>input_sequence_45941
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------------------TCGACGACGTGTCGTGGATCTAGGTGCACAAG---GAGGACTGATTTTTT--------GTTT
TTATTTGGTGGTGTGGAATTCTTGGCCTCTCC-CCTCAGGGCAGCGTGGGCGCGTGTGTTGCGAGCCATGGCCGGCGAGA
AGAAGATGTTCGGCTTCGAGGAGGTCGCCAAGCACAACGTCACCAAGGACTGCTGGCTCGTCATCGCCGGCAAGGTATGC
TTCCCTGCTCGCTACCACTCCTTCGTTTTCCTACCCTGGCATCTACTTCTCCTGCGCGTTCTGTGGCTAGTCTTCTTGTT
CCGGCACAGGCTTCGCCTGCAAAGCCTGATGAGCTAGATAATACTTCTAGATGCTAGGCCTCTTCACGAGGAAGAATTGA
GTCT--------GCTGGGCTCGTGGAATT-GAGTATTCTTGTTGAGCTTGCTCAAGTCAATTCCGCCCAATCAGATCTGT
TCAGCTGCTCATACTTCGTCAACAGAGATGTTCTCTGACCAAACACATAGTCCTATGAGGACAAATAGCAAGTGATTTGT
TTTAAGCTTGTGTTCCAATTCCACACCAGTTACAGCCTTGTAGCCTTTGGTGCACTCCATGCTGTTACATGCACCTTCTG
TAATATTGTAGTACATAGATTGGTCGACTCGTACAAGATCTGTCTTGCGTGTCGCGTATCAGGATTTCATTCTTGACGAG
GTGCTGAGGGAAAGGTATTCCAGCAAAATCTTATCAACTGGACAGCTCTTTCATAGGATCAAGTACAAGTATGGGGAGAC
AGTGAAGAAAAGCTGCTTCCTCTTCTGC-AATGTGCATATTAACTAGTCATGGTGGAAGGAAATGGGTCAATTAAGATGT
ATCAGGGCTGTTAATTCACATGGGCGTGGTTGATGTTGGGTAGCCCCACCAAAATGGTGTCTCTGCACTGCAGTATGTGT
GGCCGATATGTTTGTTGGTACCCATTTCAATTGTGTGGCCTTGAATGTTCCAGTGTGGCATGTG------TGGCCATACG
GTCTAGAGTTTTCTCTGCACCCAGTGGATTAGATTCCGTTGGAGTAAAAGAAAATACCCAGCAGGAATTGAGAAATTTAC
CTGACGAAATTCCTGTTATGTGTGCTGCAAAATATGCGTGACTATATCAGCTCATGTTGTGTAACATCTCAGGTGTATGA
TGTCACCCCGTTCATGGATGAGCATCCTGGTGGAGATGAGGTACTGCTGGCAGTAACAGGTGAGTCATTTTCTTTGTCTT
TCATAATTGTTGATGAGACTAAGTTCAAAAGTCTTGCGCAACTTCGATCTTAATATTCAAACCTGATCACTACTCTCCAA
TATAACCAGGGAAAGATGCAACCAGCGATTTCGAAGATATCGGACACAGTGATTCCGCAAGGGAGATGATGGAGAAGTAC
CACATCGGGGAGATTGATGCTTCAACCATCCCAGCAAAGCGTACATTTGTACCTCCTCAGCAAGGGTCCCATGTCCAGGC
CAAGGATAGCGACCTCCTCATCAAGATCCTGCAGTTTCTTGTTCCCATTTTAATCTTGGGGCTTGCATTTGGTATCCGGC
ACTACAGCAAATCTGAGTAGGCTGTTGTTGGCGAGTTGCTTCAGAGAAATAGCTTTCAAGTAATATGGTTTGAGTTAGAA
CTACATAATAATGG-----------TGGTTTGAGTTA-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>chr1D_1_TraesCS1D01G184800
TGAAGTGATGAACCAATACATTATTACGATTTCAATTATCCAAATGGCTTGGTACTAG---GACCCAAGGCAAACAGCCT
AACCAAGTCACGGCGATATGCAGTACTGAATGGAGTGCCGATCATGCACAAG-----GACGCGCGTCTGCACGAACCTGG
ACGAAGAACCCTCAGCATCGGCGGATCCGACCCCGCCCCCCTCCCCAACGCCTCCGCCCCCGTCCGCCTCGCCGTCCTCC
TTGATCTCACCGACGAGCTCCCGCGTGGTGAACGGCTGGGACCCCTCGGCGCCCAGCGCTGCCTTGGCCTCCTCCTCCTT
GGCCGTCGCCGATCGCGGCGGCTCCTCCTCTTCCTCCCCCGCCTCGTCCTCCACC------------TCCACCGCCGCCC
TGTCGTCCGCGCCGTCGGGGAATTCCCCGCCGTCCGCGGGTACGGGCCGCGTGGGCTTCTCCATGGCACGAGCCGATCGG
CGTCGGGTACACGATCTGGGGGCGGAGGGCGCGGCGCGAGCGTCTCACCGGGGCA--------CTCCTCTCGTGTCTCCT
CTCGCGCCACTCGGTCGCGTACGACTGGGCAAACGGAAA-GGGTAGCGATCGCCGAGGCCGAGGC------GGGCGGGCG
CGACTCCGCAAGCTGACGTGCCAACGGACCGAGG----------GGCCGAGGGTTGAAGT--CCCCCAAGGGAGGAAACG
GCCCGGCAGGGTCCGGCCCACGACCGCCGCGCGAGGGGCAATTTGGGAAACACGGCCGCGAAGGGATGCGGGAGGGGCCG
GACGCGCCGGGCTCAAATACAGCAGACTCCGGCGCCACCGCGCACGCACGCACGCACGCGGAGCGGGGGGCCTGTCCAAA
GCGCGTGATCCATTTCCGCCTCCTCG-CTTCCTTCTCGGTCTCGGTGCGTGCGCCACTCCGTCGGCCCG----TCCCCCT
CACCGGCGACTTCTCGCCTCGCGGCCGCTCC------CAGCCCCAGGTGAGTGAGAGCGACCCGACGGCCTACCAACAGC
GCCCCAACCGCTTTTCTCTCGACGACGTGTCGTGGATCTAGGTGCACAAG---GAGGACTGATTTTTT--------GTTT
TTATTTGGTGGTGTGGAATTCTTGGCCTCTCC-CCTCAGGGCAGCGTGGGCGCGTGTGTTGCGAGCCATGGCCGGCGAGA
AGAAGATGTTCGGCTTCGAGGAGGTCGCCAAGCACAACGTCACCAAGGACTGCTGGCTCGTCATCGCCGGCAAGGTATGC
TTCCCTGCTCGCTACCACTCCTTCGTTTTCCTACCCTGGCATCTACTTCTCCTGCGCGTTCTGTGGCTAGTCTTCTTGTT
CCGGCACAGGCTTCGCCTGCAAAGCCTGATGAGCTAGATAATACTTCTAGATGCTAGGCCTCTTCACGAGGAAGAATTGA
GTCT--------GCTGGGCTCGTGGAATT-GAGTATTCTTGTTGAGCTTGCTCAAGTCAATTCCGCCCAATCAGATCTGT
TCAGCTGCTCATACTTCGTCAACAGAGATGTTCTCTGACCAAACACATAGTCCTATGAGGACAAATAGCAAGTGATTTGT
TTTAAGCTTGTGTTCCAATTCCACACCAGTTACAGCCTTGTAGCCTTTGGTGCACTCCATGCTGTTACATGCACCTTCTG
TAATATTGTAGTACATAGATTGGTCGACTCGTACAAGATCTGTCTTGCGTGTCGCGTATCAGGATTTCATTCTTGACGAG
GTGCTGAGGGAAAGGTATTCCAGCAAAATCTTATCAACTGGACAGCTCTTTCATAGGATCAAGTACAAGTATGGGGAGAC
AGTGAAGAAAAGCTGCTTCCTCTTCTGC-AATGTGCATATTAACTAGTCATGGTGGAAGGAAATGGGTCAATTAAGATGT
ATCAGGGCTGTTAATTCACATGGGCGTGGTTGATGTTGGGTAGCCCCACCAAAATGGTGTCTCTGCACTGCAGTATGTGT
GGCCGATATGTTTGTTGGTACCCATTTCAATTGTGTGGCCTTGAATGTTCCAGTGTGGCATGTG------TGGCCATACG
GTCTAGAGTTTTCTCTGCACCCAGTGGATTAGATTCCGTTGGAGTAAAAGAAAATACCCAGCAGGAATTGAGAAATTTAC
CTGACGAAATTCCTGTTATGTGTGCTGCAAAATATGCGTGACTATATCAGCTCATGTTGTGTAACATCTCAGGTGTATGA
TGTCACCCCGTTCATGGATGAGCATCCTGGTGGAGATGAGGTACTGCTGGCAGTAACAGGTGAGTCATTTTCTTTGTCTT
TCATAATTGTTGATGAGACTAAGTTCAAAAGTCTTGCGCAACTTCGATCTTAATATTCAAACCTGATCACTACTCTCCAA
TATAACCAGGGAAAGATGCAACCAGCGATTTCGAAGATATCGGACACAGTGATTCCGCAAGGGAGATGATGGAGAAGTAC
CACATCGGGGAGATTGATGCTTCAACCATCCCAGCAAAGCGTACATTTGTACCTCCTCAGCAAGGGTCCCATGTCCAGGC
CAAGGATAGCGACCTCCTCATCAAGATCCTGCAGTTTCTTGTTCCCATTTTAATCTTGGGGCTTGCATTTGGTATCCGGC
ACTACAGCAAATCTGAGTAGGCTGTTGTTGGCGAGTTGCTTCAGAGAAATAGCTTTCAAGTAATATGGTTTGAGTTAGAA
CTACATAATAATGG-----------TGGTTTGAGTTAGAACAACATAATGATGGTATTCGTTGGGTGGCAGTGTGTTGTC
TCATTGATCATACAAGGCACTCTCAGTTCCAAACATCCATATATATGCCCAGATTACTTGAATTATGTTTACATTCTCAA
CATATGG---AGTCTCTATGTATTTTTGTA-CTGATGGAGTGTCTACAATTGAGGATGATGGGAATATTGCTATGCTATT
AAACAATCTCAATTTCAGAATAAATATGGGCATCATACGTTGCAGTGATGTTCCCACA---TAATTTGTCTGTCGGTTTC
ACTATATATTGAGCATATTCTTGCAGTTATACACGCCTAAAAGAGTTGTGCAGCACTTATAGAGCATGCAGGTGACAGCG
TGGGCCAGTTGATCAATTCGATTATCGGAAATTCCAAGTTTATTTTATGAAGGCAGAATCCCTTCCTGAATACACCCTCT
GCAGTAATAGCTGAACTAAATGTCTTTCAGGACATTGAGATATATTTCCCTCCACACCACCCTTCAGGCACAAGGCTTTT
TCCTAGTTAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------AAATACACTGCAAGACCAAATTGTATCCAGCATCCACAGT
CCAAGAAGTAGCAACTGATGACAAGATCCACAAATCTGCTCTGTGC----AACAGTCACATGCAGAGAGAGGGCACACCA
GAAAACAAGACCAGAAATGTTTCTGTCCATAACCTCATACAAGATATTGTATATAACAGACATATGATAACGTGATAACT
GCCAGGACCAATCATACAAATATAAGCATGGGCAGATCCCGGCTACTCGATCCTGTCTTGTACGGTCACCACTAAATCAT
GGGCGTCGTCCAGGAGCTTCCAAATGTCCAGCTGCCCGGCCATGCTGTTACAGTCCCTAATGATCTCATCCATGCTGCTA
TAGCTCTCTATTATCAATTTCCTCTTCTCCAGTACACTGGCTGCAATTGCATACAGCAGCAGGTCATCAGTTGGAGGGGC
TCCAAGCTGAAGTTTTCTCCAGGATGATGTTGTGATCC
>chr1A_1
TGAAGCGATCAAACAACATATTTGGA----TTCCATTATCCAAATGGCTCGGTACTAGGACGACCCAAGGCAAACAGCCT
AACCAAGTCCCGGCGATATGCAGTACTGAATGGAGTGACATCATGGCACAAG-----GACGCGCGTCTGCACGAACCTGG
ACGAAGAACCCTCAGCATCGGCGGATCCGACCCCGTCCCCCTCCCCAACGCCTCCGCCCCCGTCCGCCTCGCCGTCCTCC
TTGATCTCACCGACGAGCTGCCGCGTGGTGAACGGCTGGGACCCCTCGGCGCCCAGCGCCGCCTTGGCCTCCTCCTGCTT
GGCCGTGGCCGATCGTGGCGGCTCCTCCTCTTCCTCCCCCACCTCGTCCTCCACC------------TCCACCGCCGCCC
TGTCGTCCGCG---------------------------GGTACGGGCCGCGTGGGCTCCTCCATGGCACGAGCCGATCGG
CGTCGGGTCCACGATCT-GGGGCGGAGG-CGCGGCGCGAGCGTTGGCGGTCTCACTGCGCACTCTCCTCTCGTGTCTCGC
CTCGCGCCACACGGTCGCGTACGACCGGGCAAACGGAAA-GGGTAGCGATCGCCGAGGCCGAGGCCGAGGCGGGCGGGCG
CGACTCAGCAAGCTGACGTGCCGAAATGCTGCTGACGGGCCGACGGCCGAGGGTTGAGG-----CCCAAGGGAGGAAACG
GCCCAG---------------GGCCGCCGCGCGAGGGGCATTTTGGGAAAGAAGGCCGCGACGGGGTGCGGGAGGGGCCG
GACGCGCCGGGCTCAAATACAGCAGACTCCGGCGCCACCGCGCACGCACGCACGCACGCGGAGCGG-GGGGCTGTCCAAA
GCGCGTGATCCATTTCCTCCTCCTC--------------TCTCGGTGCGTGCGCCACTCCGTCGGCCCGCCCGTCCCCCT
CACCGGCGACTTCTCGCCTCGCGGCCGCTCC------CA------GGTGAGTGAGAGCGACCCGACGGCCAACCAACAGC
GCCTCAACCGCTTTTCTCCCGACGACGTGTCGTGGATCTAGGCGTACACCGAAGAGGACTGATTTTTTTTGGGATTGTTT
TTATTTGGTGGCGTGGAATTCGTGGCCTCTCCTCCTCAGGGCAGCGTGGGCGCGTGTGTTGCGAGCCATGGCCGGCGAGA
AGAAGATGTTCGGCTTCGAGGAGGTCGCCAAGCACAACGTCGCCAAGGACTGCTGGCTCGTCATCGCCGGCAAGGTATGC
TTCCCTGCTCGCTACCACTCCTTCGTTTTCCTACCCTAGCATCTACTAATCCTGCGAGTTCTGTGGCTAGTCCTCTTGTT
CCGGCGCAGGCTTCGCCTGCAAAGCCTGTTGCGCTAGATAACACTTCTAGATGCTAGGCTTCTTCTCGAGGAAAAACTGA
GTCTGCTGGGGCGCTGGGCTCGTGGAATTTGAGTATTCTTGTTGAGCTTGCTCAAGTCAATTCCGCCCAATCAGATCTG-
--------------TTCGTCAACAGAGATGTTCTCTGACCAAACACATAGTCCTATGAGGACAAATAGCAAGTGATTTGT
TTTAAGCCTGCGTTCCAATTCCAGACCAGTTACAGCCTTCTAGCCTTTGGTGCACTCCATGCTGTTACATGCACCTTCTG
CAATATTGTAC---ATAGATCGGTCGACTCGTACAAGATCCGCCTTGCGTGTCGCATATCAGGATTTCATTCTTGACGAG
GTGCTGAGGGAAAGGTATTCCAGCAAAATCTTATCAACTGGACAGCTCTTTCATAGGATCAAGTACAAGTATGGGGAGAC
AGTGAAGAAAAGCTGCTTCCTCTTCTGC-AATGTGCATATTAACTAGTCATGGTGGAAGGAAATGGGTCAATTAAGATGT
ATCAGGGCGATTGATTCACATGCACGTGGTTGATGCTGGGTAGCCCCACCAAAATGGTGTCTCT-----GCAGTATGTGT
GGCCGATATGTTTGTTGGTACCCATTTCAATTGTGTGACCTTGAATGTTCCAGTGTGGCATGT------ATGGCCATACG
GTCTAGAGTTTTCTCTGCACCCAGTGGGTTATATTTCGTTGGAGTAAAAG-AAATACCCAGCAGGAATTGAGAAATTTAC
CTGACGAAATTCCTGTTATGTGTGATGCAAAATATGCCTGACTATATCAGCTCATGTTGTGTAACATTTCAGGTGTATGA
TGTTACCCCTTTCATGGATGAGCATCCTGGTGGAGATGAGGTACTGCTGGCAGTAACCGGTGAGTCATTTTCGTTGTATT
T-ATAATTGTGGATGAGACTAAGTTCAAAAGTCTTGCGCAGTTTCGATTTTAATATTCAAACCTGATCACTA--CTCCAA
TATAACCAGGGAAAGATGCAACCAGCGATTTCGAAGATATCGGACACAGTGATTCCGCAAGGGAGATGATGGAGAAGTAC
CACATCGGGGAAATTGATGCTTCAACCATCCCAGCAAAGCGTACATTTGTACCTCCTCAGCAAGGGTCCCATGTCCAGGC
CAAGGATAGCGACCTCCTCATCAAGATCCTGCAGTTTCTTGTTCCCATTTTAATCTTGGGGCTTGCATTTGGTATCCGGC
ACTACAGCAAATCTGAGTAGGCTGTTGTTGGCGAGTTGCTTCGGAGAAATAGCTTTCAAGTAATATGGTTTGAGTTAGAA
CAACATAATAATGGTATTGGTTGGCTGGTTTGAGTTAGAACAACATAATGATGGTACTCGTTGGGTGGCAGTGTGTTGTC
TCATTGATCATACAAGGCACTCTCAATTTGAAACATCCATATGTATGCCCAGATTACTCGAATTATGTTTACATTCTCAA
CATATGGTGGAGTCTCTACATATTTTTTTAGCTGATGGAGTGTCTACAATTGAGGATGGTGGGAATATTGCTATGCTATT
AAACAATGTCAATTTCAGAATAAATATGGACATCATACATTGCAGTGATGTTCCCACA---TAATTTGTCTGTCCGTTTC
ACTATATATTGAGCATATTCTTGCAGTTATACACGCCTAAAAGAGTTGAGCAGCACTTATAAAGCATGCAAGTGACAGCC
TGGGCCAGTTGATCAATTCGATTATCGGAAATTCCATGTTTATTTTATGAAGGCAGAATCCCTTCCTGAATACACCCTCT
GCAGTAA---CTGAACTAAACGTCTTTCAGGACATTGAGATATATTTCCCTCCACACCACCCTTGAGGCACAAGGCTTTT
TTCTAGTTAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------AAATACACTGCAAGACCAAATTGTATCCAGCATCCACAGT
CCAAGAAGTAGCAACAGATGACAAGATCCACAAATCTGCTCTGTGCAAAGAACAGTCACATGCAGAGAGAGGGCACACCA
AAAAACAAGACCAAAAATGTTTCTATCCATAACCTCATACAAGATATTGTATATAACAGACATATGATAACGTGATAACT
GCCAGGACCAATCATACAAATATAAGCATGGGCAGATCCCAGCTACTCGATCCTGTCTTGTACGGTCACCACTAAATCAT
GGGCGTCGTCCAGGAGCTTCCAAATGTCCAGCTGCCCCGCCATGCTGTTACAGTCCCTAATGATCTCATCCATGCTGCTA
TAGCTCTCTATTATCAATTTCCTCTTCTCCAGTACACTGGCTGCAATCGCATACAGCAGCAGGTCATCAGTTGGAGGGGC
TCCAAGCCGAAGTTTTCCCCAGGACGATCGTGCGATCC
>chr1B_1
TGAAGCGATCAAACAACATATTTGGA----TTCCATTATCCAAATGGCTTGGTACTAGGACGACCCAAGGCAAACAGCCT
AACCAAGTCCCGGCGATATGCAGTACTGAATGGAGTGACGATCATGGCACAAGGACCGACGCGCGTCTGCACGAACCTGG
ACGAAGAACCCTCAGCATCGGCGGATCCGACCCCGTCCCCATCCCCAACGCCTCCGCCCCCGTCCGCCTCGCCGTCCTCC
TTGATCTCACCGACGAGCTCCCGCGTGGTGAACGGCTGGGACCCCTCGGCGCCCAGCGCCGCCTTTGCCTCCTCCTGCTT
CGCCGTCGCCGATCGCGGCGGCTCCTCCTCTTCCTCCCCCGCCTCGTCCTCCACCGCCACCTCCACCTCCACCGGCGCCC
TGTCGCCCGCGCCGTCGGGGAATTCCCCGCCGTCCGCGGGTACGGGCCGCGTGGGCTGCTCCATGGCAGGAACCGATCGG
CGTCGGGTCCACGATCTGGGGGCGGAGG-CGCGGCGCGAGCGTCTCACCGGGGCA--------CTCCTCTCGTGTCTCCT
CTCGCGCCACTCGGTCGCGTACGACTGGGCAAACGGAAAGGGGTAGCGATCGCCGAGGCCGAGGC------GGGCGGGCG
CGACTCCGCAAGCTGACGTGCCAACGGGCCGAGG----------GGCCGAGGGTTGAAGTCCCCCCCAAGGGAGGAAACG
GCCCGGCAGGGTCCGGCCCACGGCCGCCTCGCGAGGGGCAATTTGGGAAACACGGCCGCGAAGGGATGCGGGAAGGGCCG
GACGCGCCGGGCTCAAATACAGCAGACTCCGGCGCCACCGCGCACGCACGCACGCACGCGGAGCGGGGGCCCTGTCCAAA
GCGCGTGATCCATTTCCTCCTCGCTTCCTTCTCTCTCGGTCTCGGTGCGTGCGTCACTCCGTCGGCCCG----TCCCCCT
CACCGGCGACTTGTCGCCTCGCGGCCACTCCCAGCCCCA------GGTGAGTGAGAGCGACCCGACGGCCAACCAACAGC
GCCCCAACCGCTTTTCTCCCGACGACGTGTCGTGGATCTAGGTGCACAAG---GAGGACTGATTTTTT--------GTTT
TTATTTGGTGGTGTGGAATTCTTGGCCTCTCC-CCTCGGAGCAGCGTGGGCGCGTGTGTTGCGAGCCATGGCCGGCGAGA
AGAGGATGTTCGGCTTCGAGGAGGTCGCCAAGCACAACGTCGCCAAGGACTGCTGGCTCGTCATCGCCGGCAAGGTGCGC
TTCC----------CCACTCCTTCGTTTTCCTACCCTAGCATCTACTTCTCCTGCGAGTTCTGTGGCTAGTTTTCTTGTT
CCGGCACAGCCTGTTGAGCTAGTC-------AGCTAGATAGTACTTCTAGATGCTAGGCTTCTTCACGAGGAAGAATTGA
GTCT--------GCTGGGCTCGTGGAATTCGAGTATTCTTGTTGAGCTTGCTCAAGTCAATTCCTCCCAATCAGATCTGT
TCAGCTGCTGATACTTCGTCAACAGAGATGTTCTCTGACCAAACACATACTCCTATGAGGACAAATAGCAAGTGATTTGT
TTTAAGCTTGTGTTCCAATTCCAGACCAGTTACAGCCTTCTAGCCTTTGGTGCACTCCATGCTGTTACATGCACCTTCTG
CAATATTGTACTACATAGATTGGTCGACTCGTACAAGATCCGCTTTGTGTATCGCGTATCAGGATTCCATTCTTGACGAG
GTGCTGAGGGAAAGGTATTCCAGCAAAATCTTATCAACTAGACAGCTCTTTCATAGGATCAAGTACAAGCGTCGGGAGAC
GGTGTACCAAAGCTGCTTCCTCTTCTGCAAATGTGCATATTAACTAGTCATGGTGGAAGGAAATGAGTCAATTAAGATGT
ATCAGGGCGATTGATTCACATGGACGTGGTTGATGCTGGGTAGCCCCACCAAAATGGTGTCCCT-----GCAGTATGTGT
GGCCGATATGTTTGTTGGTACC-ATTTAAATTGTGTGGCCTTGAATGTTCCAGTGTGGCATGTATGGCCATGGCCATACG
GTCTAGAGTTTTCTCTGCACCCAGTGGATTAGATTCCGTTGGAGTAAAAGAAAATACCCAGCAGGAATTGAGAAATTTAC
CTAACGAAATTCCTGTTACATGTGCTGCAAAATATGCCTGACTATATCAGCTCATGTTGTGTAACATTTCAGGTGTATGA
TGTCACCCCTTTCATGGATGAGCATCCTGGTGGAGATGAGGTACTGCTGGCAGTAACCGGTGAGTCAT----------TT
T-ATAATTGTGGATGAGGCTAAGTTCAAAAGTCTTGCGCAATTTTGATTTTAATATTCAAACCTGATCACTACTCTCCAA
TATAACCAGGGAAAGATGCAACCAGCGATTTCGAAGATATCGGACACAGTGATTCCGCAAGGGAGATGATGGAGAAGTAC
CACATCGGGGAGATTGATGCTTCAACCATCCCAGCAAAGCGTACATTTGTACCTCCTCAGCAAGGGTCCCATGTCCAGGC
CAAGGATAGCGACCTCCTCATCAAGATCCTGCAGTTTCTTGTTCCCATTTTAATCTTGGGGCTTGCATTTGGTGTCCGGC
ACTACAGCAAATCTGAGTAGGCTGTTGTTGGCGAGTTGCTTCGGAGAAATAGCTTTCAAGTAATATGGTTTGAGGTAGAA
CAACATAATAATGGTATTGGTTGGCTGGTTTGAGTTAGAACAACATAATGATGGTATTCGTTGGGTGGCAGTGTGTTGTC
TCATTGATCATACAAGGCACTCTCAGTTCCAAACATCTATATGTATGCTCAGATTACTCGAATTATGTTTACATTCTCAA
CATATGG---AGTCTCTACATATTTTTTTAGCCGATGGAGTGTCTACAATTGAGGATGATGGGAACATTGCTATGCTATT
AA-CAATCTCAATTTCAGAATAAATATGGACATCATACATTGCAGTGATGTTCCCACATAGTAATTTGTCTGTCGGTTTC
ACTGTAT-TTGACCATATTCTTGCAGTTATACACGCCTAAAAGAGTTAAGCAGCACTTATTAAGCATGCAAGTGACGGCG
TGGGCCAGTTGATCAATTCGATTATCGGAAATTCCAAGTTTATTTTATTAAGGCAGAATCCCTTCCTGAATACACCGGCT
GCAATAA---CTGAACTAAACGTCTTTCAGGGCATTGAGATATTTTTTTTTTGAAACGAAGGCAAAAGATTTGTCTCATC
AATTAATTAAAAAGAAGAGAGTTGTCCAGTTAATTAACGGAAAATCGGGCGAAAACCGAAGACAAGGCGGCCGGAAAAAA
GCGGGTGGATTTTCAGTCACACCGCTCATCGTGCCTAAAGGCACTCTTCATAGTCTGACCAAGCTTGAACGGGCTTTTCT
CTGGTCAGGTGCTGACAAGACTACGGGAGCCAAGTGCAAAGTGAAATGGGACACAGTTTGTAGGCCCAAGGAGTATGGTG
GCTTGGGGGTGCTTAACTCTGAAAAATTTACGCGTGCCCTTCGCCTTAGGTGGCCTTGGTTCGAATGGAAGGAGCCCCAC
AGACTGTGGGTTGGTTATGGCAACCCCTGTTCGGAGGATGATCTCAGCTTCTTTTATGCCTCCACCACCATTACTCTGGG
AAATGGAGCCAAAACGCCTTTCTGGAATTCTCCTTGGCTCCTTGGCCGTATGCCCAAAGAGATCGCCCCACACATCTATG
AGGCCTCCAGGAGAAAGAACTGGAAGGTTAGGGAGGCTATTAGAGGGAACGCTTGGATCTTCAAAATCATCTACAACACC
GTCATCACCGGAGATCACATTCGTGAGTTTTTCACTCTTTCGATGCTTCTGGATGACGTCCATCTTGATGAGCATCGGGA
GGACGACATCACCTGGAAGCATTCCAATGATGGGGTGTACTCGACAGCCAGTGCTTATAAAGCTCAATTTCTTGGGTTAA
CCTTGTCACCAATGGATCGCATGGTCTGGAAAGTTTGGGCTCCTCCGAAGATCAAATTCTTTGCCTGGTTGGCTATCCAA
GATAGGATCTGGACTGCGGACCGCCTGGAGAGGCGCGGGTGGGCCAACTGCGGTCTGTGCCCTCTTTGTTCTAGGGAGCA
GGAAACAGGTGCTCATCTTCTCTTCAAGTGCCGCTTCACTATTCGGCTTTGGAGGTCTCTCGCGGCCAAGCTCGGTCTTC
ATCACATTGAGACCTCCAGGTGGCATCTTCATGGCTCCGTCCTAGATTGGTGGGAGGATGGTACTGGGAGCCACGTCCCC
AACAGGAGTGCCCTGGCCTCCCTAACCCTCCTTGTCTCCTGGACCATCTGGAATGAACATAATGCTAGGGTGTTCCGACA
CAAAAGTGCTCCGCCGCCTATTCTTCTTAACACAATCCTGGAGGAGGCCAAGCTTTGGGTTACAGCTGGAGCAAAGAAAC
TAGGGCGTATTGTATATCGAGAGTAGTCCGCATGCCGTGCTTAAGGTGGTTGTTGTAACACTCTTATCTACTCTCTCTTA
TTTAATCGATGAGGCAAATCTTTTGCCTCCGTTTCGGAAAAAAAACACTGCAAGACCAAATTGTATCCAGCATCCACAGT
CCAAGAAGTAGCAACAGATGACAAGATCCACAAATCTGCTCTGTGCAAAGAACAGTCACATGCAGAGAGAGGGCACACCA
GAAAACAAGACCAAAAATGTTTCTATCCATAACCTCATACAAGATATTGTATATAACAGACATATGATAACGTGATAACT
GCCAGGACCAATCATACAGATATAAGCATGGGCAGATCCCAGCTACTCGATCCTGTCTTGTACGGTCACCACTAAATCAT
GGGCGTCGTCCAGGAGCTTCCAAATGTCCAGCTGCCCGGCCATGCTGTTACAGTCCCTAATGATCTCATCCATGCTGCTA
TAGCTCTCTATTATCAATTTCCTCTTCTCCAGTACACTGGCTGCAATTGCATACAGCAGCAGGTCATCAGTTGGAGGGGC
TCCAAGCTGAAGTTTTCTCCAGGATGATCTTGTGATCC
>SNPs
-----S---S--S---S-S---SSS-SSSS---S----------------------------------------------
---------S---------------------------S------------------------------------------
-----------------------------------S--------------------------------------------
-----------------------------------------------------------S----------------S---
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------S-------------------S---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------S-----SS-----------------------------------------------
---------------------------------------SSSSSS-------------------------S---------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-------------------------------------S------------------S-----------------------
----------------------------S------------------------------S--------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-----------------------S---------------S----------------------------------------
S---------S-----------------------------S-S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------SS--S----------S-----------S----------------------------SSSSS-----------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-------------------------------------S-----------------------------S------------
---------S-----------------------------------------------S--------------S----S--
-S--------S------------------------------S------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
-S------------------------------------------------------------------------------
------------------------------------------S---------------S---------------------
------------------SS-------S----------------------------------------------------
-----------------------------S--------S-----------------------------------------
------------------------------------------------S------------S--------S---------
--------------------------------------------------------------------------------
-------SSS----------S-------------------------------------------S---------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------S----------------------------------------------------------------
-------------S----------S-------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------
>forward_906
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GATCCATTTCCGCCTCCTCG------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1988
--------------------------------------------------------------------------------
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-------------------------------------------------------------------CTGCAGTATGTGT
GGCCGAT-------------------------------------------------------------------------
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>forward_1337
--------------------------------------------------------------------------------
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-------------------------------------GGCATCTACTTCTCCTGCGC-----------------------
--------------------------------------------------------------------------------
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>reverse_3265
--------------------------------------------------------------------------------
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----------------------------------------------------------------CAGGCACAAGGCTTTT
TCCT----------------------------------------------------------------------------
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