>input_sequence_45871
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-------ATGAGGCCACGGCCGCCGGCTA---TCGTGATCAG---CCTCCTCCTCCTCCTACTAC---TCGCGGTGCCGA
GGCATGGCGCCGCGGCCGGATGGGGCGACGGCGGCATGGTGCGGACGGACGGCACGCGCTTCGTGGCGGGGGACGGCGAC
CGGACGGTCTACCTCAGCGGGTTCAACGCGTACTGGCTCATGGAGATGGCGTCCGACCCGTCGCGGAGGGGCGGGGTGGT
GTCGGCGTTCCGGCAGGCGGCGGCGCACGGCCTCAACCTCGCGCGCACCTGGGCCTTCAGCGACGGCGGGCGGTCCCCGC
TGCAGTCCTCGCCGGGCGTCTACCACGAGGACATGTTCCAGGTAAGGCCGGTGACCTCCGTCGACCAGCCTTG--CTCGA
TGCCGACGTTACGT----------GCCGACAAAGAAAGCTAGCTTAGCTTGCTCAGTGCAGAATGACAGCTTGTGTGGTT
TGGTTTTGGCATGCAGGGTCTGGACTTCGTCATCGCCGAGGCGAGGCGGCACGGGATATACCTCCTCCTCTGCCTCACCA
ACAACTTCGACGACTTCGGCGGCAAGCGGCAGTACGTACAGTGGGCGAGGGAGGACGTCGCCGCCGGCGCCGCCGCCCAC
AACCTCACCTCCGCCGACGACTTCTTCAACAACACCCTCATCAAGTCCTACTACAAGAACCACGTCAAGGTAATCATCAA
TTCATTCATCGCCACACGTGCCATATACATACGT----GTCAATGACTACGTTGTCACGTTCATGATCTAAACCCAAA--
--TGATATGATGTCTCTCTTCCTC-TACGTGTGATGCAGACGGTGCTGACGAGGGTGAACACGGTGACCGGCGTGGCGTA
CAGGGACGACCCGGCCATCTTCGGGTGGGAGCTGATGAACGAGCCCCGGTGCGGCGCCGAGCCCACGGGCGCCCTGGTGC
AGGCGTGGGTGGAGGAGATGGCGCCGTACCTGAAGACCATCGACGCAGCCCACCTGGTCACGGCGGGGCTGGAGGGCTTC
TACGGCGACGGCGCGCACGAGAGCAAGGACCTCAACCCGTGGGGCATCTACTACGGCACCAACTTCGTGGCCACGCACCA
GGCCGCCGGGATCGACTTCGCCACCATCCACCTCTACCCGGACGTCTGGCTCTGGGGCTCCACCGCCGACCAGCAGGCGC
GCTTCTTCCGCAACTGGACGGCGTCCCACGTCCGCGACACCGAGCGCCACCTCCGCAAGCCGCTCCTCGTCACCGAGTAC
GGTAAGTTCCTCTGGGAGGAGGGCGGCGAGAACGCCACGTCCGCCACGCAGAGGAGGGATGGGTTTCTCGGCATGGTGCT
CGACGCCATCTACGAGTCGGCGTCGCGGGGCGGGCCGCTCGTCGGCGGCGCCTTCTGGCAGCTGCTACTCGACGGCGACG
GCATGGACGCGCTCAAGGACGGGTACCAGATTGTGCTCCCCGAGGACGCCCGCGCCGCCAGCATCATCAGCGATCACTCC
GAGAAGATGGCCGAGC----------------------------------------------------------------
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----------------------------------------------------------------TCAGCAAGCAGGACGC
CGCGGAGGCCGGTCGCCGGTGGAGTAGGAAGATCGGCAGTTTTGTCAGCTGGGATGGTACTCATCCTTACGTCCAAAAAT
TCTTGATTCGTTTCGTCTCTCTGTTCAGATCAGTTTCTTCACTGTTTGGTCCCAT------TGTAGCTACCTAG------
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------
>chr5B_1_TraesCS5B01G504000
AAAAACAAACTTTTAGCATGCGAAGCTCTTTTTAAGCGCCTGTTGAAGATGCTCTAAGGTAGCTATCCTTCTCGAGAAGG
AAAGCCCCTAACACCAGCATGCAAAACATCAGATAATTAAACCTGTATGTCGTCGAATGCTTGAGACTCCTGGACTCCTG
GTCACTCGCTGTACTCTGTAGCGTAGCTCTAATGCGCAGGCCACGCGCCGACGCCCGTACGTTGTTGACGTCGAGTCGAC
AGCCGACACCGCCGCGCGCCGCCGGCCTCTGCCGTCGTGGCTCATCTCCCACGCGCCGCCTAGATCGTTGCCGACGTAAA
CGCATACGCGCGGTATACGTACGTACGTCTCTGCTCTTCTGCTCGCTTTACGTCGACAATTTTTACAGTTACGTGACGGT
AGTAGCTACCCTGTTCGTTCGGCACGGAATCTTGACCGTTGATCCAGGCCGGCCGGCCGACCACGGACCAGGTGCCGATT
TTATAACGTGACGGGACTCCCTAGCTAAGCTAGCCACCAAGAGAGCCGCCGGCTCGTTGCGGTGGAGCGCAGCGTTTGGA
A-----ATCCAACTTCCCCTTCTCTGGGAGGTGGGGCCCACGGCCGCTACGCCTACC--GCCTACACGTCAAATGGCAGA
CGCTCCAGCTCGGCCGCCGGCGTCAGCGTGTCTCTAACACGAAGCTCGATTCGAAGACAACAATGGCCTGATTACA----
CTCAACACAAAGCTATTCAAACACAGCAGTCGCTCTCGTGGATCGA--------TCGACGTGTTTGTCCACGTACGTAGA
GAGTGATGAGGTGCCGATCGGCGTGTTCCAGGCGTGAGCT------CTGCTAGCTCTGCCGTATATTACTACGCGCGCGC
GCGC--CGGCCGAGCAGCGGCAGCACCAATTAAGTTCGCGCCAAATTAGGCAAGCTAGCGAGCACTGCACGTACGCGTGG
GCGCGCTCTGTCTGCTGCCAAAA-GGCGTGCAAACCAAAGCTTGATTAG-TAGCGCGCGGAGG-----------------
-CCGGCGATGAGGCCACGGCCGCCGGCTA---TCGTGATCAG---CCTCCTCCTCCTCCTACTAC---TCGCGGTGCCGA
GGCATGGCGCCGCGGCCGGATGGGGCGACGGCGGCATGGTGCGGACGGACGGCACGCGCTTCGTGGCGGGGGACGGCGAC
CGGACGGTCTACCTCAGCGGGTTCAACGCGTACTGGCTCATGGAGATGGCGTCCGACCCGTCGCGGAGGGGCGGGGTGGT
GTCGGCGTTCCGGCAGGCGGCGGCGCACGGCCTCAACCTCGCGCGCACCTGGGCCTTCAGCGACGGCGGGCGGTCCCCGC
TGCAGTCCTCGCCGGGCGTCTACCACGAGGACATGTTCCAGGTAAGGCCGGTGACCTCCGTCGACCAGCCTTG--CTCGA
TGCCGACGTTACGT----------GCCGACAAAGAAAGCTAGCTTAGCTTGCTCAGTGCAGAATGACAGCTTGTGTGGTT
TGGTTTTGGCATGCAGGGTCTGGACTTCGTCATCGCCGAGGCGAGGCGGCACGGGATATACCTCCTCCTCTGCCTCACCA
ACAACTTCGACGACTTCGGCGGCAAGCGGCAGTACGTACAGTGGGCGAGGGAGGACGTCGCCGCCGGCGCCGCCGCCCAC
AACCTCACCTCCGCCGACGACTTCTTCAACAACACCCTCATCAAGTCCTACTACAAGAACCACGTCAAGGTAATCATCAA
TTCATTCATCGCCACACGTGCCATATACATACGT----GTCAATGACTACGTTGTCACGTTCATGATCTAAACCCAAA--
--TGATATGATGTCTCTCTTCCTC-TACGTGTGATGCAGACGGTGCTGACGAGGGTGAACACGGTGACCGGCGTGGCGTA
CAGGGACGACCCGGCCATCTTCGGGTGGGAGCTGATGAACGAGCCCCGGTGCGGCGCCGAGCCCACGGGCGCCCTGGTGC
AGGCGTGGGTGGAGGAGATGGCGCCGTACCTGAAGACCATCGACGCAGCCCACCTGGTCACGGCGGGGCTGGAGGGCTTC
TACGGCGACGGCGCGCACGAGAGCAAGGACCTCAACCCGTGGGGCATCTACTACGGCACCAACTTCGTGGCCACGCACCA
GGCCGCCGGGATCGACTTCGCCACCATCCACCTCTACCCGGACGTCTGGCTCTGGGGCTCCACCGCCGACCAGCAGGCGC
GCTTCTTCCGCAACTGGACGGCGTCCCACGTCCGCGACACCGAGCGCCACCTCCGCAAGCCGCTCCTCGTCACCGAGTAC
GGTAAGTTCCTCTGGGAGGAGGGCGGCGAGAACGCCACGTCCGCCACGCAGAGGAGGGATGGGTTTCTCGGCATGGTGCT
CGACGCCATCTACGAGTCGGCGTCGCGGGGCGGGCCGCTCGTCGGCGGCGCCTTCTGGCAGCTGCTACTCGACGGCGACG
GCATGGACGCGCTCAAGGACGGGTACCAGATTGTGCTCCCCGAGGACGCCCGCGCCGCCAGCATCATCAGCGATCACTCC
GAGAAGATGGCCGAGC----------------------------------------------------------------
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----------------------------------------------------------------TCAGCAAGCAGGACGC
CGCGGAGGCCGGTCGCCGGTGGAGTAGGAAGATCGGCAGTTTTGTCAGCTGGGATGGTACTCATCCTTACGTCCAAAAAT
TCTTGATTCGTTTCGTCTCTCTGTTCAGATCAGTTTCTTCACTGTTTGGTCCCAT------TGTAGCTACCTAGGCTGGA
C--TG----TAGTAGAGAAATGTTCAGATACCTCCCACTGAGTGTAGCAATTTTGAC-TTGTTCGACGGTGCTGTCTGAG
---------AAGTTTTAATTAGCTGACTCGAGAGTTGTAAATGGAAAGT------------AGAACTCGGCGTGAGTGAT
CCGAGTA-------------------------------------------------------------------------
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--------------------------------------------------------------CACAATTTCCTTGCACAA
GGATCGAACATCCTATACATAGGCCATACTGTTTGGCTCAAACCCGAGCAGGGCCATCTCTGAATTTCAATCGGCTAGT-
---TTTGTGAGGTGACCACCAACTTTCTTCACTTGTCCGACGCAACCAAATGTGTGCAAGTGCTCAACACTTGGTTTCAC
CTTGTACATCGCCTCATAGGGTGCGATACCACGAACACCCTTAATTCGTCGGTGCACGATTCAGGAGGTAAACTGCAGTG
AACACTGCTTCA-----CCCAAAACAGTCGAGGCAGCCCCTTGCTCTTCACTAGACCACCTGCCATGCCAACCACAGTCT
GATTTA------------AGTAGAGCATGAAAGGTTATGTGTCC-------AAACGAGCATGCCATAACCACACTGGTT-
--------------------CAGACTGTTCAATGTTCAGTATGTACAGTGTGTTCGATGCCCTTCTTACTTTCGCCACCA
CCTTGTGCTCTTTTACTCTTTGTCCAATATCGTTATCAGCCCTTCGTCCACTGAGTACTTGCAGATAAATTCATCTAGTT
GCCCCAAACTGATGATATTGCTACTCAACTTCGGAATGAAGTAAACATCTGTCGGAAGCCGGTGGTCTCCATTGTGCGCG
ACAAAGAGTACTGAGCCACGCCCCTCAATGCCCACCACTGAACCATCACCAGAGGGAGCTGAACCAGTGATTCTTCAGTC
CAACTCGACAAACTTCTCAACATCCCTGGTCATATGGTTGCTCACAGCTCTGTCCAAGTACCAAGACTTGTTTGCTAAAC
TTGACAGCTTGGGCACGACCTTCTCTTCGTGAACAACTTTTCTGAAAAAAGTGAATAATGATTCAAAATTGTGAAAAATT
TGAATT
>chr5D_384
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---------------------------------------------------------------TACAGTTACGTGATGGG
AGTATCTACCCAGTTTGTTCGGCGCGGAATCTTGACCGTTCATCCAGGCCGGCC----GACCACGGACCAGGTGCCGATT
TTATAACGTGACGGGACTGGCTAGCT-AGCTAGCCACCAAGAGAGCCGCCGGCTCCTTGTGGTGGAGCGCAGCGTTTGGA
A-----ATCCAAGTTCCCTTTCTCTGGGAGGTGGGCCC-ACAGCCGCTACGCCTGCCCTGCCTACACGTCAAATGGCAAG
CGCTCCAGCTCGGCCGCCGGCGTCAGCGTGTCTCTAACACGAAGCTCAATTCGAAGACAACAATGGCCTGATTACA----
CCGAGCACAAAGCTATTCAAACACAGCAGTCGCTTTCGTGGATCGA--------TCGACGTGTTTGTCCACGTA----GA
GAGTGATGAGGTGCCGATCGCCGTGTTCCAGGCGTGAGCTCTCCTACTGCTAGCTCTGCCGTATATTACTACGCGCGCGC
GCGCGCCGGCCGAGCAGCAGCACCACCAATTAAGTTCGCGCCAAATTAGGCAAGCTAGCGCGCACTGCACGTACGCGTGG
GCGCGCTCTGTCTGCTGCCAAAA-GGCGTGCAAACCAAAGCTTGATTAGTA-----GCGGAGG-----------------
-CCGGCGATGAGGCCACGGCCGCCGGCTC---TCGTGAGCAGCCTCCTCCTCCTCCTCCTACTAT---TCGCGGTGCCGA
GGCATGCCGCCGCGGCGGGAGGGGACGGCGGTGGCATGGTGCGGGTGGACGGCACGCGGTTCGTGGCGGGGGACGGCGAC
CGGACGGTGTACCTCAGCGGGTTCAACGCCTACTGGCTCATGGAGATGGCCTCCGACCCGTCCCGGCGGGGCGGGGTGGT
GTCGGCGTTCCGGCAGGCGGCCGCGCACGGCCTCAACCTCGCGCGCACCTGGGCCTTCAGCGACGGCGGCGACCGACCGC
TGCAGTCCTCGCCGGGCGTCTACCACGAGGACATGTTCCAGGTAAG--------------------------G--CTCGA
TGCCGACGTTACGT----------GGTGCAAGGC----------TAGCTTGCGCGGTGCAAAATGACAGCTTGTCTGGTT
TGGTTTTCTCATGCAGGGCCTGGACTTCGTCATCGCCGAGGCGAGGCGGCACGGGATATACCTCCTCCTCTGCCTCACCA
ACAACTTCGACGACTTCGGCGGCAAGCGCCAGTACGTCCAGTGGGCGAGGGAGGACGTCGCCGCCGGCGCCGCCGCCCAC
AACCTCACCTCCGCCGACGACTTCTTCAACTCCACCCTCGTCAAGTCCTACTACAAGAACCACGTCAAGGTAATCATCAA
TTCATTCA---CCACACGTGCTATATAAATACGT----GTCAGTGAGCACGTTGTCACGTTGATGATCTAAAACCAAA--
--TAT--TGATGTCTCTTCTATACGTACGTGTGACACAGACGGTGCTGACGAGGGTGAACACGGTGACCGGCGTGGCGTA
CAAGGACGACCCGGCCATCTTCGGGTGGGAGCTGATGAACGAGCCGCGGTGCGGCGCCGAGCCCACGGGCGCCCTGGTGC
AGGCGTGGGTGGAGGAGATGGCGCCGTACCTGAAGACCATCGACGCCGCCCACCTGGTCACGGCGGGGCTGGAGGGCTTC
TACGGCGACGGCGCGCACGAGAGCAAGGAGCTCAACCCGTGGGGCATCTACTACGGCACCAACTTCGTGGCCACGCACCA
GGCCGCCGGGATCGACTTCGCCACCATCCACCTCTACCCGGACGTCTGGCTCTGGGGCTCCACCGCCGACCAGCAGGCGC
GCTTCTTCCGCAACTGGACGGCGTCGCATGTCAGTGACACCGAGCGCCACCTCCGCAAGCCGCTCCTCGTCACCGAGTAC
GGCAAGTTCCTCTGGGAGGAGGGCGGCGAGAACGCCACGTCCGCCACGCAGAGGAGGGACCGCTTTCTCGGCATGGTGCT
CGACGCCATCTACGAGTCGGCGTCGCGGGGCGGGCCGCTCGTCGGTGGGGCGTTCTGGCAGCTGCTCCTCGACGGCGACG
GCATGGACGCGCTCAAGGACGGGTACCAGATAGTGCTCCCCGAGGACGCCCGCGCCGCCACCATCATCAGCGATCACTCC
GAGAAGATGGCCGAGC----------------------------------------------------------------
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----------------------------------------------------------------TCAGCAAGCAGGTCGC
GGCGGAGGCCGGTCGCCGGTGGAGTAGGAAGATCGGCAGTTTTGTCAGCTGGGATGGTACTCATCCTTACGTCCAAAGAT
TCTTGATTCGTTTCGTCTCTCTGTTCAGATCAGTTTCTTCACTGTTTGGTCCTACGATACATGTAGCTAGCTAGGCTCTA
CTGTACTACTAGTAGAGAAGTGTTCAGATACCTTCCCCTGAGTGTAGCGATTTTGAC-TTTTTCCACGGTGCCGTCTGAG
ATTCTTCAAAAGTTTTAATTAGCTGACTCAAGAGTTGTAATGGAACGTAGA-----------------------------
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------
>chr4A_474
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-------------------------------------------------------------------------GCCGATT
TTATCACGTGACGGGACCGGCTAGCC-AGGCACCACAAGCTCTGGT----GGCTCGTTGTGGTGGAGCGGAGCGTTTGGA
AAACAGATCCAAGTTCCCCTTCTCTGGGAGGTGGGCCCCACGGCCGCTACGCCTGCCTTGCCTACACGTCAAATGGCAAG
CGCTCCAGTTCGGCCGCCGGCGTCAGCGTGTCTCTAACACCAAGCTCAATTCGAAGACAACAATGGCCTGAGTACATACA
CCGAGCACAATGCTATTCAAACACAGCAGTCGCTTTCGTGGGATGATCCGCGCGTCGACGTGTTTGTCCACGTA----GA
AAGTGATGAGGTGCCT----GCGTGTTCCAGGCCTGAGCTCTGCCTCGCACCGGCCGTGCTC-TATTACTACGCCTGCCG
GCC-----------------CAGCACCGGTTAAGTTGGCGCCAAATTAGGCAAGCTAGCTCGCACTGCACGTACGCGTCA
GCGCGCTCTGTCTGCTGCCAAAGGGGCGTGCACACCAAAGCTCCATTAGCTAGCGCGCGGCGGCTGCGGCCATACGTACG
TCCGGCGATGAGGCCACGGCCGCCGGCTGATCTCGTGGTCGG---CCTTTTCCTCCTGGCTGTCCTCGTCGTCGTGCCGT
GGCATGCCGCCGCGGCCGGAGGGGACGGCGGCGGCATGGTGCGGACGGACGGCACGCGCTTCGTGGCGGGGGACGGCGAC
CGGACGGTGTACCTCAGCGGGTTCAACGCCTACTGGCTCATGGAGATGGCGTCCGACCCGTCGCGGCGGGGCGGGGTGGT
GTCGGCGTTCCGGCAGGCGGCGGCGCACGGCCTCAACCTCGCGCGCACCTGGGCATTCAGCGACGGCGGCGACCGCCCGC
TGCAGTCCTCGCCGAGCGTCTACCACGAGGATATGTTCCAGGTAAGCTAGGCCACCGTTCAATCCGTCTGTCGGCCTCGA
TGCCGACGTTAGGTGCCGACAGGTGGTGCGAGGC----------TAGCTTGCTCGGTGCAAAATGACAGCTTGTGTGTGG
GC-TTTTCGCATGCAGGGTCTGGACTTCGTCGTCGCCGAGGCGAGGCGGCATGGGATATACCTCCTCCTCTGTCTTACCA
ACAACTTCGACGACTTCGGCGGCAAGCGCCAGTACGTCCAGTGGGCGAGGGAGGACGTCGCCGCCGGCGCCGGCGCTCAC
AACCTCACCTCCGCCGACGACTTCTTCGACAACACCCTCGTCAAGTCCTACTACAAGAACCACGTCAAGGTAATCACCAG
TTCATTCATCACCACACGTGCCATATAAGTACGTACGTGTCAGTTAGCACGTTGTCACGTCGGTGATCTAAATCCAAATA
AGTAT--TGATGTCTCTTCTCTACGTACGTGTGACACAGACGGTGCTGACGAGGGTGAACACGGTGAGCGGCGTGGCGTA
CCGGGACGACCCGGCCATCTTCGGGTGGGAGCTGATGAACGAGCCCCGGTGCGGCGCCGACCCCACGGGCGCCATGGTGC
AGGCGTGGGTGGAGGAGATGGCGCCGTACCTCAAGGCCATCGACGCCGCCCACCTGGTCACGGCGGGGCTGGAGGGCTTC
TACGGCGACGGCGCGCACGAGAGCAAGGAGCTCAACCCGTGGGGCATCTACTACGGCACCAACTTCGTGGCCACGCACCA
GGCCGCCGGGATCGACTTCGCCACCATCCACCTCTACCCGGACGTCTGGCTCTGGGGCTCCACCGCCGACCAGCAGGCGC
GCTTCTTCCGCAACTGGACGGCGTCGCATGTCAGTGACACCCACCGCCACCTCCGCAAGCCGCTCCTCGTCACCGAGTAC
GGCAAGTTCCTCTGGGAGGAGGGCGGCGAGAACGCCACGTCCGCCACGCAGAGGAGGGACCGCTTCCTCGGCACGGTGCT
CGACGCCATCTACGAGTCGGCGTCCCGGGGCGGGCCGCTCGTCGGCGGCGCCTTCTGGCAGCTGCTGCTCGACGGGGACG
GCATGGACGCGCTCAAGGACGGGTACCAGATCGTGCTCCCCGAGGACGCCCGCGCAGCCAGCATCATCAGCGATCACTCC
GAGAAGATGGCCGAGC----------------------------------------------------------------
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----------------------------------------------------------------TCAGCGAGCAGGACGC
GGCGGAGTCCGGTCGTCGAACGACGAGGAAGATCGGCAGTTTTGTCAGCTGGGATGGTACTCATCCTTACGTCCAAAGAT
TCTTGATTCGTTTCGTCTCTCTGCTCAGATCCGTTTCTTCACTGTTTGGTCCCATGTAGCTA--AGCTAGCTAGGCTGGA
CTGTG----TAGTAGAGAAATGTTCAGATACCTCCC-CTGAGTGTAGCAATTTTGACTTTTTTCCACGGTGCCGTCTGAG
ACTTTCCAAAAGTTTTAATTAGCTGACTCAAGAGTTGTAAATGGAAAGTACTACCTAGAAGAGAACTCGGCGTGAGTGAT
CTGAGTAGTACATATGAAGATGGGCAATCAGAGTATATTGCAATTTCTTGTTTATGCATATATGTGCCACCGGGATCTTT
CTTCAGTTTGTAAAATCCATTTCAAACGAATTGCTTTGTGTCCCTTTGGCATATCAGTGATCTCCCAAGTTTCATTACTC
TTAAACAAGCTGATGTCTGTCCATATCTTCTCTCCATGGCACTTCTTTACCTGCCACTTCAACAGATGTGGGTTCCTCTG
CTCTACTTCGCCCGACGCTCATTCTCAGCGTCTATCTTCTTCCAACACAACATCTCGAGACACACAATTTCTTTGCACAA
GGATCCAACATCCTATAGGCCT----TACTGTCTGGCTCATACCCGATCAGTGCCATCTCTGAACTTTGGTCGGCTAGTT
TTGTTTGTGAGGTGACCACCAACTTCCTTCATGTGTCCGATGCAGCCAAACGTGTGCAAGTGCTCAA-------------
--------------------------------------------TTCGTCGGTGCACGATTCAACAGATAAACTGCAGTG
GACACTACTGACTTCACCCCAAAACTGTCCAGGCTGACCCTTGCTCTTTAGTAGACTTTTTGCCATGTCAACCATAGTCG
GATTCCATGATTTCCTTCAGTAGAGCATGAAAGCTTTTGTGTGCAACTGCAAAACGAGCATGCCATAACCAAAGGAGTTT
CTGAAACTTTCGACAGTGGGCAGACTGTTCAATGTTCAGTATGTACAGTCTGTCA-ATGCCCTTCTTACTTTCGCCAGCA
CCTTGCGCTCTTT--------GTCCAGTACTGTCATCAGCCCCTCGTCCACTGAGTACTTGCAGATAAATTCATCTAGTT
GCCCCAAACTGATGATATTGCTACTCAACTTCGGAATGAAGTAAACATCTGTCGGAAGCCAGTGCTCTTCATTGTGGGCG
ACAAAGAGGACTGAGCCACGCCCCTCAATGCCCACCACTGAACCATTT---------------CCAGTGATTCTTCAGTC
CAGTTCGAAAAACTTCTCAACATCCCTGGTCATATGCTTGCTCACATCTCTGTCCAAGTACCATGGCTTGTTTGCCAAAC
TTGACAGCTTGGCCACGACCTT----------------------------------------------------------
------
>chr5D_2379
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-------------------------------------------------------TGGCATCTGCTCCTCGACGGCGACG
ACATGGACGCGCTCAAGGACGGGTACCAGATAGTGCTCCCCGAGGACGCCCGCGCCGCCAGCATCATGAGCGATCACTCC
CGGAAGATGGCCCAGCTCAGAGCATCTCCAGCCGTTGCCTCCCTCAGGACGCATAAAAATGGCTCCCTGAGGGCGAGCCG
GCGCTAAATCCGCGCTGGAGGCGGTTTTGTGCCCAGCCGTCGCCCCCGGCGCTGAAATTGGCCCATTTTTTGGCCCACTT
TTGACGAATAAAGGGCCCATATAGGCGAGAATAGGCCCATATTCGGCGTGGTTCGCCGTGGCTCGGCTTTGAATTATGAA
CATTTAAATATTTTTATCACATATTTCATCACAGAAAAATCAAATACTTCAACAAAATAGTACAACAACAAATAGTTGAA
TACAAATTATATAGTTCAACAAATAAAAATTCATATTTTATCACACGTCGCGCCCGGCATCGCCATGAGATGTTCTTCTT
CCTGGACGTCGGCCTCGGCTTCCTCCTCCAGCAGCCCGGCGAGCGCTTCCTCGTCATCCGAGTCCATCGCCGAGGCAGGC
AAATCGACGACCACCTTGCGCCCCGTGGGCGTGTACCCGCCGCTAAACTGCCCCTCCGCGGCTGGAAACGCCCAGCTGTT
GTTGGAGCGACTGCCATGGCGAACCTCTGCTATTTTTCCAGCGGGGAATGGCTATCTAGCGGTGAAGGGCGGCGGGCGGC
GACGGGATATAGCTAGTGGCGGCCGAGGGCGCGGGGGGCGGGAGGCGAGTCGGGGAAGAAAATCTTGACTTTTCACCTGA
CGGTGTTGGCCAGCAGCGCTTTTCCCTTGCGCCGGAGCCCCCAATGCCCCCCCAGTGCGTCGGGTTCGGCCTGTGACCGC
CGGGCGGAAAAAGGGCCGAACCGGCGCTTTTCGGCGTCCTAGGGGCGCGACTAGGGCGTTTTTTTGGTGCTGGCTCCGAA
AAAGTGGCCTGGGGGGGCCTGTTGGCACTAGTAGAAAAAGGGTTTTTTTCCCGGTTTATAAGGGCCTTTAGTCCCGGTTC
TGGAACCAGGACTAAAGGGTCGTTACTAAAGCCTCCCCCTTTAGTCCCGGTTCTTACACGAACCGGGACTAAAGGCCGTC
CACGTGGCCGCAGCCTGGAGCTCCACCTTTAGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGAAATTTTATGATTTTT
TTATGATTTTTTTGAATTTTTTTTATTTTCAAATTTCTGAATTATTTTAATCTCTAATCTCTAATCTATAATCACCACCC
CTCATCACTGCTCAATTTAACCTCTAATCTCTAATCACCCCTCATCATTCCAAATCATCTAACTTCCCGGACGGTCACCC
ATCCTCTCACTACTCCAGCCTGAGCACGCTTAACTTACGGGTTCTATTCTCCCTCGTTTCCAAGTCTGCACTTGTTGTTT
TCCTAACAATAGTAAGATAACAATCCTATTAACCCTCAGGAATTTAGCTTGAGCATGAAGTCACACATTTCACTGTTTGA
GTTTGAAACTATTGTTTTAAAAAACAATAATTATTTAGTAACACTAGTATTTCTTGAATAAGTAGTTTGACCATAGTTTG
ACCACAGTTTGACCAGATTTGACCAAAATTAAAAAAACTGAAATAATTATTTAGTAACACTAATATTTCTTGAATAATTA
GTTTGACCATTGTTTGACCACAGTTTGACCAGATTTGACCAAAATTCAAAAAAACTGAAATAATTATTTAGTAACACTAA
TATTTCTTGAATAAGTAGTTTGATCACAGTTTGACCAGATTTGACCAAAATTCAAAAAAACTGAAATAATTATTTAGTAA
CACTAATATTCTTGAATAATTAGTTTGACCATTGTTTGACCACATTTTGATCAGATTTGACCAAAATTCAAAAAAATTAA
AATAATTATTTAGTAACATTAATATTCTTGAATAATTATTTAGTAACAGTAATACTTCTTGAATAAGTAGTTTGACCATA
GTTTGACCAGATTTAACAAAAAATCAAAGAAAAAACTGAAATTTGAGCATAACTTTTTTCCTTTTAGAATTTGAGGATTC
TAAAAATTTGCAAACAGGCCGTAGGCGGTCAAAATCGGATGCGGATTTTCGTGCTGAACATTTTGATATATTATACTTTT
TTTCTGACATCGTATGCAAAAGTTATAGCCGTTTTACATTTTCCCTACACTTTTTGCAAAACATGTCCAAATGTAAGTTT
TCCTAACTAGTACATATAGTAACAGAACTACATCTGGAAGGATTTTAATTTTTAATGTTTTTATCATTTTCTTTTGCTTT
TTACAAAACTGAAAAGACGATCCACCGGGGGGGGTAGAGTTTGAAAATGGGACCTTTAGTACCGGTTCGTGCCATGAACC
GGTACTAATGCCTCAAACCCCATTAATACCGGTTGGTGGCTCGAACCAGGACGAAAGGTCTAACCTTTAGTAGCGGATGG
TGCCACGAACCGGTACTAATAGGCATCGCACCCTTTAGTCCCGGTTCGTGTCTCAAACCGGGACTAAAGGGCTCAGGTGA
ACCGGGACTAATGCCTTAGCCACACGAACCGGGACCAATGCTCACATTAGTTCCGGTTCGTGACTGAACCGGGACTAATG
TGAATATTGCCCTATGACCAAAGCCTTGTTTTCTATTAGTGTGGGGACGCGGCTGGAGATGCTCTCAGCAAGCAGGTCGC
GGCTGAGGCCGGTTGCCGGTGGAATAGGAAGATCGGCAGTTTTGTCAGCTGGGATGGTACTCATCCTTACGTCCAAAGAT
TCTTGATTCGTTTCGTCTCTCTGTTCAGATCAGTTTCTTCACTGTTTGGTCCTACGATACATGTAGCTAGCTAGGCTGTA
C--TG----TAGTAGAGAAATGTTCAGATACCT-----------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--S
----S------S---S-------S----------------S-------------SSSS----------------------
------------------SS------S--------------------------------S--------------------
------------S----------------------S------------------S-----------------------SS
-----------------------------------------------S--------------------------------
-SS-S-----------------------------S---------------------------------------SSSS--
--------------------------------------------------------------------------------
------------------S-----------------------------------------S-------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
------S-------------S---S--S----------------------------------------------------
--------S--------------------S------------------------------------S-------------
---------------------------------------------------------------------SSSSSS-----
----------------------------------------------SSS--SS---SSSSSSSS-SSSSS-S--------
-------------------------SS-SS-SSSSSSSSSSSSS----------S-----S-------------------
-------S------------------------------------------------------------------------
----------------------------S--------S------------------------------------------
---------------------------------------S----------------------------------------
----------S----------------S--------------S---SS-------------S----------S-------
---SSSS----------SS--SS-----------SS--------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S--S---S-S---------------------------------------------
--S--------------------------------------------------------SS-S-----------------
------------------------------------------------------------------S-------------
-------------------------------S------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S----------------------------------------------------------------------------S--
---------------------------------------------------------------------S----------
------------------------------------S-----------------------S---S-------S-------
-----------------------------S--------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-----S-----------SSSSSSSSS------S-------S------S---S------------S--SSS----------
-------------------------S-----SS-------S---S-----S----------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------SS--S------------
S-----S--SSS-------------S---S----S-S-----------S-S-----SSSS-------S------S----S
----SS---------------------------S--S-----S----------------------------S-SSS----
-------------------------------------------------S---SSS---------------------S--
-----S-------SSSSSSSS-----S--SS--S--------S-------------------------------------
------------------------------------------------------------S---S---S-------S---
--------S-------------------------------------SSSSSSSSSSSSSSSSS-----------------
--SS----S---------------------------S---------S----------------S-S---------S----
------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_161
--------------------------------------------------------------------------------
-------------------------------------------------------------TGAGACTCCTGGACTCCTG
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_1069
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ATCGTGATCAGCCTCCTCCT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_162
--------------------------------------------------------------------------------
--------------------------------------------------------------GAGACTCCTGGACTCCTG
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>reverse_1863
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TCTACGTGTGATGCAGACGG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>forward_163
--------------------------------------------------------------------------------
---------------------------------------------------------------AGACTCCTGGACTCCTG
GTC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>reverse_2110
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------CCTCAACCCGTGGGGCATC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------
>forward_507
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GTGACGGGACTCCCTAGCTA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_2380
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGGGTTTCTCGGCATGGTG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>forward_1474
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GACGTTACGTGCCGACAAAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_6011
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GCCTCATAGGGTGCGATACC--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
