>input_sequence_45845
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-------------------------------------------------------TGATATAAGCAAGCACGTAGGA---
-GTAGGCACAGAGGGAACAAGACAAGCAACCAAACCGAACCCCACTTCAATTTGTGATCGACGACCTCAGCGGGCGGCTA
CTTCTTCCTCTCTCTCGTCTTCTTCTCTCATCATCATCGTCG----------------------------------GTTC
CACTCCCACCTCTCCTGCGTTTCATT-------TCCATTTCCATGGCGCGGTCAACTCCACGGTAGTGACTAGTGACCTG
GGCGACCACATAAACCCGCCATCGATCATCGCTCTGCCGTCGACCGTTCGACCGAT------------------------
-----------------CGTAAGTGGCCATGGCGAAAACCCTGCTGCTCCTGCTGCTCTGCGCCACGATCGCCGCACGGG
CGCACGCGCAGGCGCCTGCGCGGCCGGCGGAGGAGGAGACGCCGCCTGGGGCGGGCGTGAAGGTGTCGTTCCGGCCGAGC
GTGGCCATCGTGGTGGGCATCTTCACCATGATCTTCTCCCTCACCTTCCTCCTCCTCATGTACGCCAAGTTCTGCCACCC
CGCCAACACGCCACTCCTCCCCG---CCACCACCGCCAGCCCGTCCCGCCCACCTGCAACAACGGCAGAGGCCGCGGCGG
CCTTGGAGGAGGCGGGCGCCGGCGTGGGCAAGGCGGTGATCGAGTCGCTGCCCTTCTTCCGGTTCGCGGCGCTGCGCGGG
GCGCGGCAGGGGCTGGAGTGCGCCGTGTGCCTGGCCCGCTTCGACGACGCCGACCTGCTCCGCCTGCTCCCGCGCTGCCG
CCACGCCTTCCACCTCGACTGCGTCGACCGCTGGCTGCACTCCAGCGCCAGCTGCCCGCTCTGCCGCGCCCGCGTCCACC
CCGACGACGCCGACCTCGGCCTCAAGTACGCCGCCGCCAGCGCGCGATTCGTCTTCGGCGCAGCAGGCGACGACGCTACT
GTCGGTGCGGCAGTGCCGTCGTCAGCAGGGTCCGGCCGCGACCTCCTCGCCGGCATCTTTGTCGAGCGCGTGCCGTCGGC
GCGCTTCGGTGA---------------------TGATGATGCCGGTGCTGCCGATGATTCTTGTAACAAGGTGGAGCTGG
ACCGGCACCGGCACCGCATCGTGGTGTCTGACAGCGTGTTCAAGAGCCGGTGGAGCGACCTCAACTCGGCGGACCTCATC
GCGCTGGACACCGAGATGCTGCGCTCCGTCTCCAGCGGCCGCTTCCCCTACCCGTACCCCTACCCCGACGACGACATTAT
CTTCGTGGGAGACGAGCACGACGAGGAGGAGCAACCTCGAAAGCCGGGCCGAGACGATGACGACGGCGCCCGCATGTCCA
TTGAGATTGAGAAGAAGCGGCTGCTGGACGTGGAGGTGGGGAGCGGCAGCAAGACAGGGCCCAGCCTGG-----------
-GAGGGTGCGGCGGGTCGGAGGCGGTGGAGCCATCGTCGGTGCGCGCGGCGTCGAGGCTGGTGTCGTCGGGCGTGCGGTC
CATGTCGGAGATCGTGCGGCTGCCTCGGGTGGCGGTAAGGGCGACGGAGGAGGAGGAGAGGGCGCGGCAGCGGTGGGTGC
CCATCGCGCGGCGGACGGCGCGGTGGTTCGCGGC------CAGGAGCAGGGAGGAGGACGTCAACGCCGCCGACCGCCTC
CGCCTCCGTGTGTAATAATGTAATAATGTGAAGAAGAGAAACTACGGCGGGCGCTG--------------TCAATCAATC
AGTGAGTCAGTCAACGGTTAA-----------------------------------------------------------
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-----
>chr1D_1_TraesCS1D01G453000
CGGTTGTTTTGAGCATCTGTTGCGAGTGTTTCGACTCCACGTCAACATTTTTTTATCCAAGTTGCATCTTGAGTAATTGC
AACCATGGGAGCACACATATTGCAATTGGATTGGTTTGTTGGTTGCCACTCTGCTCTGGTTGAAGTTATTAACTTGTAGT
TTGCACAACATCTCTTTTATCAGTCACATGGGAGTCTGTACATGCATCCATTTGCTAGTAAAATTTAAACTTTTGGACAC
TAGGCATGCACGCGTGAGAAAATACCTAATACTCCCTCTGTAAAGAAATGTACGAGTATTTAGATCACTACTTTAGTGAT
CTAAATGCTTTTATATCTGTTTACAGAGGCAATACAAGACATGAACACAAGTCATTATACATTTATATATAAAAAAAGAT
GGCCCCGGCTTCTGCATCTGGACAACGCATGCAGCCACAACAAGTCATCATGCATGAGACTCAGAGATCAAACACACGTG
CATACTTATATTGGCTCTGTA------CTACGTAGTTGATTCCCAGTATTACATCCACTGGAGCACAAAGTAGAAATAGA
AGCAAGGAGGATTTGTTTACCGGGCA-----TGTCTTGTTGAACTGGCTTTTCCTTTATTTTGTCAAACCGTTGGTCAAA
ATGTTTGCGTGAGTCAATATGAGTTGTGCGCATCTCATTATGCACAGGCTAGCTGAGTGTGGATTCTTTACGGTTACAT-
---GGCCTCGATGCGGACGTCAAAAGT-----------------------------CAATAAAACCTATGTTCATCATAA
GAAGAAAAATGATATAGCTCATATATACACC---ATCGATAGGTACTTGTCGTGACAAAAAAAAAACTGAAGAAGAAAAA
TGACAGGCGACATCAAATCATATATGTGGCCGGCCTTGCGTATGTATGATCCGGCGGTCCGATGAAGAAGAAG-------
--AAGAAGAAGAAGACGGCGACTTTCAATATGGAAATAAAAGA-------------------------------------
--GATGGATGGGACCCACCACGTAGAGGAGGAAGTCAGTGGCCTGGCAATGTTGATGATATAAGCAAGCACGTAGGA---
-GTAGGCACAGAGGGAACAAGACAAGCAACCAAACCGAACCCCACTTCAATTTGTGATCGACGACCTCAGCGGGCGGCTA
CTTCTTCCTCTCTCTCGTCTTCTTCTCTCATCATCATCGTCG----------------------------------GTTC
CACTCCCACCTCTCCTGCGTTTCATT-------TCCATTTCCATGGCGCGGTCAACTCCACGGTAGTGACTAGTGACCTG
GGCGACCACATAAACCCGCCATCGATCATCGCTCTGCCGTCGACCGTTCGACCGAT------------------------
-----------------CGTAAGTGGCCATGGCGAAAACCCTGCTGCTCCTGCTGCTCTGCGCCACGATCGCCGCACGGG
CGCACGCGCAGGCGCCTGCGCGGCCGGCGGAGGAGGAGACGCCGCCTGGGGCGGGCGTGAAGGTGTCGTTCCGGCCGAGC
GTGGCCATCGTGGTGGGCATCTTCACCATGATCTTCTCCCTCACCTTCCTCCTCCTCATGTACGCCAAGTTCTGCCACCC
CGCCAACACGCCACTCCTCCCCG---CCACCACCGCCAGCCCGTCCCGCCCACCTGCAACAACGGCAGAGGCCGCGGCGG
CCTTGGAGGAGGCGGGCGCCGGCGTGGGCAAGGCGGTGATCGAGTCGCTGCCCTTCTTCCGGTTCGCGGCGCTGCGCGGG
GCGCGGCAGGGGCTGGAGTGCGCCGTGTGCCTGGCCCGCTTCGACGACGCCGACCTGCTCCGCCTGCTCCCGCGCTGCCG
CCACGCCTTCCACCTCGACTGCGTCGACCGCTGGCTGCACTCCAGCGCCAGCTGCCCGCTCTGCCGCGCCCGCGTCCACC
CCGACGACGCCGACCTCGGCCTCAAGTACGCCGCCGCCAGCGCGCGATTCGTCTTCGGCGCAGCAGGCGACGACGCTACT
GTCGGTGCGGCAGTGCCGTCGTCAGCAGGGTCCGGCCGCGACCTCCTCGCCGGCATCTTTGTCGAGCGCGTGCCGTCGGC
GCGCTTCGGTGA---------------------TGATGATGCCGGTGCTGCCGATGATTCTTGTAACAAGGTGGAGCTGG
ACCGGCACCGGCACCGCATCGTGGTGTCTGACAGCGTGTTCAAGAGCCGGTGGAGCGACCTCAACTCGGCGGACCTCATC
GCGCTGGACACCGAGATGCTGCGCTCCGTCTCCAGCGGCCGCTTCCCCTACCCGTACCCCTACCCCGACGACGACATTAT
CTTCGTGGGAGACGAGCACGACGAGGAGGAGCAACCTCGAAAGCCGGGCCGAGACGATGACGACGGCGCCCGCATGTCCA
TTGAGATTGAGAAGAAGCGGCTGCTGGACGTGGAGGTGGGGAGCGGCAGCAAGACAGGGCCCAGCCTGG-----------
-GAGGGTGCGGCGGGTCGGAGGCGGTGGAGCCATCGTCGGTGCGCGCGGCGTCGAGGCTGGTGTCGTCGGGCGTGCGGTC
CATGTCGGAGATCGTGCGGCTGCCTCGGGTGGCGGTAAGGGCGACGGAGGAGGAGGAGAGGGCGCGGCAGCGGTGGGTGC
CCATCGCGCGGCGGACGGCGCGGTGGTTCGCGGC------CAGGAGCAGGGAGGAGGACGTCAACGCCGCCGACCGCCTC
CGCCTCCGTGTGTAATAATGTAATAATGTGAAGAAGAGAAACTACGGCGGGCGCTG--------------TCAATCAATC
AGTGAGTCAGTCAACGGTTAAATA-----AATCCGGT----GCTCAAGGAAGGCAAGCAGATGACAAAAATGTTTTGAGA
GACAAGTCCTTGCTTTGACGACGAGAAGAAGATGGTGATCTGATGTTGCACA------TGTA---------TGCGTGTAT
TGTTGTATGTATGTAGGAGTACGATACAATTGTGCATAGGCTAGGTAGCT---AGCACAC----ATGCATGGAATTACTA
G----------CCAATTATTATACTGAAA--TGCCACAAAAATTTACTAGCCAATTATTGTTGTATGTATGTACTACAAT
ACAATTGTGCATACT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------GTAATGATTTTAATCTGACAGCAAAA-TC
ATGTGAGGAGCCAATT---------ATGCAATAATTGGTAGCCAGGTCTAACTGCTCCTGCTACATGT------------
----TACATACATACATACATACATAAACGTAGGTAT-------ATTATTTGGATGCACCTCTCACCTCTGAGCCAT-GA
CATGACTATGAGA---AATAGTATATTAGACCGGCCAACATGTGAGTCTGGCTGAGAATTAGCATG----------CCTG
CATGTGGTTGGCTGCTAGAGTTAGCATGTA-------GTATGTGTGTATGCACAAACAGCAAGATTACAAATAGG-----
--------------GACTAGTTAATTGCAATGCTTGAGGATCAAATAATTCAACTTGGTTATT----CAAACAAAATAC-
------TAATCAGCTTGCTCAACCACCGTTGCAGTTGGAGCTTGATCAATGGCTGCCTGGAGCTGGAGCTGGAGCTGGAC
ATGAATAATAATGCGTTC---------ATGCATCAGATATTACTAGATAGATAGATATGCTGACA----AGACAGATAGA
ATATACTACATCTCCTTCCCGGCCGCCACAT----TACATACATAGGTATATATTTATACATCCGTGTGTACTTGAATTG
GAT----TGCATAATGGTGATGAGGTCAACCAAACCAAACCAAACCAAACCAAACCAATGTGGTTGTATGTATGTATGTA
TATGCAAATATATCTATCTAGATACAAGAAAGAAAGAAAGAAAGAATCCATCCATCCATATATGTAGCACAAGACAAAAC
TAAAG
>chr1B_427
--------------------------------------------------------------------------------
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--------------------------GCATGCGGCCACAACAAGTCATCATACATGAGACTCGGAGATCAAACACACGTG
TATACTTACATTGGCTCTGTAGTACTACTAGGTAGTTCATTCCCAGTATTACATCCGCTGGAGCACAAGGTAGAAATAGA
AGCAAGGAGGATTT-TTTACCGGGCATGTCTTGTCTTGTTGAACTGGC-TTTCCTTCATTTTGTCAAACCGTTGGTCAAA
ATGTTTGCGTGGGTCAATATGAGTTGTGC--------------ACAGGGTAGCTGAGTGTGAATTATGTATGGTTACAT-
---GGCATCGATGC-GACGTCAAAAGT-----------------------------CAATAAAACCTATGTTTATCAGAA
GAAGAAAAATGATATACTAGCTCATACACCATCGATCGATAGGTACTTGTCATGACAGAAAAAT---TGATGAAGAAAAA
TGACAGGCGACATCAAATCATATATGTGGCCGCCCTTGCGTATGTATGATCCGGCGGTCCGGTGAAGAAGAAGAGGAAGA
AGAAGAAGAAGACGACGACGACTTTCGATGTCGAAATAAAAGAGATGGAAGGAAAAGACAGATGGCATGACATGCACTGG
TGGATGAAGGGGGCCCACC-----GAGGAGGAAGTCAGTGGCCTGGCCATGGTGATGATATACGAGTAAGCA----ACCA
CGTAGGCACAGAGGGAACAAGACAAGCAACCAAACCGAACCCCACTTCCATTTGTGATAGACCTCA-------GCGGCTA
CT---------------TCTTCTTCTCTCATCATCATCGTCGTCGTCGTCGTCGGGCTAGCTCATTCCTTCCTTCGGTTC
CGCTCCCGGTCCTA-------------------------TCCATGGCGCGGTACTCGCTCCCACA---------------
------------------------------CTACTGACCTCACCTGGACGACAACCACCGCCATTTCCTCGATCGCCGCC
GATCCTTCTGAATCGTACGTACGTGGCCATGGCGAAAACCATGCTGCTCCTGCTGCTCTGCGCGACGATCGCGGCACACG
CGCACGCGCAGGCGCCGACGCAGCCGGCTGCGGAGGAGACGCCGCCTGGGGCGGGCGTGAAGGTGTCGTTCCGGCCGAGC
GTGGCCATCGTGGTGGGCATCTTCACCATGATCTTCTCCCTCACCTTCCTCCTCCTCATGTACGCCAAGTTCTGCCACCC
CGCCAACACGCCCCTCCTCCCCGCCACCACCACCGCCAGCCCCTCCCGCGCGCCCGCCCCCGACGCCTTGATCGAGTC--
-------GGAGGCCAGCGCCGGCGTGGGCAAGGCGGTGATCGAGTCGCTGCCCTTCTTCCGGTTCGCGGCGCTGCGCGGG
GCGCGGCAGGGCCTGGAGTGCGCCGTGTGCCTGGCCCGCTTCGACGACGCCGACCTGCTCCGCCTGCTCCCCCGCTGCCG
CCACGCCTTCCACCTCGACTGCGTCGATCGCTGGCTGCACTCCAGCGCCAGCTGCCCGCTCTGCCGCGCCCGCGTCCACC
CCGACGACGCCGACCTCGGCCTCAAGTACGCCGCCGCCAGCGCGCGCTTCGTCTTCGGAGCAGGCGACAACGCAGCCGCC
GTTGGTGCCGCCCCCGCACCGTC------CTCCGGCCGCGACCTCCTCGCAGGCATCTTCGTCGAGCGCGTGCCGTCGGC
GCGCTTCGGCGGCATAGGAGACGCTGGCGCCGGTGATGATGCTGGTGCTGCTGATGAGTCTAACTCTA------AGCTGG
ACCGGCACCGGCATCGCATCGTGGTGTCGGACAGCGTGTTCAAGAGCCGGTGGAGCGACCTCAACTCGGCGGACCTCATC
GCGCTGGACACGGAGATGCTGCGCTCCGTCTCCAGCGGCCGCTTCCCCTACC------CCTACCCCGACGACGACATTAT
CTTCCTAGGAGACGAGCCGCCGGAGGAGCGCGGCCA------------CCGAGACGATCACGACGGCGCCGGCGTGTCCA
TTGAGATTGAGAGGAAGCGGCTGCTGGACGTGGAGAGCGGGAGCGGCAGCAAGGCGGCGCCCAGCCTGGTACGTGGACTT
GGAGGGTGCGGCGGCTCCGACGCCGTGGAGCCATCGTCGGTGCGCGCGGCGTCGAGGCTGGTGTCGTCGGGCGTGCGGTC
TATGTCGGAGATCGTGCGGCTGCCTCGGGTGGCGGTAAGG---ACGGAGGAGGAGGAGAGGGCGCGGCAGCGGTGGGTGC
CCATCGCGCGGCGGACGGCGCGGTGGTTGGCCAGCCGGAGCAGGAGCAGGGAGGAGGACGTCAACGCCGCCGACCGCCTC
------CGTGTGTAATG------TAATGTGAAGAAAAGAAACTACGGTAACGGTGGGCGCTATCAATCAATCAATGAATC
AGTGAGTGAGTCAAAGATCAAATC-----AATCCAGTGCTAGCTCAAGGAAGGCAAGCAGATGACAAAAATGTTGAGAGG
ACGACGA------------GAAGAGAAGAAGATGGTGATCTCATATTGCACA------TCAAGGCATGTATTGACTGGTT
GTGTGTATGTACAA-----TACAATACAATTGTGCATAGGCTAGCTAGCACACATGTACATGCGATGCATGGAATTACTA
GTTACTACAATACAATTATTATACTGAAAAATGCCACAAAAATAAATTTACTAGAGACAGAGGAGCAACAAGAGGGAGGA
TGATGTCAACGCCGCCGACCGACCGTCTCC-----------------------GTATGTAAAGAAATAAGATGGTTAGTG
TCAAAAAACGTCTTACCACGACGAGTAAATCGGAGCGGAGGGAGTAGGTAGGAAGGGCGCTAAGCTATCAATCAATCAAG
ATTCAAAAAAGAAAAGATTAGCTAGCTAGTGATGGCAATTCAGCATGCATGCATGTTCAAACACAGCATCATCTTCTTCA
AGATTGATCGCCGTGCACATCAAGTTCAAGTGTAGCATCCAAAAGTCTTCCCCGGGTTGGGTTGGGTTGGGTTGGGTTGG
TTGTAAAATCCTGTTTCTCCTGGGCTGGCCAATGAGAAGTCTTCCT-----TTTAGCCGCCAAAAATTAAAGAATTTGAG
GTGAACATGCATGATGATGCAATCTCTAA----TATTTACTAGTGTGTAGAGTAATGATTTTAATCTGACAGCAAAAATC
ATGTGAGGAGGCAATTGAGAAAAGGATGCAATAATTGGTAGCCAGGTCTAACTGCTGCTGCTACATGCATGTTACATACA
TACATACATACATACATACATACATAAATCTATGTAT-------ATAATTTGGATGCACCTCTCACCACTGAGCC-T-GC
CATGACTATGAGAGAAATTAGTATATTAGACCGGCCAACATGTGAGTCTGGCTCTGGCTGAGAATTACAACTAGTACCTG
CATGTGGTTGGCTGCTAGAGTTT-AGTTAGCATGTATGTATGCACAA----ACAAACAGCAAGATTAGATTACAAATAGG
TAGGGTGTGTGCTAGACTAGTTAATTGCTTGATGTAG---TCAAATAATTCAACTTGCTTATTCAAACAAACAAAATAC-
------TAATCAGCTTGCTCAACCACCGTTGCAGTTGGAGCTTGATCAATGGCTGGCTGGAGCTGGAGCTGGA------C
ATGAATAATATGCACCTGTCATGGATGATGCACCAGATATTACTAGATAGATAGATATATATGCTGACGAGACAGATAGA
ATATACTGCATCTTCTTCCCGGCCGCCACATTACATACATACATAGGAATATATTTATT----CGTTTGTACTTGAATTG
GATTGCATGCATAATGGTGATGAGGTCAACCAAACCAAACCAAACCA----------ATGTGGTTGTATGTATGTATGTA
TGTTCAAATATATCTATCTAGATACAAGAAAGAAAGAAAGAAAGAA----------------------------------
-----
>chr1A_578
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-----------------------GCA-----TGTCTTGTTGAACTGGC-TTGCCTTTGTTTCGTCAAACCGTTGGTCAAA
ATGTTTGCGTGAGTCAATATGAGTTGTGCGCATCTCATTATGCACGGGCTAGCTGAGTGTGAATTCTTTATGGTTACATA
CATGGCCTCGATGA-TACGTCAAAAGTCAATAAAACCTGTGGGTTTTTTTGAGGGACAATAAAACCTATGTTTATCAGAA
GAAGAAATATGATACTCCTACCTTGGTACATCAAAAACAATTCATCCTACGTGAC---AAAAAT---TGAAGAAGAAAAA
TGACAGGCGGCGTCAAATCATATATGTGGCCGCCCTTGCGTATGTATGATCCGGCGGTCCGATGAAGAAGAAAGGCACTT
TCTTTTTCTTTTTTTGAAGGGAA----------------------------GAAAAGACAAGTGGCATGGCATGCACTGG
GGGATGAGCGGGACCCACCACGTAGAGGAGGAAGTCAGTG--------------ATGATATAAGCAACCCAAGCGGACCA
CGTCGGCACAGAGAGAACAAGACAAGCAACCAAACCGAACCT--------------------------------------
-------CTCTCTCTCGTCTTCTTCTCTCGTCGTCGTCGTCGTCGTCGGCCTCATTCCTTCC---TCCTTGATTCGGTTC
CACTCCCACCTCTCCTGGGTAGTCTACTACTTGTCCATTTCCATGGCGCGGTCAAC---CCCGCA---------------
------------------------------GCACTGACCTGGACCGTTCGACCAAT------------------------
-----------------CGTGCGTGGCCATGCCAAAGATCATGCTGCTCCTGCTGCTGGTCTGCTGGACACAGG------
------------------CGCAGCCGGCGGCGGAGGAGACTCCGCCTGGGGCGGGCGTGAAGGTGTCGTTCCGGCCGAGC
GTGGCCATCGTGGTGGGCATCTTCACCATGATCTTCTCCCTCACCTTCCTCCTCCTCATGTACGCCAAGTTCTGCCACCC
CGCCAACACGCCCCTCCTCCCCGCCACCACCACCGCCAGCCCCTCCCGCGCGCCCGCCCCCGACGCCTTGATCGAGTC--
-------GGAGGCCAGCGCCGGCGTGGGCAAGGCGGTCATCGAGTCGCTGCCCTTCTTCCGGTTCGCGGCGCTGCGCGGG
GCGCGGCAGGGTCTGGAGTGCGCCGTGTGCCTGGCCCGCTTCGACGACGCCGACCTGCTCCGCCTGCTCCCCCGCTGCCG
CCACGCCTTCCACCTCGACTGCGTCGATCGCTGGCTGCACTCCAGCGCCAGCTGCCCGCTCTGCCGCGCCCGCGTGCACC
CCGACGACGCCGACCTCGGCCTCAAGTACGCCGCAGCCAGCGCGCGCTTTGTCTTCGGCGCAGGCGACGACGCAGCCGCC
GTCGCTGCCGGCCCCGCGCCGTC------GTCCGGCCGCGACCTCCTCGCCGGCATCTTCGTCGAGCGCGTGCCGTCGGC
GCGCTTCGGTGG------------------------------CGATGCTGCTGATGACTCTAACACTA------AGCTGG
ACCGGCACCGGCACCGCATCGTGGTGTCGGACAGCGTGTTCAAGAGCCGGTGGAGCGACCTCAACTCGGCGGACCTCATC
GCGCTGGACACCGAGATGCTGCGCTCCGTCTCCAGCGGGCGCTTCCCCTACCCG------TATCCCGACGACGACATTAT
CTTGGTGGGAGAGGAGCAGGAGCACG---------A------------CCGAGACGATCACGACGGCGCCCGCATGTCCA
TTGAGATTCAGAAGAAGCGGCTGCTGGAGGTGGAGAGCGGGAGCGGCAGCAAGGGGTTG---------------GGACTG
GGAGGGTGCGGCGGGTCGGAGGCG---------------------GCGGCGTCGAGGCTGGTGTCGTCGGGCGTGCGGTC
CATGTCGGAGATGGTGCGGCTGCCTCGGGTGGCGGTAAGGGCGACGGAGGAGGAGGAGAGGGCGCGGCAGCGGTGGGTGC
CCATCGCGCGGCGGACGGCGCGGTGGTTCGCCGC------GAGGAGCAGGGAGGAGGA---------------------C
CGCCTCCGTGTGTAATG------TAATGTGAAGAAATTAAAAGATTAA-------------ATCAATCAATCAATCAATC
AATGAGTGAGTCAAAGATTAAATCAACCCAATCCAGT----GCTCAAGCTAGGCAAGCAGATGACAAAAAC---------
---------------------------------GGTGATCTCATCTTGCACCTCAACCTCAAGCCATGTATTGACTGTAT
GTATGTATGTATGTAT--GTACAATACAATTGTGCATATATAGGCTAGCAAGAAGCACAC----ATGCATGGAATTGCTA
GTTACTAC--TCCAGTTATTATACTGAAA--TGCCACAAAACTTTAGTAGAGAGAGAGAGAGAGAGAGAGAGATTCAAGC
TTGATCGCACGGCCAACGGCCAGGAGGAGGAAGGAGGATGGTCGTCTCCTTGTGTGTGTAAAGAAATGAAAATAAAGATG
GTAGAAACTATGACCGGCT---------------------------------------------CTATCAATCAATCAAT
CAATCAAGAAAGA------------------------------------------------------------------A
AGATTGATCACAGTGCACATCAAGC------GTAGCATCCAAAAGTCTTCTCCGGGTTGGGTTGGGTTGGG-----TTGG
TTGTAAAATCCTATTTCTCCTGG-----CCAATGACAAGTCTTCCCATGCATTTTACCGTCAAAAATAAAGAAATTTGAG
TTGAA----CATGATGATTCAATCTCTAATCAGTATTTACTAGTGTGTGCACCAAAATCATG----------------TC
ATGTGAGAAACCAATTGAAAAAATGATGCAATAATTGGTAGCCAGGTCTAACTGCTGCTGCTACTACATGTTAC------
------------TACATACATACATGAATGTATGTATGGGAAATATTATTTGGATGCAGCTCTCAGTCTCACCACTGAGC
CATGACTATGAGA---ATTAGTATATTAGACCGGCCAACGTGTGAGTCTGGCTACCTGGCAG-----------------G
CATGTGGTTGGCTGCTGCTGCTAGAGTTAGCATGTATGTATGTATGTATGCACAAACAGCAAGATTACAAATAGTTAATC
AACTTATAG-------------------------------------------------TTATTCAAACAAACAAAGAAAA
TAGGAGTAATCAAGTTGCTCAACCACCGCGGCAGTTGGAGCTTGATCAATGGCTGGCTGGAGCTGGAGCTGGA-------
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>chr5B_1255
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----------------------------------TGCCATCGACCGTTCGACCAAT------------------------
-----------------CGTACGTGGGCATGGCGAAAACCATGGTGCTCCTGCAGCTCTGCGCGACGATCGCGGCACAGG
CGCACGCGCAGGCGCTGACGCAGCTGGCAGCGGAGGAGACGCCGCCGGGGGCGGGCGTGAAGGTATCGTTCCGGCCTAGC
GTGGCCATCGTGGCGGGCATCTTCACCATGATCTTCTCCCTCACCTTCTTCCTCCTCATGTACGCCAAGTTCTGGCACCC
CGCCAACACGCCCCTCCTGCCGGCCACCACCACCGCCAGCCCGTTCTGCGGCACTGACCCTGCAACGGCC---------G
CTTTGGAGGAGGCGAGCGCCGGCGTGGGCAAGGCGGTCATCGAGTCGCTGCCCTTCTTCCGGTTCGCGGCGCTG-GCGGG
GCGCGGCAGGGGCTGGAGTGCGCCGTGTGCCTGGCCCGCTTCGACGATGCCGACCTGCTCCGCCTGCTCCCGCGCTGCCG
CCACGCCTTCCACCTCGACTGCGTCGACCGCTGGCTGCACTCCAGCGCCAGCTGCCCGCTCTGCCGCGCTCGCGTCCACC
CCGACGACGCCGACCTCGGCTTCAAGTACGCCGCCGCCAGCGCGCGATTCGTCTTGGGCGCAGGCGACGACGACGCCGCT
GTTGGTGCCGCCCCCGCGCCATC------ATCCGGCCGCGACCTCCTCACCGGCATCTTCGTCGAGCGCGTGCCGTCCTC
GCGCTTCGGTGA---------------------TGATGCTGATGCCACG------GATTCTTGTAAGAAGGTGGAGCTGG
ACCGGCACCGGCACCGCATCGTGGTGTCGGACAGTGTGTTCAAGAGCCGGTGGAGCGACCTCAACTCAGCGGACCTCATC
GCGCTGGACACCGAGATGCTGCGCTCCGTCTCCAGCGGCCGCTTCCCCTAGCTG------TACCC---------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS------S------------------S----------S-----------------
S-------S---------------------S------S------------------S-----------S-----------
--------------S---------------------------------S-------------------------------
-------------------------------------------------------------S--------S---------
--------------S---------------------------------------------------------S----S--
----------------S--SS-S-SSSSS-S--------------------S-----S-----SSSS-------------
--------------------------------S-----------------------------------------------
------------S----S--------S--S-S------------------------------------------------
------S-S--------------------------------------S---S---------------S-S-SSS------
------------------------------------------------S---------S---SS-SSSSSSSS-------
--SSSSS-------------------------------------------------------------------------
-----------------S--SSSS-S------------------------------S-SS-S-S-SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-----S--------------S--------------------------
---------------------S------------------S-------------------------------S----S--
----------------SS---S--------S-------------------------------------------------
--------------------------------------------------------------------------------
------------S------------------------------------S-S-----SS-SS-S--S-S-SS--S-S-S-
-S------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------SS-S---------SS--
--------S--SSSSS--S----SSSSSS------------------------------S--------------------
---------------------------------------------------S--------------S-------------
----------------------------S---------------------------------------------------
------------------------------------------------------SSSS----------------------
------------------S--S------SSSSSS-SSSSSSSSSSSSS----------S---------------------
-----------------------------------SSS---------------S-S-S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
----------------SSSSSSS------------S-----------SSSSS-SS-------------------------
-------S------S-S------S----------S---------------------------------------SS---S
SSS-S-SSSSSSSSSSSSS--S-------------------S--S--------------SS------------SS-----
SSS------------SSS----S---------------------S----S------------------------------
----------------------------------------------S----S-SSS-SS-SS-S-SSS-SSS-S-SS-SS
SS-----SS-SSS-S-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------S----------S------------
----------------------------S---S----------------------------------S-------S---S
-----------------S-----------------------------------SS-SS-S--S--S--------------
------------------------SS-SSS-------------S------------------------------S-----
----------------------------SSSSSS-SSSSS-----------------S----------------------
-------------------------------------------------------S-----------------SSSSSS-
----------SSSSSS-S--------------S-------------------------SSSSS-S---------------
-------S-----S---------------------------------S----------SSSSS---S-------------
-----------------------------------------------SSSSSSSSSS-----------------------
-S-S------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS
>forward_144
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--------------------------------------------GCCACTCTGCTCTGGTTGAA----------------
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>reverse_1355
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--------------------------------------------------------------------------GACCTG
GGCGACCACATAAA------------------------------------------------------------------
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>forward_1191
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---------------------------------------------------TTGTGATCGACGACCTCAGC---------
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>reverse_2849
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GGGCGCTGTCAATCAATCAG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_1385
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CCACATAAACCCGCCATCGA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_2965
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----AGTCCTTGCTTTGACGACGA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
