>input_sequence_45936
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---------GAAAAATCCTTTCTTGGCTCG-----GCTAGGGTTTGCCTCTGCCTCTGTCTTCCGGCGGCCGGCGGCGAA
GCGACTCAGACGATGTCGAAGAAGAACAGCCTGTCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAGAGTACCGCCAC
CGCTCACCCTCTCCCTCTCTCCCTCTCCATCCTCTCCCCTGTCGCTTTCTTCCTCCATGGATCCGTAGCGGTCGAGAGGA
AGGGCCTGATTTGA-TTTGTTTCGGTTTTGAATTGATCGCG-------CGTGC-TGTGTGTGTGTGTCTACAGGGGAGAA
GAAGGCCAAGGAGGAGCAGGCCAAGAAGCTGCAGGCCAAGAAGTCCAAGATGAAGGTATGAGCTGCCCCTGCCTCCC---
-------CT---TTGTTGCTGTTAATCAGATTTGGATGCGCTGCTAGGCCACTCGTTAGTGAAATCAGCTTCCTGGCTGG
TGCTGCACTCTACTGGGTGCCTCCGTGTGTTAG------ATGAGCGTATCATGTG-------------------------
--------------------------------------------------------------------GTCTTTTGGTAC
ATGGAGCTCTGATTAGTGATGTTCATAG---GCTATGTGAGGTTGCAACCTTGTTGGGGTCTGTA---------------
--C-TTGTCTGCTGGGAAATTCACCAATTTGGCTCGATTCATAGAAAAGATGGA---------------CCTTTTTATTC
TTAGTGAGAGGATGACTGTTGGACTCTGTTAGAGTTCACACTCTTTGGCTTTGTTTAAGAA-----------GGAACACC
ATTTGTTTGGCCTAGATTACTGATGTGATCAGCCTGTGTTTAGAACAGGGTATATTCATAAGGATTAATTCACTTGGAAA
C-GTTACTGATCAATTCACTTGGAGTAATTTGCGTACTC-TCTCTTTCCAACTAGAAGTGTGACCTGACTGAGAGGTCTG
AAATGATTAGTGCAGATGCTTTTCTGGGAATGGTCTCCAGATTATCTCATTTCCCCCAAACC------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATGCATTTTCCTT
GAATTGCCTACCCCAAACCATCTCTGGGGATTTCCC-TGATTAATACAACCTGGCCTTTCTGCAGCACCTGTGCTGTTCT
TGAGCTAGTTAGCTGCCTCTATGTATGCACCATGGCACTTATTTTTGTTTTTGCGCATTGGCACTTCAAACTGCAATCCT
CTGTTGTTCGCTGTCGTAGCCAAACATTATGAGTCGAAGGACTAGTCAAGACTAGTCTATAGACTATGAGTTGCAACTCC
AGGGCCGACTACACTTTAGCGTCGACCAGTCTACGAGTCCCTCAGAACGACTCTTTGACTCGTA--AACCTTGGTTGTAG
CATTTGCTTGAATTTTTATCTGAACAACCTAGC--TTGCTACTACATCTGTGCTAATGCTAG-TCTGTTTCTC----TGC
CAATTCAGATTGATGGAAGCGATAAGAAGAAGAAGGGCAGCAGCTTCAAGGTCGGCAAGAAGAAGGTGAAGACAAAGCTC
TCAGCACTGGGAAAAGCCAAGGCCGCACAAGCCATGGAGCTCGACAACTGACTGATTCCCATGGCCTAAAACTGTTGCAC
CAATGCCGGTCATTTTGT-TGTAATCGTCGGAGAAATGAAGTTCATTTGCTCTGCCCAGGTCCATGTAGTCGAGCGGCGT
TAGATAGATATATAAGAGTTTTGGTACTTCTCCAGTCAGATCTTGCGGTTCCTGATCGTGTATGTTCCACCCCTTGAAAC
ATTTTATATGCTTCAGATGCC-----------------------------------------------------------
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>chr6A_1_TraesCS6A01G403600
TAGGATATCATACACGACTTGGGGCAAAATGTGTGTGAGATCGCACATCTGAAATCTTTTACAAATTAATGAGTATTGTC
CATAGTGTATCATAATTTTCATAGTTTGAAAGATGTTGCCACTCCACTAATGCATCAGCAAAAACAGATTTACCGCTAGA
AAGACTGGCAGACTCGTACTAAAATGACGCCGATCATATATCTCCGTTAATCGTCTGATGCATCTTATATAAGAATAAAA
TAAAGTGAGATTGATTTGT-ATTCTGAAAATTTGAAAGCACAACATTAATTATTAAAAAACATAAGTTTAATC-TATAAA
TATTTGGAATTTCATGAAATATATGTTTTT-TATAATAAAAATATTTTCAAAGGATATTTTTTCATATAGTTATTC----
--AATTTTTATTTGCAATCACGAAACTTA-CTCACATATTTCGCAATTAGTTATTCCGGCACCTCAGTAAACATGTCCAT
GTGGCTCATAAGATTTGTTTTAACGTTGTCTTAGAATAATGCTTATGCATTAAAAAAT---TGTTTTACAATTCATAAAA
CAATATT---TATCTCATAAAACCTAATGTCATGAACATTCTTCTTTGGGACCATGTGGATCAGCTTTT---GACGAAGA
ATGAAATTTTCT-AGAGATTTATTTATTTACAAGTAAACATCAACAACTATTCTTACCATAGTTCCATTTTGCTGGATAG
AACAACTTTGTAATCAACAATG----------TTCCATGCTCATTAGCCATGG-----AAAATTAAAAAGTAAAAAAATA
GGAAAATAAACAC--ATGGGAAATATAAAAAAAATGATAAAATCCTGGG-ATGAAAAAAGTAAACAAAATAATGAGAAAT
AAAGAAGAAGGAAAACCAATGAAAAACAAAAAGGAACAAATGTAAAAAAAG--AAAACTTCTGTAGCAAACGCAAAACAC
GCAGAGCAGGGCCCGGCCCAGTACACCTCGCTGTGG-CCGACGCGGCGCTTATTGCGGGAAGGTGGGGAGACGAG-----
---GAGGAAGAAAAATCCTTTCTTGGCTCG-----GCTAGGGTTTGCCTCTGCCTCTGTCTTCCGGCGGCCGGCGGCGAA
GCGACTCAGACGATGTCGAAGAAGAACAGCCTGTCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAGAGTACCGCCAC
CGCTCACCCTCTCCCTCTCTCCCTCTCCATCCTCTCCCCTGTCGCTTTCTTCCTCCATGGATCCGTAGCGGTCGAGAGGA
AGGGCCTGATTTGA-TTTGTTTCGGTTTTGAATTGATCGCG-------CGTGC-TGTGTGTGTGTGTCTACAGGGGAGAA
GAAGGCCAAGGAGGAGCAGGCCAAGAAGCTGCAGGCCAAGAAGTCCAAGATGAAGGTATGAGCTGCCCCTGCCTCCC---
-------CT---TTGTTGCTGTTAATCAGATTTGGATGCGCTGCTAGGCCACTCGTTAGTGAAATCAGCTTCCTGGCTGG
TGCTGCACTCTACTGGGTGCCTCCGTGTGTTAG------ATGAGCGTATCATGTG-------------------------
--------------------------------------------------------------------GTCTTTTGGTAC
ATGGAGCTCTGATTAGTGATGTTCATAG---GCTATGTGAGGTTGCAACCTTGTTGGGGTCTGTA---------------
--C-TTGTCTGCTGGGAAATTCACCAATTTGGCTCGATTCATAGAAAAGATGGA---------------CCTTTTTATTC
TTAGTGAGAGGATGACTGTTGGACTCTGTTAGAGTTCACACTCTTTGGCTTTGTTTAAGAA-----------GGAACACC
ATTTGTTTGGCCTAGATTACTGATGTGATCAGCCTGTGTTTAGAACAGGGTATATTCATAAGGATTAATTCACTTGGAAA
C-GTTACTGATCAATTCACTTGGAGTAATTTGCGTACTC-TCTCTTTCCAACTAGAAGTGTGACCTGACTGAGAGGTCTG
AAATGATTAGTGCAGATGCTTTTCTGGGAATGGTCTCCAGATTATCTCATTTCCCCCAAACC------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATGCATTTTCCTT
GAATTGCCTACCCCAAACCATCTCTGGGGATTTCCC-TGATTAATACAACCTGGCCTTTCTGCAGCACCTGTGCTGTTCT
TGAGCTAGTTAGCTGCCTCTATGTATGCACCATGGCACTTATTTTTGTTTTTGCGCATTGGCACTTCAAACTGCAATCCT
CTGTTGTTCGCTGTCGTAGCCAAACATTATGAGTCGAAGGACTAGTCAAGACTAGTCTATAGACTATGAGTTGCAACTCC
AGGGCCGACTACACTTTAGCGTCGACCAGTCTACGAGTCCCTCAGAACGACTCTTTGACTCGTA--AACCTTGGTTGTAG
CATTTGCTTGAATTTTTATCTGAACAACCTAGC--TTGCTACTACATCTGTGCTAATGCTAG-TCTGTTTCTC----TGC
CAATTCAGATTGATGGAAGCGATAAGAAGAAGAAGGGCAGCAGCTTCAAGGTCGGCAAGAAGAAGGTGAAGACAAAGCTC
TCAGCACTGGGAAAAGCCAAGGCCGCACAAGCCATGGAGCTCGACAACTGACTGATTCCCATGGCCTAAAACTGTTGCAC
CAATGCCGGTCATTTTGT-TGTAATCGTCGGAGAAATGAAGTTCATTTGCTCTGCCCAGGTCCATGTAGTCGAGCGGCGT
TAGATAGATATATAAGAGTTTTGGTACTTCTCCAGTCAGATCTTGCGGTTCCTGATCGTGTATGTTCCACCCCTTGAAAC
ATTTTATATGCTTCAGATGCCAAGATAATATGTGTTCTTGCCTAGTTGCCTTGCCAGCAACTCCCCATTCCTCTCTCTTT
CATCAACCTGCAACAA-GTTCCAATATGTCTCTGAATGTCTTCAGAGTGGACAAAACTCGCAATGCTCACTGCCTGC---
----GTACGCATACAGTATTATACAGTACAATACACGGTCTGCCGTCTGCATTTA-CTACAGTTTTGGCCTCCTTGGTAG
TACCTGTGACT-TGTGACTCA----GTATCCAAAACTGTACTGGCAGCACATGGCATCTCCAAGCTGTACAGCCTTGGAC
CCTTTCGGCGGCCTCTGAGAAGTCTAGTACGGCCGGGTACGTGCGCGCTGACGCGATCGCTC-TTGGGGGGAACTCAAGC
TTTTGGACGCTTTCTTT----CTTCCCATGCAAAAAAGATGAAGATTTTCTTTTATGAACTTTGGATCCTCTCCATGCAA
AAGAGATGAAGATTTCTTTGTACTTCTGAGCTTTTGGAC-----------------------------------------
------------------------CCTTTCCAGCAAAAAGATAGTATG---AAATTCGCTCCTTGGGACTACTGGATCTT
TTGGATGTCCTTTTTGTAGATTTTATTTAAGATGGAAAACATGGTTGATTTTTGTTTGTGCTGAAAATAATAAGTATCTT
TTGCGGTGGTAATGGCATTTTGTGATGTGACTATGGGGCTCCCGAACCCAACCAATAATTGCCATCCTGGCTTACGCGTC
AGCAGAGCCAACAATCCCTTTCTCCGTACCTGGTCAAGCCGGGGATCCTCTGTGCCCGTCATCTAC-GAGTGTTACACTA
TGGGA-TGCCACTTGAATCGAAC-AAAGTTAACAAACCCTACCGCCACTCCATCCAATAGCATCACA----A-TTCAGGC
TTATA---------ATGTATTTATTTTAAATAAAATTTGTGTACAGACATCGATACCCCTTGTCATAGCCTCGAGCCCCC
GACAAATTGTGTTTGTCGCCTTA-TTGGTTACATGTGGAAAGGTGTCAGGTGTTACTCACACGACAAGTATTCACCTTAT
ATGATC
>chr6D_1
TAGGATACCATACACGACGTGGGACCAAATGTATCTGAGATCGCATAATCAAAACCATTTACAAATTAATGAGTATTGGC
CATAAAGTATCATAATTTTCACGAGCCCAAAGATTTTGTCACTCCATTAATGCATGAGGAAAAACCAATTTATCACCGGA
AAAGCAGGATGACTAACATTAAAATGACGTCGATCATATATCTCCGTTAAACAGTCGATGCATCTTATATAAGAATAAAA
TAAAGGGAGTTTGATTTTGGATTTTGGAATTTTCAAAGCACGACATTAATCATCTAAAAAACAAGTG-TAAGC-TATAAC
TGCTTATTATTTCTTGAAATATATGTTTGTGTCTAATAAAAATACTTTCAAAGGATATTTAAAAAGTTTATGTAGTTCAC
CGACTTTTTATTTGCAATCACAAAAATTAGCTCGCATATTTCACAATCAATTATGGCGGCACCTCAGTAAT-ATGTCCAT
GTGGCTCATAATATTTGTTTTAGCGTTGTCTTAGAATAATGCTTCTGCATTTTAAAAA---ATATTTACAGTTCATAAAA
ACAATGTTTATATCTCATAAAACCTACTGTCATGAACATTCTTCTTTGGGACCATGTGGATCAGCATTCGACGACGAAGA
ATGAAATTTTTTAAGAGATTTATTTATCTACAAGTAAACATCGGCAACTATTCTTACCATAGTTCCGTTTTGCTGGATAG
AACAACTTTCTAATCAACAATGACAAAATTATTTCCACGCTCATTAGCAATGG-----AAAATGAAAAAATAAACATATA
GGAGAATAAAAAC--ATGGGTAATAGAAACTAAATAATAAAAACCCGGGAATAAAAAAACTAAACAAAATAATGAGGAAT
AAAAAAGAGA-AAAAACAATGAAAATGAAAAAGGAACAAATGAAACAAAAACAAATACTTGTGTACCAAACGCAAAACAC
--AGAGCAGGGCCCGGCCCAGTACGCCTGGCTGTGG-CCGACGCGGCGCTTATTGCGGGAAGGTGGGGAGAGGAG-----
---GAGGAAGA-AAACCTCTTCCTGGCTCA-----GCTAGGGTTTGCCTCTGCCTCTGTCTTCCGGCGGCCGGCGGCGAA
GTGACGCGG-CGATGTCGAAGAAGAACAGCCTCTCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAGAGTACCGCCAC
CA--------CTCCCTCTCTCTCTGTCTCTCCTCT-CCCTGTCACTTTCTTCCTCCATGGATCCGTAGCGGTTGAGAGAA
AGAGCCCGATTTGA-TTTGTTTGGGTTC-AAATTGATCGTGATTGCTGTGTGTCTC----------TCTCCAGGGGAGAA
GAAGGCCAAGGAGGAGCAGGCCAAGAAGCTGCAGGCCAAGAAGTCCAAGATGAAGGTATGAGCTGCCCCTGCATCCC---
-------CTGCTCTGACGCTGTTACTCGACTC-GGATGCGTTGCTAGACTGCTTGTTAGTGAAACCAGCTTCTTCATTGC
TGCTGCAGTGGTACTGTTGC-----TATTTCAGTTGAGCATGAGCATATCATGTG-------------------------
--------------------------------------------------------------------GTCTTTCGGTAC
ATGGAGCTCTGGTTAGCGATGTTTCTAGCTTGCTATGTGAGGTTGCAACCTTGTCGGAGTCCGTA---------------
--CTTTGTATGCTGGGGAATTCACCAGTTTAGCTAAATTCGTTGAAAAGAAGGATGAAACTTGCGACGGCCTTTTTATTC
TGAGCGGGAGGATCATGGTTGGACTCTGTTAGAGTTCATACTCTTTGGCTTTGTGCAAGAAT---TACAGCTGGAGCACT
GTTTGTTTGGCTCAGATTCCTGATGTGATCAGCCCGTGTTTAGAACAGGGTATGTTCAGAAGGACTAATTCACTTGGAAA
CCGTTACTGATTAATTCACTTGGAGGCATTTGCATACTCTTCTCTTCCCAACAAAAAGTGTGACCTGACTGAGAGGTCTG
AAATGATTAGTGCAGATGCATTTCTGGGAATGGTCTCAGGATTATCTCATTCCCCCCAAACCATGCGCGGTCTAAGTCTA
AGGAAATAAAAAAAATCGCTTATACAATTTCTTCTACATCGAATTTATATATCAGAATAGCGGATAGAGGCATCATTAAA
GGATTCAGGTCCATTTTTTTTCTTTTTAGAAAAGAAATGGAAATTATTTCGAAATCTAATGATTAGAATGCATTTTCCTT
GAATTGCCTACCCCAAACCATCTCTGGGGATTTCCC-TGATTAATACAACCTGGCCTTTTTGCAGCACCTGTGCTGTTCT
TGAGCTAGTTAGCTGCCTCTATGTATGCACCATGGCACTTATTTTTGTTTTTGCGCATTGGCACTTCAAACTGCAATCCT
CTGTTGTTCGCTGTCGTAGCCAAGCATTATGAGTCAAAGGACTAGTCAAGACTAGTCTATAGACTATGAGTTGCAACTCC
AGGGCCGACTACACTTTACCGTCGACTAGTCTATGAGTCCCTCAGAACGGCTCTTTGACTCGTATAAACCTTGGTTCCAG
CGTTTGCTTGAATTTTGATCTGAACAACCTAGC--TTGCT---ACATCTGTGCTAACGTTAGTTCTGTTTCTC----CGT
CTCTTCAGATTGATGGAAGCGAGAAGAAGAAGAAGGGCAGCAGCTTCAAGGTCGGCAAGAAGAAGGTGAAGACAAAGCTC
TCAGCCCTGGGAAAAGCCAAGGCCGCGCAAGCCATGGAGCTCGACAACTGACTCATTCCCATGGCCT-AAACTGTTGCAC
CAATGCCAGTCATTTTG-ATGTAATCGTCGGAGAAATGAAGTTCATTTGCTCTGGCCAGGTCCATGTAGTCGAGCGCCGT
TAGATAGATA----AGAGTTTTGGTATTTCTGATCTC-------GCGGTTTCTGACTGTGTATGATCCACCCCTCGAAAC
ATTTC---TGCTTCAGA-GCCAAGATAGTATGTGTTCTTGCCTAGTTTTTTGTCCAGCAACTCCCCATTTCTCTCTCTTT
CATCAACCTGCAACAAGGTTCCAATATGTCTCTGAATGTTTTCAGAACGGACAAACCTCACCATGCTCACTGCCTGC---
----GTACACATACAGTAT-ATACAGTACAATACACGGTCTGCCGTCTGCATTTA-CTACAGTTTTGGTTTCCTTG---G
TACCTGTGACTCTGTGACTCA----ATATCCAAAACTGTACTGGCAGCACATGGCATCTCCGAGCTGTACAGCCTTGGAC
CCTTTCGGTGGCCTCTGAGAAGTCTAGTACGGCCGGGTACGTGCGCGCTGACGCGATCGCTCCTTGGGGGGAACTCAAAC
TTTTGGACC----CTTT----CTTCCCATGCAGAAAAGATGAAGATTTTCTTTTATTGC---TGGATCCTTTCCA-GCAA
AAGAGATGAAGATTTCTT-GTACTTATGAGCTTTTGGAC-----------------------------------------
------------------------CCTCTCCAGCAAAAAGATACAGTATGAAAATTCGCTCCTTGGGACTAGTGAATCTT
TTGGATGTCCTTTTTGTTGATTTTATTTGAGATGGAAAACATGGTTGATTTTTGTGTGTGCTGAAAATGA----TATCTT
TTGCGGTGGTAATGGCATTTTGTGATGTGACTATGGGACTCCGAAACCCAACCAATAATTGCCATCCTGGCTTACGCGTC
AGCAGAGCCAACAGTCCCTTTCTCCGTACCTGGTCAAGCCGGGGATCCTCTGTGCCTGTCGTCGAC-GAGTGTTACACTA
TGG--CTGCCACTTGAATTGAAT-AAAGTTAACAAACCCTACCGCCACTCCATCCAATAGCATCACA----AATTCAGGC
TTATAGTTTTGAGTATGTATTTATTTTAAATATATTTCATGTAAAGACATTGACACA-CTTATCGTAGCCCCGAGAACCC
GACAAATTATGTTTGTCGCCTTTGTTGGTCACACGTGGAAAAGGTGTCAAGTG---------------------------
------
>chr6D_1
TAGGATAGCATACATGACTTGGGACAGAATGTCTCTGAGATCGTACATCCAAAACCTTTTATAAATTAATGAGTATTGGT
TATAATGTATCATAATTTTCACGGGCCCAAAGATGTTGTCAATCCACTAATGCAAAAGGAAAAACCAATTTACCAGAGTA
AGAGCAAAATGAGTACCACTAAAATGACGTTGGTTATATATCTCCGTTAACCATCCAATACATCTTATATAAGAATAAAA
TAAAGTAAGATTGATTTGT-ATTTTGAAACTTTTAAATCACAATATTTATTATGTAAAAAATATAACTGTATCTTATAAA
TGTTTAACATTTCATATAGTATATGCTTGTATATCATAAAAATATTTTTAAATTATATTTAAAAAGTTGATGTCGTTCAT
CGACTTTTTGTTTGTAATCATAAAAATTAGTTCGCATATTCGTG-ATTAATTATGCCGGCACCTCAGTAAACATGTCCAT
GTGGCTCATAAGATTTGTTTTAACATTGTCTTAGGATAATGCTTATGCATTTTTAAAACAATGTTTTACATTTAATAAAA
ATAATGTTTATATCTCATAAAACTTAATGACATGAACATTCTTCTTTGGGACCATGTGGATCAGCTTTT---GACCAAGA
ATGAAATTTTGT-AGAGATTTATTTATTTACAAATAAAAATCAACAACTATTCTTACCATAGTTCTGTCTTGCTGGATAG
AACAACTTTGTAATTGACAATGACAAAATTGTTTCCACGCTCATTAGTAATGGGAAGAAAAATTAAAAGGTAAAAATGTA
GGACAATATAAACAGATGGGTAATAGAAACTAGATAATAAAATCCTGGGAATAAAAAAATTAAACAAATAATGA--GAAT
AAAGAAGAGA-AAGAGCAACGAAAATGAAAAGGGAACAA-----------------------------------------
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>chr6B_929
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--------GGGCCCAGCCCAGTAGACCTCGCTGCGGCCCGACGCGGCGCTTATTGAGAGGAGGGAAAGAGGTCGGCCTCG
GGAGAGGAAGA-AAACCTCTTCCTGGGGCGTGGCTGCTAGGGTT------TGCCTCTGTCTTCCGGCGGCCGGCGGCGAA
CGGATTCAGACGATGTCGAAGAAGAACAGCCTCTCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAGAGTACCGCCGC
AA--------------CTCACCCTCTCTCTCTCCT-CCCTATCGCTTTCTTCCTCCATGGATCCGTAGCGGTTGAGAGAA
AGAGCCCGATTTGATTTTGTTTGGGTTT-GAATTGATGGTGATTGCTGTGTGTGTGTGTGTGTGTGTCTGCAGGGGAGAA
GAAGGCCAAGGAGGAGCAGGCCAAGAAGCTGCAGGCCAAGAAGTCCAAGATGAAGGTATGTGCTGCCCCTCCCTCCC---
-------CTGCTTTGACGCTGTTACTCGACTTGGGATGCGTTGCTAGGCTGCTTGTTAGTGGAATCAGCTTCTTGATTGG
TGCTGTGCTGCTACTGTTGC-----TGTGTTAG------ATGAGCATATCATATGGTCTTATATGATCTTTTGGTACACG
GAGCTCAGCTTCCTGACTGTGTGCTGCACTGCTACTGGGCGCCTCTGCATTTTAGATGAGCATATCATGTCTTTTGGCAC
ATGGAGTTCTGATTAGTGGTGTTTTTAGCTTGCAATGCTATGTTGCAACCTTGTTGGAGTGTATACC------TAAAGTT
GCC-TTGTCTGCTGGGGAATTCACCAATTTGGCTCGATTAGTAGGAAAGAAGGATGAAAATTGCGACGCCCTTTTTATTC
CGAGCGAGAGGATG----------------------------------CTTTGTTTAAGAATTAGTACAGCTGGAATACC
GTTTGTTTGGCTCAGATTCCTGATGTGATCTTCCTGTGTTTAGAACAGGGTATATTCATAAGGATTAATTCACTTGGAAA
CCGTTACTGATCAATTCACTTGGAGACATTTGCATACTCTT-TCTTTCCAACTAGAAGTGTGACCTGACTGAGAGGTCTG
AAATGATTAGTGCAGATGCTATTCTGGGAATGGTCTCCAGATTATCTCATTTCCCCCAAACC------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATGCATTTTCTTT
GAATTGCCTGCCCCAAACCATCTCTAGGGAGTTCCCTTGATGAATACAACCTGGCCTTTTTGCAGCACCTGTGCTGTTCT
TGAGCTAGTTAGCTGCCTGTATGTATACACCTTGGCACTTCATTTTGTTTTCGCGCAGCGGCTCTTCAAACTGCAATCCT
CTGTTGTTCGGTGG------------------------------------------------------------------
---------------------------------------------------------------------------TGTAG
CGTTTGCTTGAATTTCGATCTGAACAAACCTGAATTTGCT---ACATTCATGCTAACGATACTTCTGTTTCTCTGTGCGT
CTCTTCAGATTGATGGCAGCGATAAGAAGAAGAAGGGCAGCAGCTTCAAGGTGGGCAAGAAGAAGGTGAAGACAAAGCTC
TCCGCACTGGGAAAAGCCAAGGCCGCGCAAGCCATGGAGCTCGACAACTGACTGACTCCCACGGCCT-AAACTGTTGCAC
CAATGCCGGTCATTTTTTATGTAATCGTCCGAGAAATGAAGTTCATTTGCTCTGGCCAGGTCCATGTAGTCGAGCTGCGT
TAGATAGATA----AGAGTTTTGGTATTTCTCCAGTCAGTCAGA-----TCCTGATCGTGTATGATCCACCCCTCGAAAC
ATTTC---TGCTTCAGCTGCCAAGATCATGTGTGTTCTTGCCTAGTTGCCTGACCAGCAACTCCCCATTCCTCTCTCTTT
CACCAGCCTGCAACAAGATCCCAGTATGTTTCTGAATGTATTCAGAACGGACAGACCTCACCATGCTCACTGTATTGCAG
TGCAGTACACGCACTGTGT-ATAC-GTACAATACCCGGTCTGTCTGTATTTCTCTGCTGCAGTTTTTGTTTCCTTGGTAG
TACCTGTGACTCTCTGACTCTGAAGATATCCAAAACTGTAGTGGCAGCACATGGCATCTCCGAGCTGTACAGCCTTGGAC
CCTTTCGGCGGCCTCTGAGAAGTCTAGTACGGCCGGGTACGTGCGCGCTGACGCG------------GGGGAACTCAAGC
TTTTGGACC----CTTTCTTCCTTCCCATGCAAAAAAGATGAAGATTTTCTTTTATCAACTTTGGATCCTCCCCATGCAA
AAGAGATGGAGATTTTCT-TTTATTATGAGCTTTTGAATCCTTTCCAAGCAAAAGAGATGGAGATTTTCTTGGAGTAGTA
CTTGTGAACTTTTGGATTTTGCATCCTATCCAGCAAAAAGATATGAA---------------------------------
-----------------------------------------------ATTTTCGTTTGTGCTGACAAAATGATAT---TT
TTGCGGTGGTAAAGGCATTTTGTGATGTGACTATGGGCTCTTGAAACCCAACCAATAATTGCCATCCTGGCTTACGCGTC
AGCAGAGCCAACAGTCCCTTTCGCCGTACCTGGTCAAGCCGGGGATCCTCTGCGCCCGTCATCTACTGAGTGTCACACTA
TGGGGCTGCCACTTGAGCTGAACAAAAGTTACCAAACCCTACTGCCACTCCATCCAATCCAATAGTATCACAATTCAGGC
TTACAATTTTGAGTATGTATATATTTCAAATATATTTTGTGTAAAGGCATCGATACA-CTTGTCGTAGCCCCGAGCCCCC
GGCAAATTACGTTTGCTGCCTTG-TTGGGTACACATGGGAAGGTGTCGAGTGTTACTCAGATGAAAATATCACC------
------
>chr1B_1176
TCC-----------------------------------------------------------------------------
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--------------------------------CCT-CCATGTCGGTTTCTTTCTCCATGGATCAGTAGCGGTTCAGATGA
AGAGCGTGATTTGA-TTTGTTTGGGTTT-GAATTGATCATG-----------TGCGTGTGCGTGTGTTTACAGGGGAGAA
GAAGGCCAAGGAGGAGCAGGCCAAGAAGCTGCAGGCCAAGAAGTCCAAGATGAAGGTATGTGCTGCCGCTTCCTCGTTCT
TCCCCTACT---TTGGCATTGTTACTCGACTC-GGATGTGTTGCTAGACTGCTTGTTAGTGGAATCAGCTTCTTGATTGG
TGCTGTGCTGCTACTGTTGC-----TGTGTTAG------ATAAGCATATCATGTA-------------------------
--------------------------------------------------------------------GTCTTTTGGTAC
ATGGAGTTCTGATTAGTGGTGTTTTTAGCTTGCTATGCTAGGTTGCAAACTTGTTGGAGTGTGTACACACACTTAAAGTT
GCC-TTGTCTGCTGTGAAATTCACTAATTTAGCTAACTGTTG--------------------------------------
-------------GACTGTTGGACTCTGTTAGAGTTCATACTCTTTGCCTTTGTGCAAGAAT---TACAGCTGGAGCACC
GTTTGTTTGGCTCAGATTCCTGATGTGTT---------------------TATATTCAAAAGGACTAATTCACTTGGAAA
CCGGTACTGCTTAATTCACTTGGAGACATTTGCATACTCTTCGCTTCCCAACTACAAGTGTGACCTGACTGAGATGTCTG
AAATGATTAGTGCAGATGCTTTTCTGATAATTGTTTCCACATTATCT---------------------------------
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>chr5B_1186
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---------------------------------------TGTCGGTTTCTTTCTCCATGGATCAGTAGCGGTTTAGATGA
AGAGCGTGATTTGA-TTTGTTTGGGTTT-GAATTGATCGTG-------TGTGTGTGTGTGTGTGTGTTTACAGGGGAGAA
GAAGGCCAAGGAGGAGCAGGCCAAGAAGCTGCAGGCCAAGAAGTCCAAGATGAAGGTATGCGCTGCCGCTTCCTCGTTCC
TCCCCTGCT---TTGGTGCTGTTACTCGACTC-GGATGTGTTGCTAGACTGCTTGTTAGCGGAATCAACTTCTTGATTGG
TGCTGTGCTGCTACTGTTGC-----TGTGTTAG------ATAAGCATATCATGTA-------------------------
--------------------------------------------------------------------GTCTTTTGGTAC
ATGGAGTTCTGATTAGTGGTGTTTTTAGCTTGCTATGCTAGGTTGCAACCTTGTTGGAGTGTGTACACACACTTAAAGTT
GCC-TTGTCTGCTGTGAAATTCACTAATTTGGCTGACTGTTG--------------------------------------
-------------GACTGTTGGACTCTGTTAGAGTTCATACTCTTTGCCTTTGTGCAAGAAT---TACAGCTGGAGCACC
ATTTGTTTGGCTCAGATTCCTGATGTGTT---------------------TATATTCAGAAGGACTAATTCACTTGGAAA
CCGTTACTGCTTAATTCACTTGGAGACATTTGCATACTCTTCTCTTCCCAACTACAAGTGTGACCTGACTGAGATGTCTG
AAATGATTAGTGCAGATGCTTTTCTGATAATTGTTTCCACATTATCTC--------------------------------
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------
>SNPs
-------S---------------S--------S-S--------------SS---S-----------------------S-
----S----------------SS-SSSS----------S----------------S--S------SS-------S-SS--
--SS-S--SS----SSS------------S--------------------S-S--S------------------------
-----------------------S-----S---S-------------------SS-----SSS--SS-------------
-S---SSS--------------------S-------------------------------SSSS-SS-SS-SSSSS----
---S-----------------S---S-------S--------S------S----S-------------------------
---------------------------------------------------SS----S------------S---------
SS-SSS--------------------------------------------------------------------------
----------S-------------------------------------------------------S-------------
-------------------------------------S----------S---------------------------S---
---S------S---------S----S---SS----S----------------S------S----------------S---
--------SSS----S---------SS---------------S--S----S----S----S----S--------------
SS---------------------------------------------------------------------S--------
-----------S---S-SS---S---------------------------------------------------------
-S------------------------------S-----------------------------------------------
-SSSSSSSSS-----------------SS------S------------------------------------S-------
--S-------------------S-----S----------S--------S---S---------------------------
--------------------------------------------------------------------------------
---------------S--------S--SSS--S-------S--------SS--S------------------S--SS---
---------SSSSSS-S---SSSSS--------------------S----------------------------------
--------------------------------------------------------------------------------
-----------------------SS--------------------------------S----------------------
----------------------------------------S---------S-----------------------------
-S--S---------------------------------S-----------------------------------------
-----------SS-----S-------------------------------------------------------------
-------------------------SS------S----------------------------------------------
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-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-----------------------S-----------S--------------------------------------------
------------------S-------S------S---------------S------------------------------
-S--------------S-----------------------SSS-------------S-S------------------S-S
-SS-----------------------------------------------------------------------------
--------------------------S----------------------------------------S------------
------------------------------------------------------S-------------------------
----------SSSS------------S------------SSSSS--------------------S---------S-----
----SSSS-------------------------------------------SS---------------------------
---------------------------------------S------SS-------S---S-S------------------
--------S----------S------------------------------------------------SS----------
-------------------------S-----------------------------------S------------------
--------------------------------------------------------------------------------
--------SSSSS-------------------------------------------S-----------------------
------------------S------S------------------------------------------------------
---------------------------S---------------SS--S-----------------------S--S-----
-----------------S----------S-----------------------------------------S-SS------
-------------------------------------S----SS------------------------------------
-------------S------------------------------------------------------------------
----S-------------S-------------------------------------------------------------
--------------------------------S-S--------S------------SS------S-----S---------
--------S-------------S----------S-------------SS----------S-S--S--SSSSS-SSSSSSS
SSSSSS
>forward_962
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTAGCAAACGCAAAACAC
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_3001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TCTTGCGGTTCCTGATCGTG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1229
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TCTCCCTCTCTCCCTCTCCA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_3003
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TTGCGGTTCCTGATCGTGTA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1333
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTTGAATTGATCGCGCGTGC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------
>reverse_3004
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------TGCGGTTCCTGATCGTGTAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_1535
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GCTGG
TGCTGCACTCTACTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>reverse_3798
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GCTCCCGAACCCAACCAATA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
