>input_sequence_45990
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----------------------------------------------------------------------ATGGTTGTGG
AAGAGGCGATGGATGGCGACATGAGCTTGTCGAACATGGTGCTGAGCTTCCTGGAGGAGGGAGAGACGGAGAGGTGGCCG
GAGAACGACGAGGAAGACGACGAT---GAGGAGGGATCCAGCGGCGGCGGTTCCGCCGAGAGCAAGGCCTTCTGGCGCGC
CCAGCACTCGCAGCTTCACGTAAGTTTTCCTCCTCCGTTCCGTAGCCAATTC----------------------------
------GTGTGATCGCACGCGAGTCCTGACGGGAGAGACGCCATGTCTGCTTGCAGGAGGCTTTGGGCAAGACCAGCACG
GCCGAGAGCAGGATCCGGGCGGTGACGGAGGAGGCCGTGGAGAGGATGCGCGCCCCCGCGGGGGCCGGGGCCGTCTGCTC
CTGCGCGAGGCGGGCGGCGGCCGGTGACTGCCGGAGCTGCATGCTGCGGCACGTCGTGGAGCGGCTCCGCGACGCCGGGT
ACAACGGCGCCGTCTGCAGGTCCAAGTGGGCGCGGTCCCTGGATATCCCCTCAGGTAACTGGTTGCTTTCGAGACACAGT
GGTTGGGTTCCTCCTAAGATAATCTTCAGACGGCG------TAATTAATTTAGTGAAAGAGCTGGCTGTTCAGTTCCAGC
AGAAAAGTGCATGCCCGGTTGGC------CTGTAAACCGTGTGGTCTAG----GGACGTCTGACCCGTCGTGCCGATTCG
AGGGATCCGTGTTTTGATCCTTCTGAATTCTGATGAAGTGTTCTTCGTTTTGTTGCGCTGTTTAGAGTTGATGA-ACGCC
GGAAGCATATTCGCCTACTAACCATAG---TAGTAGAACTTCTCGTTAAAGAAGTGGGTAAGAAAAAGTAGTAGTAGCAA
CTTGTCATATTCG-CCTACTAACCATAACCATAGTACTA---GAACTTTAAATTAAAAGTGTGTGGGAAAAGGATGTAGT
AGTAACTTGTCAA-------------------------------------------------------------------
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---------------------------------------------------------------TTCTAAAAAATGTCACA
TGCATGCCTCACATGGACCTGGTCATCCTACGCCCAAAGAAACGGACGCTTCCAAGTAAATTAGTGTCAGGCACCCGTCG
CCGTCTCCATTATTTCCTGGCCGCCCGTGACATGAACTTGCATTGCACCTATCCCGACCAGACCAGTCGACCAGATGTTA
TTACACCACGTTTAAG-----------AACACTTCCAAAACCGCACGACAAAACGACACATGCCAACCCGAAAACCGCAC
GTCGTCTGCTAAGCAAAAAGTTTGGTGTCGATCGAAGCTGACGTTTTCCTCCCTGGTCGATCTGTGACGTGCAGGCGAGC
ACAGCTACGTGGACGTGGTGCTGCAGACGCGGAGCGGCAAGGCGGCGCGGGTGGTGGTGGAGCCGAGCTTCCGGGCCGAG
TTCGAGGTGGCGCGCGCCGGCGGCGGCTACGGCGCGCTGGTGGCCGCGCTCCCGGAGGCGTTCGTCGGCCGCGCCGACCG
GCTGCGCGCCGTCGTCAAGGCCATGTGCGCCGCCGCCAAGCAGTGCATGAAGGAGAACAACATGCACCTGGGCCCCTGGA
GGAAGCACAAGTACATGCAGTCCAAGTGGCTCGGCACCTCCGAGCGGGAGGCGCCGCCGGCGCTCGACGCGGTGGCCGCC
GGCTCGCTGCCGCCGCCGGAGAAGCAGCCCAAGTTCAGGGCGTCCATGCTGAGCTTCGACTTCGGCCGGGCCCCGGTGGT
GGTCGCGTGA----------------------------------------------------------------------
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------------
>chr3A_1_TraesCS3A01G274100
CGGTGATGTTTACTTTGCCCTGTGATTAGGGTTCTTTGGGAGGGGAAAAGTTCTGTGATTTCTTTACTACCCGGAACATC
TAAGCCTAGAACAGCTCTGACACCATTGATAGGTTCTTTGGATCGGGTAGGCTAGATTAGATCGGTAGTATACCTTCTCC
TTGGCTCGATGAGCTCGAGCTGATGGCCATGGTGGAGGGCGACGGTGATGACGGTGAGTGGGCAGTAGCGGCAGAGGTTC
CCGTCACTACAGGGCTAACCTAGATCGGTAGGTTTTGTCGGTGGGGCTAGCGGCTGCGCGACAAACCTCGTAGTGCGTGC
CCCGTCCCCCTCCTCTTTATATAGCCCAGCGCGATAGGGG-CCGTCAACCATAGTGGGTTGGGTGCCTCCGATCAAGGCA
TGGATCTAAGGGCCCGGTGGGCCGTTGGACCCACACGGGAAGAGATCAACCTAACAAACGGTGCTATCTGGATAATACTG
C---------CATGCGCTCCGAACAACTCGCTCGGTCTGAAAATACTTATTGAAGAAATGAATATATCTAGACGTATTTT
AATTCTAGATACATTCATTTTTATCCATTTCTGCGACTAGTCTTACACACGAAGGAAGTATTTGTCTTGGATGTGGCAAG
CGTTACGAAACGGACGGCTCGACGTCGCGCGCATAGAATCCGGCTTGGTCCCTGACGTGGATCCGTGCTGTTCCCGTGCG
CCAACCAACAACCCGGCCCCACTA-----------ATCCCGTCTCCGATCGTCTCATCTTCATCACAGGCCCCACCCCAA
CAGTACCACCACCCACAGCTTCACCGCTGCCCATTCTCCACGTCCGCCCGACACTCCCGGCGGCCCGTATTTATAGCCAC
CCCGGGGTGGAAGGGGTCGGATCAGAGCACCGTTGAGCTAACATCTGAACAGCACAGAGAAAG---------GATCACAC
ACCCAGCTGGTGGCGATCAAGCAGCCAGCCAAGAGATCACAAGCCCAAAGCACACAGACATACACTCAGAATGGTTGTGG
AAGAGGCGATGGATGGCGACATGAGCTTGTCGAACATGGTGCTGAGCTTCCTGGAGGAGGGAGAGACGGAGAGGTGGCCG
GAGAACGACGAGGAAGACGACGAT---GAGGAGGGATCCAGCGGCGGCGGTTCCGCCGAGAGCAAGGCCTTCTGGCGCGC
CCAGCACTCGCAGCTTCACGTAAGTTTTCCTCCTCCGTTCCGTAGCCAATTC----------------------------
------GTGTGATCGCACGCGAGTCCTGACGGGAGAGACGCCATGTCTGCTTGCAGGAGGCTTTGGGCAAGACCAGCACG
GCCGAGAGCAGGATCCGGGCGGTGACGGAGGAGGCCGTGGAGAGGATGCGCGCCCCCGCGGGGGCCGGGGCCGTCTGCTC
CTGCGCGAGGCGGGCGGCGGCCGGTGACTGCCGGAGCTGCATGCTGCGGCACGTCGTGGAGCGGCTCCGCGACGCCGGGT
ACAACGGCGCCGTCTGCAGGTCCAAGTGGGCGCGGTCCCTGGATATCCCCTCAGGTAACTGGTTGCTTTCGAGACACAGT
GGTTGGGTTCCTCCTAAGATAATCTTCAGACGGCG------TAATTAATTTAGTGAAAGAGCTGGCTGTTCAGTTCCAGC
AGAAAAGTGCATGCCCGGTTGGC------CTGTAAACCGTGTGGTCTAG----GGACGTCTGACCCGTCGTGCCGATTCG
AGGGATCCGTGTTTTGATCCTTCTGAATTCTGATGAAGTGTTCTTCGTTTTGTTGCGCTGTTTAGAGTTGATGA-ACGCC
GGAAGCATATTCGCCTACTAACCATAG---TAGTAGAACTTCTCGTTAAAGAAGTGGGTAAGAAAAAGTAGTAGTAGCAA
CTTGTCATATTCG-CCTACTAACCATAACCATAGTACTA---GAACTTTAAATTAAAAGTGTGTGGGAAAAGGATGTAGT
AGTAACTTGTCAA-------------------------------------------------------------------
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---------------------------------------------------------------TTCTAAAAAATGTCACA
TGCATGCCTCACATGGACCTGGTCATCCTACGCCCAAAGAAACGGACGCTTCCAAGTAAATTAGTGTCAGGCACCCGTCG
CCGTCTCCATTATTTCCTGGCCGCCCGTGACATGAACTTGCATTGCACCTATCCCGACCAGACCAGTCGACCAGATGTTA
TTACACCACGTTTAAG-----------AACACTTCCAAAACCGCACGACAAAACGACACATGCCAACCCGAAAACCGCAC
GTCGTCTGCTAAGCAAAAAGTTTGGTGTCGATCGAAGCTGACGTTTTCCTCCCTGGTCGATCTGTGACGTGCAGGCGAGC
ACAGCTACGTGGACGTGGTGCTGCAGACGCGGAGCGGCAAGGCGGCGCGGGTGGTGGTGGAGCCGAGCTTCCGGGCCGAG
TTCGAGGTGGCGCGCGCCGGCGGCGGCTACGGCGCGCTGGTGGCCGCGCTCCCGGAGGCGTTCGTCGGCCGCGCCGACCG
GCTGCGCGCCGTCGTCAAGGCCATGTGCGCCGCCGCCAAGCAGTGCATGAAGGAGAACAACATGCACCTGGGCCCCTGGA
GGAAGCACAAGTACATGCAGTCCAAGTGGCTCGGCACCTCCGAGCGGGAGGCGCCGCCGGCGCTCGACGCGGTGGCCGCC
GGCTCGCTGCCGCCGCCGGAGAAGCAGCCCAAGTTCAGGGCGTCCATGCTGAGCTTCGACTTCGGCCGGGCCCCGGTGGT
GGTCGCGTGACGCGTGCATGGCGT--------CAAGAGGGGTATGATGCCATGGTGTCACGTGTATGTGCCCATGTTATT
ATAGACCGTATGCCGTATGCCATGCCGGGCACTGTAGAAGGCCATAGTAGTACTTCCTCCGTAAACTAATATAAGAGTGT
TTAGATTACTAAAATAGTGATCTAAACGCTCTTATATTAGTTTACAGAGGGAGTACTTGTTAGTAGAGTGTGTACCGGGG
ATTGTAGGTTGTGCGTAGTCAGGATTTGTAATTTCTTGAATCTTCTGCTCTTGAAGAAGAGAAATCCGTTGATGGAGATG
AGAGTAAAAAAGT-------------------------------------------------------------------
--------------------------------------TATCTAGTTTTCACAAACCACAGGCTAATTTTCATCCCTTAA
CTTTACAACCAAACAAACCAGGCAACTAGGGCGGAGCACATCCCCTCAACCTCTGCCTACCGCTCCGGCAGCTGGTGGCG
GGGAGGCAGCTCTAGCTAGTAGATAGGTTAGGGTTAGGTCTTTGCGGAGGCGGCACTCGGCGGATGACAGATCATCGTTG
TCAAAATGGTCTTCCTGCCTCCA--ATGCACCTTGAATTCGTCCATCGGGACAAAGATGACCGAGCTCCTTCATAGATCC
ATGTCATTACCTCAGGGTGGTCAAGGTTAGGGTTACTTGTTGTGTGTTTGCATGAGCGAGATCTGATG-------TTAGG
TACTGCAGATTGATTCAAGGGTTCAACGGTGGCAACAACGGCTTTGGGGTGCCTGTTCTCAAGGGCACGTGCTCGAAGAC
TTCTCAGTTGTCATCGACAAGATTAGGCCTGCTCCGATATGGCAACAACGAAAACAACATGTCATTAGCTCATCCTGGTG
GTGACGGTAGTGGTCTAGGGATCTCAGTGTAATTTTTATTATATTGAGGGTGTATTTGTATTTCGGATGAATCTTTATAA
AAGATTCAAGTCCTTTTCAGAAAAAGAACACGTCGTTCATCACAAACTTAACTACAAATAGAAAGATAGAAAGCTATTTT
TAGATAGAAAGA
>chr3D_3
--GTGATGTTTACTTTGCCCTGTGATTAGGGTTCTTTGGGAGGGGAAAAGTTCTGTCATTTCTTTACTACCCGAAACATC
TAAGCCTAGAACAACTCTGACACCATTGATAGGTTCTTTGGATCGGGTAGGCTAGATTAGATCGGTAGTATACCTTCTCC
TTGGCTCGATGAGCTCGAGCTGGTGGCCATGGTGGAGGGCGA-GGTGATGACGGTGAGTGGGCAGTGGCGGCAAAGCTTC
CCGTCACTGCTGGGCTAACCTAGATCGGTAGGTTTTGTCAGTGGGGTTGGCGGCTGCACGACCAACCTCGTAGTGAGTGC
CCCGGCCCTCACCTCTTTATATAGCCCAGCGTGACAGGGGCCCGTCAACCATACTGGGTTGGGCGCCCCCGATCAGGGCA
CGGATTTAAGGGCCCGGTGGGCCGTTGGACCCACACGGGAGGAGATCAACCTAACAAAGGGTGCTATCCAGATAATACTA
TCATACGTATCATACGCTCCGAACTACCCCCTTCGTCCGAAAATATTTGTCGGGAAAATAAATATATCTAGACGTGTTTT
AGTTCTAAATACATCAATTTTTATCCATTTCTGCGACTAGTCTTCCACACGAAGGAAGTATTTGTCTAGTCTGTGGCAAG
CGTTACGAAACGGACGGCTCGACGTCGCGCGCATAGAATCCGGCTTGGTCCCTGACGTGGATCCGTGCTGTTCCCGTGCG
CCAACCAACAACCCGGCTTCATCTCAGGCCCCATTATCCCGTCTCCAATCGTCTCATCT-CATCACAGGCCCCACCCCAA
CAGTACCACCACCCACAGCTTCACCGCTGCCCATTCTCCACGTCCGTCCGACACTCCCGGCGACCCATATTTATAGCCAC
CCCGGGGTGGAAGGGGTCGGATCAGAGCACCGTTGAGCTAACAGCTGAACAGCACAGAGAAAG---------GATCACAC
GCCCAGCTCGTGGTGATCAAGCTGCCAGCCAAGAGATCGCAAGTCCAAAACACACAGAC----------AATGGTTGTGG
AAGAGGCGATGGATGGCGACATGAGCTTGTCGAACATGGTGCTGAGCTTCCTGGAGGAGGGGGAGACGGAGAGATGGCCG
GAGAACGACGACAACGACGACGAGGAGGAGGAGGGATCCAGCGGCGGCGGTTCCGCCGAGAGCAAGGCCTTCTGGCGCGC
CCAGCACTCCCAGCTTCACGTGAGTTTTCCTCCTCCGTTCGGTAGCCAAATC----------------------------
------GTCTGATCGCACGAGAGTCCTGACGGGAGCGACGCCATGTCTGTTTGCAGGAGGCCTTGGGCAAGACCAGCACG
GCCGAGAGCAGGATCCGGGCGGTGACGGAGAAGGCCGTGGAGAAGATGCGCGCCCCCGCGGG------GGCCGTCTGCTC
CTGCGCGCGGCGCGCGGCCGCCGGCGACTGCCGGAGCTGCATGCTGCGGCACGTGGTGGAGCGGCTCCGCGACGCCGGGT
ACAACGGCGCCGTCTGCAGGTCCAAGTGGGCACGGTCCCTCGATATCCCCTCAGGTAATTGGTTGCTTTCGAGACACAGT
GGTTGGGTTCCTCCTAAGCTAATCTTCAGACGGCGTAATAATAATTAACTTAATGAAAGAGCTGG-----CAGTTCCAGC
AGAAAAGCGCATGCACGGTTGGC------ATG--GACCGTGTGG-----TCTAGGACGTCTGACCCGTCGTGCCGATTCG
AGGGATCTGT-TTTTGATCCTTCTGA-------TGAAGTGTTCTTCGTTTTGTTGTGCTGTTTAGAGTTGATGAGATACC
AGAAGCATATTCGCCTACTAACCAGAG---TAGAACTTCTCATT-----AGAAGTGGGTAAGAAAAACTAGTA---ACAA
CTTGTCATATTCG-CCTACTAACCATAACCATAGTA------GAACTTTAAATTAAAAGTGTGTGGGAAAAGGAAGTAGT
AGCTTGTCAATTCTATAAAGAGGTAATATCACAGGTGGTGCTTAAACTTGCCACCGATGTTCACTTTAGTGCCTGAAGTT
GAAAAATACACCGAACTGGTTTCAAAACTTGGCACGAGCGTGCAAATACGGTGCTAATCTCATTAGTAGACGTTTTTACG
CTGACGTGGCACCGTAGTTCGCTTAGCATGCACAGACAACCTCGCCCTAGCAAACTGGAACTACTGGCCAGTACGCCATA
CGTTTTCTCGTGCATGTTAATGAAAACAGATCTTTTTTTAGAATAATGAAAACATTTCCTATTTTGTTAGATAAAGAAAC
ACGTTCGCGGGTTTTAATGGCCTGCTGCAGTGCAGCCCAGTTTGCGCATGTTAGTTTGATTTAGAAATTTGTAAAAAATA
ATTGTAAATTATAATCACAGTAATAAAAATACATTTCAAATTTTTGTGCTTCAAATTTTTTATAAATACATATAAATTAA
ATAACTAAAATGTTCATGTAATTTAAAAAAATAGTCAGCAATTTACCTGTGATTTATAGTTAAAGCTTTTCGTAAATAAA
TTTTCTAAATTGTTCAGTATATGAAAAAATAATTATAAAAAACTTAATTTTTTGAGTAAATTCCAAAAGATTATGCATGC
TTGGCTTATGCTTAAATGAAAAAAAATGTTATAGGTAGATTTTTTTTATTAATATTCACATGTGTATAAATTTCTTTTTT
TGCGAGAAACATGTGTATAACTTTCATCGTGTCATATATTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTAACTATTAAA
AGGTTTATGTAGTTAAAATAATATTCATGAATTGTAGTATAGAAAATATTTATATAATTCTAAATTGTACAGCCATTTTT
ATAATCAGAAATACCATTTTATTTATATGATACGTTTAAAACAAATATGTGAATATTTTTATTACTGTGATTATAATTTA
GAAACTTTTTTACAAATTTCTAAATGAAACTAAGATGCGCAAACTGGGCTGCACTGCTGAGCCGATTAAAACCCACGTAC
GTGTCTCTTCTTTCTTATCTAAAAAAATAGGAAATGTTTTCATTATTCTAAGAAAAAGGATCTGTTTTCATTAACAGGAA
CGAGAAAATGTATGGCATACTGGTTCTTTCCTAGGGCGAGGTTGTCTGTGCATGCTAATCGAACTACGGTGCTACATCAG
CGTAAAAACACGTCTATTAATAGGATTAGCACTGTATTTGCACGCTCGTGCCAAGTTTTAAAACCAGTTCGGTGTATTTT
TCAACTTCAGGCACTAAAGTGAAAATCGGTGACAAGTTTAAGCACCACCTGTGATATTACCTCTTCTATAAAATGTCACA
TGCATGCCTCACATGGACCTGGTCATCCTACGCCTAAAGAAACGGACGCTTCCAAGTAAATTAATGTCAGGCACCCGTCA
CCGTCTCCATTATTTCCTGACCGCCCGTGACATGAACTTGCATTGCAACTAGCCCGACCAGACCAGTCGACCAGATGTTA
TTACCCCACGTTTAATGGCTGCCTCAAAACACTTCCAAAACCGCACGACAAAATGACACATGCCAAACCGAAAACCGCAC
GTCCTCTGCTAAGCAAAAAGTTTGGTGTCGATCGAAGCTGACGTTTTCCTTCCTGGTCGATCTGTGACGTGCAGGCGAGC
ACAGCTACGTGGACGTGGTGCTGCAGACGCGGAGCGGTAAGGCGGCGCGGGTGGTGGTGGAGCCGAGCTTCCGCGCCGAG
TTCGAGGTGGCGCGCGCCGGCGCCGGCTACCGCGCGCTGGTGGCCGCGCTCCCGGAGGCGTTCGTCGGCCGCGCCGACAG
GCTGCGCGCCGTCGTCAAGGCCATGTGCGCCGCCGCCAAGCAGTGCATGAAGGAGAACAACATGCACCTGGGGCCCTGGA
GGAAGCACAAGTACATGCAGTCCAAGTGGCTCGGCACGTCCGAGCGGGAGGCACCGGCGGCAATCGACACCGTGGCCGCC
GGCTCGC---CGTCGCCGGAGAAGCAGCCCAAGTTCAGGGCGTCCATGCTGAGCTTCGACTTCGGCCGGGCCCCGGTGGT
GGTTGCGTGATGCGTGCATGGCAGACAGACAACAAGAGAAATATGATGCCATGGTGTCACTGTCACGT------------
-------GTATGCCGTATGCCATGCCGGGCGCTCTAGTAGGCTAGT----------------------------------
---------------------------------------------------AGCACTTGTTAGTAGAGTGTGTAACGGGG
ATTGTAGGTTGTGCGTAGTCAGGATCTGTAATTTCTTGAA---TCTGCTCTTGAAGAAGAGAAATCCGTTGATGGGGACA
AGAG---AAAAGT-------------------------------------------------------------------
--------------------------------------TATCCAGTTTTCACAAATCACGGGCTAATTTTCATCCCTTAA
ATTTAGAACCAAACAAACCAGGCAACTAGGGCAGAGCACATCCCCTCAACCTCTACCTTCCGCTCCGGCAGATGGTGACA
GGGAGGCAGCTCCAGCCAGTAGATCGGTTAGGGTTAGGTCTTCGCGGAGGCGGCACTCGGCGGATGACGGAGCATCG-TG
TCGAAATGGTCTTCCTGCCTCCG--ATCCACCTCGAAGTCGTCCATCGGGACAAAGACGACCGAGCTCCGACATAGATCC
ATGTCATTACCTCATGATGGTCGAAGTTAGGGTTACTTGTCGTGTGTCTGCGCGAGTGAGATCTAGTAGTGTTAATTAGG
TACTGCAGATTGATTCAAGGGTTCAAAGGTGGCAACAACGGCTTCGGGGCGCCTGTCTTCAAGGGCACATGCTCGAAGAC
-TTCCAGTTGTCATCAACAAGGTTAAGCCAGCTCCGGTACGGCAACAACGAAAACGACATGTCATTAGCTCATCATAGTG
GTGACGGTAGTGGTC-AGGGAACTCGATGTAATTTTTATTATCTTTGGGGTGTATTCATACTTCTGCTAAACCTTTATAA
AAGATTTGAGTCATTTTCACAAAAAGAACACGTCGTTCATGACAAACTTAACTACAAATAGAAAGATAGAAAGCTATTTT
TAGATAGAAAGA
>chr3B_510
--------------------------------------------------------------------------------
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---------------------------------------AAAATATTTGTCA--AAAAATGATGTATCTAGATGTATTTT
AGTTTTATATACATCCATTTTTATTCATTTCTGCGATAAGTTATTCCGGACAAAGAAGCA-------------TGGCAAG
CGTTATTAACAGAAGATGTCT-----GCGCGCATAGAATCCTGCTTGGTTTCTGACGTGGATCCGTGCTGTTCCCGTGCG
GCAACCAACAACCCGGCTTCATCACAGGCCCCATTATCCCGTCTCCAATCGTCTCATCT-CATCACAGGCCCCACCCCAA
CAGTACCACCACCCACAGCTTCACCGCTGCCCATTCTCCACGTCCGCCCGACACTCCCGGCGACCCATATTTATAGCCAC
CCCGGGGTGGAAGGGGTCGGATCAGAGCACCGTTGAGCTAACAGCTGAGCAGCACAGAGAGAAAGGATCGCTGATCGCAC
CTCCAGCTCGTGCCGATCAAGCA----GCCAAGAGATCAAAAGCCCAAAACACACAGACATACACTCGCAATGGTTGTGG
AAGAGGCGATGGATAGCGACATGAGCTTGTCGAACATGGTGCTGAGCTTCCTGGAGGAGGGAGAGACGGAGAGATGGCCG
GAGAACGACGAGGACGAGGACGAT---GAGGAGGGATCCAGCGCCGGCGGTTCTGCCGAGAGCAAGGCCTTCTGGCGGGC
CCAGCACTCCCAGCTTCATGTAAGTTTTTCTCCTCCGTCCAATTCGTTTGAGCGCGCGAGTGTTCCTGTTTGTCGACCAG
CCAAGAGTTTGATCGCACGCGGGTCCTGATAGGAGAGACGCCACGTTTGCTTGCAGGAGGCCTTGGGCAAGACCAGCACG
GCCGAGAGCAGGATCCGGGCGGTCACGGAGGAGGCCGTGGAGAAGATGCGCGCCCCCGCGGCCGCGGGGGCCGTCTGCTC
CTGCGCGAGACGCGCGGCCGCCGGCGACTGCCGGAGCTGCATGTTGCGGCGCGTCGTGGAGCGGCTCCGCGACGCCGGGT
ACAACGGCGCCATCTGCAAGTCCAAGTGGGCGCGGTCCCTGGATATCCCCTCAGGTAATTGGTTGCTTTCGAGACACAGT
GGTTG-------------CTAATCTTCAGACGACG------TAATTAATTCGGTGAAAGAGCTGG-----CAGTTCCAGC
AGAAAAGTGCATGCACGGTTGGCAATGGCATG--AACCGTGTGGTCTAGTCTAGGACGTCTGACCCGTCGTGCCGATTCG
AGGGATCTGT-TTTTGATCCTTCTGA-------TGAAGTATA-------------TGTTGTTTAGAGTTGATGA-ATGCC
GGAAGCATATTCGCCTACTACTACTAACCATAGTAGAACTTCTCACCAA--AAGTGGGTAAGAAAAAGTAGTA---GCAA
CTTGTCATATTCGCCCTACTAACCATAACCATAGTACTAGTAGAACTTTTAATTAAAAGTGTGTGGGAAAAGGAA-----
AGTAACTTGTCAA-------------------------------------------------------------------
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---------------------------------------------------------------TTCTCT--AATGTCACA
TGCATGCCTCACATGGACCTGGTCATCCTACGCCTAAAGAAACGGACGCTTCCAAGTAAATGTCGAGCAGGCACCGGTCA
CCGTCTCCATTATTTCCTGACCGCCCGTGACATGAACTTGCATTGCAGCTAGCCCGACCAGACCAGTCCACCAGATGTTA
TTGCACCACGTTTAATGGCTGGCTCAAAACACTTCCAAAACCGCACGACAAAATGACACATGCCAAACCGACACGC----
---------------AAAAGTTTGGTGTACATCGAAGCTGACGTTTTCCTTCCTGGTCGATCTGTGACGTGCAGGCGAGC
ACAGCTACGTGGACGTGGTGCTGCAGACGCGGAGCGGCAAGGCGGCGCGGGTGGTGGTGGAGCCGAGCTTCCGGGCCGAG
TTCGAGGTGGCGCGCGCCGGCGCCGGCTACCGCGCGCTGGTGGCCGCGCTCCCGGAGGCGTTCGTCGGCCGCGCCGACAG
GCTGCGCGCCGTCGTCAAGGCCATGTGCGCCGCCGCCAAGCAGTGCATGAAGGAGAACAACATGCACCTGGGCCCCTGGA
GGAAGCACAAGTACATGCAGTCCAAGTGGCTCGGCACCTCCGAGCGGGAGGCGCCGCCGGCGCTCGACGCGGTGGCCGCC
GGCTCGCTGTCGTCGCCGGAGAAGCAGCCCAAGTATAGGGCGTCCATGCTGAGCTTCGACTTCGGCCGGGCCCCGGTGGT
GGTTGCGTGATGCGTGCATGGCG----GACAACAGGAGGAGTATGATGCCATGGTGTCACGTGTATGTACCCATGTTATA
GA----------CCGTATGCCATGCCGGGCACTGTAGTAGGCTAGAG---------------------------------
------------------------------------------------------------TAGTAGAGTGTGTAACGGGG
ATTGTAGGTTGTACGTAGTCAGGATTTGCAATTTCATGAA---TCTGCTCTTGAAGAAGAGAAATCCGTTGATGGAGATA
AAAGTAAAAAGTTACTCCCTCCGTTCACTTTTATAAGGCCTTAAAGACATTTCAGACAATGTGCAAAATAGCCTATTTTC
AGTTGTCTGAAATGACTTATAAAAGTGAACGGAGGGAGTATTCAGTTTTTACAAATCACAGGCTAATTTTCATCCCTTAA
CTTTAGAACCAAACAAACCAGGCAACTAGGGAGGAGCGCATCCCCTCAACCTCTGCCTACCACTCCGGCAGGCTAGGAGG
CAGC-------CTAGCTAGGAGATAGGTTAGGGTTAGGTCTTCGCAGAGGCGGCACTCGGCGGATGACGGAGCATCACTG
TCAAAATGGTCTTCCCGCCTCCAAAATCCACCTCGAATTCGTCCATCGGGACGAAGATGACCGAGCTCCTTTATAGATCC
ATGTCATTACCTCAGGGTGGTCGAGGTTAGGGTTACTTGTCATGTGTATGCGCAAGCGAGACCTGGTG-------TTAGG
TACTGCAGATTGATTCAAGGGTTCAACGGTGGCAACAACGGCTTCTGGGTGCCTATTCTCAAGGGCACGTGCTCGAGGAC
TTTTCAGTTGTCATCAACAAGATTAGACCTGCTCCGGTATGGCAACAACGAAAACGACGTGTCATTAGCTCATCCTGGTG
GTGACGGTAGTGGTCCAGGGACGTCAGTGTGATTTTTATTATGTTGAGGGTGTATTTGTACTTCTGATGAATCTTTATAA
AAGATTCAAGTCCTTTTCACAAAAGGAGCACGTCGTTCATCACAAACTTAACTACAAATAGAAAGATAGAAAGCTATTTT
TAGATAGAAAGA
>SNPs
SS------------------------------------------------------S----------------S------
-------------S------------------------------------------------------------------
----------------------S-------------------S-----------------------S------S--S---
--------S-S----------------------------S------S-S--------S----S------------S----
----S---S-S--------------------S--S------------------S---------S---S-------S----
S----S----------------------------------S-----------------S---------SS---------S
S------------S----------S--S-S--SS---S-------S--S-S-SSS----S--------------------
-S-----S------S-----------------------------S----------------------S-SS---------
--------------------------------------------------------------------------------
-----------------SS--SS-----------------------S------------S--------------------
--------------------------------------------------------------S---S-------------
-------------------------------------------S------------------------------------
S-------S----------------------------------------S-----------------SS-----------
-------------------------------------------------------------------------S------
--------------S-----------------------------------------------------------------
---------S------------------------------S--------S------------------------------
--------S----------------------------------------------------S------------------
-------------------------------------------S------------------S--S--------------
------------S-----S-----S-------------------------------------------------------
----------------------------------------------------------S---------------------
------------------S----------------------------------------------SSSSS----------
--------------S--------------S--SS----------------------------------------------
-------S--S---------------SSSSSSS----------------------S--------------------S---
--------------------------------------------SSS--------------------------SSS----
--------------------------------------------------------------------------S-----
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--------------------------------------------------------------------S-----------
----------------------------------S----------------------------S---------------S
-------------------S---------------------------S---S----------------------------
---------------S-------------------------------------S------------S-------------
---S----------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
----------------------S-------S-----------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S--S-------------------------------------------------------------------
---S------S------------S---------------S----------------------------S----------S
SSSSSSS------------------------------S----S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--------------------S-----
----------------------------------------SSS------------------------------------S
--------------------------------------------------------------------------------
------------------------------------------S------------S------------------------
-----S-----------------------------------------------------------------S-----S--
------------------------------------------S-------------------------S--S-----S--
---------------------------S-----S----------------------------------------------
----------------------S-----------------S------S---SS------------S--------------
--------------------------------------------S-----------------------------------
--S------------S--------------------S------------------S------------------------
---------------S-----S--------------------S-----------------S---S---------------
-------------------S------------------------------------------------------------
------------
>forward_969
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---------------------------------------------------------------------AAGGATCACAC
ACCCAGCTG-----------------------------------------------------------------------
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>reverse_3808
--------------------------------------------------------------------------------
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-----------------------------------------------CCTATCCCGACCAGACCAGT-------------
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------------
>forward_1289
--------------------------------------------------------------------------------
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---------------------------------------------------------------------CGTTCCGTAGC
CAATTCGTG-----------------------------------------------------------------------
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------------
>reverse_4635
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--------------------------------------------------------------------------CCGGGG
ATTGTAGGTTGTGC------------------------------------------------------------------
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------------
