGGCTTTGAGAT
TGCCAAATTGGTTTGCCAGACTTTGATATTTGCTAGATTGGTTCTGCGGTAATAAAAATATTGTAATCTCTGTAGATTCC
TGCTGTAATTAAATCATTGCAATATTTTGGTGGAATTTGCACAAGATCCTTGCATTCCAAACATATTGCATAAACAAAAA
GGCATGGCATTGCAGGTGAGGATGGTGAATTGGAATTGACTTGTATGTGCAGTACATTCACTGATCATTGTG-AAATTTA
CTGACTGATGCAGAGTTCAACTCTGAAAACT-GAAGCATGTTTCCTCATTTCAATTCCTCATGTTACTTAGCGAGTGGCG
CCGCAAGGCAGCACTGCGGCATCTGGCTGCCCATGGTTACTGCTGTGCTGGTCCGTTACGAAGTCGGAAACTTTCCATAG
ACGGGAAGTATATTTAGTACTAATATATGTGGTAACATGTGCCAGTGGTAGATTTTCAAGTAATGAAGGTGCTAGATCTT
TTTTATAA--ATATTAAGTGCATGTAGAATATAGGCGTCCATGTAGGGTTTGTGGGCTTTGAAATTGTCAAATTGGTTTG
CTGGACTTAGCTATTGCCAGATTGGTTTTAGAGTAATATTGTAATCTCTGTAGATTCCTTCTGCAATTAAATCATTGTCA
TTTTTGTGTGAAACTGGCACAAGATTCTTGGGTTCCAAACAGATCGCATAAACAAAAAGGCATGGAATTGCAGGTGAGGA
TGGTGAACTAGAATTAACTG----------------------------------ATTTACTGACTGATGCATGTTTCCTC
AATTCAATTCCTCATGAAACCTATACATTCTGCTGTTTCTGGTTTTACTGACTGATACCTGTTTCCTCAATCCAATTCCT
CATGGAAGGTATACATCTGCTGTTGCCAGTCAGCGATAAAATCAAGCTACAAGGTGTTTGTGTTCTGCTA
>chr4B_434
--------------------------------------------------------------------------------
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-------------------------------------GGCGC--------------------------------------
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----------------------------CTTTATTGCATGGTGCGAGCTCACATGGTTTTGTAAAA--------TGCCCG
CTATCTTAGGGTTTATGAAGAGGGACGAGGATGAGGTGTGAAACCATGAGTAAACCGTCACCACCGGTTCCCTAAACACC
CCCTCCGTCCCTAAACATAAG----TCTAGAGATTCAGATATGGATTACA-TACGAAGCAAAATGAGTGAATCTACACTC
TAAACTGCGTCTACATACATTGATATGCGGTCCATATTAAAATCTTTAAAAAGATTTGTACTATTTAGGAACAGTAAATA
CT------------------------------AGAGC--CGTCCTGTACCATGTGTCCCATG---CCTGAATCTTC-TTG
TGGGGTTGACTGAACTTTGTGAAGCCGGTGGGCAGAAGGT--GCAGCAGGCCCACAGTTTCAACGCCATAAAACCACACG
GGTCACGGGTGGTGGGGCGACG-----GGAATATTTTATTT----------CT-TTCCTCACCG----AGGAGAGCCAGG
AAA-AAAAATTA-----GTGTTAGCTCCAACCAGTAACGCCAGTCCTT--TTCCCCTT-GCGGCGATCGCCGGAGA----
-GGA---GAGGGGATGGACGCGGCGGCGCCGTCGCGGCGCGCGGGGCCGAGGCGGGACAGGCCCCTCATCCCTCCCAACT
ACGTAAGCCTCCGGGACCTCCAGGAGCTCCGCCTCAAGGAGAAGGCGGAGCGGCGGCGGCGCCAGGAGGCGGAGGAGGCC
GCCGCCAGGAGGGAGGCCGAGGAGGAGGAGCAGGAGCGGCAGCTGCGGAAGGAGGCGGAGGCGGAGGCCGCCGCGAGGAG
GGCTAAGGAGGAGGAGGAGG---------------------------CCGCCGCGGCAAGGAGGGTTAGGGATGCGGCGG
CGGCGGC---------GGAGATGAAGGGCTCCTCCTCGTCGTCGCGTGCCCCCTTCAGGTATAATGAGAGGCCC------
------CGCGTGGTGGTCGTGGCGCATCGCCCT---CCGCCGCCGCGCGGGGAGGGTTCGGCCGTGAATAGTGGTGGCGC
CGCGGGAGGCAGCAAGGGGCCGGGCGGCGACGCGGCCAATGGAACCCTAGGCGGCGGAGGTGGAGGCAAGGCGCGGGATG
AGGGGAAGGGGAAGGCCTCCGCGGGTTTGATTGCCGG------CGACCCAGCCGAGACAGCTACCGGCGGCAAGCCGGAG
GAGAAGGGCAAGGGGGAGGCCTCTGGATGTCAGGGCACGGCATTGGGGACGAGCAGCTTGCCAGGCGAGCTGGCCGAGGT
GGACACTGCTTCATACCGAGGCGGCGTCAAGCCCAGGTACAAGCACAAGGGGAAGAAAGGTTTCGATGGCCGGAGCACAG
AAACAGCCATGGCCGGCTCATTGGTTGAGGCGGTAACGGCATCGCCACCGCGAGTCGTTGATTCGGAGAACAAGGGGAAG
GCTGGATCGAGTAATCAGAGCGCAGGAAAAGCTTCGGCAAGCTCACAGGGCGAGGCAGCTGAGGATTCACCATTGCAGGG
AGTCAAGTCGGTTAACAAGTGGAAGAAGAAGAATAAACCCTCAGGAGGAAGGCAGGCAGGCGCAGCACCGAGCGGCGATT
GGCCGAACGGGAGGAGGGACCAGCCACGGCC---------GGGCAGCCGCGGCCGGAGGAACGGCGATGGTCAAGGAACC
ATCTGGGAAGTAAAATCCAATGGCCTTGGGGGAAAGCAGCCGGAGGTGGAGGGGAAGGCCCAATCGCATCCGCTCACTGA
GAGCAGCAGCAACAGAAGGAGGGGCAGTGGTCAAGGAATGATCAGGAAGGCAGAATTTGAGGACTTTGGGGAGAAGGAGC
CGGCGGTTGAGATGAGGGCGCAGCCGCATACGGCTGCTGACAGCAGTAGCTATCCAACAAGTAGCCGTGATCAAGGAATG
AACAGGAAGGCAAAATCCGAGGACTTTGGGGAGAAGCAGGTGGTGGCCGAGATTAGAGCGCAGCCGCATCCGGCTGCTGA
TAGCAGTATCAATCGAAGGAGCAGCAGTGGTCAAGAGATGAACCAGGAGGCAGATTCCAATGGCTTA---GAGAAGCAGC
CAGTTGTGGAGATGAGAGCCGTGGCCCAGCAGAAGCCGTGTGATGCGAGGATCTCCCATGGGCGGCGTCGCCCTGGTGAT
CACAGCCGAGCGAATGGCGCCGCAAGGCAGCAGGGCTGCATCTGGGTGCCCAAGGCTGCTGCTGTCCCAGTCCGCACCGA
AGTCGGAAACATTCCGTAGACAGGAAGTATATA---TAGTAATATGTGGTAACATGTGCCAGTGGTAGATTTTCAACAAG
TGAAGGTGCTAAATCCTATCTATAAGTAGAATATAGGTG---------------------------------TTTGAGAT
TGCCAAATTGGTTTGCCAGGCTTTATTATCACC-AGATTGGTTTTCGGGTAATAAAC--ATTGTAATCCCTGTAGATTCC
TGCTGTAATTAAGTTGTTGTAATTTTTTGGTGGGAATTTGCCAAGATCCTTGCTTTCCAAACACATTGCATTAACAAAAA
AGGGTGGCATTGCAGGTGAGGATGGTGAATTAGAATTGACTTGTATCTGCAATAAATTCACTGGTCATTGTGAAAATTTA
CCGACTGATGCA----------------------------------CAATTCAATTCCTCATGTTACTGAGTGAATGGCG
CCGCAAGGCAGCACTGCGGCGTCTGGGTGCCCA------CTGCTGTGCCGTTCCGTTCTGAAGTCGGAAACTTTCCATAG
ACAGGAAGTATATATAGTAGTA--ATAAGAGGTAACATGTGCCAGTGGTAGATTTTCATGTAATGAAGGTGCTAGCTCTT
ATTTATAA--ATATGAAGTGC---------ATAGGTGTCCATGTAGGGTTTGCGGGCTTTGAGATTGTCAAATTGGTTTG
CTGGACTTAGCTATTGCCAGAATGGTTTTAGAGTAATATTGTAATCTCTGTAGATTCCTGCTGCAATTAAATCATTATCA
TTTTTTTGTGAAACTGGCACAAGATTATTGGGTTCCAAACAGATCGCATAAACAAAAAGGCATGGAATTGCAGGTGAGGA
TGGTGAACTAGAATTAACTG----------------------------------ATTTACTGACTGATGCATGTTTCCTC
AATTCAATTCCTCATGAAACATATACATTCTGCTGTTTCTGGTT-TACTAACTGATGCCTGTTTCCTCAATCCAATTCCT
CATGGAAGGTATACATGTGCTGTTGCCCGTCAGCGATAAAATCAAACTACAAGGTGTTTGTGTTCTGCTA
>chr4D_697
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-----------------------------------------------------------AGTATTTAGGAATGGAGG--G
AGTAGTAAATACCATGGTCCATGGCACAAGCCAAAGC---------TACCATGTGTCCCATG---CCTGAATCTTC-TTG
TGGGGTTGACTGAACTTTCTGAAGCCGGTG-------------CAGCAGGCCCACAGTTTCAACGCTACAAAACCACACG
GGTCACGGGTGGTGGGGCGACGCGACGGGAATATTTTATTT----------CCCTTCCTCACCG----AGGAGAACCAGG
AAA-AAAATTTA-----GTGCTAGCTCCAACCAGTAACGCCAGTCCTTTCTTCCCCTT-GCGGCGATCGCCGGAGA----
-GGA---GA--GGATGGACGCGGCGGCGCCGTCGCGGCGCGCGGGGGCGAGGCGGGACAGGCCCCTCATCCCGCCCAACT
ACGTCAGCCTCCGGGACCTCCAGGAGCTCCGCCTCAAGGAGCAGGCGGAGCGGCGGCGGCGCCAGGAGGAGGAGGAGGCC
GCCGCCAGGAGGGAGGCCGAGCAGGAGGAGGAGGAGCGGCGGCTGCGGAAGGAGGCGGAGGCGGAGGCCGCCGCG-----
-------------------------------------------------------GCGAGGAGGGTTAGGGATGCGGCGG
CGGCGGC---------GGAGGTGAAGGGCA---CCTCCTCGTCGCGCGCCCCCTTCAGGTATAATGAGAGGCCCCGCGGA
GGGCCGCGCGTGGTGGTCGTGGCGCATCGCCCGCCGCCGCCGCCGCGCGGGAAGGGTTCGGCCCTGAATAGTGGTGGCGC
CGCGGGAGGCAGCAAGGAGCCGGGCGGCGACGCGGCCGATGGAACCCTAGGCGGCGGA------GGCAGGGCGCGGGATG
AGGGGAAGGGGAAGGCCTCCGCGGTTTTGATTGCCGG------CGACCCAGCCGAGATTGCTACCGGCGTCAAGCCGGGG
GAGAAGAGCAATGGGGAGGCCTCTGGATGTCAGGGCATGGCATTGGGGACGAGTGGCGTGCCAGGCGAGCTGGCCGAGGT
GGACACTGCTTCATACCGAGGCGGCGTCAAGCCCAGATACAAGCACAAGGGGAAGAAGGGTTTCGATGGCCGGAGCACAG
AAACAGCCATGACCGGCTCATTGGTTGAGGCGGTAAAGGCATCGCCACCGCAAGTCGTCGATTCGGAGAACAAGGGGGAG
GCTGGATCGAGTAATCAGAGCACTGGAAAAGCTTCGGCAAGCTCACAGGGCGAGGCAGCTGAGGATTCACCACTGCAGGG
AGTCAAGTCGGTTAACAAGTGGAAGAAGAAGAATAAACCCTCAGGAGGAAGGCAGGCGGGCGCAGCACCGAGCGGTGATT
GGCCGAACGGGAGGAGGGACCAACCCCGTCCAGCCGCTGAGGGCAGCCGCGGTCGGAGGAATGGTGATGGTCAAGGAACC
ATCTGGGAAGTAAAATCCGATGGACTTGGGGGAAAGCAGCCGGAGGTGGAGGGGAAGGTCTACTCGCATCCGCCTACTGA
GAGCAGCAGCAACAGAAGGAGGGGCAGTGGTCAAGGAATGATCAGGGAGGCAAAATTTGAGGACTTTGGGGAGAAGGAGC
CGGTGGTTGAGATGAGGGCGCAGCCACATCCGGCTGCTGACAGCAGTAGCTATCCAACAAGTAGCCGTGATCAAGGAATG
AACAGGAAGGTCAAATCTGAGGACTTTGGGGAGAAGCAGGCGGTGGCCAAGATGAGAGCGCAGCCGCATCCGGCTGCTGA
TAGCAGTATCAATCAAAGGAGCAGCAGTGGTCAAGAGATGAACCAGGAGGCAAATTCCATTGGCTTA---GAGAAGCAGC
CAGTTGTGGAGATGAGAGCCGCAGCCCAGCAGAAGCCATGTGATGCGAGGATCTCCCATGGGCGGCGGTGCCATGGTGGT
CACAGCCGAGCGAATGGCGCCGCAAGGCAGCAGGGCAGCATCTGGGTGCCCAAGGCTGCTGCTGTCCCAGTCCGCACCGA
AGTCGGAAACATTCCGTAGACAGGAAGTATATATAGTAGTAATATGTGGTAACATGTGCCAGTGGTTGATTTTCAA----
--------------------------------------------------------------------------------
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-----------------------------------------------------------GTAATGAAGGTGCTAGCTCTT
ATTTATAA--ATATTTAGTGC---------AAAGGTGTCCATGTAGGGTTTGCGGGCTTTGAGATTGCCAAATTGGTTTG
CTGAACTTAGCTATTGCCAGATTGGTTTTAGAGTAATATTGTAACCTCTGTAAATTCCTGCTGCAATTAAATCATCATCA
TTTTTTTGTGAAACTGGCACAAAATTCTTGGGTTCCAAACAGATCGCATAAACAAAAAGGCATGGAATTGCAGATGAGGA
TGGTGAACTAGAATTAACTTGTATGTGCAATGCATTTCACTGATCTTTGTGAAAATTTACTGACTGATGCATGTTTCCTC
AATTCAATTCCTCATGAAACATATACATTCTGCTGTTTCTGGTT-TACTAACTGATGCCTGTTTCCTCAATCCAATTCCT
CATGGAAGGTATACATCTGCTGTTGCCAGTCAGCGATAAAATCAAGCTACAAGGTGTTTGTGTTCTGCTA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S----S-----S-----------------SSSSSSSSSSS-
----------------S----------S------------S---------S------------S--S-------------
--SS--------------------S--S-S----------S--------------SS-S-S-S---------------SS
-S---------------------S--S----S---S--------------------S-----------------------
-----------------SS-------------------------------------------------------------
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-----------------------------------------S-----------SSS----------S--SS---------
S--------------SSS-----S--S----------------S----------------------S-------S-----
------------S-----------------------S----SSSSS--SSS------------S--S-------S-----
S----S--------------SSS----SSSS----------S--------------------------------------
---------------------SS------------------------S------------------------------S-
--------------------------------SSS-SSSSSS-----------------------------------S--
-------------------------------------S--------------------------SSSS-----------S
----S-----S-SSSSS--S-----------S----------------------------------S-------------
------------------------------------------------------------------------S-------
------------------------S-------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------
-------SSSSSSSSS----------------------------------------------------------------
--------------------------------------------S------------------------S----S-----
--SS--------S-------------------------------------------------------------------
------S--------------S---S---S-------SSSSSS-------------S------------------S----
--------S----------------------------------------------------------------------S
---S-----S------------SS-----S--------------------------------------------------
----------------------------S--------------S------------------SS---S------------
--------------------------S-----------------------------------S-----------------
---------------------------------------------------------------------SS---------
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------------------------------------------------S-------------------------------
--S-----------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------S---------------S-------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
---------------------------------------------------------------S----------------
--S-----------------------S-------------------------------S---------------------
------------S-S-------S-----SSSS-----S------------------------------------------
----------------------------------------------S--S-----SS--------------S----S---
--------------------------------------------------------------------------------
-------SSS-------------------------------------------S--------------------------
-----------------------------------S--S--------S--------------------------------
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----------------------------------S-----------------------------------
>forward_31
-----------TGTTCATGTGCATGCAACCG-------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_2089
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TAATGGGGAGGCCTCTGGAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_1360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ACCGAGGAAGGAGAACCAGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_2383
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TGATTCACCACTGCAGGG
AG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_2269
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGACCGGCTCATTGGTTGAA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_3443
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TGTGGCATTGCAGGTGAGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
