>input_sequence_45923
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----------------------------------------ATGGAGGCCACGGCGCCCGACTACTACGCCCGCGACAAGA
AGGGCTCCGACCTCTTCGTCGTCGACGACCTCCTCGCGCTGCCGTGCGACGACGAGGAGGAGGAGGAGGAAGGGGTGGGC
GACGCGCCGTTCCTGCCGGC---------CAAC---------GCCGCCTCCGCCGCCGCAGTCGTCGTCAAGCAGGAGGC
CGGGTTCGGGAACGCGTCGGCCGACTCGTCCACCGTCACGGCCCTCGACAGCTGCAGCAACTCCTTCTCCGGC---CTCG
CCGACGGCGACTTCTCCGGCGGCCTCTGCGAGCCGGTAAATTCTCCATCCATCCTTCTGTTGTGCTCCTTTTTCGTATCG
CATCATCAATTGTTCGTCGGAATTCTTCTCCGCTAATTAACTGAACGACTTTACGTTTTTTCCGTCCTTATTAATCTCTT
CCATTTACACGAGGCAAATTCATGGAAAAATGCATATACGGA----TATTTAAGAGTGATTTCACGATAAATAGTCCGCA
ATTAAACCGCTCCAAAAAATATCCTCCACAATTACGCATGAA--------------------------------------
--------------------------------------------------------------------------------
---------TGCAGTTTTCTCTCGCAGAGAGAGTAACCGAAATAGGAAACAGCTGCCACGCGTAAACGGCACTGCACACT
ACCAAAAATAGCAGCTTTCGCGTTCAGCGCTAGCTGGACGCTTCCGTATGCGCACAAGAATTCGAGTGGCTTTCCAAGTT
TTTAGCTTAACAATTATGGAGTTCTCGAAACGAAGCAAATTACTGAACACGCATGCATGAGCTGTTGCTAATCAAACTTG
ATGTGAATTGTGCGCAGTACGATCAGCTGGCGGAGCTGGAATGGCTGTCCAACTACATGGGCGAGGGCGAGGAGAGCTTC
GCCACGGAGGACCTACACAAGCTGCAGCTCATCTCTGGCATCCCCTCCGGCGGCTTCCCCTCGGCGAACGGGCCGCCTGC
TCCGGCGGCCACCGCTGCCACGGCGCAGCCCGGCGTGTTCCTGCCGGAGGGCC---------------------------
---------------CCGTCCCCGCCAAGGCCCGTAGCAAGCGCTCCCGCGTTGCGCCGGGCAACTGGTCGTCCCGCCTG
CTCGTTCTCCCGCCGGCCCCGGCCTCCCCGCCGTCCCCGGCGTCCATGGCCATCTCGCCGGCGGAGTCTGGCGTCTCAGC
CCAGGCGTTCCATGT---------CAAGAAGCCTTCCAAGCCGGCCAAGAAGAAGGAGGTGCCGCCGCAGGCGCAGGCAC
AGGCTCAGACTCAGTCGGTGAGCGCGCCCACAGCGCCTTCGGGCGTCACGGCGGCGGCCAACGAAGGTCGGCGGTGCCTG
CACTGCGAGACGGACAAGACGCCGCAGTGGAGGACGGGGCCCATGGGCCCCAAGACGCTGTGCAACGCGTGCGGGGTGCG
CTACAAGTCGGGGCGGCTGGTGCCGGAGTACCGCCCGGCCGCGAGCCCGACGTTCGTGACGTCGAGGCACTCCAACTCCC
ACCGCAAGGTGCTCGAGCTCCGCCGCCAGAGGGAGAT---------GCACCACCACCACCAGCCGTCGCAGCTCCAGCAG
CACGCGGTCGCCGGCGGCGTCGGGAGGATAATGCACATGGAGAGCCACCTGCTGTTCGATGGGCCGGCGGCGCCGCCCAT
CCTCGGCGGCGGCGACGACTTCTTGATCCACCACCGCCTAGGGACGGCAGACTACCGGCAGCAGCTCATCTAG-------
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---------------------------------------------------------------------------
>chr3A_1_TraesCS3A01G274900
CTCATCAGGTGAGAGTCAAGACCAACTTGCATAAGCGGTATGTCGTCAAAGTACCCCAAAAGCCCTAGAAAGTGGAGATG
CCCTTAATTCGCCGAATTACCTGCATTCCAAAGATGAAAAGGCCTTGCAAGAGCAAGAGTTTGTATCCACCTAGCCTCCT
ATAACAACCTCCC-CTTTCCATCCATTCATTTCATAACAGCCTGCTACTTCCTCTTGCTCACCGTTTCCCAAAGTTCAGT
TGAGTTG-----GCAAGTAAAACCGCCGCTGGTCTAACGGAGCAGTTTGCGACGCGAGTACCCTCCGAGC-----TAGCT
TACGATTTGAACTCCTCTTTCTGGACGGCAAACCTTCCCCGTACGGTGAAAAAAGGAAGCTTCGCAGCAGGTTCCAAGGA
GACGG-------GCGAACGGCAATCCCGATCAACCCTGAAGCAA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AGAGAGAGAATTACC
CCCACGTGACCTGACGGCACCCCACAAAATCCACCTGCGTCGCCA-----GACGCGACGTGAAACTCCAGTCCAGCCGCG
G--GCCGCGGTTGTAGCCAGCAGTGGCTGCCTCGCACGACGCGCGCGGCGCAGGCAGCAAAGAATATGCTTGGCGGAGCC
GAGGATAAACCGTAAAACAGGTTGCTGGGCCTGGGATTACTACCAAGTAACTTTGGAACCCGATAAGTTTTACTGCTCGG
ATAAAAAGGG----------------TGCTGGCTAGGCCGGGGGCGGGGGCGGGGCCGGAGGGTGGGGCGGGG---GGCA
CTGTTGGTGGTGCATGCCTCTGTGGCTCTCGCTGCTCTTGGCTTTATTTACTCCTTAAGAATCGTTCCCTACAGCTGACC
TCT-CCTCCTC-AGCTCCACGCCAATTAAACCCTACTACTCCTGCTACCAGCACTCCTCCTCTCGCCCCCCTCGCGTTAT
CTCCGCCCCCCTCGCGCAGCCCACGTACAAAACCAAACAAAAAAGCGCCGAGCAAC-------------GCAGCGCCGCA
GATAGAATCGTTGCGTGCGTCCACCGCTCTCGCGGCGGCCATGGAGGCCACGGCGCCCGACTACTACGCCCGCGACAAGA
AGGGCTCCGACCTCTTCGTCGTCGACGACCTCCTCGCGCTGCCGTGCGACGACGAGGAGGAGGAGGAGGAAGGGGTGGGC
GACGCGCCGTTCCTGCCGGC---------CAAC---------GCCGCCTCCGCCGCCGCAGTCGTCGTCAAGCAGGAGGC
CGGGTTCGGGAACGCGTCGGCCGACTCGTCCACCGTCACGGCCCTCGACAGCTGCAGCAACTCCTTCTCCGGC---CTCG
CCGACGGCGACTTCTCCGGCGGCCTCTGCGAGCCGGTAAATTCTCCATCCATCCTTCTGTTGTGCTCCTTTTTCGTATCG
CATCATCAATTGTTCGTCGGAATTCTTCTCCGCTAATTAACTGAACGACTTTACGTTTTTTCCGTCCTTATTAATCTCTT
CCATTTACACGAGGCAAATTCATGGAAAAATGCATATACGGA----TATTTAAGAGTGATTTCACGATAAATAGTCCGCA
ATTAAACCGCTCCAAAAAATATCCTCCACAATTACGCATGAA--------------------------------------
--------------------------------------------------------------------------------
---------TGCAGTTTTCTCTCGCAGAGAGAGTAACCGAAATAGGAAACAGCTGCCACGCGTAAACGGCACTGCACACT
ACCAAAAATAGCAGCTTTCGCGTTCAGCGCTAGCTGGACGCTTCCGTATGCGCACAAGAATTCGAGTGGCTTTCCAAGTT
TTTAGCTTAACAATTATGGAGTTCTCGAAACGAAGCAAATTACTGAACACGCATGCATGAGCTGTTGCTAATCAAACTTG
ATGTGAATTGTGCGCAGTACGATCAGCTGGCGGAGCTGGAATGGCTGTCCAACTACATGGGCGAGGGCGAGGAGAGCTTC
GCCACGGAGGACCTACACAAGCTGCAGCTCATCTCTGGCATCCCCTCCGGCGGCTTCCCCTCGGCGAACGGGCCGCCTGC
TCCGGCGGCCACCGCTGCCACGGCGCAGCCCGGCGTGTTCCTGCCGGAGGGCC---------------------------
---------------CCGTCCCCGCCAAGGCCCGTAGCAAGCGCTCCCGCGTTGCGCCGGGCAACTGGTCGTCCCGCCTG
CTCGTTCTCCCGCCGGCCCCGGCCTCCCCGCCGTCCCCGGCGTCCATGGCCATCTCGCCGGCGGAGTCTGGCGTCTCAGC
CCAGGCGTTCCATGT---------CAAGAAGCCTTCCAAGCCGGCCAAGAAGAAGGAGGTGCCGCCGCAGGCGCAGGCAC
AGGCTCAGACTCAGTCGGTGAGCGCGCCCACAGCGCCTTCGGGCGTCACGGCGGCGGCCAACGAAGGTCGGCGGTGCCTG
CACTGCGAGACGGACAAGACGCCGCAGTGGAGGACGGGGCCCATGGGCCCCAAGACGCTGTGCAACGCGTGCGGGGTGCG
CTACAAGTCGGGGCGGCTGGTGCCGGAGTACCGCCCGGCCGCGAGCCCGACGTTCGTGACGTCGAGGCACTCCAACTCCC
ACCGCAAGGTGCTCGAGCTCCGCCGCCAGAGGGAGAT---------GCACCACCACCACCAGCCGTCGCAGCTCCAGCAG
CACGCGGTCGCCGGCGGCGTCGGGAGGATAATGCACATGGAGAGCCACCTGCTGTTCGATGGGCCGGCGGCGCCGCCCAT
CCTCGGCGGCGGCGACGACTTCTTGATCCACCACCGCCTAGGGACGGCAGACTACCGGCAGCAGCTCATCTAGACGAGTC
GTCAGTCTGTTAGAACTGATCAGTTTAGCCCAGAAATAATAATTAAAAGCAGCTAAAACCCCAAGAGCCGGAAATATCGG
AAGAACTGCAAATGTTTGCTTAT---TAGGAGTTATATTTTCCCAGTTTTCTCTCTGCTTCCGTTTGGTTAGCCCGTGTG
CTTTTTGTTGAGCTCGAAATTTTCGTGTCCATTTAGTTCATGATCCTCCCCAGTTTCCCGCTTGATTAGTTCACTCCTAA
TTACCCCTCAGAAACTAATTCTAGGGCGTTGAGTCCTTTTA-TTTCTTAGCATTTTGTAATACAAA-TACTTTTCGTTTC
GATTTTTGCTTCTTTTTCTGCGCCTAGCTAGAATATGAAAACAATCTTTTCGGCCAATTGTTGGATCGAGATAACTCCCA
TTCATGCAAATCTCCAGTCCAGCAGATAGCTTTGGCATGGTATGAGTATGATGGTAAGCAAGGATGAATCTCATGGCTGC
TCCCTCCGCTCTGGC-----------------------ATGCGTGCACTCATGTCACAGATGTTGTGTGCGCAACCGAAC
GAGCAAAGTTACCTGAGGGAGGAGGCGGCGAGAGTGCCATTGCCCACCCACCATCGCTCCATCAGTCCGTCCGTCGGAAC
TCAC----ACGGGATGATTAGGTTAGAGTCTCGCGTGAAAAAAAGATGCCCTCTCGCTCGTTGGATCCAATCAGAGCGTC
CTCCTTTGGTCCTGGCCTGTAGGCGTTGCCTGGTGGTGG---TGCTGTTGGGGGTAACTAGGGTTCATCATTGCGCTGCT
GCAGGCTGCACCTCGCACGGGGTACCACCTTTCCGTGG-----GTTTCTGGATAAGCAGCGTCATTCACACACACACCCT
CGCTGCTGCAACCTCGCCTGGATT-GCCATTGCCAAGTGGCCTGGTGAAGCGTCGTTTT-ACCTCGCCGTAACCAACACT
GACTGCCGTCAGAGGTCAGAACTCAGAAGGGCAGCACAATGCCAGAAACTAAGCAGGCCACCGTACTCCAACGAC
>chr3D_11
----------GACAGTCAAGACCAACTTGCAGAAGTGGTATGTCGTCCAAGTACCCCAAAAGCCCTAGAAAGTGGAGACG
CCCTTAATTTGCCAAATTACCTGCATTCCATGGATGAAAAGGCCTTGCAAGAGCAAGAGTTTGTATCCACCTAGCCTCCT
ATAACAACCTTTCACTTTCCATCAATTCATTTCATAACGGCCTGTTATTTCCTCTTGCTCACCGTTTCCCAAAGTTCAGT
TCAGTTGAGTTGGCAAGTAAAACCGCCGCTGGTCTATCGGAGCAGTTTGCGA-------ACCCTCCGAGC-----TAGTT
TACGATTTGAACTCCTCTTTGTGAACTGCAAGCCTTCCCCGTACGGTGAAAAAAGGAAGCTTCGCAGCAGGTTCCAAGGA
GACGGGCGCGGAGCGAACGGCAATCCCGATCACCCTGAACCAAACACT--------------------------------
--------------------------------------------------------------------------------
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----------------------------------GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTACC
ACCACGTGACCTGACGGCACCCCACAAAATGCACCTGCGTCGCCAGACGCGACGCGACGTGAAACTCCAGTCCAGCTGCG
GGCGCCGCGGTTGTAGCCAGCAGTAG-TGCCTCGCAGGATGCGCGCAGCGCAGGCAGCGAAGAATATACTTGGCGGAGGC
GAGGATAAACCGTAAAGCAGGTTGCTGG---------------------------------GATACGTTTTACTGCTGCT
GATAATAACCGGCCGTGGCGTTTTACTGCTGGCTA------GGCCGGGGGCGGGGCCGGAGGGTGGGGCGGGGCGGGGCA
CTGTTGGTGGTGCATGCCTCAGTGGCTCTCGCTGCCCTTGGCTTTATTTACTCCTTAAGAATCGTTCCCTACAGCTGACC
TCT-CCTCCTCCAGCTCCACGCCAATTAAACCCTACTACTACTGCTACCAGCA---CTCCTCTCG--CCCCTCGCGTTAT
CTCCGCCCCCCTCGCGCAGCCCACGTACAAAACCAAACAAAAAAGCGCCGAGCAAC-------------GCAGATAGAGA
ATTGCGGTGC----------CCACCGCTCTCGCGGCGGCGATGGAGGCCACGGCGCCCGACTACTACGGCCGCGACAAGA
AGGGCTCCGACCTCTTCGTCGTCGACGACCTCCTCTCGCTGCCGTGCGACGACGAGGAGGAGGAGGAGGAAGGGGTCGGC
GAGGCGCCGTTCCTGCCGGC---------CAAC---------GCCGCCGCCG---------TCATCGTCAAGCAGGAGGC
CGGGTTCGGGAACGTGTCGGCCGACTCGTCCACCGTCACGGCCCTCGACAGCTGCAGCAACTCCTTCTCCGGC---CTCG
CCGACGGCGACTTCTCCGGCGGCCTCTGCGAGCCGGTAAATTCTCCGTCCTTC---------TGCACCTTTTTCGTATCG
CATCATCAATTGTTCGTCGGAATTCTTCTCCGCTAATTAACTGAACGACTTTACGTTTTTTCCGTCCTTATTAATCTGTT
CCATTTACACGAGGAAATTCCATGGAAAAATGCATATACTACGGATTATTTAAGAGTGATTTCACAATATATATTCCGCA
ATTAAACCACTCCAAAAAATATCCTCCACAATTACGCATGAA--------------------------------------
--------------------------------------------------------------------------------
---------TGCAGTTTTCTCTCGCAGAGAGAGTAACCGAAATAGGAAACAGCTGCCACGCGTAAATGGCACTGCACACT
ACCAAAAATAGCAGCTTTCGCGTTCAGCGCTAGCTGGACGCTTCCATATGCGCACAAGAATTCGAGTGGCTTTCCAAGTT
TTTAGCTTAATAATTATAGAGTTGTCGAAACGAAGCAAACTC----ACACGCATGCATGAGCTGTTGCTAATCAAACTTG
ATGTGAATTGTGCGCAGTACGATCAGCTGGCGGAGCTGGAATGGCTGTCCAACTACATGGGCGAGGGCGAGGAGAGCTTC
GCCACCGAGGACCTACACAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGCGGCTTCCCCTCGGCGAACGGGCCGCCTGC
TCCGGCGGCAACCGCTGCCACGGCGCAGCCCGGCGTGTTCCTGCCGGAGGGCC---------------------------
---------------CCGTCCCCGCCAAGGCGCGTAGCAAGCGCTCCCGCGTTGCGCCGGGCAACTGGTCGTCCCGCCTG
CTCGTTCTCCCGCAGGCCCCGGCCTCCCCGCCGTCCCCGGCGTCCATGGCCATCTCGCCGGCGGAGTCTGGCGTCTCAGC
CCAGGCGTTCCATGT---------CAAGAAGCCTTCCAAGCCGGCCAAGAAGAAGGAGGTGCCGCCGCAGGCGCAGGCAC
AGGCTCAGGCTCAGTCAGTGAGCGCGCCCACAGCGCCCTCCGGCGTCACGGCGGCGGCCAACGAAGGTCGGCGGTGCCTG
CACTGCGAGACGGACAAGACGCCGCAGTGGAGGACGGGGCCCATGGGCCCCAAGACGCTGTGCAACGCGTGCGGGGTGCG
GTACAAGTCGGGCCGGCTGGTGCCGGAGTACCGCCCGGCCGCGAGCCCGACGTTCGTGATGTCGAGGCATTCCAATTCCC
ACCGCAAGGTGCTGGAGCTCCGCCGCCAGAGGGAGAT---------GCACCACCACCACCAGCCGTCGCAGCTCCAGCAG
CACGCCGTCGCCGGCGGCGTCGGAAGGATAATGCACATGGAGAGCCACCTGCTGTTCGACGGGCCGGCGGCGCCGCCCAT
CCTCGGCGGCGGCGACGACTTCTTGATCCACCACCGCCTAGGGACGACGGACTACCGGCAGCAACTCATCTAGACGAGTC
GTCAGTCTATTAGAACTGATCAGTTTAGCTCAGGAATAATAATGAAAAGCAGCTAAAACCCCAAGAGCCGGAAATATCGG
AAGAACTGCAAATGTTTGCTTATTACTAGGAGTTATATTTTCCCAGTTTTCTCTACC---CCGTTTGGTTAGCCTGTGTG
CTTTTTGTTGAGCTCGAAATTTTCGTGTCGATTTAGTTCATGATCCTCCCCAGTTTCCCGCTTGATTAGTTCACTCCTAA
TTACCCCTCAGAAACTAATTCTAGGGAGTCGAGTCCTTTTATTTTCTTAGCATTTTGTAATACAAAATACTTTTCATTTC
GACTTTTGCTTCTTTTTCTGCGCCTAGCTAGAATATGAAAACAAGTTTTTCGGCGAATTGTTCGATCGAGATAACTCCCA
TTCATGCAATCTCA-AGTCCAGTAGATAGCTTTGGCATGGTATGAGTATGATGGTAAGCAAGGATGAATCTCGTGCCTCC
TCCCTCCGCTCCGGCATGCACTTGCAGTTGCAGCAGCCATGCGTGCACTCATGTCACAGATGTTGTGTGCGCAACCGAAC
AAGCAAAGTAAACACAAGGAGGAGGAGGCGAGAGTGCCATTGCCCACCCACCATGGCTCCATCAGTCCGTCCGTCGGAAC
TCAC----ACGTGATCATTAG--TAGAATCTCGCGTGAAAAAAAGATGCCCTCTCAGTCGTTGGATCCAATCAGAGCGTC
CTCCTTTGGTCCTGGCCTGTAGGTGTTGCCTGGTGGTGG---TGGTGTTGGGGGTAACTAGGGTTCATCATTGCGCTGCT
GCAGGCTGCACCTCGCGCGGGGTACCACCTCTCCGTGGAGAGCGTTTCCGGATAAGTGGGGTCATTCACAGC----CCCT
CGCTGCTGCAACCTTGCCTGGATTTGCCATTCCCAAGTGGCCAAGTGAAGCTTCGTTTTTACCTCGCCGTAACCAACACT
GACCGTCGTCAGAGGTCAGA-------AGGGCAGCACAATGCCAGAAACTAAGCAGGCCACCGTACTCCAACGAC
>chr3B_200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CCTGTTATTTCCTCTTGCTCACCGTTTCCCAAAGTTCAGT
TCAGTTGAGTTGGCAAGTAAAACCGACGCTGGTCTACCGGGGCAGTTTGCGACGCGAATACCCTCCGAGCTGGAGTAGTT
TACGATTTGAAGTCCTCTTTCTGGACTGCAAACCTTCCCCGTACGGTGAAAAAAGGAAGCTTCGCAGCAGGTTCCAAGGA
AACGGGCGCGGAGCGAACGGCAATCCCGATCAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTACC
ACCACGTGACCTGACGGCACCCCACAAAATCCACCTGCGTCGCCA-----GACGCGACGTGAAACTCCAGTCCAGC----
-----CGCGGTTGTACCTAGCAGTAGGTGCCTCGCACGGCGCGCGCAGCGCAGGCAGCAAAGAATATACTTGGCGGAGGC
GAGGATAAACCGTAAAACAGGCTGCTGGGAT---------TACCAAGTAACCTTCGAATCCGATAAGTTTTACTGCTGCT
GATAACAACCGGCTGTGGC-TTTTACTGCTGGGTA------GGCCGGGGCCGGGGCCGGAGGGTGGGGCGC-GCGGGGCA
CTGTTGGTGGTGCATGCCTCAGTGGCTCTCGCTGCTCTTGGCTTTATTTACTCCTTAAGAATCGTTCCCTACAGCTGACC
TCCCCCTCCTCCAGCTCCACGCCAATTAAACCCTACTACTACT---ACCAGCACTCCCCCTCTCG--CCCCTCGCGTTAT
CTCCGCTCCCCTCGCGCAGCCCACGTACAAAACGAAACAAAAAAGCGCCGAGTAACGCACTGCCCCGCCGCAGATAGAGA
ATTGCGGTGC----------CTACCGCTCTCGCGGCGGCCATGGAGGCGACGGTGCCCGACTACTACGGCCGCGACAAGA
AGGGCTCCGACCTCTTCGTCGTCGACGACCTCCTCGCGCTGCCGTGCGACGACGACGAGGAGGAGGAGGAAGGGGTTGGC
GAGGCGCCGTTCCTGCCGGC---------CAACTCCGCCTCCGCCGCCGCCG---------TCGTCGTCAAGCAGGAGGC
CGGGTTCGGGAACGCGTCGGCCGACTCGTCCACGGTCACGGCCCTCGACAGCTGCAGCAACTCCTTCTCCGGC---CTCG
CCGATGGCGACTTCTCCGGCGGCCTCTGCGAGCCGGTAAATTCTCCATCCATCCTTCTGTTGTACTCCTTTTG------G
CATCATCAATTGTTCG-CGGAATTCTTCTGCGCTAATTAACTGAACGACTTTACGTTTTTTCCGTCCTTATTAATATGTT
CCATTTACACGAGGGAATTCCATGGAAAATTGCATATACTACGGAT-ATTTAAGACTGATTTCACAATATATATTCCGCA
ATTAAACCACTCCAAAAATTATCCTCCACAATTACGCATGAA--------------------------------------
--------------------------------------------------------------------------------
---------TGCAGTTTTGTCTCGCACAGAGAGTAACCGAAATAGGAAACAGCTGCCACGCGTAAGTGGCACTGCACACT
ACCAAAAATAGCAGCTTTCGCGTTCAGCGCTAGCTGGACGCTTCCATATACGCACAAGAATTCGAGTGGCTTTCCAAGTT
TTTAGCTTAATAATTATAGAGTTCTCAAAACGAAGCAAACTC----ACACGCATGCATGAGCTGTTGCTAACTAAACTTG
ATGTGAATTGTGCGCAGTACGATCAGCTGGCGGAGCTGGAATGGCTGTCCAACTACATGGGCGAGGGCGAGGAGAGCTTC
GCCACCGAGGACCTACACAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGGGGCTTCCCCTCGGCGAACGGACCACCTGC
TCCGGCGGCCACCGCTGCCACGGCGCAGCCCGGCATGTTCCTGCCGGAGGGCC---------------------------
---------------CCGTCCCCGCCAAGGCCCGTAGCAAGCGCTCCCGCGTTGCGCCGGGCAACTGGTCGTCCCGCCTG
CTCGTTCTCCCGCCGGCCCCGGCCTCCCCGCCGTCCCCGGCGTCCATGGCCATCTCGCCGGCAGAGTCCGGCGTCTCAGC
CCAGGCATTCCATGT---------CAAGAAGCCCTCCAAGCCGGCAAAGAAGAAGGAGGTGCCGCCGCAGGTGCAGGCGC
AGGCTCAGGCTCAGTCGGTGAGCTCGCCCACAGCGCCGTCGGGCGTCACGGCGGCGGCCAACGACGGACGGCGGTGCCTG
CACTGCGAGACGGACAAGACGCCGCAGTGGAGGACGGGGCCCATGGGCCCCAAGACGCTGTGCAACGCGTGCGGGGTGCG
CTACAAGTCGGGCCGGCTGGTGCCGGAGTACCGCCCTGCCGCGAGCCCGACGTTCGTGACGTCGAGGCACTCCAACTCCC
ACCGCAAGGTGCTGGAGCTCCGCCGCCAGAGGGAGAT---------GCACCACTACCACCAGCCATCGCAGCTCCAGCAG
CACGCGGTCGCCGGCGGCGTCGGAAGGATAATGCACATGGAGAGCCACCTGCTGTTCGACGGGCCGGCGGCGCCGCCCAT
CCTCGGCGGTGGCGATGACTTCTTGATCCACCACCACCTAGG---GACGGACTACCGGCAGCAACTCATCTAGACGAGTC
GTCAGTCTATTAGAACTGATCAGTTTAGCCCAGGAATAATAATTAAAAGCAGCTAAAACCCCAAGAGCCGGGAATATCGG
AAGAACTGCAAATGTTTGCTTATTA---GGAGTTATATTTTCCCAGTTTTCTCTACC---CCGTTTGGTTAGCCTGTGTG
CTTTTTGTTGAGCTCGAAATTTTCGTGTCGATTTAGTTTGTGATCCTGCCCAGTTTCCCGCTTGATTAGTTCACTCCTAA
TTACCCCTCAGAAACTAATTCTAGGGAGTTGAGTCCTTTTA-TCTCTTAGCATTTTGTAATACAAA-TACTTTTCATTTC
GACTTTTGCTTCTTTTTCTGCGCCTAGCTAGAATATGAAAACAAGCTTTTTGGCCAATTGTTCGATCGAGATAACTCCCG
TTCATGCAATCTC---------TAGATAGCTTTGGCATGGTATGAGTATGATGC---GCAAGGATGAATCTCATGGCTCC
TCCCTCCGCTCTGGCATGCAATTGCAGTTGCAGCAGCCATGCGTGCACTCATGTCACAGATGTTGTGTGCGCAACCGAAC
ATGCAAAGTTACCTCAAGGAGGAGGCGGCGAGAGTGCCATTGCCCACCCACCATCACTCCATCAGTCCGTCCGTCGGAAC
TCACTCACACGTGATCATTAG--TAGAATCTCGCGTGAAAAAAAGATGCCATCTCACTCGTTGGATCCAATCAGAGCGTC
CTCCTTTGGTCCTGGCCTGTAGGTGTTGCCTGGTGGTGGTGGTGGTGTTGGGGGTAACTAGGGTTCATCATTGCGCTGCT
GCAGGCTGCACCTAGCGCGGGGTACCACCTCTCCGTGGAGAGGGTTTCCGGATAAGTAGGGTCATTCACAGC----CCCT
CGC--------------CTGGATTTGCCACTCCCAAGTGGCCAAGTGAAGCTTCGTT-TTACCTCGCCGTAACCAACACT
GACCGTCGTCAGAGGTCAGA-------AGGGCAGCACAATGCCAGAAACTAAGCAGGCCACCGTACTCCAACGAC
>chr1A_1048
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-------CGACGTGTTCCTCGTCGACGACCTCCTCGACCTGCCCTGCGACGACGACGAGGAGGAGGACGACGCCGCGGCG
GCGGGGTTCGCCGACGGGGCCGCGGACTGCAGCGCCGGCGAGGCCGGCGCCG---------TCGACG-------------
-----TCGGGAACGCGTCGGCCGACTCGTCCACGGTCACAGCCGTCGACAGCTGCAGCAACTCCCTCTCCGGCGGCCTCG
CCGACGGCGACTTCTCCGGCGGCCTCTGCGAGCCGGTAATCATTAATTCCT--CTCCTTTTACCCTCCCGTCT------C
CATTATTAATTCACGCG--------TTGTTCCTTCCTTCGCTGCACGGATTTATGTATCAAATTTTGGCGAACAAACGAA
TTATTCACGGTCAATGCGTTCGTCTCCCTCCCCCCATTAACACTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCGCCCCATGAATGAA
GGCAGCTTTTGGAGTGACGTCTCCCGTAAATAGTAACCGATGAAACCCGCGGCCGG------------------------
-----AAATAGCAACCTCCTAAACGCTCCCC------------CCTTCTCCGGACACGGAAACGAATGATCGACCAATTT
ATTATCATTTCCGAGTTAATTCCGCGGCGCCCGTTTCGTCGCCATTGCTGAAAATCGTGTGCTGTGTGTGTCTGTGGATT
T------------GCAGTACGACCAGTTGGCGGAGCTGGAATGGCTGTCCAACTACATGGGCGACGACAA------CTTC
CCCACCGAGGACCTCCGCAAGCTGCAGCTCATCTCCGGCATCCCCTCGGCCTCGTCCCAGACGGCCCCGCGC--------
----GCGCCCGCCGCCGCGCCGGTGCAGCCCTGTGGCGGTGGTGGCGCCGTCGGTACGGCCTTGTGGCGCTCGGAGGCGC
ACGCCGGGCAGGTGTCCGTGCCGGGCAAGGCGCGCAGCAAGCGGTCCCGCGTCGCGCCCTGCAACTGGTCCTCCCGCCTG
CTCGTGCTCCCGCCGGCGCCGGCCTCGCCGCCCTCCCCGGCGTCGGCCGTCATCTCGCCGTCCGAGTCCGGGAC------
---GGCGTTCCCGCTCTTCCCGAACAAGAAGCCCGCCAAGTCGTCCAAGAAGAAGGAGGCGCCGGCCGCGCCCGCCATGA
CCGCCGCCGA---------------------------------------GGCCGCGGCCGCGGAGGGGCGGCGGTGCCTG
CACTGCGAGACCGACAAGACGCCGCAGTGGAGGACGGGGCCGCTGGGCCCCAAGACGCTGTGCAACGCGTGCGGGGTGCG
GTACAAGTCGGGGCGGCTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACGTTTGTGCCGTCCAAGCACTCCAACTCGC
ACCGCAAGGTGGTGGAGCTGCGGCGCCAGAAGGACGCCCCGCCCCAGCAGCTGCTGCACCAGCCGCAGCAGCAGCAGCTG
GGGCCGGGCCTGGGGTTCCACGTGCC---------------GAGCCCGCTGCTGTTCGACGGGCCGGCGGCGCCGCACCT
TGGCGGCGGCGCGGACGAGTTCCTCATCCGCAACCGCATAGGGCC------CGACCACCGGCAGCTCATCTAG-------
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---------------------------------------------------------------------------
>SNPs
SSSSSSSSSS--S------------------S---S-----------S------------------------------S-
---------S---S----------------SS------------------------------------------------
----------SS-----------S--------------S-----S--S--------------------------------
-S----------------------------------S--------------------S--------------------S-
--------------------------S-----------------------------------------------------
-----------------------------------SSS-SSS--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
S---------------------------------------------------------------------------S---
------------------------S-S-------------------S--------------------S----------S-
-----------------------------SSSSSSSSSSS-----------S--S---S------------------SSS
SSS--S-SSS-------------------------SSSSSS--S------------------------------------
--------------------S-----------------------------------------------------------
----------------------------------------S------------------------SS-------------
-------------------------------------------------------------------------SSSSSS-
SS-SSSS-SSSSSSSSSSSS------------------------------------------------S-----------
--------------------------------------------------------------------------------
--S---------------------------------------------S---SSSSSSSSS-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------S--S---------------------SS------------------------S---S---S------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
---------------------------------------------S----------------------------------
-----------------S---------------------S-S-SSS----------------------------------
--------------------------------------------------------------------------------
-----S-----------------------------S--------------------------------------------
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--------S----------------------------S------------------------------------------
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-------------S------------------------------------------------------------------
-----------------------------------------------------------S--------------------
----------------------------------------------S-S-------------------------------
--------S------------------------S----------------------------------------------
------------------------------------------------------SSSSSS--------------S-----
-----------------------------S--------------------------------------------------
--------------------------S------------------------------------------------S----
--S-----------------------------------------S-----------------S-----------------
---------SSSSSS-------S-------------------------------------------------------S-
--------------------------------------------------------------------------------
S-------------S-S---------------------------------------------------------------
-----------S---S-----SS----S---------------------------S------------------------
-----------------------S--------------------S-----------------------------------
----------------S-------------S-----------------S-------S--S----------SSSSSS----
--------------S----------------S----------SS-------S----------------------------
---S-S--------------SSSSSSS------------------------------------------------
>forward_1070
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----------CGTAAAACAGGTTGCTGGGC--------------------------------------------------
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>reverse_1994
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-------------------------------------------------------------------------GTCCGCA
ATTAAACCGCTCC-------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>forward_1072
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TAAAACAGGTTGCTGGGCCT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_2486
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GGAGGACCTACACAAGCTGC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>forward_1454
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GCCGCA
GATAGAATCGTTGC------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_3495
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CTGCTTCCGTTTGGTTAGCC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
