>input_sequence_45850
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---------------------------------ATGATCGCGTTGTGGGTTGCTGCCTGCAGCCTGCTGTCGTGGTGTTC
GTCGCTCTCGGGTGAGACCAGTAAATTGCAGTT-----------TATATTACTGATCGATAGATCGTCGCTTGATTGCTA
GCTCCGCATTGATCAATGTTTGATGCTGGCGCACTAGCTACTTTTATCCTACTGTCATGAACGCTATTATGTTGTTCATC
GTTCCTTATGCAGTTCTCTTGGCTATACC-TCCTATCCTTTTCGAATTTGCGTCTCCT--TGCAGGAGCAAAAGGGTTAT
GTTCATCGC-------AAAGCATGTAAACCAGTTTCGACGGAGCACCAAAACAGCATGCTTTTGCTTAGATAAATTGACT
ACACACTATTGCTTGGCTTATTTATTGCTTGCTGTTGAAGGTGGTTGATAATTCTATTCATTGTGCATTGGTTAGGATGT
CTGGCATAAATCCGTATAGGTCTCTTTGATTC------------------------------------------------
-CTGTCCATGGGGTTTATGAAAGTGGAACCCTAAAGTAC---------------------------------------TT
CTTAATTAAGGGCAGTACTCTACTGTACTCCTTTCCGAACAAAGGTAACTCATTTATAAGGAATCAAAGGATCTACAGTG
GAAA----AAAGGAAAGAAAGGAACGATCAATCCCATGCAGTTATGAGATGCACACATCGTGT--ACATTTACTTAGTAC
GTG------TGCTAAAATTTCGGGCTTACAGTTACCGTTCATGTGTTCATCACGTGCAGGAGTCGAAGGAATTGGAGTCA
ACTATGGCATGATGGGCAGCAACCTCCCGTCCCCGGACAAGGTGGTGGCGCTGTACAAAGCCAACAACATCACCGACGTC
CGCATCTTCCACCCGGACACCAACGTCCTCGAGGCCCTCCGCGGCTCAGGCCTCGGCGTCGTCCTCGGCACGCTCAACAG
CGACCTCGCCCCGCTCGCCTCCGACGCCTCGTACGCCGCGTCATGGGTGCAGTCCTACGTGCAGCCCTTCGCCGGCGCCG
TGAGCTTCCGCTACATCAACGCCGGGAACGAGGTCATACCGGGGGAGTCCGCCGGTCTGGTGCTCCCCGCCATGCAGAAC
CTCGAGGCCGCGCTCCGGGCCGCGGGGCTCA---GTGTGCCGGTAACGACGGCCATGGCGACGTCGGTGCTCGGGACCTC
GCACCCGCCGTCGCAGAGCGCGTTCTCGGAGGCGGCGCTGCCGACGGTCGGGCCGATCGTCTCCTTCCTGGCGTCGAGGG
GCACGCCGCTGCTCGTGAACGTGTACCCGTACTTCGCCTACTCGGCGGAGCCGTCCTCGGTGCCGCTCGACTACGCGCTC
CTGTCGTCGTCGGCCGCGGT------------------GGCGGTGACCGACAACGGGGTTGAGTATGCCAACATGTTCGA
CGCCATCCTGGACGCGGTGTACGCGGCCGTGGAGAAGGCCGGGGGCGGGGAGAGCATGGCGCTGGTGGTGTCGGAGACCG
GGTGGCCGTCGGGCGGCGGCGGGTACGGCGCCAGCGTGGAGAACGCGGCGGCGTACATCAACAACCTGGTCCGGCACGTG
GGGCG------CGGCACGCCGCGGCGGCCCGGGAAGGCCGTGGAGACGTATATCTTCGCCATGTTCAACGAGAACCAGAA
GCCCGAGGGCGTGGAGCAGTACTTCGGGATGTTCCAGCCGGACATGAGCCAGGTCTACCACGTCGACTTCTCGGCTTCGT
CCT-AA--------------------------------------------------------------------------
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---------------------------------------------------
>chr3A_1_TraesCS3A01G330500
AGCAGTGGCACAGAAGACGTACGTAACGATAAGGGCATGTGCAATGGTTCTATCTTAAAAGTGCCATGTAGGATAAATGA
TGAGGTGGAGGAGAGAGAAATCATAAGAGAAGACTTGTCTTATCTTATTTAAGAGAAGACAAGAGATGATCTCTTAGCAC
AATTTGTCTCATCATATTTTTAGGAACAATTAATTATTGAAGATAAGGCTAAGAGATGACCCATTGTAGGCATGTTTTCT
TGTCATCTCTAATTTATATGCAAAATTTAAGATAAGATTATCTTATCAACCATTGTACATGCCCGTACGGAGTGATCCAT
CGATGGATATGCGATCCATTACTTGATATACTTCCTTCTTATCGACGAAATCATTTGTAATGTGTATATATGGTATTATA
TCTACAA---TAAATCAGCAACTACGAGCAATGGATTTAGCAGGTTCATCCACGGGAAAGTCCCGTTTCTTCTGCAAGGA
AG--TAGTACCTGCATTTTCCTTTCCCCGACACCTTAACAGCCATTTAATGACGATCACGGCAGAGCAAACTAACCGAAG
GATTCCAAGACACGTTAC---------ATTATCACATGCAATGGAAGGTAAAACTAAGGGGGAAAG-CACACGTGGTACG
GCCGCGCCTCCTACTGGCGG--------ACGTACGTGCATGGCAACATCGACCGATGAGGGATGGGATCGGTCAGTTGCC
GTCGGTTCGCTCGTCCATGTCTGTTACCCGCACACGGCGACCCACGTAAAACCGCGTGCCGGGCGGGTCGTCGTGCCCGT
CGGGTGTCCGTATGACGCGGACGCGCACGTACGGTGCATGCGGCCGTGCACGTACCGCACGACCCCGAGCCCTCCGGTGG
TTGCGCGCCTTCCAAAACACGAAGCCTCGCCGGCTATATATACGCGGGAGCACCGCACGTCCACACCGCATCACCGCATC
GTCGCATCCCATCGCACGACGAGGGAGGGAAACTAGGAGCGAACCAAGGGAAGGGAAGA---------------------
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-----------------------------GAAGATGATCGCGTTGTGGGTTGCTGCCTGCAGCCTGCTGTCGTGGTGTTC
GTCGCTCTCGGGTGAGACCAGTAAATTGCAGTT-----------TATATTACTGATCGATAGATCGTCGCTTGATTGCTA
GCTCCGCATTGATCAATGTTTGATGCTGGCGCACTAGCTACTTTTATCCTACTGTCATGAACGCTATTATGTTGTTCATC
GTTCCTTATGCAGTTCTCTTGGCTATACC-TCCTATCCTTTTCGAATTTGCGTCTCCT--TGCAGGAGCAAAAGGGTTAT
GTTCATCGC-------AAAGCATGTAAACCAGTTTCGACGGAGCACCAAAACAGCATGCTTTTGCTTAGATAAATTGACT
ACACACTATTGCTTGGCTTATTTATTGCTTGCTGTTGAAGGTGGTTGATAATTCTATTCATTGTGCATTGGTTAGGATGT
CTGGCATAAATCCGTATAGGTCTCTTTGATTC------------------------------------------------
-CTGTCCATGGGGTTTATGAAAGTGGAACCCTAAAGTAC---------------------------------------TT
CTTAATTAAGGGCAGTACTCTACTGTACTCCTTTCCGAACAAAGGTAACTCATTTATAAGGAATCAAAGGATCTACAGTG
GAAA----AAAGGAAAGAAAGGAACGATCAATCCCATGCAGTTATGAGATGCACACATCGTGT--ACATTTACTTAGTAC
GTG------TGCTAAAATTTCGGGCTTACAGTTACCGTTCATGTGTTCATCACGTGCAGGAGTCGAAGGAATTGGAGTCA
ACTATGGCATGATGGGCAGCAACCTCCCGTCCCCGGACAAGGTGGTGGCGCTGTACAAAGCCAACAACATCACCGACGTC
CGCATCTTCCACCCGGACACCAACGTCCTCGAGGCCCTCCGCGGCTCAGGCCTCGGCGTCGTCCTCGGCACGCTCAACAG
CGACCTCGCCCCGCTCGCCTCCGACGCCTCGTACGCCGCGTCATGGGTGCAGTCCTACGTGCAGCCCTTCGCCGGCGCCG
TGAGCTTCCGCTACATCAACGCCGGGAACGAGGTCATACCGGGGGAGTCCGCCGGTCTGGTGCTCCCCGCCATGCAGAAC
CTCGAGGCCGCGCTCCGGGCCGCGGGGCTCA---GTGTGCCGGTAACGACGGCCATGGCGACGTCGGTGCTCGGGACCTC
GCACCCGCCGTCGCAGAGCGCGTTCTCGGAGGCGGCGCTGCCGACGGTCGGGCCGATCGTCTCCTTCCTGGCGTCGAGGG
GCACGCCGCTGCTCGTGAACGTGTACCCGTACTTCGCCTACTCGGCGGAGCCGTCCTCGGTGCCGCTCGACTACGCGCTC
CTGTCGTCGTCGGCCGCGGT------------------GGCGGTGACCGACAACGGGGTTGAGTATGCCAACATGTTCGA
CGCCATCCTGGACGCGGTGTACGCGGCCGTGGAGAAGGCCGGGGGCGGGGAGAGCATGGCGCTGGTGGTGTCGGAGACCG
GGTGGCCGTCGGGCGGCGGCGGGTACGGCGCCAGCGTGGAGAACGCGGCGGCGTACATCAACAACCTGGTCCGGCACGTG
GGGCG------CGGCACGCCGCGGCGGCCCGGGAAGGCCGTGGAGACGTATATCTTCGCCATGTTCAACGAGAACCAGAA
GCCCGAGGGCGTGGAGCAGTACTTCGGGATGTTCCAGCCGGACATGAGCCAGGTCTACCACGTCGACTTCTCGGCTTCGT
CCTAAGAAGACGCCTGGCTGCTGCATGGACCACGCATGTGCATCGATCATCCATTAGTTAGGAAAAATTATAGGGTAGGA
CCGATTCTGTTTATTTGAGCTTCTGGATCTCTCATTATCCCTCGAGAAGTAGAACTTATGAGTTATGATGTGACATGGAT
ATTTATGCTGCAATATGGTTATACAGTATATATATGGAGTATCTTCAAAGGGAAGGTTGTGGCTGTGTTCGCGTTTTTCC
ATCTTTTCATTTTGTTTTTAGCCTCAGGCGCACAACACACACCACACGCATGCACGCGCACCACCACACATATCTGCTAT
GCACGGCACGTCATCAACTCATCATTCCGTAAAGGAACACGGAGGGCAATTGGGAAGGCGGTCGCGTGGTGACTGTCCTC
CTTCGCTCGGGTTAGGGTTCCTGGACGGGGGTGGTGAGGTTAAGAAGGTGATCGGGGGCGGTGACTGCGCTTCCCTAGGC
ACAGATCGGTGTAGTCTCTCTTCTCCACGGAGCAGAGCTATGGCGGAGAGGACGAAGGGAAAGGAGAAGGGATCTCCGGT
GAAGAAGGCGACCCCGGCGGCGGCTACAACTCCGGGCACTCCTGGGGGCTT------TGCAAAGTCCCCGATCGAAAGCA
AAACACCGGATCCCACAGCAAGCCTGTCGGCTCGATTGGGAGGGATGATTCTGATGGATAAAGAAGCGGAGGGGTTCGTG
TTTGAGGAAGCAGGTCAGATCTTGCCCAAATACACCAAGTGGTCGGCTGTGGGGAAGTCCTTCTCCCCACGACCGCTCAA
TAGGGTTGTCCTCGAACGAACAATGGAGCGGGCATGGGGATTACATCACGAAGCTAAGTTCTGGGATATGGGTGACAATA
TATTTGTGGTGCACTTTGGAAGCGAAGGTGACTGGAAGCACGCAATGAGTAATGGACCTTGGCAATATGATTTTAATGTG
CTCGCTCTGAAGGATTATGAGAGTAACACTCGCCCCTCAGAGATGGTGTTT
>chr3B_307
--------------------------------------------------------------------------------
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------------------------------------------------------------------ACGGAGTGATCCAT
CGATGGATATGCGATCCATTGCTTGATATACTTCCTTCTTATCCACGAAATCATTTGTAATGTGTA----TGGTATTATA
TCTA-AA---TAAATCAGCAAGTACGAGCAATGGATTTAGCAGGTTCATCCACGGGAAAGCCCCGTTTCTTCTGCAAGGA
AG--TA---CCTGCATTTTCCTTTCCCCGATACCTTAACAGACATT-AATGATGATCAGGGCAGAGCAAACTAACCGAAG
GATTCCAAGACACGTTACTACTCCTAGATTATTACTCTGCATGGAAGGTAAACCTAAAGGGAAAACGTGCACGTGGTACG
GTCGCATGCACCTCCTGCTGGTGGACTCACGTACGTGCATGGCGAT-------------GGATGGGATCGGCCAGTTGCC
GTCGGTTCGCTCGTCCATGTCCGTTACCCGCACACCGCGACCCACGTAAAACCGC--------------GTCGTGCCCGT
CGGGTGTCCGTATGACGCGGACGCGCACGCACGGTGCATGCGTCCGTGCACGTACCGCACGACCCCGGGCCCTCCGGTGG
TTGCGCGCCTTCCAAAACACGAAGCCTCACCGGCTATATATACGCGGGAGCACCGCACGTCCACACCGCATCACCGCA--
-TCGCATCCCATCGCACGACGAGGGAGAGAAGCTAGGAGCGAACCAAGTGAAGGGTGTGTTCGGAAGTCCTCCGCACTCC
CTGCTCCGCGAACTCCACGTGAGAAGTTAGGCTGAACACTCCGTGCTTCCCGGAGCCAGCTTCGAGAAGCTGTACCGAGC
CCTAGTGCAACTTGAACGAGTTTACGAAGCTGGGTTTTCGCAGCTTCACGAGCTTCTCGGAAACGCGTAGTTCGCCCAAA
TTACGCGTCATGCCACCGCCAAGTGAGTCATGCACCGGTTCGTGCGATCCTTATTCTTTTTCTCGCTCGCGGTCCTCACA
GTCGTTGGATTAGGCAGCGTGAACGCATCCTAACGGCGCTCACAACGTTCCTTCAAACTGGGCCAGGCCCAGTGTCTCTC
CTACTCTCCCCGAGCAGGTCTTAGGCCTCGAAGATGATCGCGTTGTGGGTTGCTGCCTGCAGCCTGCTGTCGTGGTGTTC
GTCGCTCTCGGGTGAGTCGAGTAAATTGCAAGTTTATATATATATATATTGCTGAT------------GCTTGATTGCTA
GCTCCGGATTGATCATTGTTTGATGCTGGCGCACTAGCTACTTTTATCCTACTGTTATGAACACTATTATGTTCTTCATT
GTTCCTTATGCAGTTCTCTTGGCTATATCTTCCTATCCTTTTCGATTTTGCGTCTCCCTCTGCAGGAGCAAAAGGGTTAT
GTC-------TATTGAAAAACATGTAAACCAGTTTCGACGTAGCACCAAAACAGCATGCTTTTGCTTAGATAAATCGACT
ACGCAC--TTGCTTGGCTTATTTATTGCCTGCTGTTGGAGGTGGTTGATAATTCTATTCATTGTGCATTGGTTAGGATGT
CTGGCGTAAATCCGTATAGGTCTCTTTGATTCATTGTCAATCTTCCGACATCAATGTTTTGTTTCAACTATATTTGGTAA
CATGTCTCTGGGGTTTATGAAAGTGGAACCCTAAAGTACAAT--------------------------------GCACTT
CTTAATTAAGGACAGTACTCTACTCTACTCCTTTCCGAACAAAGGTAACTCATT---AAGGAATCAAAGGATCTACAGTG
GAAA----AA-GGAAAGAAAGGGACGATCAATCCTATGCAGTTATGAGATGCACACATCGTGTATACATTTACTTAGTAA
GTACGTGTGTGCTATAATTCCGCGCTTACAGTTACCGTTCATGTGTTCATCACGTGCAGGAGTCCAAGGAATTGGAGTCA
ACTATGGCATGATGGGCAGCAACCTCCCGTCCCCGGACAAGGTGGTGGCGCTGTACAAAGCCAACAACATCACCGACGTC
CGCATCTTCCACCCGGACACCAACGTCCTCGAGGCCCTCCGCGGCTCAGGCCTCGGCGTCGTCCTCGGCACGCTCAACAG
CGACCTCGCCCCGCTCGCCTCCGACGCCTCGTACGCCGCGTCATGGGTGCAGTCCTACGTCCAGCCCTTCGCCGGCGCCG
TGAGCTTCCGCTACATCAACGCCGGCAACGAGGTCATCCCGGGGGAGTCCGCCGCTCTGGTGCTCCCCGCCATGCAGAAC
CTCGAGGCCGCGCTCCGGGCCGCGGGCCTCA---GCGTGCCGGTCACAACGGCCATGGCCACGTCGGTACTCGGGACCTC
GTACCCGCCGTCGCAAGGCGCGTTCTCAGAGGCGGCGCTGCCGACGGTCGGGCCGATCGTCTCCTTCCTGGCGTCGAGGG
GCACGCCGCTGCTCGTGAACGTGTACCCGTACTTCGCCTACTCGGCGGAGCCGTCCTCGGTGCCGCTCGACTACGCGCTC
CTGTCGTCGTCGGCCGCGGT------------------GTCGGTGACCGACAACGGGGTGGAGTACGCCAACATGTTCGA
CGCCATCCTGGACGCGGTGTACGCGGCCGTGGAGAAAGCCGGGGGCGGGGAGAGCCTGGAGCTGGTGGTGTCGGAGACCG
GGTGGCCGTCAGGCGGCGGCGGGTACGGCGCCAGCGTGGAGAACGCGGCGGCGTACATCAACAACCTGGTCCGGCACGTG
GGGCG------CGGCACGCCGCGGCGGCCCGGAAAGGCCGTGGAGACGTATATCTTCGCCATGTTCAACGAGAACCAGAA
GCCGGAGGGGGTGGAGCAGTACTTCGGGATGTTCCAGCCGGACATGAGCCAGGTCTACCCCGTCGACTTCTCGGCATCGT
CGT-AGAAGACGCCTGGCTACTGCATGGACCACGCATATGCATCGATCATCCATTAGTTAGGAAG--TTATTGGGTAGGA
CCGATTCTGTTTATTTGAGCTTCTCGATCTCTCATTATCTCTCGAAAAGTACATACTTA---------------------
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---------------------------------------------------
>chr3D_307
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--------------------------------------------------------------------------------
------------------------------------------------------------------ACGGAGTGATCCAT
CGATGGATATGTGATCTATTACTTGATATACTTCCTTCTTATCCACGAAATCATTTGTAATGTGTA----TGGCATTATA
TCTACAACAGTAAATCAGCAAGCACGAGCAATGGATTTAGCAGGTTCATCCACGGGAAAGTCCCGTTTCTTCTGCAAGGA
AGTATA---CCTGCATTTTCCTTTCCCCGATACCTTAACAGCCATTTAATGATGATCACAGCAGAGCAAACTAACCGAAG
GATTCCAAGACACGTTAC---------ATTATCACATGCAATGGAAGGTAAACCG-AAGGGAAAACACACACGTGGTACG
GTCGCATGCACCTCCTGCTGGTGGACTCACGTACGTGCATGGCGAT-------------CGATGGGATCGGCCAGTTGCC
GTCGGTTCGCTCGTCCATGTCCGT-------------------------------------------------TGCCCGT
CGGGTGTCCGTAGGACGCGGACGCGCACGTACGGTGCATGCGGCCGTGCACGTACCGCACGACCCCGGGCCCTCCGGTGG
TTGCGCGCCTTCCAAAACACGAAGCCTCACCGGCTATATATACGCGGGAGCACCGCACGT-CACACCGCATCACCGCA--
-TCGCATCCCATCGCACGACGAGTGAGGGAAGCTAGGAGCGAACCAAGGGGAGGGAAGA---------------------
--------------------------------------------------------------------------------
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-----------------------------GAAGATGATCGCGTTGTGGGTTGCTGCCTGCAGCCTGCTGTCGTGGTGTTC
GTCGCTCTCGGGTGAGTCGAGTAAATTGCCAC--TTTATATATTATTATTACTGATCGATAGATCGTCGCTTGATTGCTA
GCTCCCGATTGATCATTGTTTGATGCTGGCGCACTAGCGACTTTTATCCTACTGTTATGAACACTATTATGTTCTTCATT
GTTCCTTATGCAGTTCTCTTGGCTATATCTTCCTATCCTTTTCGATTTTGCGTCTCCT--TGCAGGAGCAAAAGGGTTAT
GTCATGTGTCTATTGAAAAACATGTAAACCAGTTTCGACGGAGCACCAAAGCAGCATGCTTTTGCTTAGATAAATCGACT
ACACAC--TTGCTTGGCTTATTTATTGCTTGCTGTTGGAGGTGGTTGATAATTCTATTCATTGTGCATTGGTTAGGATGT
CTGGCATAAATCCGTATAGGTCTCTTTAATTCATTGTCAATCTTGTGACATCAATGTTTTGTTTCAACTATATTTGGTAA
CCTGTCTGTGGGGTTTATGAAAGAGGAACCCTAAAGTACAATGCACTTATTTCACAAAAAAGAAGAAGTACAATGCACTT
CTTAATTAAGGACAGTACTCTACTCTACTCCTTTCCGAACAAAAGTAACTCATT---AAGGAATCAAAGGATCTACATTG
GAACAAGGAAAGAAATTAAAGGGACGATCAATCCCATGCAGTTATCAGATGCACACATCGTGT--ACATTTACTTAGTAC
GTGCGTGC------TAATTTCGTGCTTACAGTTACCGTCCATGTGTTCATCTCGTGCAGGAGTCCAAGGAATTGGAGTCA
ACTATGGCATGATGGGCAGCGACCTCCCGTCCCCGGACAAGGTGGTCGCGCTGTACAAAGCCAACAACATCACCGACGTC
CGCATCTTCCACCCGGACACCAACGTCCTCGAGGCCCTCCGCGGCTCAGGCCTCGGCGTCGTCCTCGGCACGCTCAACAG
CGACCTCGCCCCGCTCGCCTCCGACGCCTCGTACGCCGCGTCATGGGTGCAGTCCTACGTCCAGCCCTTCGCCGGCGCCG
TGAGCTTCCGCTACATCAACGCCGGCAACGAGGTCATCCCGGGGGAGTCCGCCGCTCTGGTGCTCCCCTCCATGCAGAAC
CTCGAGGCCGCGCTCCGGGCCGCGGGGCTCA---GCGTGCCGGTCACGACGGCCATGGCGACGTCGGTGCTCGGGACCTC
GTACCCGCCGTCGCAGGGCGCGTTCTCGGAGGCGGCGCTGCCGACGGTCGGGCCGATCGTCTCCTTCCTGGCGTCGAGGG
GCACGCCGCTGCTCGTGAACGTGTACCCGTACTTCGCCTACTCGGCGGAGCCGTCCTCGGTGCCGCTCGACTACGCGCTC
CTGTCGTCGTCGGCCGCGGT------------------CGCGGTGACCGACAACGGGGTGGAGTACGCCAACATGTTTGA
CGCCATCTTGGACGCGGTGTACGCGGCCGTGGAGAAGGCCGGGGGCGGGGAGAGCCTGGAGCTGGTGGTGTCGGAGACCG
GGTGGCCATCGGGCGGCGGCGGGTACGGCGCCAGCGTGGAGAACGCGGCGGCGTACATCAACAACCTGGTCCGGCACGTG
GGGCG------CGGCACGCCGCGGCGGCCCGGGAAGGCCGTGGAGACGTATATCTTCGCCATGTTCAACGAGAACCAGAA
GCCGGAGGGCGTGGAGCAGTACTTCGGGATGTTCCAGCCGGACATGAGCCAGGTCTACCACGTCGACTTCTCGGCATCGT
CGT-AGAAGACGCCTGGCTGCTGCATGGACCACGCATATGCATCGATCATCCATTAGTTAGGAAG--TTATTGGGTAGGA
CCGATTCTGTTTATTTGAGCTTCTCCATCTCTCATTATCTCTCGAGAAGTA-----------------------------
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---------------------------------------------------
>chr1B_1716
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---------------------------------------------------------------------AATTGGTGTGA
ACTACGGCATGATCGCCAACAACCTGCCGACGCCGGACAAGGTGATCGCCATGTACAAGGCCAACAAAATCAGCTACGTC
CGCCTCTTCCACCCTGACACGACCGTCCTCACCGCGCTCCGGGGCACGGGCATTGGCGTCGTCCTCGGCACGCTCAACGA
GGACCTTGCCCACCTCGCCTCCGACGAGTCCTTCGCCGCCTCGTGGGTGGCCTCCTACGTCAAGCCCTTCGCCGGCGCCG
TCACCTTCCGGTACATCACGGCCGGCAACGAGGTCATCCCGGGCGACCTCGGAACGCACGTCCTCCCCGCCATTAGGAAC
ATCGAGACCGCGCTCAAGGCGGCGGGCGTCACCGGCGTCCCGGTCACAACGGCCGTGGCCACGTCAGTGCTCGGCGTGTC
ATACCCGCCGTCGCAGGCCGCGTTCTCCGAGGCGTCGGCGCCGGTGATGGCGCCGTTGGTGGCGTACCTGTCGTCGAAGA
AGGCGCCGCTGCTGGTGAACGTGTACCCTTACTTCGCGTACGCGGCGGAGCCGGAGACGGTGCAGCTCGGGTACGCGCTG
CTGGCCGGGTCGAGCGCAACGTCCAAGATCAAGGTGTCGTCGGTGACGGACGGCGGGCTGGTGTACACCAACATGTTCGA
CGCGATCCTGGACGCGGCGCACGCGGCGGTGGAGAAGGCCGGGGCGCAGGGG---CTGGAGCTGGTGGTATCGGAGACCG
GGTGGCCGTCGGGCGGCGGCGGCACGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACGTGATCCGGCACGCG
GCGTCGGGCGCAGGCACGCCGCGGCGGCCCGGCAAGGCCGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAA
GCCCGAGGGCACGGAGCAGCACTTCGGCCTCTTCCAGCCGGACATGAGCGCCGTCTACCCCGTCGACTT-----------
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---------------------------------------------------
>chr1A_1717
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----------------------------------------------------------------------ATTGGTGTGA
ACTACGGCATGATCGCCAACAACCTGCCGACGCCGGACAAGGTGATCGCCATGTACAAGGCCAACAAAATCAGCTACGTC
CGCCTCTTCCACCCGGACACGACCGTCCTCACCGCGCTCCGGGGCACGGGCATCGGCGTCGTCCTCGGCACGCTCAACGA
GGACCTCGCCCACCTCGCCTCCGACGAGTCCTTCGCGGCCTCGTGGGTGGCCTCCTACGTCAAGCCCTTCGCCGGCGCCG
TGACGTTCCGGTACATCACGGCCGGCAACGAGGTCATCCCGGGCGACCTTGGCACGCACGTCCTCCTCGCCATTAGGAAC
ATCGAGACCGCGCTCAAGGCGGCGGGCGTCACCGGCGTCCCGGTCACGACGGCCGTGGCCACGTCAGTGCTGGGCGTCTC
GTACCCGCCGTCGCAGGCCGCGTTCTCTGAGGCGTCGGCGCCGGTGATGGCGCCGCTGGTGGCGTACCTGTCGGCGAAGA
AGGCGCCGCTGCTGGTGAACGTGTACCCGTACTTCGCGTACGCGGCGGAGCCGGAGACGGTGCAGCTCGGGTACGCGCTG
CTGGCCGGGTCGAGCGCGACGTCCAAGATCAAGGTGGCAGCTGTGGCGGACGGCGGGCTGGTGTACACCAACATGTTCGA
CGCGATCCTGGACGCGGCGCACGCGGCGGTGGAGAAGGCCGGCGCGCAGGGG---CTGGAGCTGGTGGTGTCGGAGACCG
GGTGGCCGTCGGGCGGCGGCGGGACGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACGTGATCCAGCACGCG
GCGTCGGGCGCCGGCACGCCGCGGCGGCCGGGCAAGGCCGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAA
GCCCGAGGGCACGGAGCAGCACTTCGGGCTCTTCCAGCCGGACATGAGCGCCGTCTACCCCGTCGACTTC----------
--------------------------------------------------------------------------------
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---------------------------------------------------
>chr1D_1717
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----------------------------------------------------------------------ATTGGTGTGA
ACTACGGCATGATCGCCAACAACCTGCCGACGCCGGACAAGGTGATCGCCATGTACAAGGCCAACAAAATCAGCTACGTC
CGCCTCTTCCACCCTGACACGACCGTCCTCACTGCGCTCGGGGGCACCGGCATTGGTGTCGTTCTCGGCACGTTCAACGA
GGACCTTGAGCACCTCGCCTCCGACGAGTCATTTGCCGCATCGTGGGTGGCCTCCTACGTCAAGCCCTTCGCCGGCACCG
TCACCTTCCGGTACATCACGGCCGGCAACGAGGTCATCCCGGGCGACCTTGGCACGCACGTCCTCCCCGCCATTAGGAAC
ATCGAGACCGCGCTCAAGGCGGCGGGCGTCACCGGCGTCCCTGTCACGACGGCCGTGGCCACATCCGTGCTCGGCGTCTC
GTACCCGCCGTCGCAGGCCACGTTCTCCGAGGCCTCGGCGCCGGTGATGGCGCCGCTGGTGGCGTACCTGTCGTCGAAGA
AGGCGCCGCTGCTGGTGAACGTGTACCCGTACTTCGCGTACGCGGCGGAGCCGGAGACGGTGCAGCTCGGGTACGCGCTG
CTGGCCGGGTCGAGCGCGACGTCCAAGATCAAGGTGTCGTCGGTGACGGACGGCGGGCTGGTGTACACCAACATGTTCGA
CGCGATCCTGGACGCGGCGCACGCGGCGGTGGAGAAGGCCGGGGCGCAGGGG---CTGGAGCTCGTGGTGTCGGAGACCG
GGTGGCCGTCGGGCGGCGGCGGCACGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACGTGATCCGGCACGCG
GCGTCGGGCGCCGGCACGCCGCGGCGGCCGGGCAAGGCCGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAA
GCCCGAGGGCACGGAGCAGCACTTCGGCCTCTTCCAGCCGGACATGAGCGCGGTCTACCCCGTCGACTTC----------
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---------------------------------------------------
>chr5D_3007
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---------------------------CGTAAAGGAACACGGAGGGCGATTGGGAAGGCGATCGCGTGGCGACCGTCCTC
CTTCGCTAGGGTTAGGGTTCCTGGACGGGGGTGGTGAGGTTCCGAAGGTGATCGGGGGCGGCGACGACTCTTCCCTCGAC
ACAGATCGGTGCAGTCTTTCTTCTCCACGGAGCAGAGCTATGGCGGAGAGGGCGAAGGGAAAGGAGAAGGGATCCCCGAT
GAAGAAGGCGACCCCGGCGGCGGCTACAACTCCGGGCACTCCTGGGATCGGGGGCGCTGCAAAGTCCCCGGTCGAAAGCA
AAACACCAGATCCCACAGCAAGCCTGTCGGCTAGATCGGGAGGGATCATCCTGATGGTTAAAGAAGCGGAGGGGTTCGTG
TTTGAGGAAGAAGATCAGATCTTGCCCAAATACACCAAGTGGTCGGCTGTGGGGAAGTCCTTTTCCCCACGACCGCTCAA
TAGGGTTGTGCTTGAACGAACAATGCAGCGGGCATGGGGATCACATCATGAAGCTAGGTTCCGGGATATGGGTGACAATA
TATTTGTGGTGCACTTTGGAAGTGAAGGTGACTGGAAGCACGCAATAAATAATGGACCCTGGCAATATGATTTTAATGTG
CTCGCTCTGAAGGATTATGAGAGTAACACCCGCCCCTCCAAGATGGTGTTT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
-------------------------------------------S----------------------SSSS----------
---------------------S----------------------------------------------------------
------SSS---------------------S---------------------S---------------------------
----------------------------------------------------S----S---S---S--------------
-S---SSSSS-SS-SS--S------------------------S-SSSSSSSSSSSSSS------------S--------
---------------------S-------------S-------------------SSSSSSSSSSSSSS-----------
-------------------------------------------------------------------S------------
----------------------------S-------------------------------------------------SS
S------------------------------S------------------------------------------------
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----------------S-S-----------SS------------------------------------------------
------S--------S---------------------------------------S------S----------S-----S
---------------------------S-----------------S----------------------------------
--SSSSS-S----------S-------------------------------------------------------S----
------SS-----------------------------S------------------------------------------
--------------------------------------------------------------------------------
------SS------------------------------------------------------------------------
-----------S------------S-----------------------------SSS-----------------------
----------------------S---------------------------------------------------------
--------------S-------S-----------------------------------------S---------------
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------------------------------------------------------------S-------------------
-------------------------S-----------S----------------S-------------------------
-----------------------------------S--------S-----------------------------------
-S--------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S-----S--------------
-------------------------------------------------------S---S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-S-S---------------------------------S--------------------------SSS----S--------
------------------------S--------------S-----------S-SSS-SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S------------S--------S---S------
-------S---------------------------------SS------------------S---SS-S-------S-S-
-----------S-----S---------------------------------S----------------------S---S-
----------------------------------------------SS-SS-------------------S---------
-------S------------------------S---S---------S--S-------S----------------------
----------S--S------------------------------------------------S-----------------
---------S--S------------S---------------S------S-------S----S------------------
----------------------S-----------------------S-S---------S---------------------
-----------------------------S--------SS-----------
>forward_23
---AGTGGCACAGAAGACGTACG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_2506
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GAACGAGGTCATACCGGGG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_51
-------------------------------AGGGCATGTGCAATGGTTCT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_2860
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGAGTATGCCAACATGTTCGA
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_2225
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TTCATCACGTGCAGGAGTCG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_3810
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TTTGCAAAGTCCCCGATCGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
